Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002376

Physical Location & Seq

Genomic Coordinates Forward (+)

28167274 .. 28173885

Gene Structure 6612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g26990.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3567 bp

ATGGCCTCCACCGAGCCGCCATGGCCTTCGCCACCAGGGCTTCCGGCGCCGCCGGAATCGAGCCGCTGCTGGAGCGGTATCACTTCCTTCGTGCCATATATAAGCACCACTGCAATGCGGAGGACGAGGTGCGTTTCCGCTATCAACATTGTACTGGTAATCTTTCCAGCTCTGGATATACGTGTGAAGAATGTGGCTCGAACTTACTCTCTCGAGCACGAAGGAGAGAGTGTTCTTTTTGATCAGTTGTTTGAGCTGCTAAACTCGAGTATGCAGAATGAGGAAAGCTACCGGAGAGAGTTGGCGTCGTGTACTGGAGCTCTTCAGACTTCAATCAGCCAGCATATGTCCAAGGAAGAGGAGCAGGTCTTCCCATTGCTTATTGAGAAGTATTCATGTGAAGAGCAGGCATTGTTGGTCTGGCAGTTTCTGTGTAGTATTCCTGTTAACATGATGGCAGAATTTCTTCCATGGCTCTCGTCCTCCATATCATGCGATGAACGTCAGGATATGCACAAGTACTTGAGCAAGGTGGTACCAGAAGAGAAGCTTCTGCAGCAGGTTGTATTTTCCTGGATGGAAGGGGTAAAAGCTTCTGCTTGCAGAGATAAATCGAAGGGTCAATTTCAAGATTCTGGAAAGAAGGTCCAGTGCTCATGTCAGTCGTCCAAGACTTGTAAAAGGAAACGTGTGGAGCTAAAATCTGAACATTCCAGTAGTATGTTAAATCCTATAGATGAAATGTTGCTTTGGCATAATGCTATAAAAAGAGAGTTGAACGACATAGCAGAGGCAGCCAAGAAGATACAACTTTCTGGTGATTTTTCTGATTTTTCTGCATTCAACAAGAGGTTGCAATTTATTGCAGAAGTTTGTATTTTTCATAGCATTGCTGAGGACAAGGTTATATTCCCTGCTCTAGATGCTGAACTGAATTTCGCTCAGGAGCATAGAGATGAAGAAATTCAATTTGACAAGCTTAGGCGCCTCATGGAAAGCATCCAGAGGGCAGGAGCTGAATCATCTACATCTGAATTTTATATGAAGTTGTGCTCTCACGCTGATCAGATAATAGATAGCATACTGAAACACTTCCAGAATGAGGAACTTCAGGTGCTTCCACTTGCCCGTAAGCATTTTAGCCCCAGAAGACAACGAGAACTTCTGTATCAAAGCTTATGTATGATGCCGTTGAAGTTGATTGAATGTGTCTTACCATGGTTCGTAGGCTCACTTACTGATGAGGAAGCAAGTTCCTTTCTTCAGAACATTTATATAGCAGCTCCAGCAACAGATTCAGCACTGGTCACTCTTTTTTCTGGGTGGGCATGCAAAGGTCGTTCCGCAAACATTTGTTTGTCTTCAAGTGCAATTGGTTGTTGCCCTGCAACAACACTGACTGGAAGTGAAAGAGTGATTAGCAAGAAACCATTATGTTTGTGCACCTCTATGTTTTCCACTAAGCAAAGGCCTTTATGCTTATCAACAGATGGAGAAGATGATAATCAAAGGCCATCCAAGTGTGTAAGTTTGGTGTCATCTGTGGAAACTATAGCAGGGCAGCCTATAGACAATGGAAATACCCTTCAAATATCCTGCAGTAAGACATGCTGTGTACCGGGGTTGGGGGTAAATGACAGTAACTTGAGAGTGGGTTCTCTGGCTGCAGTAAAAACTCTGCGTTCCATATCTTTTAATCCTTCAGCTCCTTCACTCAACTCCAGTCTTTTCAATTGGGAAACAGATTTCAGCTCTGCAGATACTAGTACTGGAACTCGACCTATTGATAACATATTCAAATTTCATAAAGCTATACGTAAAGATTTGGAGTATTTAGATATCGAATCTGGAAAGCTTAATGATTGTAACGAGACTTTTATCAGGCATTTTTCTGGTAGGTTTCGTCTGTTATGGGGTCTATATAGAGCTCATAGTAACGCGGAGGATGATATTGTATTCCCAGCATTGGAATCGAAAGAGACTCTTCATAATGTTAGCCATTCTTACACACTGGATCACAAGCAGGAAGAGAAACTGTTTGAGGATATTTTTTCTGTTCTCTCTGAGCTTGCACAACTTAGCGAATTCATGAGCATTAGACATATGTCTGGTGATTCAGGACAAAGTAATCGTGATTCTTTTGAGCATACTGATACTTTGAGAAAGTACAATGAGCTAGCCACAAAGCTTCAGGGAATGTGCAAATCCATTAGAGTGACATTGGATCAACATGTTTTCCGTGAAGAACTCGAGTTGTGGCCATTGTTTGATAAACACTTTTCTGTGGAAGAACAAGATAAAATTGTTGGTCGAATAATTGGTACTACAGGGGCGGAGGTTCTTCAATCAATGCTGCCATGGGTAACTGCTGCTCTTACTCTGGAAGAACAGAATAAATTGATGGACACATGGAAGCAGGCAACCAAAAATACTATGTTTAGTGAGTGGCTTGACGAATGGTGGGATGGAAGTCGCGCTGAATCTTCACATACAGTGAAACCAGAAAGCTGTCCTTCTATAGTTTCTGATGTGGATGCATATGCTAGCTTGGAACAGAGTGATGAAACATTTAAACCTGGATGGAAAGATATATTTCGGATGAATCAAAATGAGCTTGAATCAGAAATTAGAAAGGTTGCTCGAGATTCAACTCTTGATCCAAGAAGAAAAGCATATCTTATTCAAAATCTAGTGACTAGTCGCTGGATAGCTTCTCAGCAGAAATCACCTCAAGCAGGTGTACTTGAAGGTTCAGATGGTGAAGATTTGCTTGGATGTTCACCATCATTTCATGATTCAGAGAAAGAAGTGTTTGGCTGTAAGCATTACAAAAGAAATTGCAAAGTCCGTGCCAGTTGCTGTGGAAAACTATTTACATGCAGGTTTTGTCATGACGAAGTGAGCGACCATTCAATGGATAGGAAAGCTACATCTGAAATGATGTGTATGCGCTGCTTGAAGATTCAGCCTGTGGGACCAGTCTGTACAACGTCTTCCTGTGGTGGATTCCTGATGGCAAAGTACTATTGTAATATTTGCAAATTTTTTGATGATGAAAGGACGGTTTATCATTGTCCTTCTTGCAATTTATGCCGTGTTGGGAAGGGACTTGGTGTCGACTTTTTTCATTGCATGACATGCAATTGTTGTCTGGGGATGAAGTTGCTAGACCACAAATGTAGGGAGAAGGGCTTAGAAATAAACTGTCCCATTTGCTGTGACTTTCTGTTCACGTCAAGTGCAACTGTGAGAGCCCTTCCTTGTGGTCATTACATGCATTCAGCCTGCTTCCAGGCATACACTTGTAGTCACTACATTTGCCCAATCTGCAGCAAATCTTTGGGAGATATGGCGGTTTACTTTGGCATGCTTGATGCACTACTGGCTTCTGAGGAACTCCCAGAAGAATACAGGGATCGCTGTCAGGATATCCTGTGCAATGACTGTGATAAGAAGGGTACAGCACGGTTCCACTGGCTGTACCATAAGTGCGGCTCTTGTGGATCCTACAACACCAAAGTAATCCGGATGGATTCGACCTCCCACTGCTTAACATCAGGCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

1189

Amino Acids

134.2

Weight (kDa)

5.91

Isoelectric Point (pI)

56.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hemerythrin	PF01814	42 - 171	1.6e-10	Hemerythrin HHE cation binding domain
Hemerythrin	PF01814	288 - 420	3.7e-07	Hemerythrin HHE cation binding domain
zf-CHY	PF05495	984 - 1052	6.9e-19	CHY zinc finger
zf-RING_2	PF13639	1112 - 1154	2.1e-06	Ring finger domain
zinc_ribbon_6	PF14599	1160 - 1217	1.2e-23	Zinc-ribbon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18290
fragaria_vesca	FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_5g11860 FvH4_5g11860 FvH4_5g11860
malus_domestica	MD06G1217900.v1.1 MD14G1228100.v1.1 MD16G1039900.v1.1
prunus_persica	Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1
pyrus_communis	pycom06g19410 pycom14g18950 pycom16g03460
rosa_chinensis	RchiOBHm_Chr4g0434791 RchiOBHm_Chr7g0185731
rosa_laevigata	RLG00000004888 RLG00000006649
rosa_multiflora	Rmu_sc0000179.1_g000001 Rmu_sc0002952.1_g000002
rosa_roxburghii	Rroxscaffold_3G00268670 Rroxscaffold_5G00376000
