Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0013837

Physical Location & Seq

Genomic Coordinates Forward (+)

9795178 .. 9798604

Gene Structure 3427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17170.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGCGCGGGAGTTACCGTTTGAGACAGTTGCAGCACCGCAGCTTCTGCTCACGCTCATCAGCCAAAACCCATCAACCCATCAACATCAGCTTTGGAAATCCCAGTAACCCAAACCCAATCCCATGGAAGAAGAAACAGACCCAGAAGCCGAAGAAGGGTAGATCATCAAATGCTTCAGACCCAGAAGTTGTGAAATTCAATATGGAAATCAGTACCCAAATGCGCAATGGCCAATGCGGAGAGGCCCTTCGTGTGTTTAACGCAATGCCGCGGAGGAGCTCGGTTTCTTACAACGCTATGATATCTGGGTACTTGGCAAATGGCAGGTTTGATGATGCAAAGGACCTGTTTGACAAAATGCCTGAGAGAGACTTGGTGTCTTGGAATGTGATGCTTAGTGGGTTTGTGAGGAATAAGGATCTTGGTGGGGCACGTGCTTTGTTTGAACGTATGAAGGAAAGGGATGTTGTTTCTTGGAATGCTATTTTATCTGGGTATGCCCAGAATGGTTATGTTGATGAGGCCAGGAAGGTTTTCGAGATGATGCCGTGTAGGAATGAGATATCATGGAATGGGTTGCTTGCGGCTTATGTGCAGAATGGGAAGGTAGAGAGTGCTAGAAGGTTGTTTGAGTCGAAAGCGGATTGGCAGGCAGTGTCTTGGAATTGTTTGATGGGGGGATTTGTGAAACAGAAGAGGTTAGTTGAGGCTAGGCAGCTTTTCGACAGGATGCCTGCGAGGGATGAGGTTTCGTGGAATACTATGATCACGGGGTATGCACAGAATGGGGGGATGTCAGAGGCAAGGAGATTGTTTGAGGAGTCTCCTGTGAGGGATGTGTTTGCTTGGACAGCAATGCTTTCGGGTTATGTGCAGAATGGGATGTTGGATGAAGCAAGACGGATTTTTGATGAGATGCCGGAGAAGAATTCGGTTTCATGGAATGCAATGATTGCAGGGTATGTGCAGTGCAAGAGAATGGACATGGCGATGAAGTTGTTTGAGGCAATGCCTTGTAAGAATGTGAGTTCTTGGAATACTATATTGACTGGCTATGCTCAGAGCGGCGATATTGATGGTGCTAGGAAGGTCTTTGATAGCATGCCTCAGCGTGATTCCATCTCTTGGGCAGCTATCATTGCTGGCCATGCTCAGAATGGTTTTAGTGAAGAGGCTTTACGTCTATTTGTGGAAATGAAAAGAGATGGGGAAAGGCTGACTAGGTCTTCGTTTTCGTGTGCCTTGAGCACATGTGCTGAAGTTGCTGCTTTAGAGTTAGGGAAGCAATTACATGGGCGTTTAGCAAAAGCAGGATTCGAAAGTGGGTGCTATGTGGGGAATGCACTCCTTGGAATGTACTGCAAGTGTGGATGCATAGAGGAAGCATATGATGTGTTCCAAGAAATATCTGAAAAGGATGTTGTCTCATGGAACACAATGATCCATGGCTATGCAAGACATGGATTTGGCTCAAAAGCTCTCATGGTTTTTGATTTAATGAAGGCAGCTGGTATTAAACCTGATGAAGTAACAATGGTGGGTGTGTTGTCTGCTTGTAGTCATACTGGCCTTGTTGATAGGGGCAGAGAATACTTCCATTCAATGAATTGGGAATATGGCATCACAGCAAATCCAAAACACTATACCTGCCTGATTGATCTTTTAGGTAGAGCTGGGCGCCTGGAAGAAGCTCAGAATTTAATGAAAACGATGCCTTTTGAACCAGATGCTGCAACATGGGGAGCTCTACTTGGCGCAAGCCGCATTCATGGCAATACAGTATTAGGAGAAAAGGCTGCTAAGATAATTTTCGAGATGGAACCTGAAAATGCAGGAATGTATGTTCTTCTCTCAAATTTATATGCTTCTTCGGGCAGATGGGGTGATGTTGGTAAAATGAGATTGAAAATGAGGGATATAGGCGTCAGGAAAGTTCCTGGATATAGCTGGATTGAAGTGCAAAACAAGATTCACACATTTTCAGTTGGGGACTCTGTACACCCAGAGAAGGACAATATATATGCCTTCTTGGAAGAGTTGGATTTGAAAATGAAGCGAGAGGGATATGTTTCATCTACAAAGTTAGTTTTGCATGACGTTGAAGAGGAGGAGAAAGAGCACATGCTGAGGCATCACAGTGAGAAATTGGCTGTGGCATTTGGGATTCTTTCAATTCCAGCAGGGAGGCCGATCCGTGTAATGAAAAACTTGCGAGTATGTGAAGACTGCCACAATGCCATCAAATACATATCTAAGATTGTGGGAAGGACTATAATCTTAAGGGATTCTAACCGCTTCCACCACTTCAGTGAGGGTTCTTGTTCTTGCGGGGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

781

Amino Acids

88.01

Weight (kDa)

8.74

Isoelectric Point (pI)

44.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	93 - 123	6.3e-08	PPR repeat family
PPR	PF01535	95 - 124	1.1e-08	PPR repeat
PPR	PF01535	126 - 156	1.4e-06	PPR repeat
PPR_2	PF13041	154 - 186	3.8e-07	PPR repeat family
PPR_1	PF12854	154 - 182	1.2e-06	PPR repeat
PPR	PF01535	157 - 185	1.5e-07	PPR repeat
PPR	PF01535	250 - 274	2.8e-06	PPR repeat
PPR_2	PF13041	278 - 310	6.1e-07	PPR repeat family
PPR	PF01535	282 - 310	1.3e-08	PPR repeat
PPR_2	PF13041	309 - 343	3.6e-08	PPR repeat family
PPR	PF01535	312 - 341	3e-07	PPR repeat
PPR_2	PF13041	340 - 371	6.1e-06	PPR repeat family
PPR	PF01535	344 - 371	8.9e-06	PPR repeat
PPR	PF01535	374 - 403	8.3e-06	PPR repeat
PPR_2	PF13041	472 - 520	1.8e-12	PPR repeat family
PPR	PF01535	475 - 505	8e-09	PPR repeat
E_motif	PF20431	590 - 652	6.7e-20	E motif
DYW_deaminase	PF14432	688 - 780	3.8e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02750
fragaria_vesca	FvH4_5g17170 FvH4_5g17170 FvH4_5g17170
malus_domestica	MD06G1230200.v1.1
prunus_persica	Prupe.5G231300_v2.0.a1
pyrus_communis	pycom06g20140
rosa_chinensis	RchiOBHm_Chr7g0178631
rosa_laevigata	RLG00000005428
rosa_multiflora	Rmu_sc0002320.1_g000006
rosa_rugosa	Rorug06G0418500 Rorug06G0418600 Rorug07G0253600
rosa_samantha	Rh7AG017300 Rh7BG016900 Rh7DG017500
rosa_wichuraiana	Rw7G001400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	224
Acc36I	ACCTGC	2 cut(s)	315, 1655
AccB1I	GGYRCC	1 cut(s)	1677
AccB7I	CCANNNNNTGG	1 cut(s)	1125
AccBSI	CCGCTC	1 cut(s)	1065
AccII	CGCG	2 cut(s)	6, 271
