Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Reverse (-)

9969227 .. 9972909

Gene Structure 3683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17420.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGAATCGGAGATTGGTTTTGGCGGTGGCGGTTTTCTCTCTCTTCGCCGTTTCGATTTCAGCGCGGCCGTTTGTTCTGGTTCTTTCTCCAGACGACGTCTTGAACAGCCCCGCCGCGCCCGACGGCGACGGAGCGGCAACCGATCCGACGACTCAGAATGACTCGGCCGACTGGGACGAGTTCGGCGACTCGGCGTATCCGCAATCCGAGGACGAGCTCGACCCGGGCTCGTGGCGGCCGATCTTCGAACCCGACCCGCTCAAGCCGGAGCCGTACGACCAGTCGGACGAGCAGTACTACTCCACAGTGTCGAAATTGATCAAGTCCGTCAGCTCCGGCGACACGGCGCTGATGGAGGAGGCGGTCTCCGAGATCGAGGAGTCCGCTTCCCGCGGGGTTCCTCACGCGCGGTCCGTGCTGGGGTTTCTGATTGGTAGTGGACAGATGAGGAAGCAGAACAAGGCCAAGGCGTTCACGTATCACTACTTCGCCGCAGACGGCGGCAATATGCAGTCGAAGATGGCTCTGGCTTATACTTACTTTAGGCAAGATATGTTTGAAAAAGCGGTTAAGCTTTACGCGGAGTTAGCCGAGGCAGCTGTGAATAGCTTCTTGATCTCCAAGGACTCTCCGGTGATTGAGCCGGTGAGGATCCACAATGGAGCAGAAGAGAATAAGGAGGCATTGAGGAAGAGCCGAGGTGAAGAAGATGAGGACTTTCAGATTCTGGAGTATCAGGCTCAGAAGGGGAATTCTCTTGCAATGTATAAGATTGGACTGTTTTACTATTTCGGGCTGAGAGGGTTGCGCCGGGACCATGCCAAGGCATTGTCGTGGTTTCTCAAGTCTGTGGATAAGGGAGAGCCTAGGGCGATGGAGTTTCTTGGTGAGATTTATGCTAGAGGAGCTGGGGTGGAGAGGAATTACACCAAGGCTCTCGAGTGGCTTTCATTAGCATCTAAACAAGAGCTTTATTCGTCTTATAATGGGATGGGATATTTGTATGTTAAAGGTTATGGAGTGGAGAAGAAGAACTACACTAAGGCAAAAGAGTACTTTGAGAAGGCTGCTGAGAATCGAGACGCTGGCGGGCACTATAACTTAGGAGTACTTTATCTCAAAGGGATTGGGGTAAAAAGAGATGTGAAACTTGCATGTCAATACTTCATTGCGGCTGCTAATGCAGGTCAACCAAAGGCATTCTACCAGCTTGCAAAGATGTTTCATACTGGAGTGGGGCTTAAGAAAAATCTTCCCAGGGCCACTGTGTTATACAAGCTAGTTGCTGAAAGGGGGCCATGGAGTTCCTTGTCCAGATGGGCACTGGAGTCGTACTTAAAGGGGGATGTGGGGAAGGCATTTTTCTTGTACTCAAGGATGGCTGAGTTAGGCTATGAGGTAGCACAAAGTAATGCTGCATGGATTCTTGACAAGTACGGAGAAGATAGCATGTGCATGGGAGAATCTGGCTTTTGTACAGATGCAGAAAGACATCAGCGGGCACATTCTTTGTGGTGGCAAGCATCTGAGCAGGGTAATGAACATGCTGCTTTGCTGATTGGGGATGCATATTACTATGGTCAGGGTACTGAAAGGGATTATGAACGTGCAGCAGAGGCTTACAAGCATGCTAGGTCCCAATCTAATGCACAAGCCATGTTCAACCTGGGCTACATGCATGAGCATGGACAAGGATTACCTTTGGATCTCCATCTAGCCAAACGTTACTATGATCAAGCCTTAGAGATTGATCCGGCAGCAAAGTTACCAGTCACACTAGCCCTTGCAAGCTTATGGATACGAAAGAATTATGCCAATGGATTTCTGGTCCATTTGATTGACTCGTTGCCTGAAGTCTATCCAAAATTGGAAGAGTGGATAGATAATGTGTTGCTGGAGGAAGGAAATGCAACAATATTGACTCTTTTTGTTTGTCTCCTCACTGTCCTATATCTCCGTGAGCGACAACGCAGGCATGCTGTAGTAGTCCCTGCTGGAGTGGCTATGCCGCCCAATCCAAATGAACTTGTTGCGCCTGTACCCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