rosa_rugosa	Rorug04G0278300 Rorug04G0278400 Rorug06G0470900
rosa_samantha	Rh4AG334900 Rh4CG357800 Rh4DG337300 Rh7AG071600 Rh7BG076200 Rh7DG076200
rosa_wichuraiana	Rw4G029200 Rw7G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2726
Acc36I	ACCTGC	4 cut(s)	355, 550, 2726, 2871
Acc65I	GGTACC	1 cut(s)	535
AccB1I	GGYRCC	3 cut(s)	46, 535, 984
AccB7I	CCANNNNNTGG	1 cut(s)	2914
AccBSI	CCGCTC	1 cut(s)	75
AccI	GTMKAC	1 cut(s)	3117
AccII	CGCG	2 cut(s)	1940, 2475
AccIII	TCCGGA	1 cut(s)	3525
AclWI	GGATC	6 cut(s)	2022, 2232, 2651, 3423, 3498, 3511
AcoI	YGGCCR	1 cut(s)	2258
AcsI	RAATTY	7 cut(s)	461, 934, 963, 1034, 1799, 2084, 3041
AcuI	CTGAAG	5 cut(s)	308, 1094, 1247, 1686, 2174
AcyI	GRCGYC	3 cut(s)	47, 305, 985
AfiI	CCNNNNNNNGG	5 cut(s)	1102, 1625, 1966, 2735, 2914
AflIII	ACRYGT	3 cut(s)	181, 688, 2230
AhdI	GACNNNNNGTC	1 cut(s)	3113
AhlI	ACTAGT	2 cut(s)	1763, 2696
AjiI	CACGTC	1 cut(s)	3234
AjnI	CCWGG	4 cut(s)	34, 572, 2575, 3291
AjuI	GAANNNNNNNTTGG	2 cut(s)	2754, 2786
AloI	GAACNNNNNNTCC	2 cut(s)	216, 248
Alw21I	GWGCWC	6 cut(s)	219, 322, 656, 1055, 1445, 1930
Alw26I	GTCTC	2 cut(s)	1865, 1973
Alw44I	GTGCAC	1 cut(s)	1441
AlwI	GGATC	6 cut(s)	2022, 2232, 2651, 3423, 3498, 3511
AlwNI	CAGNNNCTG	3 cut(s)	430, 1016, 2859
Ama87I	CYCGRG	4 cut(s)	212, 265, 2249, 2640
Aor13HI	TCCGGA	1 cut(s)	3525
AoxI	GGCC	5 cut(s)	3, 23, 1469, 1511, 2258
ApaLI	GTGCAC	1 cut(s)	1441
ApoI	RAATTY	7 cut(s)	461, 934, 963, 1034, 1799, 2084, 3041
Asp700I	GAANNNNTTC	3 cut(s)	465, 963, 1091
Asp718I	GGTACC	1 cut(s)	535
AspLEI	GCGC	4 cut(s)	49, 987, 2477, 2952
AspS9I	GGNCC	2 cut(s)	646, 2975
AsuC2I	CCSGG	1 cut(s)	1620
AsuHPI	GGTGA	5 cut(s)	830, 2123, 2718, 2771, 2772
AsuNHI	GCTAGC	2 cut(s)	2176, 2543
AvaI	CYCGRG	4 cut(s)	212, 265, 2249, 2640
AvaII	GGWCC	2 cut(s)	646, 2975
BaeGI	GKGCMC	1 cut(s)	1445
BaeI	ACNNNNGTAYC	2 cut(s)	1151, 1184
BalI	TGGCCA	1 cut(s)	2260
BamHI	GGATCC	1 cut(s)	3503
BanI	GGYRCC	3 cut(s)	46, 535, 984
BanII	GRGCYC	3 cut(s)	322, 1930, 3256
BarI	GAAGNNNNNNTAC	2 cut(s)	2977, 3009
BbsI	GAAGAC	4 cut(s)	361, 1156, 1353, 2985
Bbv12I	GWGCWC	6 cut(s)	219, 322, 656, 1055, 1445, 1930
BbvCI	CCTCAGC	1 cut(s)	894
BceAI	ACGGC	2 cut(s)	1174, 3078
BcgI	CGANNNNNNTGC	2 cut(s)	1953, 1987
BciT130I	CCWGG	4 cut(s)	36, 574, 2577, 3293
BclI	TGATCA	2 cut(s)	241, 1063
BcnI	CCSGG	1 cut(s)	1620
BcoDI	GTCTC	2 cut(s)	1865, 1973
BcuI	ACTAGT	2 cut(s)	1763, 2696
BfaI	CTAG	7 cut(s)	920, 1764, 2177, 2544, 2690, 2697, 3167
BfoI	RGCGCY	2 cut(s)	50, 988
BfuAI	ACCTGC	4 cut(s)	355, 550, 2726, 2871
