Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0013837

Physical Location & Seq

Genomic Coordinates Forward (+)

35983941 .. 35986769

Gene Structure 2829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1230200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGCGCGGGAGTTACCGTTTCAGACAGTTGCACAGCGGCAGCAGCAACTTCTGCTCCCGGTCATTCAAATCCCAGCAACCCATCAACATCAAGGACCGAACAGGAAATCCCACTTCTCAAAATCCAATCCCATCGAAGAAAACACTAACCCAGAAACGCAGATCCATGAACAAGTTATCCAACTCCTCCGACTCAGAAATTGTGAAATCGAACATGGACATCACCACCCAGATGCGCAACGGCCGGTGCGAAGCCGCTCTGCTTGTCTTCAACGCCATGCCCCGGCGGAGCCCCGTGTCTTATAACGCTATGGTATCTGGGTACCTAGCAAATGGCAAGTTTGATCTTGCAAAGGACATGTTTGAGAAAATGCCTGAGAGAGACCTGGTTTCATGGAATGTGATGCTTAGTGGGTATGTGAGGAACAGGGATCTTGGTGCCGCTCGTGCCTTGTTTGAACGAATGCCCGAGAAGGATGTTGTTTCGTGGAATGCTATGTTGTCCGGTTATGCCCAGAACGGGTACGTTGATGAGGCGAGGACGATTTTTCAAAGGATGCCGGATAAGAATGAGATTTCGTGGAATGGGTTGCTTGCAGCGTATGTGCAGAATGGAAGGGTAGAAGATGCTTGTAGGTTGTTTGAGTCGAAAGCAGATTGGGAAGCAGTTTCTTGGAATTGTTTGATGGGTGGATTTGTAAAACAAAAGAGATTGGTTAATGCTAGGCAGCTTTTTGACCGGATGCCTGTGAGGGATGAAGTTTCCTGGAATACCATGATCACGGGATATGCGCAGAATGGGCAAATGTCAGAAGCTAGGAGGTTATTTGAAGAGTGCCCAATTCGGGATGTGTTTGCATGGACATCAATGCTTTCGGGTTATGTGCAGAATGGAATGTTGGATGAAGCAAGAAGTATCTTTGATGAAATGCCAGAAAAGAATTCGGTTTCGTGGAATGCAATGATTGCAGGTTATGTACAAAGCAAGAGAATGGACATGGCAACGAAATTGTTTGAGGCAATGCCTTCTCGGAATGCCAGTTCATGGAATACCATTTTAACTGGCTATGCTCAGAGTGGTGATATTGTTTGTGCCAAGGAAATCTTTGATAGCATGCCTCGGCGCGATTCCATCTCTTGGGCGGCTATTATTGCCGGTTATGCTCAAAATGGTTATAGTGAAGAGGCTTTGCAACTCTTTGTAGAGATGAAAAGAGATGGGGAAAGGTTGACTAGGTCTTCCTTTACCTGTGCTTTGAGCACCTGTGCTGAAATTGCAGCTTTGGAGTTGGGGAAGCAGTTGCACGGACGTATGACAAAAGCAGGATACGAAACTGGGTGCTATGTGGGGAATGCACTACTTGTAATGTACTGTAAATGTGGAAGCATTGAGGAAGCATATGACGTTTTCCAAGGAATAGCTGAAAAGGATGTTGTCTCATGGAACACGATGATCTATGGCTATGCAAGGCATGGATTTGGCCTAAAGGCTCTTAAAGTTTTTGACTCAATGAAGGCGGTGGGTATCAAACCAGATGATGTGACAATGGTCGGCGTGTTGTCTGCTTGTAGTCATACTGGTCTGGTAGACAGGGGCACCGAATATTTTTATTCAATGAATCAGGATTATGGCATAACAGAAAATTCAAAACACTATACCTGTATGATTGACCTTTTAGGTAGAGCAGGGCGCCTCGAGGAAGCACAGAATTTGATGAGAGATATGTCTTTTGAACCGGATGCTGCAATGTGGGGAGCTCTGCTTGGTGCAAGCCGGATTCATGGCAATACCAAATTAGGTGAAAAGGCTGCTCGGATAATTTTCGAGATGGAGCCTGAAAATGCAGGAATGTATGTTCTTCTCTCGAATTTATACGCAGCTTCAGGCAGATGGGGCGATGTCGATAAGATGAGATTGAAGATGAGGGATAAAGGTGTCAGGAAAGTACCTGGATATAGCTGGGTTGAAGTCCAAAACAAGACTCATACATTTTCAGTTGGGGACACTATACACCCTGACAAGGACAAGATATATGCCTTCTTAGAAGAGTTAGATTTGAAAATGAAGCTGGAGGGGTATGTTTCGTCTACAAAGCTGGTTTTGCACGATGTGGAAGAGGAAGAGAAAGAGCATATGCTGAAGTATCACAGCGAGAAATTAGCGGTGGCATTTGGGATTCTTTCGATTCCAGCTGGGAGGCCAGTCCGCGTGATAAAGAACTTGCGAGTTTGTGAAGACTGCCATAATGCCATCAAGTACATATCCAGGATTGTGGCAAGGACAATAATCCTAAGGGATTCTCACCGCTTCCACCACTTCACCGGGGGTAATTGTTCTTGCGGGGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

785

Amino Acids

88.66

Weight (kDa)

8.47

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	99 - 128	4.8e-07	PPR repeat
PPR	PF01535	130 - 159	2.2e-06	PPR repeat
PPR_2	PF13041	158 - 190	2.6e-06	PPR repeat family
PPR	PF01535	161 - 190	3.7e-08	PPR repeat
PPR_2	PF13041	252 - 278	2.1e-06	PPR repeat family
PPR	PF01535	254 - 278	1.6e-07	PPR repeat
PPR_2	PF13041	282 - 314	1.2e-06	PPR repeat family
PPR	PF01535	286 - 314	4.6e-09	PPR repeat
PPR_2	PF13041	313 - 345	2.8e-07	PPR repeat family
PPR	PF01535	316 - 344	1.8e-06	PPR repeat
PPR_2	PF13041	376 - 423	3.3e-07	PPR repeat family
PPR	PF01535	378 - 407	7e-07	PPR repeat
PPR_2	PF13041	476 - 524	1.6e-11	PPR repeat family
PPR	PF01535	479 - 509	5.9e-08	PPR repeat
E_motif	PF20431	594 - 656	5.6e-21	E motif
DYW_deaminase	PF14432	692 - 784	1.5e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0013837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02750
fragaria_vesca	FvH4_5g17170 FvH4_5g17170 FvH4_5g17170
malus_domestica	MD06G1230200.v1.1
prunus_persica	Prupe.5G231300_v2.0.a1
pyrus_communis	pycom06g20140
rosa_chinensis	RchiOBHm_Chr7g0178631
rosa_laevigata	RLG00000005428
rosa_multiflora	Rmu_sc0002320.1_g000006
rosa_rugosa	Rorug06G0418500 Rorug06G0418600 Rorug07G0253600
rosa_samantha	Rh7AG017300 Rh7BG016900 Rh7DG017500
rosa_wichuraiana	Rw7G001400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	303
AbsI	CCTCGAGG	1 cut(s)	1694
Acc16I	TGCGCA	2 cut(s)	236, 792
Acc36I	ACCTGC	1 cut(s)	959