683

Amino Acids

76.4

Weight (kDa)

5.72

Isoelectric Point (pI)

47.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	253 - 287	2.1e-06	Sel1 repeat
Sel1	PF08238	289 - 322	2.5e-07	Sel1 repeat
Sel1	PF08238	327 - 359	1.1e-06	Sel1 repeat
Sel1	PF08238	365 - 396	1.7e-06	Sel1 repeat
Sel1	PF08238	550 - 581	5.4e-07	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	984
AatII	GACGTC	1 cut(s)	99
Acc36I	ACCTGC	1 cut(s)	1175
AccBSI	CCGCTC	2 cut(s)	134, 259
AccII	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
AclI	AACGTT	1 cut(s)	1723
AclWI	GGATC	5 cut(s)	137, 646, 659, 1713, 1745
AcoI	YGGCCR	3 cut(s)	65, 165, 236
AcsI	RAATTY	1 cut(s)	751
AcuI	CTGAAG	1 cut(s)	1872
AcyI	GRCGYC	1 cut(s)	96
AfiI	CCNNNNNNNGG	2 cut(s)	420, 823
AflII	CTTAAG	1 cut(s)	1241
AgsI	TTSAA	3 cut(s)	103, 560, 1663
AjnI	CCWGG	2 cut(s)	1256, 1665
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	3 cut(s)	370, 1074, 1940
AlwI	GGATC	5 cut(s)	137, 646, 659, 1713, 1745
AlwNI	CAGNNNCTG	1 cut(s)	727
Ama87I	CYCGRG	2 cut(s)	223, 938
AoxI	GGCC	6 cut(s)	65, 165, 236, 462, 1260, 1295
ApeKI	GCWGC	7 cut(s)	596, 1067, 1175, 1415, 1547, 1610, 1757
ApoI	RAATTY	1 cut(s)	751
Asp700I	GAANNNNTTC	1 cut(s)	608
AspA2I	CCTAGG	1 cut(s)	866
AspLEI	GCGC	6 cut(s)	64, 118, 349, 409, 810, 2035
AspS9I	GGNCC	6 cut(s)	411, 814, 1260, 1295, 1635, 1828
AsuC2I	CCSGG	3 cut(s)	224, 225, 812
AsuHPI	GGTGA	4 cut(s)	646, 658, 713, 899
AsuII	TTCGAA	1 cut(s)	246
AvaI	CYCGRG	2 cut(s)	223, 938
AvaII	GGWCC	4 cut(s)	411, 814, 1635, 1828
AvrII	CCTAGG	1 cut(s)	866
BaeGI	GKGCMC	3 cut(s)	1095, 1324, 1504
BamHI	GGATCC	1 cut(s)	651
BanII	GRGCYC	2 cut(s)	219, 230
BarI	GAAGNNNNNNTAC	4 cut(s)	470, 502, 1019, 1051
BauI	CACGAG	1 cut(s)	229
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	7 cut(s)	608, 1054, 1162, 1402, 1534, 1622, 1769
BccI	CCATC	7 cut(s)	346, 514, 868, 985, 1311, 1372, 1719
BceAI	ACGGC	6 cut(s)	32, 52, 139, 256, 360, 514
BcgI	CGANNNNNNTGC	2 cut(s)	1311, 1345
BciT130I	CCWGG	2 cut(s)	1258, 1667
BciVI	GTATCC	2 cut(s)	207, 1791
BclI	TGATCA	2 cut(s)	318, 1732