AclWI	GGATC	3 cut(s)	426, 1435, 2185
AcoI	YGGCCR	2 cut(s)	229, 1144
AcsI	RAATTY	4 cut(s)	194, 928, 1696, 1855
AcuI	CTGAAG	3 cut(s)	159, 1278, 2290
AcvI	CACGTG	1 cut(s)	434
AcyI	GRCGYC	2 cut(s)	1678, 1923
AfaI	GTAC	4 cut(s)	214, 311, 1358, 1998
AfiI	CCNNNNNNNGG	3 cut(s)	155, 1125, 2008
AflII	CTTAAG	1 cut(s)	2278
AflIII	ACRYGT	1 cut(s)	1250
AgsI	TTSAA	9 cut(s)	199, 446, 1602, 1721, 1906, 1955, 2047, 2102, 2172
AhdI	GACNNNNNGTC	1 cut(s)	376
AjnI	CCWGG	3 cut(s)	524, 1680, 1936
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
AleI	CACNNNNGTG	1 cut(s)	2307
AloI	GAACNNNNNNTCC	2 cut(s)	1827, 1859
Alw21I	GWGCWC	4 cut(s)	281, 1250, 1747, 2121
Alw26I	GTCTC	4 cut(s)	16, 363, 828, 1429
AlwI	GGATC	3 cut(s)	426, 1435, 2185
AlwNI	CAGNNNCTG	2 cut(s)	45, 1730
AoxI	GGCC	6 cut(s)	229, 243, 522, 1144, 1567, 2186
ApeKI	GCWGC	8 cut(s)	31, 39, 715, 1130, 1265, 1505, 1730, 1796
ApoI	RAATTY	4 cut(s)	194, 928, 1696, 1855
ArsI	GACNNNNNNTTYG	2 cut(s)	1210, 1242
Asp700I	GAANNNNTTC	1 cut(s)	533
AspLEI	GCGC	4 cut(s)	6, 225, 1680, 1757
AspS9I	GGNCC	2 cut(s)	244, 343
AsuHPI	GGTGA	1 cut(s)	1895
AsuII	TTCGAA	1 cut(s)	1317
AvaII	GGWCC	1 cut(s)	343
BaeGI	GKGCMC	1 cut(s)	433
BalI	TGGCCA	2 cut(s)	231, 1146
BanI	GGYRCC	1 cut(s)	1677
BanII	GRGCYC	2 cut(s)	281, 1747
BarI	GAAGNNNNNNTAC	2 cut(s)	1161, 1193
BbrPI	CACGTG	1 cut(s)	434
BbsI	GAAGAC	2 cut(s)	1218, 2229
Bbv12I	GWGCWC	4 cut(s)	281, 1250, 1747, 2121
BbvCI	CCTCAGC	2 cut(s)	1107, 2126
BbvI	GCAGC	8 cut(s)	43, 51, 727, 1142, 1252, 1517, 1717, 1783
BccI	CCATC	9 cut(s)	78, 86, 667, 1070, 1127, 1199, 1810, 1872, 2246
BceAI	ACGGC	1 cut(s)	532
BcgI	CGANNNNNNTGC	2 cut(s)	843, 877
BciT130I	CCWGG	3 cut(s)	526, 1682, 1938
BclI	TGATCA	1 cut(s)	765
BcoDI	GTCTC	4 cut(s)	16, 363, 828, 1429
BfaI	CTAG	4 cut(s)	618, 711, 1083, 1221
BfoI	RGCGCY	1 cut(s)	1681
BfrI	CTTAAG	1 cut(s)	2278
BfuAI	ACCTGC	2 cut(s)	315, 1655
Bme1390I	CCNGG	3 cut(s)	526, 1682, 1938
Bme18I	GGWCC	1 cut(s)	343
BmeRI	GACNNNNNGTC	1 cut(s)	376
BmgT120I	GGNCC	2 cut(s)	244, 343
BmiI	GGNNCC	2 cut(s)	1679, 1821
BmrFI	CCNGG	3 cut(s)	526, 1682, 1938
BmrI	ACTGGG	1 cut(s)	96
BmuI	ACTGGG	1 cut(s)	96