Acc65I	GGTACC	1 cut(s)	321
AccB1I	GGYRCC	4 cut(s)	321, 437, 1595, 1689
AccB7I	CCANNNNNTGG	2 cut(s)	1044, 1137
AccBSI	CCGCTC	2 cut(s)	257, 443
AccI	GTMKAC	2 cut(s)	1587, 2087
AccII	CGCG	3 cut(s)	6, 1125, 2208
AclWI	GGATC	2 cut(s)	156, 438
AcoI	YGGCCR	1 cut(s)	241
AcsI	RAATTY	4 cut(s)	940, 1642, 1708, 1867
AcuI	CTGAAG	2 cut(s)	1866, 2159
AcyI	GRCGYC	1 cut(s)	1690
AdeI	CACNNNGTG	1 cut(s)	2110
AfaI	GTAC	6 cut(s)	323, 524, 978, 1370, 1947, 2258
AfiI	CCNNNNNNNGG	6 cut(s)	282, 519, 844, 1044, 1137, 2020
AflIII	ACRYGT	1 cut(s)	357
AjnI	CCWGG	4 cut(s)	384, 764, 1948, 2264
AjuI	GAANNNNNNNTTGG	2 cut(s)	881, 913
AloI	GAACNNNNNNTCC	8 cut(s)	91, 123, 161, 193, 1024, 1056, 1839, 1871
Alw21I	GWGCWC	2 cut(s)	1262, 1759
Alw26I	GTCTC	2 cut(s)	375, 1441
AlwI	GGATC	2 cut(s)	156, 438
Ama87I	CYCGRG	2 cut(s)	467, 1694
AoxI	GGCC	3 cut(s)	241, 1480, 2198
ApeKI	GCWGC	8 cut(s)	39, 42, 596, 727, 1277, 1742, 1808, 1877
ApoI	RAATTY	4 cut(s)	940, 1642, 1708, 1867
Asp718I	GGTACC	1 cut(s)	321
AspLEI	GCGC	5 cut(s)	6, 237, 793, 1125, 1692
AspS9I	GGNCC	1 cut(s)	94
AsuC2I	CCSGG	3 cut(s)	58, 283, 2323
AsuHPI	GGTGA	5 cut(s)	214, 1091, 1811, 2294, 2311
AvaI	CYCGRG	2 cut(s)	467, 1694
AvaII	GGWCC	1 cut(s)	94
AxyI	CCTNAGG	1 cut(s)	2291
BaeGI	GKGCMC	2 cut(s)	839, 1598
BanI	GGYRCC	4 cut(s)	321, 437, 1595, 1689
BanII	GRGCYC	2 cut(s)	293, 1759
BauI	CACGAG	1 cut(s)	444
BbsI	GAAGAC	3 cut(s)	259, 1230, 2241
Bbv12I	GWGCWC	2 cut(s)	1262, 1759
BbvI	GCAGC	8 cut(s)	51, 54, 608, 739, 1289, 1729, 1795, 1889
BccI	CCATC	8 cut(s)	89, 139, 679, 1139, 1211, 1822, 1884, 2258
BceAI	ACGGC	1 cut(s)	256
BciT130I	CCWGG	4 cut(s)	386, 766, 1950, 2266
BciVI	GTATCC	1 cut(s)	1319
BclI	TGATCA	1 cut(s)	777
BcnI	CCSGG	3 cut(s)	58, 283, 2323
BcoDI	GTCTC	2 cut(s)	375, 1441
BfaI	CTAG	4 cut(s)	326, 723, 816, 1233
BfoI	RGCGCY	1 cut(s)	1693
BfuAI	ACCTGC	1 cut(s)	959
BfuI	GTATCC	1 cut(s)	1319
Bme1390I	CCNGG	7 cut(s)	58, 283, 386, 766, 1950, 2266, 2323
Bme18I	GGWCC	1 cut(s)	94
BmeT110I	CYCGRG	2 cut(s)	467, 1694
BmgT120I	GGNCC	1 cut(s)	94
BmiI	GGNNCC	6 cut(s)	290, 323, 439, 1597, 1691, 1833
BmrFI	CCNGG	7 cut(s)	58, 283, 386, 766, 1950, 2266, 2323