BcnI	CCSGG	3 cut(s)	224, 225, 812
BcoDI	GTCTC	3 cut(s)	370, 1074, 1940
BfaI	CTAG	6 cut(s)	867, 900, 1280, 1632, 1715, 1778
BfmI	CTRYAG	1 cut(s)	1980
BfoI	RGCGCY	1 cut(s)	350
BfrI	CTTAAG	1 cut(s)	1241
BfuAI	ACCTGC	1 cut(s)	1175
BfuI	GTATCC	2 cut(s)	207, 1791
BlnI	CCTAGG	1 cut(s)	866
BmcAI	AGTACT	3 cut(s)	296, 1055, 1110
Bme1390I	CCNGG	5 cut(s)	224, 225, 812, 1258, 1667
Bme18I	GGWCC	4 cut(s)	411, 814, 1635, 1828
BmeT110I	CYCGRG	2 cut(s)	223, 938
BmgT120I	GGNCC	6 cut(s)	411, 814, 1260, 1295, 1635, 1828
BmiI	GGNNCC	6 cut(s)	270, 399, 653, 815, 1296, 1637
BmrFI	CCNGG	5 cut(s)	224, 225, 812, 1258, 1667
BmrI	ACTGGG	1 cut(s)	181
BmsI	GCATC	4 cut(s)	965, 1471, 1532, 1555
BmuI	ACTGGG	1 cut(s)	181
BplI	GAGNNNNNCTC	2 cut(s)	350, 382
BpmI	CTGGAG	6 cut(s)	72, 749, 1251, 1346, 1916, 2016
Bpu14I	TTCGAA	1 cut(s)	246
BpuEI	CTTGAG	3 cut(s)	245, 827, 1357
BpuMI	CCSGG	3 cut(s)	224, 225, 812
BsaAI	YACGTR	1 cut(s)	477
BsaBI	GATNNNNATC	1 cut(s)	1710
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	370
BsaWI	WCCGGW	1 cut(s)	631
BsaXI	ACNNNNNCTCC	2 cut(s)	897, 927
Bsc4I	CCNNNNNNNGG	2 cut(s)	420, 823
Bse118I	RCCGGY	1 cut(s)	643
Bse1I	ACTGG	5 cut(s)	176, 280, 1234, 1329, 1769
Bse3DI	GCAATG	2 cut(s)	768, 1167
Bse8I	GATNNNNATC	1 cut(s)	1710
BseBI	CCWGG	2 cut(s)	1258, 1667
BseGI	GGATG	4 cut(s)	996, 1351, 1383, 1570
BseJI	GATNNNNATC	1 cut(s)	1710
BseLI	CCNNNNNNNGG	2 cut(s)	420, 823
BseMI	GCAATG	2 cut(s)	768, 1167
BseMII	CTCAG	6 cut(s)	167, 755, 788, 1062, 1374, 1518
BseNI	ACTGG	5 cut(s)	176, 280, 1234, 1329, 1769
BseRI	GAGGAG	4 cut(s)	371, 392, 918, 1928
BseSI	GKGCMC	3 cut(s)	1095, 1324, 1504
BseX3I	CGGCCG	3 cut(s)	65, 165, 236
BseXI	GCAGC	7 cut(s)	608, 1054, 1162, 1402, 1534, 1622, 1769
BseYI	CCCAGC	2 cut(s)	418, 908
BsgI	GTGCAG	1 cut(s)	1629
Bsh1236I	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
Bsh1285I	CGRYCG	3 cut(s)	68, 168, 239
BshFI	GGCC	6 cut(s)	67, 167, 238, 464, 1262, 1297
BsiEI	CGRYCG	3 cut(s)	68, 168, 239
BsiHKAI	GWGCWC	1 cut(s)	219
BsiHKCI	CYCGRG	2 cut(s)	223, 938
BsiSI	CCGG	7 cut(s)	224, 266, 336, 632, 644, 811, 1754
BsiWI	CGTACG	1 cut(s)	273
BslFI	GGGAC	4 cut(s)	188, 827, 1621, 1973
BslI	CCNNNNNNNGG	2 cut(s)	420, 823