BglI	GCCNNNNNGGC	2 cut(s)	22, 37
BmcAI	AGTACT	3 cut(s)	521, 1768, 3023
Bme1390I	CCNGG	5 cut(s)	36, 574, 1620, 2577, 3293
Bme18I	GGWCC	2 cut(s)	646, 2975
BmeRI	GACNNNNNGTC	1 cut(s)	3113
BmeT110I	CYCGRG	4 cut(s)	212, 265, 2249, 2640
BmgBI	CACGTC	1 cut(s)	3234
BmgT120I	GGNCC	2 cut(s)	646, 2975
BmiI	GGNNCC	6 cut(s)	48, 537, 986, 2976, 3470, 3505
BmrFI	CCNGG	5 cut(s)	36, 574, 1620, 2577, 3293
BmsI	GCATC	5 cut(s)	913, 1008, 1176, 2524, 3364
BmtI	GCTAGC	2 cut(s)	2180, 2547
BoxI	GACNNNNGTC	1 cut(s)	2104
BpiI	GAAGAC	4 cut(s)	361, 1156, 1353, 2985
BpmI	CTGGAG	4 cut(s)	91, 336, 1269, 1705
Bpu10I	CCTNAGC	3 cut(s)	894, 942, 980
BpuEI	CTTGAG	3 cut(s)	544, 1666, 2715
BpuMI	CCSGG	1 cut(s)	1620
BsaAI	YACGTR	2 cut(s)	182, 1817
BsaBI	GATNNNNATC	1 cut(s)	1503
BsaHI	GRCGYC	3 cut(s)	47, 305, 985
BsaJI	CCNNGG	7 cut(s)	20, 35, 351, 470, 1217, 1619, 2357
BsaWI	WCCGGW	2 cut(s)	291, 3525
BsaXI	ACNNNNNCTCC	2 cut(s)	216, 246
Bsc4I	CCNNNNNNNGG	5 cut(s)	1102, 1625, 1966, 2735, 2914
Bse3DI	GCAATG	5 cut(s)	120, 374, 888, 3127, 3445
Bse8I	GATNNNNATC	1 cut(s)	1503
BseAI	TCCGGA	1 cut(s)	3525
BseBI	CCWGG	4 cut(s)	36, 574, 2577, 3293
BseDI	CCNNGG	7 cut(s)	20, 35, 351, 470, 1217, 1619, 2357
BseJI	GATNNNNATC	1 cut(s)	1503
BseLI	CCNNNNNNNGG	5 cut(s)	1102, 1625, 1966, 2735, 2914
BseMI	GCAATG	5 cut(s)	120, 374, 888, 3127, 3445
BseMII	CTCAG	5 cut(s)	885, 956, 2055, 2729, 3381
BseRI	GAGGAG	1 cut(s)	374
BseSI	GKGCMC	1 cut(s)	1445
BseYI	CCCAGC	1 cut(s)	1960
Bsh1236I	CGCG	2 cut(s)	1940, 2475
BshFI	GGCC	5 cut(s)	5, 25, 1471, 1513, 2260
BshNI	GGYRCC	3 cut(s)	46, 535, 984
BsiHKAI	GWGCWC	6 cut(s)	219, 322, 656, 1055, 1445, 1930
BsiHKCI	CYCGRG	4 cut(s)	212, 265, 2249, 2640
BsiSI	CCGG	5 cut(s)	44, 53, 292, 1619, 3526
BslFI	GGGAC	3 cut(s)	2988, 3120, 3192
BslI	CCNNNNNNNGG	5 cut(s)	1102, 1625, 1966, 2735, 2914
BsmAI	GTCTC	2 cut(s)	1865, 1973
BsmFI	GGGAC	3 cut(s)	2988, 3120, 3192
BsmI	GAATGC	2 cut(s)	839, 3277
BsnI	GGCC	5 cut(s)	5, 25, 1471, 1513, 2260
BsoBI	CYCGRG	4 cut(s)	212, 265, 2249, 2640
Bsp1286I	GDGCHC	7 cut(s)	219, 322, 656, 1055, 1445, 1930, 3256
Bsp13I	TCCGGA	1 cut(s)	3525
Bsp1407I	TGTACA	1 cut(s)	2984
Bsp143I	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
Bsp19I	CCATGG	4 cut(s)	20, 470, 1217, 2357
BspANI	GGCC	5 cut(s)	5, 25, 1471, 1513, 2260
BspCNI	CTCAG	5 cut(s)	886, 955, 2056, 2728, 3382
BspEI	TCCGGA	1 cut(s)	3525
BspFNI	CGCG	2 cut(s)	1940, 2475
BspHI	TCATGA	3 cut(s)	2088, 2791, 2890
BspLI	GGNNCC	6 cut(s)	48, 537, 986, 2976, 3470, 3505