BpiI	GAAGAC	2 cut(s)	1218, 2229
Bpu10I	CCTNAGC	2 cut(s)	1107, 2126
Bpu14I	TTCGAA	1 cut(s)	1317
BpuEI	CTTGAG	1 cut(s)	1264
BsaAI	YACGTR	1 cut(s)	434
BsaHI	GRCGYC	2 cut(s)	1678, 1923
BsaJI	CCNNGG	4 cut(s)	122, 269, 1348, 1444
BsaXI	ACNNNNNCTCC	1 cut(s)	31
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 1125, 2008
Bse1I	ACTGG	3 cut(s)	102, 1054, 1570
Bse3DI	GCAATG	6 cut(s)	232, 270, 861, 954, 1014, 1137
BseBI	CCWGG	3 cut(s)	526, 1682, 1938
BseDI	CCNNGG	4 cut(s)	122, 269, 1348, 1444
BseGI	GGATG	9 cut(s)	469, 735, 748, 798, 841, 888, 895, 1376, 1423
BseLI	CCNNNNNNNGG	3 cut(s)	155, 1125, 2008
BseMI	GCAATG	6 cut(s)	232, 270, 861, 954, 1014, 1137
BseMII	CTCAG	6 cut(s)	354, 1073, 1121, 1166, 1706, 2117
BseNI	ACTGG	3 cut(s)	102, 1054, 1570
BseRI	GAGGAG	4 cut(s)	289, 833, 2120, 2123
BseSI	GKGCMC	1 cut(s)	433
BseXI	GCAGC	8 cut(s)	43, 51, 727, 1142, 1252, 1517, 1717, 1783
BseYI	CCCAGC	1 cut(s)	1673
BsgI	GTGCAG	3 cut(s)	614, 893, 986
Bsh1236I	CGCG	2 cut(s)	6, 271
BshFI	GGCC	6 cut(s)	231, 245, 524, 1146, 1569, 2188
BshNI	GGYRCC	1 cut(s)	1677
BsiHKAI	GWGCWC	4 cut(s)	281, 1250, 1747, 2121
BsiSI	CCGG	1 cut(s)	920
BslFI	GGGAC	1 cut(s)	2003
BslI	CCNNNNNNNGG	3 cut(s)	155, 1125, 2008
BsmAI	GTCTC	4 cut(s)	16, 363, 828, 1429
BsmFI	GGGAC	1 cut(s)	2003
BsmI	GAATGC	4 cut(s)	484, 949, 1345, 1764
BsnI	GGCC	6 cut(s)	231, 245, 524, 1146, 1569, 2188
Bsp119I	TTCGAA	1 cut(s)	1317
Bsp1286I	GDGCHC	5 cut(s)	281, 433, 1250, 1747, 2121
Bsp1407I	TGTACA	1 cut(s)	1996
Bsp143I	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
Bsp19I	CCATGG	2 cut(s)	122, 1444
BspANI	GGCC	6 cut(s)	231, 245, 524, 1146, 1569, 2188
BspCNI	CTCAG	6 cut(s)	355, 1072, 1120, 1165, 1705, 2118
BspFNI	CGCG	2 cut(s)	6, 271
BspLI	GGNNCC	2 cut(s)	1679, 1821
BspMI	ACCTGC	2 cut(s)	315, 1655
BspPI	GGATC	3 cut(s)	426, 1435, 2185
BspT104I	TTCGAA	1 cut(s)	1317
BspT107I	GGYRCC	1 cut(s)	1677
BspTI	CTTAAG	1 cut(s)	2278
BsrBI	CCGCTC	1 cut(s)	1065
BsrDI	GCAATG	6 cut(s)	232, 270, 861, 954, 1014, 1137
BsrGI	TGTACA	1 cut(s)	1996
BsrI	ACTGG	3 cut(s)	102, 1054, 1570
BssECI	CCNNGG	4 cut(s)	122, 269, 1348, 1444
BssMI	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