BsmAI	GTCTC	3 cut(s)	370, 1074, 1940
BsmBI	CGTCTC	1 cut(s)	1074
BsmFI	GGGAC	4 cut(s)	188, 827, 1621, 1973
BsmI	GAATGC	1 cut(s)	1199
BsnI	GGCC	6 cut(s)	67, 167, 238, 464, 1262, 1297
Bso31I	GGTCTC	1 cut(s)	370
BsoBI	CYCGRG	2 cut(s)	223, 938
Bsp119I	TTCGAA	1 cut(s)	246
Bsp1286I	GDGCHC	5 cut(s)	219, 230, 1095, 1324, 1504
Bsp1407I	TGTACA	1 cut(s)	1475
Bsp143I	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
Bsp19I	CCATGG	1 cut(s)	1298
BspANI	GGCC	6 cut(s)	67, 167, 238, 464, 1262, 1297
BspCNI	CTCAG	6 cut(s)	166, 754, 789, 1063, 1375, 1519
BspFNI	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
BspLI	GGNNCC	6 cut(s)	270, 399, 653, 815, 1296, 1637
BspMI	ACCTGC	1 cut(s)	1175
BspPI	GGATC	5 cut(s)	137, 646, 659, 1713, 1745
BspQI	GCTCTTC	1 cut(s)	686
BspT104I	TTCGAA	1 cut(s)	246
BspTI	CTTAAG	1 cut(s)	1241
BspTNI	GGTCTC	1 cut(s)	370
BsrBI	CCGCTC	2 cut(s)	134, 259
BsrDI	GCAATG	2 cut(s)	768, 1167
BsrFI	RCCGGY	1 cut(s)	643
BsrGI	TGTACA	1 cut(s)	1475
BsrI	ACTGG	5 cut(s)	176, 280, 1234, 1329, 1769
BssAI	RCCGGY	1 cut(s)	643
BssMI	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
BssNI	GRCGYC	1 cut(s)	96
BssSI	CACGAG	1 cut(s)	229
BssT1I	CCWWGG	6 cut(s)	465, 621, 822, 866, 930, 1298
Bst2BI	CACGAG	1 cut(s)	229
Bst2UI	CCWGG	2 cut(s)	1258, 1667
Bst4CI	ACNGT	4 cut(s)	307, 780, 1267, 1945
Bst6I	CTCTTC	4 cut(s)	47, 663, 686, 1866
BstACI	GRCGYC	1 cut(s)	96
BstAFI	CTTAAG	1 cut(s)	1241
BstAUI	TGTACA	1 cut(s)	1475
BstBAI	YACGTR	1 cut(s)	477
BstBI	TTCGAA	1 cut(s)	246
BstC8I	GCNNGC	9 cut(s)	1087, 1091, 1212, 1500, 1521, 1629, 1789, 1973, 1977
BstDEI	CTNAG	9 cut(s)	153, 741, 797, 1041, 1071, 1102, 1383, 1527, 1741
BstDSI	CCRYGG	2 cut(s)	391, 1298
BstF5I	GGATG	4 cut(s)	996, 1351, 1383, 1570
BstFNI	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
BstH2I	RGCGCY	1 cut(s)	350
BstHHI	GCGC	6 cut(s)	64, 118, 349, 409, 810, 2035
BstKTI	GATC	9 cut(s)	145, 243, 321, 375, 618, 654, 1708, 1735, 1753
BstMAI	GTCTC	3 cut(s)	370, 1074, 1940
BstMBI	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
BstMCI	CGRYCG	3 cut(s)	68, 168, 239
BstMWI	GCNNNNNNNGC	7 cut(s)	415, 587, 596, 905, 1181, 1616, 2000
BstNI	CCWGG	2 cut(s)	1258, 1667
BstNSI	RCATGY	6 cut(s)	1158, 1453, 1547, 1631, 1678, 1979