BspMAI	CTGCAG	5 cut(s)	558, 1601, 1669, 1759, 3332
BspMI	ACCTGC	4 cut(s)	355, 550, 2726, 2871
BspOI	GCTAGC	2 cut(s)	2180, 2547
BspPI	GGATC	6 cut(s)	2022, 2232, 2651, 3423, 3498, 3511
BspQI	GCTCTTC	2 cut(s)	327, 396
BspT107I	GGYRCC	3 cut(s)	46, 535, 984
BsrBI	CCGCTC	1 cut(s)	75
BsrDI	GCAATG	5 cut(s)	120, 374, 888, 3127, 3445
BsrGI	TGTACA	1 cut(s)	2984
BssECI	CCNNGG	7 cut(s)	20, 35, 351, 470, 1217, 1619, 2357
BssMI	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
BssNI	GRCGYC	3 cut(s)	47, 305, 985
BssT1I	CCWWGG	5 cut(s)	20, 351, 470, 1217, 2357
Bst2UI	CCWGG	4 cut(s)	36, 574, 2577, 3293
Bst4CI	ACNGT	8 cut(s)	1640, 2037, 2494, 3064, 3206, 3247, 3446, 3468
Bst6I	CTCTTC	6 cut(s)	327, 351, 396, 537, 1989, 2022
BstACI	GRCGYC	3 cut(s)	47, 305, 985
BstAPI	GCANNNNNTGC	2 cut(s)	3090, 3138
BstAUI	TGTACA	1 cut(s)	2984
BstBAI	YACGTR	2 cut(s)	182, 1817
BstDEI	CTNAG	9 cut(s)	894, 942, 980, 1461, 2064, 2078, 2715, 3193, 3390
BstDSI	CCRYGG	4 cut(s)	20, 470, 1217, 2357
BstENI	CCTNNNNNAGG	1 cut(s)	2733
BstFNI	CGCG	2 cut(s)	1940, 2475
BstH2I	RGCGCY	2 cut(s)	50, 988
BstHHI	GCGC	4 cut(s)	49, 987, 2477, 2952
BstKTI	GATC	7 cut(s)	244, 1066, 2017, 2227, 2659, 3418, 3506
BstMAI	GTCTC	2 cut(s)	1865, 1973
BstMBI	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
BstNI	CCWGG	4 cut(s)	36, 574, 2577, 3293
BstNSI	RCATGY	7 cut(s)	1332, 1611, 2234, 2880, 3141, 3277, 3370
BstPAI	GACNNNNGTC	1 cut(s)	2104
BstSCI	CCNGG	5 cut(s)	34, 572, 1618, 2575, 3291
BstSLI	GKGCMC	1 cut(s)	1445
BstSNI	TACGTA	1 cut(s)	1817
BstUI	CGCG	2 cut(s)	1940, 2475
BstV2I	GAAGAC	4 cut(s)	361, 1156, 1353, 2985
BstX2I	RGATCY	1 cut(s)	3503
BstYI	RGATCY	1 cut(s)	3503
BsuRI	GGCC	5 cut(s)	5, 25, 1471, 1513, 2260
BtgI	CCRYGG	4 cut(s)	20, 470, 1217, 2357
BtgZI	GCGATG	1 cut(s)	510
BtrI	CACGTC	1 cut(s)	3234
BtsI	GCAGTG	2 cut(s)	108, 3544
BtsIMutI	CAGTG	8 cut(s)	108, 656, 1301, 1394, 2009, 2499, 3472, 3544
BveI	ACCTGC	4 cut(s)	355, 550, 2726, 2871
CaiI	CAGNNNCTG	3 cut(s)	430, 1016, 2859
CciI	TCATGA	3 cut(s)	2088, 2791, 2890
CfoI	GCGC	4 cut(s)	49, 987, 2477, 2952
Cfr13I	GGNCC	2 cut(s)	646, 2975
CseI	GACGC	1 cut(s)	294
DdeI	CTNAG	9 cut(s)	894, 942, 980, 1461, 2064, 2078, 2715, 3193, 3390
DinI	GGCGCC	2 cut(s)	48, 986
DpnI	GATC	7 cut(s)	243, 1065, 2016, 2226, 2658, 3417, 3505
DpnII	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
DraI	TTTAAA	1 cut(s)	2572
DriI	GACNNNNNGTC	1 cut(s)	3113
EaeI	YGGCCR	1 cut(s)	2258
Eam1104I	CTCTTC	6 cut(s)	327, 351, 396, 537, 1989, 2022
Eam1105I	GACNNNNNGTC	1 cut(s)	3113