BssNI	GRCGYC	2 cut(s)	1678, 1923
BssT1I	CCWWGG	3 cut(s)	122, 1348, 1444
Bst2UI	CCWGG	3 cut(s)	526, 1682, 1938
Bst4CI	ACNGT	4 cut(s)	17, 27, 1780, 2138
Bst6I	CTCTTC	4 cut(s)	689, 1164, 2028, 2097
BstACI	GRCGYC	2 cut(s)	1678, 1923
BstAFI	CTTAAG	1 cut(s)	2278
BstAPI	GCANNNNNTGC	2 cut(s)	45, 953
BstAUI	TGTACA	1 cut(s)	1996
BstBAI	YACGTR	1 cut(s)	434
BstBI	TTCGAA	1 cut(s)	1317
BstC8I	GCNNGC	6 cut(s)	582, 651, 735, 1103, 1144, 1759
BstDEI	CTNAG	9 cut(s)	363, 395, 1059, 1107, 1152, 1692, 1800, 2126, 2253
BstDSI	CCRYGG	3 cut(s)	122, 269, 1444
BstF5I	GGATG	9 cut(s)	469, 735, 748, 798, 841, 888, 895, 1376, 1423
BstFNI	CGCG	2 cut(s)	6, 271
BstH2I	RGCGCY	1 cut(s)	1681
BstHHI	GCGC	4 cut(s)	6, 225, 1680, 1757
BstKTI	GATC	6 cut(s)	164, 421, 768, 1443, 1660, 2193
BstMAI	GTCTC	4 cut(s)	16, 363, 828, 1429
BstMBI	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 851, 953, 1139, 1148, 1262, 1761, 1770
BstNI	CCWGG	3 cut(s)	526, 1682, 1938
BstNSI	RCATGY	3 cut(s)	1105, 1254, 2125
BstSCI	CCNGG	3 cut(s)	524, 1680, 1936
BstSLI	GKGCMC	1 cut(s)	433
BstUI	CGCG	2 cut(s)	6, 271
BstV1I	GCAGC	8 cut(s)	43, 51, 727, 1142, 1252, 1517, 1717, 1783
BstV2I	GAAGAC	2 cut(s)	1218, 2229
BstX2I	RGATCY	1 cut(s)	418
BstXI	CCANNNNNNTGG	1 cut(s)	123
BstYI	RGATCY	1 cut(s)	418
BsuRI	GGCC	6 cut(s)	231, 245, 524, 1146, 1569, 2188
BtgI	CCRYGG	3 cut(s)	122, 269, 1444
BtgZI	GCGATG	1 cut(s)	1004
BtsCI	GGATG	9 cut(s)	469, 735, 748, 798, 841, 888, 895, 1376, 1423
BtsI	GCAGTG	2 cut(s)	660, 974
BtsIMutI	CAGTG	4 cut(s)	660, 974, 2143, 2314
BveI	ACCTGC	2 cut(s)	315, 1655
Cac8I	GCNNGC	6 cut(s)	582, 651, 735, 1103, 1144, 1759
CaiI	CAGNNNCTG	2 cut(s)	45, 1730
CfoI	GCGC	4 cut(s)	6, 225, 1680, 1757
Cfr13I	GGNCC	2 cut(s)	244, 343
Cfr42I	CCGCGG	1 cut(s)	272
CseI	GACGC	1 cut(s)	1912
Csp6I	GTAC	4 cut(s)	213, 310, 1357, 1997
CviQI	GTAC	4 cut(s)	213, 310, 1357, 1997
DdeI	CTNAG	9 cut(s)	363, 395, 1059, 1107, 1152, 1692, 1800, 2126, 2253
DinI	GGCGCC	1 cut(s)	1679
DpnI	GATC	6 cut(s)	163, 420, 767, 1442, 1659, 2192
DpnII	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
DriI	GACNNNNNGTC	1 cut(s)	376
EaeI	YGGCCR	2 cut(s)	229, 1144