BstSCI	CCNGG	5 cut(s)	222, 223, 810, 1256, 1665
BstSFI	CTRYAG	1 cut(s)	1980
BstSLI	GKGCMC	3 cut(s)	1095, 1324, 1504
BstUI	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
BstV1I	GCAGC	7 cut(s)	608, 1054, 1162, 1402, 1534, 1622, 1769
BstX2I	RGATCY	2 cut(s)	651, 1705
BstYI	RGATCY	2 cut(s)	651, 1705
BstZI	CGGCCG	3 cut(s)	65, 165, 236
BsuI	GTATCC	2 cut(s)	207, 1791
BsuRI	GGCC	6 cut(s)	67, 167, 238, 464, 1262, 1297
BtgI	CCRYGG	2 cut(s)	391, 1298
BtgZI	GCGATG	1 cut(s)	887
BtsCI	GGATG	4 cut(s)	996, 1351, 1383, 1570
BtsIMutI	CAGTG	4 cut(s)	312, 1263, 1322, 1941
BveI	ACCTGC	1 cut(s)	1175
Cac8I	GCNNGC	9 cut(s)	1087, 1091, 1212, 1500, 1521, 1629, 1789, 1973, 1977
CaiI	CAGNNNCTG	1 cut(s)	727
CfoI	GCGC	6 cut(s)	64, 118, 349, 409, 810, 2035
Cfr10I	RCCGGY	1 cut(s)	643
Cfr13I	GGNCC	6 cut(s)	411, 814, 1260, 1295, 1635, 1828
Cfr42I	CCGCGG	1 cut(s)	394
Cfr9I	CCCGGG	1 cut(s)	223
CpoI	CGGWCCG	1 cut(s)	411
CseI	GACGC	1 cut(s)	1091
CspI	CGGWCCG	1 cut(s)	411
DdeI	CTNAG	9 cut(s)	153, 741, 797, 1041, 1071, 1102, 1383, 1527, 1741
DpnI	GATC	9 cut(s)	144, 242, 320, 374, 617, 653, 1707, 1734, 1752
DpnII	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
EaeI	YGGCCR	3 cut(s)	65, 165, 236
EagI	CGGCCG	3 cut(s)	65, 165, 236
Eam1104I	CTCTTC	4 cut(s)	47, 663, 686, 1866
EarI	CTCTTC	4 cut(s)	47, 663, 686, 1866
Ecl136II	GAGCTC	1 cut(s)	217
EclXI	CGGCCG	3 cut(s)	65, 165, 236
Eco130I	CCWWGG	6 cut(s)	465, 621, 822, 866, 930, 1298
Eco24I	GRGCYC	2 cut(s)	219, 230
Eco31I	GGTCTC	1 cut(s)	370
Eco47I	GGWCC	4 cut(s)	411, 814, 1635, 1828
Eco52I	CGGCCG	3 cut(s)	65, 165, 236
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	1 cut(s)	1872
Eco88I	CYCGRG	2 cut(s)	223, 938
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1635
EcoRI	GAATTC	1 cut(s)	751
EcoRII	CCWGG	2 cut(s)	1256, 1665
EcoT14I	CCWWGG	6 cut(s)	465, 621, 822, 866, 930, 1298
EcoT22I	ATGCAT	2 cut(s)	1570, 1680
EcoT38I	GRGCYC	2 cut(s)	219, 230
ErhI	CCWWGG	6 cut(s)	465, 621, 822, 866, 930, 1298
Esp3I	CGTCTC	1 cut(s)	1074
FaqI	GGGAC	4 cut(s)	188, 827, 1621, 1973
FauI	CCCGC	6 cut(s)	118, 264, 386, 398, 1082, 1491
FbaI	TGATCA	2 cut(s)	318, 1732
FokI	GGATG	4 cut(s)	1003, 1358, 1390, 1577