EarI	CTCTTC	6 cut(s)	327, 351, 396, 537, 1989, 2022
EciI	GGCGGA	1 cut(s)	2348
Ecl136II	GAGCTC	2 cut(s)	320, 1928
Eco105I	TACGTA	1 cut(s)	1817
Eco130I	CCWWGG	5 cut(s)	20, 351, 470, 1217, 2357
Eco147I	AGGCCT	1 cut(s)	1471
Eco24I	GRGCYC	3 cut(s)	322, 1930, 3256
Eco32I	GATATC	2 cut(s)	1840, 3430
Eco47I	GGWCC	2 cut(s)	646, 2975
Eco53kI	GAGCTC	2 cut(s)	320, 1928
Eco57I	CTGAAG	5 cut(s)	308, 1094, 1247, 1686, 2174
Eco88I	CYCGRG	4 cut(s)	212, 265, 2249, 2640
EcoICRI	GAGCTC	2 cut(s)	320, 1928
EcoNI	CCTNNNNNAGG	1 cut(s)	2733
EcoRI	GAATTC	1 cut(s)	2084
EcoRII	CCWGG	4 cut(s)	34, 572, 2575, 3291
EcoRV	GATATC	2 cut(s)	1840, 3430
EcoT14I	CCWWGG	5 cut(s)	20, 351, 470, 1217, 2357
EcoT22I	ATGCAT	2 cut(s)	2539, 3279
EcoT38I	GRGCYC	3 cut(s)	322, 1930, 3256
EgeI	GGCGCC	2 cut(s)	48, 986
EheI	GGCGCC	2 cut(s)	48, 986
ErhI	CCWWGG	5 cut(s)	20, 351, 470, 1217, 2357
FaqI	GGGAC	3 cut(s)	2988, 3120, 3192
FauNDI	CATATG	3 cut(s)	345, 2103, 2539
FbaI	TGATCA	2 cut(s)	241, 1063
FblI	GTMKAC	1 cut(s)	3117
FriOI	GRGCYC	3 cut(s)	322, 1930, 3256
FspBI	CTAG	7 cut(s)	920, 1764, 2177, 2544, 2690, 2697, 3167
GlaI	GCGC	4 cut(s)	48, 986, 2476, 2951
GsaI	CCCAGC	1 cut(s)	1964
GsuI	CTGGAG	4 cut(s)	91, 336, 1269, 1705
HaeII	RGCGCY	2 cut(s)	50, 988
HaeIII	GGCC	5 cut(s)	5, 25, 1471, 1513, 2260
HapII	CCGG	5 cut(s)	44, 53, 292, 1619, 3526
HgaI	GACGC	1 cut(s)	294
HhaI	GCGC	4 cut(s)	49, 987, 2477, 2952
Hin1I	GRCGYC	3 cut(s)	47, 305, 985
Hin6I	GCGC	4 cut(s)	47, 985, 2475, 2950
HinP1I	GCGC	4 cut(s)	47, 985, 2475, 2950
HincII	GTYRAC	2 cut(s)	448, 3118
HindII	GTYRAC	2 cut(s)	448, 3118
HindIII	AAGCTT	6 cut(s)	548, 591, 977, 1174, 1853, 2186
HpaI	GTTAAC	1 cut(s)	448
HpaII	CCGG	5 cut(s)	44, 53, 292, 1619, 3526
HphI	GGTGA	5 cut(s)	830, 2123, 2718, 2771, 2772
Hpy166II	GTNNAC	9 cut(s)	312, 448, 1443, 1616, 2741, 2780, 3118, 3231, 3358
Hpy8I	GTNNAC	9 cut(s)	312, 448, 1443, 1616, 2741, 2780, 3118, 3231, 3358
Hpy99I	CGWCG	1 cut(s)	310
HpyCH4III	ACNGT	8 cut(s)	1640, 2037, 2494, 3064, 3206, 3247, 3446, 3468
HpyCH4IV	ACGT	6 cut(s)	181, 502, 688, 1816, 2990, 3233
HpyF3I	CTNAG	9 cut(s)	894, 942, 980, 1461, 2064, 2078, 2715, 3193, 3390
HpySE526I	ACGT	6 cut(s)	181, 502, 688, 1816, 2990, 3233
Hsp92I	GRCGYC	3 cut(s)	47, 305, 985
HspAI	GCGC	4 cut(s)	47, 985, 2475, 2950
KasI	GGCGCC	2 cut(s)	46, 984
Kpn2I	TCCGGA	1 cut(s)	3525
KpnI	GGTACC	1 cut(s)	539
Ksp22I	TGATCA	2 cut(s)	241, 1063
KspAI	GTTAAC	1 cut(s)	448
Kzo9I	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
LguI	GCTCTTC	2 cut(s)	327, 396