Eam1104I	CTCTTC	4 cut(s)	689, 1164, 2028, 2097
Eam1105I	GACNNNNNGTC	1 cut(s)	376
EarI	CTCTTC	4 cut(s)	689, 1164, 2028, 2097
Ecl136II	GAGCTC	2 cut(s)	279, 1745
Eco130I	CCWWGG	3 cut(s)	122, 1348, 1444
Eco24I	GRGCYC	2 cut(s)	281, 1747
Eco32I	GATATC	2 cut(s)	303, 564
Eco47I	GGWCC	1 cut(s)	343
Eco53kI	GAGCTC	2 cut(s)	279, 1745
Eco57I	CTGAAG	3 cut(s)	159, 1278, 2290
Eco72I	CACGTG	1 cut(s)	434
EcoICRI	GAGCTC	2 cut(s)	279, 1745
EcoO109I	RGGNCCY	2 cut(s)	244, 343
EcoRI	GAATTC	1 cut(s)	928
EcoRII	CCWGG	3 cut(s)	524, 1680, 1936
EcoRV	GATATC	2 cut(s)	303, 564
EcoT14I	CCWWGG	3 cut(s)	122, 1348, 1444
EcoT22I	ATGCAT	1 cut(s)	1376
EcoT38I	GRGCYC	2 cut(s)	281, 1747
EgeI	GGCGCC	1 cut(s)	1679
EheI	GGCGCC	1 cut(s)	1679
ErhI	CCWWGG	3 cut(s)	122, 1348, 1444
FaqI	GGGAC	1 cut(s)	2003
FauI	CCCGC	1 cut(s)	2321
FauNDI	CATATG	1 cut(s)	1387
FbaI	TGATCA	1 cut(s)	765
FokI	GGATG	9 cut(s)	476, 742, 755, 805, 848, 895, 902, 1383, 1430
FriOI	GRGCYC	2 cut(s)	281, 1747
FspBI	CTAG	4 cut(s)	618, 711, 1083, 1221
FspI	TGCGCA	1 cut(s)	224
GlaI	GCGC	4 cut(s)	5, 224, 1679, 1756
GsaI	CCCAGC	1 cut(s)	1677
HaeII	RGCGCY	1 cut(s)	1681
HaeIII	GGCC	6 cut(s)	231, 245, 524, 1146, 1569, 2188
HapII	CCGG	1 cut(s)	920
HgaI	GACGC	1 cut(s)	1912
HhaI	GCGC	4 cut(s)	6, 225, 1680, 1757
Hin1I	GRCGYC	2 cut(s)	1678, 1923
Hin6I	GCGC	4 cut(s)	4, 223, 1678, 1755
HinP1I	GCGC	4 cut(s)	4, 223, 1678, 1755
HinfI	GANTC	8 cut(s)	632, 821, 1115, 1314, 1969, 1991, 2164, 2285
HpaII	CCGG	1 cut(s)	920
HphI	GGTGA	1 cut(s)	1895
Hpy166II	GTNNAC	1 cut(s)	1999
Hpy188I	TCNGA	6 cut(s)	178, 799, 1062, 1155, 1411, 1695
Hpy188III	TCNNGA	3 cut(s)	538, 1813, 1927
Hpy8I	GTNNAC	1 cut(s)	1999
HpyCH4III	ACNGT	4 cut(s)	17, 27, 1780, 2138
HpyCH4IV	ACGT	4 cut(s)	433, 448, 1180, 2097
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 851, 953, 1139, 1148, 1262, 1761, 1770
HpyF3I	CTNAG	9 cut(s)	363, 395, 1059, 1107, 1152, 1692, 1800, 2126, 2253
HpySE526I	ACGT	4 cut(s)	433, 448, 1180, 2097
Hsp92I	GRCGYC	2 cut(s)	1678, 1923
HspAI	GCGC	4 cut(s)	4, 223, 1678, 1755
KasI	GGCGCC	1 cut(s)	1677
Ksp22I	TGATCA	1 cut(s)	765
KspI	CCGCGG	1 cut(s)	272