FriOI	GRGCYC	2 cut(s)	219, 230
FspBI	CTAG	6 cut(s)	867, 900, 1280, 1632, 1715, 1778
GlaI	GCGC	6 cut(s)	63, 117, 348, 408, 809, 2034
GsaI	CCCAGC	2 cut(s)	422, 912
GsuI	CTGGAG	6 cut(s)	72, 749, 1251, 1346, 1916, 2016
HaeII	RGCGCY	1 cut(s)	350
HaeIII	GGCC	6 cut(s)	67, 167, 238, 464, 1262, 1297
HapII	CCGG	7 cut(s)	224, 266, 336, 632, 644, 811, 1754
HgaI	GACGC	1 cut(s)	1091
HhaI	GCGC	6 cut(s)	64, 118, 349, 409, 810, 2035
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	6 cut(s)	62, 116, 347, 407, 808, 2033
HinP1I	GCGC	6 cut(s)	62, 116, 347, 407, 808, 2033
HincII	GTYRAC	1 cut(s)	1190
HindII	GTYRAC	1 cut(s)	1190
HindIII	AAGCTT	2 cut(s)	572, 1789
HpaII	CCGG	7 cut(s)	224, 266, 336, 632, 644, 811, 1754
HphI	GGTGA	4 cut(s)	646, 658, 713, 899
Hpy166II	GTNNAC	3 cut(s)	440, 474, 1190
Hpy188III	TCNNGA	8 cut(s)	89, 100, 613, 728, 938, 1079, 1314, 1427
Hpy8I	GTNNAC	3 cut(s)	440, 474, 1190
Hpy99I	CGWCG	4 cut(s)	98, 125, 131, 151
HpyAV	CCTTC	4 cut(s)	739, 1057, 1348, 1895
HpyCH4III	ACNGT	4 cut(s)	307, 780, 1267, 1945
HpyCH4IV	ACGT	4 cut(s)	96, 476, 1606, 1723
HpyF10VI	GCNNNNNNNGC	7 cut(s)	415, 587, 596, 905, 1181, 1616, 2000
HpyF3I	CTNAG	9 cut(s)	153, 741, 797, 1041, 1071, 1102, 1383, 1527, 1741
HpySE526I	ACGT	4 cut(s)	96, 476, 1606, 1723
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	6 cut(s)	62, 116, 347, 407, 808, 2033
Ksp22I	TGATCA	2 cut(s)	318, 1732
KspI	CCGCGG	1 cut(s)	394
Kzo9I	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
LguI	GCTCTTC	1 cut(s)	686
LmnI	GCTCC	5 cut(s)	131, 268, 338, 662, 905
Lsp1109I	GCAGC	7 cut(s)	608, 1054, 1162, 1402, 1534, 1622, 1769
LweI	GCATC	4 cut(s)	965, 1471, 1532, 1555
MaeI	CTAG	6 cut(s)	867, 900, 1280, 1632, 1715, 1778
MaeII	ACGT	4 cut(s)	96, 476, 1606, 1723
MaeIII	GTNAC	3 cut(s)	1724, 1764, 1771
MalI	GATC	9 cut(s)	144, 242, 320, 374, 617, 653, 1707, 1734, 1752
MbiI	CCGCTC	2 cut(s)	134, 259
MboI	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
MflI	RGATCY	2 cut(s)	651, 1705
MhlI	GDGCHC	5 cut(s)	219, 230, 1095, 1324, 1504
MluCI	AATT	6 cut(s)	314, 751, 922, 1807, 1865, 2044
MlyI	GAGTC	8 cut(s)	145, 155, 182, 389, 620, 1337, 1835, 1915
MmeI	TCCRAC	2 cut(s)	170, 264
Mph1103I	ATGCAT	2 cut(s)	1570, 1680