LmnI	GCTCC	8 cut(s)	72, 317, 361, 694, 946, 1013, 1288, 1711
LweI	GCATC	5 cut(s)	913, 1008, 1176, 2524, 3364
MaeI	CTAG	7 cut(s)	920, 1764, 2177, 2544, 2690, 2697, 3167
MaeII	ACGT	6 cut(s)	181, 502, 688, 1816, 2990, 3233
MaeIII	GTNAC	9 cut(s)	1306, 1640, 1865, 1934, 2215, 2362, 2692, 3218, 3308
MalI	GATC	7 cut(s)	243, 1065, 2016, 2226, 2658, 3417, 3505
MbiI	CCGCTC	1 cut(s)	75
MboI	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
MfeI	CAATTG	3 cut(s)	1371, 1732, 3142
MflI	RGATCY	1 cut(s)	3503
MhlI	GDGCHC	7 cut(s)	219, 322, 656, 1055, 1445, 1930, 3256
MlsI	TGGCCA	1 cut(s)	2260
MluNI	TGGCCA	1 cut(s)	2260
Mly113I	GGCGCC	2 cut(s)	47, 985
MlyI	GAGTC	1 cut(s)	1975
Mox20I	TGGCCA	1 cut(s)	2260
Mph1103I	ATGCAT	2 cut(s)	2539, 3279
MroI	TCCGGA	1 cut(s)	3525
MroXI	GAANNNNTTC	3 cut(s)	465, 963, 1091
MscI	TGGCCA	1 cut(s)	2260
MseI	TTAA	6 cut(s)	447, 725, 1695, 1857, 2571, 3551
MslI	CAYNNNNRTG	5 cut(s)	113, 954, 1448, 1519, 2213
Msp20I	TGGCCA	1 cut(s)	2260
MspA1I	CMGCKG	1 cut(s)	66
MspI	CCGG	5 cut(s)	44, 53, 292, 1619, 3526
MspR9I	CCNGG	5 cut(s)	36, 574, 1620, 2577, 3293
MunI	CAATTG	3 cut(s)	1371, 1732, 3142
Mva1269I	GAATGC	2 cut(s)	839, 3277
MvaI	CCWGG	4 cut(s)	36, 574, 2577, 3293
MvnI	CGCG	2 cut(s)	1940, 2475
NarI	GGCGCC	2 cut(s)	47, 985
NciI	CCSGG	1 cut(s)	1620
NcoI	CCATGG	4 cut(s)	20, 470, 1217, 2357
NdeI	CATATG	3 cut(s)	345, 2103, 2539
NdeII	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
NheI	GCTAGC	2 cut(s)	2176, 2543
NlaIV	GGNNCC	6 cut(s)	48, 537, 986, 2976, 3470, 3505
NmuCI	GTSAC	5 cut(s)	1306, 2215, 2692, 3218, 3308
NsiI	ATGCAT	2 cut(s)	2539, 3279
NspI	RCATGY	7 cut(s)	1332, 1611, 2234, 2880, 3141, 3277, 3370
PaeI	GCATGC	2 cut(s)	1332, 3370
PaeR7I	CTCGAG	4 cut(s)	212, 265, 2249, 2640
PagI	TCATGA	3 cut(s)	2088, 2791, 2890
PaqCI	CACCTGC	1 cut(s)	2726
PceI	AGGCCT	1 cut(s)	1471
PciI	ACATGT	1 cut(s)	2230
PciSI	GCTCTTC	2 cut(s)	327, 396
PcsI	WCGNNNNNNNCGW	1 cut(s)	2901
PctI	GAATGC	2 cut(s)	839, 3277
PdmI	GAANNNNTTC	3 cut(s)	465, 963, 1091
PflMI	CCANNNNNTGG	1 cut(s)	2914
PfoI	TCCNGGA	1 cut(s)	572
PleI	GAGTC	1 cut(s)	1975
PluTI	GGCGCC	2 cut(s)	50, 988
PpsI	GAGTC	1 cut(s)	1975
Ppu21I	YACGTR	2 cut(s)	182, 1817
PscI	ACATGT	1 cut(s)	2230
PshAI	GACNNNNGTC	1 cut(s)	2104
Psp124BI	GAGCTC	2 cut(s)	322, 1930
Psp6I	CCWGG	4 cut(s)	34, 572, 2575, 3291
PspFI	CCCAGC	1 cut(s)	1960
PspGI	CCWGG	4 cut(s)	34, 572, 2575, 3291
PspN4I	GGNNCC	6 cut(s)	48, 537, 986, 2976, 3470, 3505
PspPI	GGNCC	2 cut(s)	646, 2975
PspXI	VCTCGAGB	2 cut(s)	265, 2249