BmrI	ACTGGG	1 cut(s)	1344
BmsI	GCATC	6 cut(s)	222, 393, 546, 616, 732, 1729
BmuI	ACTGGG	1 cut(s)	1344
BoxI	GACNNNNGTC	1 cut(s)	1547
BpiI	GAAGAC	3 cut(s)	259, 1230, 2241
BpmI	CTGGAG	1 cut(s)	2090
BpuMI	CCSGG	3 cut(s)	58, 283, 2323
BsaHI	GRCGYC	1 cut(s)	1690
BsaI	GGTCTC	1 cut(s)	375
BsaJI	CCNNGG	5 cut(s)	281, 1095, 1118, 1411, 2322
BsaWI	WCCGGW	3 cut(s)	503, 738, 1735
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 38, 68
Bsc4I	CCNNNNNNNGG	6 cut(s)	282, 519, 844, 1044, 1137, 2020
Bse118I	RCCGGY	2 cut(s)	243, 1154
Bse1I	ACTGG	6 cut(s)	1038, 1066, 1339, 1582, 2201, 2354
Bse21I	CCTNAGG	1 cut(s)	2291
Bse3DI	GCAATG	3 cut(s)	966, 1026, 1752
BseBI	CCWGG	4 cut(s)	386, 766, 1950, 2266
BseDI	CCNNGG	5 cut(s)	281, 1095, 1118, 1411, 2322
BseGI	GGATG	8 cut(s)	481, 561, 747, 760, 853, 907, 1435, 1744
BseLI	CCNNNNNNNGG	6 cut(s)	282, 519, 844, 1044, 1137, 2020
BseMI	GCAATG	3 cut(s)	966, 1026, 1752
BseMII	CTCAG	3 cut(s)	207, 366, 1085
BseNI	ACTGG	6 cut(s)	1038, 1066, 1339, 1582, 2201, 2354
BseRI	GAGGAG	1 cut(s)	175
BseSI	GKGCMC	2 cut(s)	839, 1598
BseX3I	CGGCCG	1 cut(s)	241
BseXI	GCAGC	8 cut(s)	51, 54, 608, 739, 1289, 1729, 1795, 1889
BseYI	CCCAGC	3 cut(s)	72, 1959, 2192
BsgI	GTGCAG	2 cut(s)	626, 905
Bsh1236I	CGCG	3 cut(s)	6, 1125, 2208
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	3 cut(s)	243, 1482, 2200
BshNI	GGYRCC	4 cut(s)	321, 437, 1595, 1689
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	2 cut(s)	1262, 1759
BsiHKCI	CYCGRG	2 cut(s)	467, 1694
BslFI	GGGAC	1 cut(s)	2015
BslI	CCNNNNNNNGG	6 cut(s)	282, 519, 844, 1044, 1137, 2020
BsmAI	GTCTC	2 cut(s)	375, 1441
BsmFI	GGGAC	1 cut(s)	2015
BsmI	GAATGC	5 cut(s)	468, 496, 961, 1039, 1357
BsnI	GGCC	3 cut(s)	243, 1482, 2200
Bso31I	GGTCTC	1 cut(s)	375
BsoBI	CYCGRG	2 cut(s)	467, 1694
Bsp1286I	GDGCHC	5 cut(s)	293, 839, 1262, 1598, 1759
Bsp1407I	TGTACA	1 cut(s)	976
Bsp143I	GATC	5 cut(s)	161, 343, 430, 777, 1452
BspANI	GGCC	3 cut(s)	243, 1482, 2200
BspCNI	CTCAG	3 cut(s)	206, 367, 1084
BspFNI	CGCG	3 cut(s)	6, 1125, 2208
BspLI	GGNNCC	6 cut(s)	290, 323, 439, 1597, 1691, 1833