Kzo9I	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
LmnI	GCTCC	2 cut(s)	276, 1742
Lsp1109I	GCAGC	8 cut(s)	43, 51, 727, 1142, 1252, 1517, 1717, 1783
MaeI	CTAG	4 cut(s)	618, 711, 1083, 1221
MaeII	ACGT	4 cut(s)	433, 448, 1180, 2097
MaeIII	GTNAC	3 cut(s)	11, 104, 1528
MalI	GATC	6 cut(s)	163, 420, 767, 1442, 1659, 2192
MbiI	CCGCTC	1 cut(s)	1065
MboI	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
MflI	RGATCY	1 cut(s)	418
MhlI	GDGCHC	5 cut(s)	281, 433, 1250, 1747, 2121
MlsI	TGGCCA	2 cut(s)	231, 1146
MluNI	TGGCCA	2 cut(s)	231, 1146
Mly113I	GGCGCC	1 cut(s)	1678
MlyI	GAGTC	3 cut(s)	641, 830, 1985
MmeI	TCCRAC	2 cut(s)	867, 2019
Mox20I	TGGCCA	2 cut(s)	231, 1146
Mph1103I	ATGCAT	1 cut(s)	1376
MroXI	GAANNNNTTC	1 cut(s)	533
MscI	TGGCCA	2 cut(s)	231, 1146
MseI	TTAA	5 cut(s)	258, 1496, 1515, 1700, 2279
MslI	CAYNNNNRTG	4 cut(s)	989, 1449, 2136, 2307
Msp20I	TGGCCA	2 cut(s)	231, 1146
MspA1I	CMGCKG	2 cut(s)	271, 1508
MspCI	CTTAAG	1 cut(s)	2278
MspI	CCGG	1 cut(s)	920
MspR9I	CCNGG	3 cut(s)	526, 1682, 1938
Mva1269I	GAATGC	4 cut(s)	484, 949, 1345, 1764
MvaI	CCWGG	3 cut(s)	526, 1682, 1938
MvnI	CGCG	2 cut(s)	6, 271
MwoI	GCNNNNNNNGC	8 cut(s)	45, 851, 953, 1139, 1148, 1262, 1761, 1770
NarI	GGCGCC	1 cut(s)	1678
NcoI	CCATGG	2 cut(s)	122, 1444
NdeI	CATATG	1 cut(s)	1387
NdeII	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
NlaIV	GGNNCC	2 cut(s)	1679, 1821
NsbI	TGCGCA	1 cut(s)	224
NsiI	ATGCAT	1 cut(s)	1376
NspI	RCATGY	3 cut(s)	1105, 1254, 2125
NspV	TTCGAA	1 cut(s)	1317
OliI	CACNNNNGTG	1 cut(s)	2307
PaeI	GCATGC	1 cut(s)	1105
PciI	ACATGT	1 cut(s)	1250
PctI	GAATGC	4 cut(s)	484, 949, 1345, 1764
PdmI	GAANNNNTTC	1 cut(s)	533
PfeI	GAWTC	5 cut(s)	1115, 1314, 1969, 2164, 2285
PflFI	GACNNNGTC	1 cut(s)	1222
PflMI	CCANNNNNTGG	1 cut(s)	1125
PfoI	TCCNGGA	1 cut(s)	1936
PleI	GAGTC	3 cut(s)	640, 829, 1985
PluTI	GGCGCC	1 cut(s)	1681
PmaCI	CACGTG	1 cut(s)	434
PmlI	CACGTG	1 cut(s)	434
PpsI	GAGTC	3 cut(s)	640, 829, 1985
Ppu21I	YACGTR	1 cut(s)	434
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	1250
Psp124BI	GAGCTC	2 cut(s)	281, 1747
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	3 cut(s)	524, 1680, 1936