PstI	CTGCAG	5 cut(s)	558, 1601, 1669, 1759, 3332
PstNI	CAGNNNCTG	3 cut(s)	430, 1016, 2859
PsuI	RGATCY	1 cut(s)	3503
RseI	CAYNNNNRTG	5 cut(s)	113, 954, 1448, 1519, 2213
SacI	GAGCTC	2 cut(s)	322, 1930
SalI	GTCGAC	1 cut(s)	3116
SapI	GCTCTTC	2 cut(s)	327, 396
SaqAI	TTAA	6 cut(s)	447, 725, 1695, 1857, 2571, 3551
Sau3AI	GATC	7 cut(s)	241, 1063, 2014, 2224, 2656, 3415, 3503
Sau96I	GGNCC	2 cut(s)	646, 2975
ScaI	AGTACT	3 cut(s)	521, 1768, 3023
SchI	GAGTC	1 cut(s)	1975
ScrFI	CCNGG	5 cut(s)	36, 574, 1620, 2577, 3293
SduI	GDGCHC	7 cut(s)	219, 322, 656, 1055, 1445, 1930, 3256
SfaNI	GCATC	5 cut(s)	913, 1008, 1176, 2524, 3364
SfoI	GGCGCC	2 cut(s)	48, 986
Sfr274I	CTCGAG	4 cut(s)	212, 265, 2249, 2640
SinI	GGWCC	2 cut(s)	646, 2975
SlaI	CTCGAG	4 cut(s)	212, 265, 2249, 2640
SmiMI	CAYNNNNRTG	5 cut(s)	113, 954, 1448, 1519, 2213
SmlI	CTYRAG	7 cut(s)	212, 265, 523, 1645, 2249, 2640, 2730
SmoI	CTYRAG	7 cut(s)	212, 265, 523, 1645, 2249, 2640, 2730
SnaBI	TACGTA	1 cut(s)	1817
SpeI	ACTAGT	2 cut(s)	1763, 2696
SphI	GCATGC	2 cut(s)	1332, 3370
SseBI	AGGCCT	1 cut(s)	1471
SspDI	GGCGCC	2 cut(s)	46, 984
SspI	AATATT	1 cut(s)	3034
SspMI	CTAG	7 cut(s)	920, 1764, 2177, 2544, 2690, 2697, 3167
SstI	GAGCTC	2 cut(s)	322, 1930
StuI	AGGCCT	1 cut(s)	1471
StyD4I	CCNGG	5 cut(s)	34, 572, 1618, 2575, 3291
StyI	CCWWGG	5 cut(s)	20, 351, 470, 1217, 2357
TaaI	ACNGT	8 cut(s)	1640, 2037, 2494, 3064, 3206, 3247, 3446, 3468
TaiI	ACGT	6 cut(s)	184, 505, 691, 1819, 2993, 3236
TatI	WGTACW	8 cut(s)	151, 311, 519, 1766, 2166, 2740, 2984, 3021
TauI	GCSGC	4 cut(s)	19, 52, 66, 3495
Tru1I	TTAA	6 cut(s)	447, 725, 1695, 1857, 2571, 3551
Tru9I	TTAA	6 cut(s)	447, 725, 1695, 1857, 2571, 3551
TscAI	CASTG	8 cut(s)	115, 656, 1308, 1401, 2016, 2499, 3479, 3551
TseFI	GTSAC	5 cut(s)	1306, 2215, 2692, 3218, 3308
Tsp45I	GTSAC	5 cut(s)	1306, 2215, 2692, 3218, 3308
TspGWI	ACGGA	2 cut(s)	2228, 2837
TspRI	CASTG	8 cut(s)	115, 656, 1308, 1401, 2016, 2499, 3479, 3551
Van91I	CCANNNNNTGG	1 cut(s)	2914
VneI	GTGCAC	1 cut(s)	1441
VpaK11BI	GGWCC	2 cut(s)	646, 2975
XagI	CCTNNNNNAGG	1 cut(s)	2733
XapI	RAATTY	7 cut(s)	461, 934, 963, 1034, 1799, 2084, 3041
XbaI	TCTAGA	1 cut(s)	919
XceI	RCATGY	7 cut(s)	1332, 1611, 2234, 2880, 3141, 3277, 3370
XhoI	CTCGAG	4 cut(s)	212, 265, 2249, 2640
XmiI	GTMKAC	1 cut(s)	3117
XmnI	GAANNNNTTC	3 cut(s)	465, 963, 1091
XspI	CTAG	7 cut(s)	920, 1764, 2177, 2544, 2690, 2697, 3167
ZrmI	AGTACT	3 cut(s)	521, 1768, 3023
Zsp2I	ATGCAT	2 cut(s)	2539, 3279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.