BspMI	ACCTGC	1 cut(s)	959
BspPI	GGATC	2 cut(s)	156, 438
BspT107I	GGYRCC	4 cut(s)	321, 437, 1595, 1689
BspTNI	GGTCTC	1 cut(s)	375
BsrBI	CCGCTC	2 cut(s)	257, 443
BsrDI	GCAATG	3 cut(s)	966, 1026, 1752
BsrFI	RCCGGY	2 cut(s)	243, 1154
BsrGI	TGTACA	1 cut(s)	976
BsrI	ACTGG	6 cut(s)	1038, 1066, 1339, 1582, 2201, 2354
BssAI	RCCGGY	2 cut(s)	243, 1154
BssECI	CCNNGG	5 cut(s)	281, 1095, 1118, 1411, 2322
BssMI	GATC	5 cut(s)	161, 343, 430, 777, 1452
BssNI	GRCGYC	1 cut(s)	1690
BssSI	CACGAG	1 cut(s)	444
BssT1I	CCWWGG	2 cut(s)	1095, 1411
Bst2BI	CACGAG	1 cut(s)	444
Bst2UI	CCWGG	4 cut(s)	386, 766, 1950, 2266
Bst4CI	ACNGT	3 cut(s)	17, 27, 1373
Bst6I	CTCTTC	5 cut(s)	825, 1176, 2040, 2109, 2115
BstACI	GRCGYC	1 cut(s)	1690
BstAPI	GCANNNNNTGC	2 cut(s)	51, 965
BstAUI	TGTACA	1 cut(s)	976
BstC8I	GCNNGC	3 cut(s)	594, 1115, 1771
BstDEI	CTNAG	6 cut(s)	193, 375, 407, 1071, 2041, 2291
BstF5I	GGATG	8 cut(s)	481, 561, 747, 760, 853, 907, 1435, 1744
BstFNI	CGCG	3 cut(s)	6, 1125, 2208
BstH2I	RGCGCY	1 cut(s)	1693
BstHHI	GCGC	5 cut(s)	6, 237, 793, 1125, 1692
BstKTI	GATC	5 cut(s)	164, 346, 433, 780, 1455
BstMAI	GTCTC	2 cut(s)	375, 1441
BstMBI	GATC	5 cut(s)	161, 343, 430, 777, 1452
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	4 cut(s)	386, 766, 1950, 2266
BstNSI	RCATGY	2 cut(s)	361, 1117
BstPAI	GACNNNNGTC	1 cut(s)	1547
BstSCI	CCNGG	7 cut(s)	56, 281, 384, 764, 1948, 2264, 2321
BstSLI	GKGCMC	2 cut(s)	839, 1598
BstUI	CGCG	3 cut(s)	6, 1125, 2208
BstV1I	GCAGC	8 cut(s)	51, 54, 608, 739, 1289, 1729, 1795, 1889
BstV2I	GAAGAC	3 cut(s)	259, 1230, 2241
BstX2I	RGATCY	2 cut(s)	161, 430
BstXI	CCANNNNNNTGG	1 cut(s)	2272
BstYI	RGATCY	2 cut(s)	161, 430
BstZI	CGGCCG	1 cut(s)	241
Bsu36I	CCTNAGG	1 cut(s)	2291
BsuI	GTATCC	1 cut(s)	1319
BsuRI	GGCC	3 cut(s)	243, 1482, 2200
BtgZI	GCGATG	1 cut(s)	1911
BtsCI	GGATG	8 cut(s)	481, 561, 747, 760, 853, 907, 1435, 1744
BveI	ACCTGC	1 cut(s)	959
Cac8I	GCNNGC	3 cut(s)	594, 1115, 1771
CfoI	GCGC	5 cut(s)	6, 237, 793, 1125, 1692
Cfr10I	RCCGGY	2 cut(s)	243, 1154
Cfr13I	GGNCC	1 cut(s)	94
CsiI	ACCWGGT	1 cut(s)	384
Csp6I	GTAC	6 cut(s)	322, 523, 977, 1369, 1946, 2257