PspCI	CACGTG	1 cut(s)	434
PspFI	CCCAGC	1 cut(s)	1673
PspGI	CCWGG	3 cut(s)	524, 1680, 1936
PspN4I	GGNNCC	2 cut(s)	1679, 1821
PspPI	GGNCC	2 cut(s)	244, 343
PspPPI	RGGWCCY	1 cut(s)	343
PstNI	CAGNNNCTG	2 cut(s)	45, 1730
PsuI	RGATCY	1 cut(s)	418
PsyI	GACNNNGTC	1 cut(s)	1222
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	4 cut(s)	214, 311, 1358, 1998
RsaNI	GTAC	4 cut(s)	213, 310, 1357, 1997
RseI	CAYNNNNRTG	4 cut(s)	989, 1449, 2136, 2307
SacI	GAGCTC	2 cut(s)	281, 1747
SacII	CCGCGG	1 cut(s)	272
SaqAI	TTAA	5 cut(s)	258, 1496, 1515, 1700, 2279
Sau3AI	GATC	6 cut(s)	161, 418, 765, 1440, 1657, 2190
Sau96I	GGNCC	2 cut(s)	244, 343
SchI	GAGTC	3 cut(s)	641, 830, 1985
ScrFI	CCNGG	3 cut(s)	526, 1682, 1938
SduI	GDGCHC	5 cut(s)	281, 433, 1250, 1747, 2121
SfoI	GGCGCC	1 cut(s)	1679
Sfr303I	CCGCGG	1 cut(s)	272
SfuI	TTCGAA	1 cut(s)	1317
SgrBI	CCGCGG	1 cut(s)	272
SinI	GGWCC	1 cut(s)	343
SmiMI	CAYNNNNRTG	4 cut(s)	989, 1449, 2136, 2307
SmlI	CTYRAG	2 cut(s)	1243, 2278
SmoI	CTYRAG	2 cut(s)	1243, 2278
SphI	GCATGC	1 cut(s)	1105
SspDI	GGCGCC	1 cut(s)	1677
SspMI	CTAG	4 cut(s)	618, 711, 1083, 1221
SstI	GAGCTC	2 cut(s)	281, 1747
StyD4I	CCNGG	3 cut(s)	524, 1680, 1936
StyI	CCWWGG	3 cut(s)	122, 1348, 1444
TaaI	ACNGT	4 cut(s)	17, 27, 1780, 2138
TaiI	ACGT	4 cut(s)	436, 451, 1183, 2100
TaqI	TCGA	5 cut(s)	537, 635, 723, 1317, 1812
TatI	WGTACW	2 cut(s)	1356, 1996
TauI	GCSGC	4 cut(s)	271, 587, 1068, 1764
TfiI	GAWTC	5 cut(s)	1115, 1314, 1969, 2164, 2285
Tru1I	TTAA	5 cut(s)	258, 1496, 1515, 1700, 2279
Tru9I	TTAA	5 cut(s)	258, 1496, 1515, 1700, 2279
TscAI	CASTG	4 cut(s)	660, 974, 2143, 2314
TseI	GCWGC	8 cut(s)	31, 39, 715, 1130, 1265, 1505, 1730, 1796
TspGWI	ACGGA	2 cut(s)	916, 2183
TspRI	CASTG	4 cut(s)	660, 974, 2143, 2314
Tth111I	GACNNNGTC	1 cut(s)	1222
Van91I	CCANNNNNTGG	1 cut(s)	1125
Vha464I	CTTAAG	1 cut(s)	2278
VpaK11BI	GGWCC	1 cut(s)	343
XapI	RAATTY	4 cut(s)	194, 928, 1696, 1855
XceI	RCATGY	3 cut(s)	1105, 1254, 2125
XcmI	CCANNNNNNNNNTGG	2 cut(s)	224, 1154
XmnI	GAANNNNTTC	1 cut(s)	533
XspI	CTAG	4 cut(s)	618, 711, 1083, 1221
Zsp2I	ATGCAT	1 cut(s)	1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.