MroXI	GAANNNNTTC	1 cut(s)	608
MseI	TTAA	4 cut(s)	570, 1008, 1242, 1337
MslI	CAYNNNNRTG	3 cut(s)	832, 1454, 1683
MspA1I	CMGCKG	3 cut(s)	393, 599, 1498
MspCI	CTTAAG	1 cut(s)	1241
MspI	CCGG	7 cut(s)	224, 266, 336, 632, 644, 811, 1754
MspR9I	CCNGG	5 cut(s)	224, 225, 812, 1258, 1667
Mva1269I	GAATGC	1 cut(s)	1199
MvaI	CCWGG	2 cut(s)	1258, 1667
MvnI	CGCG	6 cut(s)	64, 116, 393, 407, 409, 581
MwoI	GCNNNNNNNGC	7 cut(s)	415, 587, 596, 905, 1181, 1616, 2000
NciI	CCSGG	3 cut(s)	224, 225, 812
NcoI	CCATGG	1 cut(s)	1298
NdeII	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
NlaIV	GGNNCC	6 cut(s)	270, 399, 653, 815, 1296, 1637
NmeAIII	GCCGAG	4 cut(s)	143, 170, 616, 722
NmuCI	GTSAC	1 cut(s)	1771
NsiI	ATGCAT	2 cut(s)	1570, 1680
NspI	RCATGY	6 cut(s)	1158, 1453, 1547, 1631, 1678, 1979
NspV	TTCGAA	1 cut(s)	246
PaeI	GCATGC	2 cut(s)	1631, 1979
PaeR7I	CTCGAG	1 cut(s)	938
PasI	CCCWGGG	1 cut(s)	1257
PciSI	GCTCTTC	1 cut(s)	686
PcsI	WCGNNNNNNNCGW	3 cut(s)	183, 236, 411
PctI	GAATGC	1 cut(s)	1199
PdmI	GAANNNNTTC	1 cut(s)	608
PfeI	GAWTC	5 cut(s)	4, 724, 1075, 1423, 1463
Pfl23II	CGTACG	1 cut(s)	273
PflFI	GACNNNGTC	1 cut(s)	95
PleI	GAGTC	8 cut(s)	145, 155, 182, 388, 620, 1336, 1835, 1915
PpsI	GAGTC	8 cut(s)	145, 155, 182, 388, 620, 1336, 1835, 1915
Ppu21I	YACGTR	1 cut(s)	477
PpuMI	RGGWCCY	1 cut(s)	1635
PsiI	TTATAA	1 cut(s)	984
Psp124BI	GAGCTC	1 cut(s)	219
Psp1406I	AACGTT	1 cut(s)	1723
Psp5II	RGGWCCY	1 cut(s)	1635
Psp6I	CCWGG	2 cut(s)	1256, 1665
PspFI	CCCAGC	2 cut(s)	418, 908
PspGI	CCWGG	2 cut(s)	1256, 1665
PspLI	CGTACG	1 cut(s)	273
PspN4I	GGNNCC	6 cut(s)	270, 399, 653, 815, 1296, 1637
PspPI	GGNCC	6 cut(s)	411, 814, 1260, 1295, 1635, 1828
PspPPI	RGGWCCY	1 cut(s)	1635
PstNI	CAGNNNCTG	1 cut(s)	727
PsuI	RGATCY	2 cut(s)	651, 1705
PsyI	GACNNNGTC	1 cut(s)	95
PvuII	CAGCTG	1 cut(s)	599
RseI	CAYNNNNRTG	3 cut(s)	832, 1454, 1683
Rsr2I	CGGWCCG	1 cut(s)	411
RsrII	CGGWCCG	1 cut(s)	411
SacI	GAGCTC	1 cut(s)	219
SacII	CCGCGG	1 cut(s)	394
SapI	GCTCTTC	1 cut(s)	686
SaqAI	TTAA	4 cut(s)	570, 1008, 1242, 1337
Sau3AI	GATC	9 cut(s)	142, 240, 318, 372, 615, 651, 1705, 1732, 1750
Sau96I	GGNCC	6 cut(s)	411, 814, 1260, 1295, 1635, 1828
ScaI	AGTACT	3 cut(s)	296, 1055, 1110