CviQI	GTAC	6 cut(s)	322, 523, 977, 1369, 1946, 2257
DdeI	CTNAG	6 cut(s)	193, 375, 407, 1071, 2041, 2291
DinI	GGCGCC	1 cut(s)	1691
DpnI	GATC	5 cut(s)	163, 345, 432, 779, 1454
DpnII	GATC	5 cut(s)	161, 343, 430, 777, 1452
DraIII	CACNNNGTG	1 cut(s)	2110
EaeI	YGGCCR	1 cut(s)	241
EagI	CGGCCG	1 cut(s)	241
Eam1104I	CTCTTC	5 cut(s)	825, 1176, 2040, 2109, 2115
EarI	CTCTTC	5 cut(s)	825, 1176, 2040, 2109, 2115
EciI	GGCGGA	1 cut(s)	301
Ecl136II	GAGCTC	1 cut(s)	1757
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	1095, 1411
Eco24I	GRGCYC	2 cut(s)	293, 1759
Eco31I	GGTCTC	1 cut(s)	375
Eco47I	GGWCC	1 cut(s)	94
Eco52I	CGGCCG	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	1757
Eco57I	CTGAAG	2 cut(s)	1866, 2159
Eco81I	CCTNAGG	1 cut(s)	2291
Eco88I	CYCGRG	2 cut(s)	467, 1694
EcoICRI	GAGCTC	1 cut(s)	1757
EcoRI	GAATTC	1 cut(s)	940
EcoRII	CCWGG	4 cut(s)	384, 764, 1948, 2264
EcoT14I	CCWWGG	2 cut(s)	1095, 1411
EcoT38I	GRGCYC	2 cut(s)	293, 1759
EgeI	GGCGCC	1 cut(s)	1691
EheI	GGCGCC	1 cut(s)	1691
ErhI	CCWWGG	2 cut(s)	1095, 1411
FalI	AAGNNNNNCTT	2 cut(s)	1088, 1120
FaqI	GGGAC	1 cut(s)	2015
FauI	CCCGC	1 cut(s)	2333
FauNDI	CATATG	2 cut(s)	1399, 2133
FbaI	TGATCA	1 cut(s)	777
FblI	GTMKAC	2 cut(s)	1587, 2087
FokI	GGATG	8 cut(s)	488, 568, 754, 767, 860, 914, 1442, 1751
FriOI	GRGCYC	2 cut(s)	293, 1759
FspBI	CTAG	4 cut(s)	326, 723, 816, 1233
FspI	TGCGCA	2 cut(s)	236, 792
GlaI	GCGC	5 cut(s)	5, 236, 792, 1124, 1691
GsaI	CCCAGC	3 cut(s)	76, 1963, 2196
GsuI	CTGGAG	1 cut(s)	2090
HaeII	RGCGCY	1 cut(s)	1693
HaeIII	GGCC	3 cut(s)	243, 1482, 2200
HhaI	GCGC	5 cut(s)	6, 237, 793, 1125, 1692
Hin1I	GRCGYC	1 cut(s)	1690
Hin6I	GCGC	5 cut(s)	4, 235, 791, 1123, 1690
HinP1I	GCGC	5 cut(s)	4, 235, 791, 1123, 1690
HincII	GTYRAC	1 cut(s)	1230
HindII	GTYRAC	1 cut(s)	1230
HphI	GGTGA	5 cut(s)	214, 1091, 1811, 2294, 2311
Hpy166II	GTNNAC	3 cut(s)	1230, 1588, 2088
Hpy188I	TCNGA	7 cut(s)	23, 190, 196, 811, 1032, 1074, 1815
Hpy188III	TCNNGA	5 cut(s)	845, 1622, 1825, 1864, 1939
Hpy8I	GTNNAC	3 cut(s)	1230, 1588, 2088
HpyAV	CCTTC	5 cut(s)	466, 609, 1035, 1507, 2047
HpyCH4III	ACNGT	3 cut(s)	17, 27, 1373
HpyCH4IV	ACGT	3 cut(s)	525, 1309, 1404
HpyF3I	CTNAG	6 cut(s)	193, 375, 407, 1071, 2041, 2291
HpySE526I	ACGT	3 cut(s)	525, 1309, 1404
Hsp92I	GRCGYC	1 cut(s)	1690
HspAI	GCGC	5 cut(s)	4, 235, 791, 1123, 1690
KasI	GGCGCC	1 cut(s)	1689
KpnI	GGTACC	1 cut(s)	325
Ksp22I	TGATCA	1 cut(s)	777
Kzo9I	GATC	5 cut(s)	161, 343, 430, 777, 1452
LmnI	GCTCC	4 cut(s)	59, 288, 1754, 1831
Lsp1109I	GCAGC	8 cut(s)	51, 54, 608, 739, 1289, 1729, 1795, 1889
LweI	GCATC	6 cut(s)	222, 393, 546, 616, 732, 1729
MabI	ACCWGGT	1 cut(s)	384
MaeI	CTAG	4 cut(s)	326, 723, 816, 1233
MaeII	ACGT	3 cut(s)	525, 1309, 1404
MaeIII	GTNAC	2 cut(s)	11, 1540
MalI	GATC	5 cut(s)	163, 345, 432, 779, 1454
MbiI	CCGCTC	2 cut(s)	257, 443
MboI	GATC	5 cut(s)	161, 343, 430, 777, 1452
MflI	RGATCY	2 cut(s)	161, 430
MhlI	GDGCHC	5 cut(s)	293, 839, 1262, 1598, 1759
Mly113I	GGCGCC	1 cut(s)	1690
MlyI	GAGTC	4 cut(s)	185, 653, 1499, 1975
MmeI	TCCRAC	3 cut(s)	204, 213, 879
MseI	TTAA	3 cut(s)	717, 1058, 1494
MslI	CAYNNNNRTG	1 cut(s)	230
MspA1I	CMGCKG	2 cut(s)	36, 2192
MspR9I	CCNGG	7 cut(s)	58, 283, 386, 766, 1950, 2266, 2323
Mva1269I	GAATGC	5 cut(s)	468, 496, 961, 1039, 1357
MvaI	CCWGG	4 cut(s)	386, 766, 1950, 2266
MvnI	CGCG	3 cut(s)	6, 1125, 2208
NarI	GGCGCC	1 cut(s)	1690
NciI	CCSGG	3 cut(s)	58, 283, 2323
NdeI	CATATG	2 cut(s)	1399, 2133
NdeII	GATC	5 cut(s)	161, 343, 430, 777, 1452
NlaIV	GGNNCC	6 cut(s)	290, 323, 439, 1597, 1691, 1833
NmeAIII	GCCGAG	1 cut(s)	1099
NmuCI	GTSAC	1 cut(s)	1540
NsbI	TGCGCA	2 cut(s)	236, 792
NspI	RCATGY	2 cut(s)	361, 1117
PaeI	GCATGC	1 cut(s)	1117
PaeR7I	CTCGAG	1 cut(s)	1694
PciI	ACATGT	1 cut(s)	357
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PctI	GAATGC	5 cut(s)	468, 496, 961, 1039, 1357
PfeI	GAWTC	6 cut(s)	1127, 1618, 1777, 2176, 2185, 2297
PflFI	GACNNNGTC	1 cut(s)	1234
PflMI	CCANNNNNTGG	2 cut(s)	1044, 1137
PfoI	TCCNGGA	2 cut(s)	764, 2264
PleI	GAGTC	4 cut(s)	185, 652, 1499, 1975
PluTI	GGCGCC	1 cut(s)	1693
PpsI	GAGTC	4 cut(s)	185, 652, 1499, 1975
PscI	ACATGT	1 cut(s)	357
PshAI	GACNNNNGTC	1 cut(s)	1547
PsiI	TTATAA	1 cut(s)	303
Psp124BI	GAGCTC	1 cut(s)	1759