SchI	GAGTC	8 cut(s)	145, 155, 182, 389, 620, 1337, 1835, 1915
ScrFI	CCNGG	5 cut(s)	224, 225, 812, 1258, 1667
SduI	GDGCHC	5 cut(s)	219, 230, 1095, 1324, 1504
SfaNI	GCATC	4 cut(s)	965, 1471, 1532, 1555
SfcI	CTRYAG	1 cut(s)	1980
Sfr274I	CTCGAG	1 cut(s)	938
Sfr303I	CCGCGG	1 cut(s)	394
SfuI	TTCGAA	1 cut(s)	246
SgrBI	CCGCGG	1 cut(s)	394
SinI	GGWCC	4 cut(s)	411, 814, 1635, 1828
SlaI	CTCGAG	1 cut(s)	938
SmaI	CCCGGG	1 cut(s)	225
SmiMI	CAYNNNNRTG	3 cut(s)	832, 1454, 1683
SmlI	CTYRAG	5 cut(s)	260, 842, 938, 1241, 1372
SmoI	CTYRAG	5 cut(s)	260, 842, 938, 1241, 1372
SphI	GCATGC	2 cut(s)	1631, 1979
Sse9I	AATT	6 cut(s)	314, 751, 922, 1807, 1865, 2044
SspI	AATATT	1 cut(s)	1917
SspMI	CTAG	6 cut(s)	867, 900, 1280, 1632, 1715, 1778
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	5 cut(s)	222, 223, 810, 1256, 1665
StyI	CCWWGG	6 cut(s)	465, 621, 822, 866, 930, 1298
TaaI	ACNGT	4 cut(s)	307, 780, 1267, 1945
TaiI	ACGT	4 cut(s)	99, 479, 1609, 1726
TaqI	TCGA	8 cut(s)	53, 219, 246, 311, 375, 515, 939, 1078
TasI	AATT	6 cut(s)	314, 751, 922, 1807, 1865, 2044
TatI	WGTACW	5 cut(s)	294, 1053, 1108, 1368, 1475
TauI	GCSGC	8 cut(s)	67, 116, 137, 238, 494, 504, 1175, 2011
TfiI	GAWTC	5 cut(s)	4, 724, 1075, 1423, 1463
Tru1I	TTAA	4 cut(s)	570, 1008, 1242, 1337
Tru9I	TTAA	4 cut(s)	570, 1008, 1242, 1337
TscAI	CASTG	4 cut(s)	312, 1270, 1329, 1948
TseFI	GTSAC	1 cut(s)	1771
TseI	GCWGC	7 cut(s)	596, 1067, 1175, 1415, 1547, 1610, 1757
Tsp45I	GTSAC	1 cut(s)	1771
TspDTI	ATGAA	7 cut(s)	17, 939, 1156, 1214, 1554, 1617, 2037
TspGWI	ACGGA	5 cut(s)	144, 316, 403, 1452, 1946
TspMI	CCCGGG	1 cut(s)	223
TspRI	CASTG	4 cut(s)	312, 1270, 1329, 1948
Tth111I	GACNNNGTC	1 cut(s)	95
Vha464I	CTTAAG	1 cut(s)	1241
VpaK11BI	GGWCC	4 cut(s)	411, 814, 1635, 1828
XapI	RAATTY	1 cut(s)	751
XceI	RCATGY	6 cut(s)	1158, 1453, 1547, 1631, 1678, 1979
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1321, 1663, 1822
XhoI	CTCGAG	1 cut(s)	938
XmaI	CCCGGG	1 cut(s)	223
XmaJI	CCTAGG	1 cut(s)	866
XmnI	GAANNNNTTC	1 cut(s)	608
XspI	CTAG	6 cut(s)	867, 900, 1280, 1632, 1715, 1778
ZraI	GACGTC	1 cut(s)	97
ZrmI	AGTACT	3 cut(s)	296, 1055, 1110
Zsp2I	ATGCAT	2 cut(s)	1570, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.