Psp6I	CCWGG	4 cut(s)	384, 764, 1948, 2264
PspFI	CCCAGC	3 cut(s)	72, 1959, 2192
PspGI	CCWGG	4 cut(s)	384, 764, 1948, 2264
PspN4I	GGNNCC	6 cut(s)	290, 323, 439, 1597, 1691, 1833
PspPI	GGNCC	1 cut(s)	94
PspXI	VCTCGAGB	1 cut(s)	1694
PsuI	RGATCY	2 cut(s)	161, 430
PsyI	GACNNNGTC	1 cut(s)	1234
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	6 cut(s)	323, 524, 978, 1370, 1947, 2258
RsaNI	GTAC	6 cut(s)	322, 523, 977, 1369, 1946, 2257
RseI	CAYNNNNRTG	1 cut(s)	230
SacI	GAGCTC	1 cut(s)	1759
SaqAI	TTAA	3 cut(s)	717, 1058, 1494
Sau3AI	GATC	5 cut(s)	161, 343, 430, 777, 1452
Sau96I	GGNCC	1 cut(s)	94
SchI	GAGTC	4 cut(s)	185, 653, 1499, 1975
ScrFI	CCNGG	7 cut(s)	58, 283, 386, 766, 1950, 2266, 2323
SduI	GDGCHC	5 cut(s)	293, 839, 1262, 1598, 1759
SexAI	ACCWGGT	1 cut(s)	384
SfaNI	GCATC	6 cut(s)	222, 393, 546, 616, 732, 1729
SfoI	GGCGCC	1 cut(s)	1691
Sfr274I	CTCGAG	1 cut(s)	1694
SinI	GGWCC	1 cut(s)	94
SlaI	CTCGAG	1 cut(s)	1694
SmiMI	CAYNNNNRTG	1 cut(s)	230
SmlI	CTYRAG	1 cut(s)	1694
SmoI	CTYRAG	1 cut(s)	1694
SphI	GCATGC	1 cut(s)	1117
SspDI	GGCGCC	1 cut(s)	1689
SspI	AATATT	1 cut(s)	1604
SspMI	CTAG	4 cut(s)	326, 723, 816, 1233
SstI	GAGCTC	1 cut(s)	1759
StyD4I	CCNGG	7 cut(s)	56, 281, 384, 764, 1948, 2264, 2321
StyI	CCWWGG	2 cut(s)	1095, 1411
TaaI	ACNGT	3 cut(s)	17, 27, 1373
TaiI	ACGT	3 cut(s)	528, 1312, 1407
TaqI	TCGA	8 cut(s)	134, 209, 647, 1695, 1824, 1865, 1902, 2183
TaqII	GACCGA	1 cut(s)	111
TatI	WGTACW	3 cut(s)	976, 1368, 2256
TauI	GCSGC	4 cut(s)	39, 257, 443, 1145
TfiI	GAWTC	6 cut(s)	1127, 1618, 1777, 2176, 2185, 2297
Tru1I	TTAA	3 cut(s)	717, 1058, 1494
Tru9I	TTAA	3 cut(s)	717, 1058, 1494
TseFI	GTSAC	1 cut(s)	1540
TseI	GCWGC	8 cut(s)	39, 42, 596, 727, 1277, 1742, 1808, 1877
Tsp45I	GTSAC	1 cut(s)	1540
TspGWI	ACGGA	1 cut(s)	1320
Tth111I	GACNNNGTC	1 cut(s)	1234
Van91I	CCANNNNNTGG	2 cut(s)	1044, 1137
VpaK11BI	GGWCC	1 cut(s)	94
XapI	RAATTY	4 cut(s)	940, 1642, 1708, 1867
XceI	RCATGY	2 cut(s)	361, 1117
XhoI	CTCGAG	1 cut(s)	1694
XmiI	GTMKAC	2 cut(s)	1587, 2087
XspI	CTAG	4 cut(s)	326, 723, 816, 1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.