Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Reverse (-)

35809602 .. 35812051

Gene Structure 2450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1227600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGACTTTTGCAGCTCGAAGGCTCCTCTTCTCTCTCCTGATTTTCTCTCTCTACCCCCTCTCTCTCTCCGCCCGTCCCTTCATCCTCGTCCTGACAAAAGACGACCTCCTAAACACCCCCGCCTCGCCCGATGACTCGCCGCCCGCCGCCGACTCAGCTCCAAATGACTCCCCCGACTGGGACGAGTTCGGCGAATCCGCCGCCGCGCAGTCCGAGGAGGAGCTCGACCCGGGCTCCTGGCGCCCAATCTTCGAACCCGACCCCTTCAAGCCCGACCCGGCCACCCACCCCGACGACGGATACTACTCCACCGTCTCCAAATTAATCAAGTCCATCAGCTCCGGAGACACTGCCCTCGTGGACGAGGCCGTTTCGGAGATCGAGGACTCGGCTTCTCGCGGCGTCCCCCACGCGCGGTCCGTGGTGGGGTTTCTGTACGGTACGGGGCAGATGAGAAAGCAGAACAAGGCCAAGGCTTTCACGTACCATTACTTCGCCGCCGAGGGCGGCAACATGCAGTCGAAGATGGCCCTCGCGTATACTTACTTCAGGCAAGATATGTTTGATAAAGCGGTGAAATTGTACTCGGAATTGGCCGATGCAGCTGTGAATAGCTTCCTGATTTCGAGGGACTCGCCGGTGATCGAGGCGGTGAGGATCCACAGCGGAGCGGAGGAGAACAAGGATGCGTTGAGGAAGAGCCGCGGCGAAGAAGACGAGGACTTTCAGATTTTGGAGTACCAAGCTCAGAAGGGAAACTCCGCGGCAATGTATAAGGTCGGCCTGTTTTACTATTTCGGGCTGAGAGGGTTGCGCCGCGACCATGCCAAGGCATTGTCGTGGTTTCTGAAGGCTTTGGAGAAGGGAGAGCCTCGGGCTATGGAGCTCCTCGGAGAGATTTATGCTAGAGGAGCCGGTGTTGAGAGGAATTACACCAAGGCTCTGGAGTGGCTTACACTCGCAGCCAAACAGGATCATTTTTCGGCCTACAACGGAATGGGGTATTTGTATGTTAAAGGATATGGAGTGGAGAAGAAGAACTACACTAAAGCAAAGGAGTATTTTGAAAAGGCTGCTGATAATCAAGACAGTGGCGGTCACTATAACCTAGGAGTAATGTATCTCAAAGGAATTGGGGTAAAGAGAGATGTTAAACTTGCATGTCAATACTTTATATATGCTGCTAATGCTGGTCAACCTAAGGCATTCTACCAGCTAGGGAAGATGTTTCATACTGGAGTTGGGCTTAAGAAAAATCTTCCACGGGCCACTGCATTATACAAATTAGTTGCAGAAAGGGGACCATGGAGTTCCTTGTCCCGATGGGCACTTGAATCGTACTTGAAAGGGGACGTGGGCAAGGCATTTTTCTTGTATTCAAGGATGGCCGAGTTAGGCTATGAGGTAGCACAGAGTAACGCTGCATGGATTCTTGACAAATATGGGGAGCAAAGCGTGTGCATAGGAGAATCCGGTTTGTGCACTGATGCAGAAAGGCATCAGCGGGCACATTCATTATGGTGGCAAGCATCCGAGCAGGGTAATGAACACGCTGCTTTGCTGATTGGGGATGCGTATTACTATGGTCAGGTAGGGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

534

Amino Acids

59.45

Weight (kDa)

5.96

Isoelectric Point (pI)

43.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	254 - 289	1.1e-07	Sel1 repeat
Sel1	PF08238	291 - 326	7.8e-09	Sel1 repeat
Sel1	PF08238	328 - 362	3.2e-07	Sel1 repeat
Sel1	PF08238	367 - 398	5.9e-07	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	240
AccBSI	CCGCTC	1 cut(s)	671
AccI	GTMKAC	1 cut(s)	539
AccII	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
AccIII	TCCGGA	1 cut(s)	341
AclWI	GGATC	3 cut(s)	652, 665, 981
AcoI	YGGCCR	3 cut(s)	279, 594, 1386
AcuI	CTGAAG	2 cut(s)	532, 869
AcyI	GRCGYC	2 cut(s)	241, 402
AfaI	GTAC	7 cut(s)	437, 442, 485, 584, 740, 1340, 1598
AfiI	CCNNNNNNNGG	6 cut(s)	177, 178, 296, 414, 426, 829
AflII	CTTAAG	1 cut(s)	1247
AgsI	TTSAA	5 cut(s)	268, 1067, 1334, 1345, 1380
AjiI	CACGTC	1 cut(s)	1354
AjnI	CCWGG	1 cut(s)	236
AluBI	AGCT	9 cut(s)	14, 158, 223, 339, 605, 615, 746, 886, 1216
AluI	AGCT	9 cut(s)	14, 158, 223, 339, 605, 615, 746, 886, 1216
Alw21I	GWGCWC	3 cut(s)	225, 888, 1484
Alw26I	GTCTC	2 cut(s)	319, 339
Alw44I	GTGCAC	1 cut(s)	1480
AlwI	GGATC	3 cut(s)	652, 665, 981
Ama87I	CYCGRG	2 cut(s)	229, 873
Aor13HI	TCCGGA	1 cut(s)	341
AoxI	GGCC	9 cut(s)	279, 366, 468, 528, 594, 781, 984, 1266, 1386
ApaLI	GTGCAC	1 cut(s)	1480
ApeKI	GCWGC	7 cut(s)	11, 602, 962, 1073, 1181, 1421, 1553
AseI	ATTAAT	1 cut(s)	323
Asp700I	GAANNNNTTC	1 cut(s)	614
AspA2I	CCTAGG	1 cut(s)	1108
AspLEI	GCGC	4 cut(s)	208, 243, 415, 816
AspS9I	GGNCC	4 cut(s)	417, 529, 1266, 1301
AsuC2I	CCSGG	3 cut(s)	230, 231, 278
AsuHPI	GGTGA	3 cut(s)	586, 652, 664
AsuII	TTCGAA	1 cut(s)	252
AvaI	CYCGRG	2 cut(s)	229, 873
AvaII	GGWCC	2 cut(s)	417, 1301
AvrII	CCTAGG	1 cut(s)	1108
AxyI	CCTNAGG	1 cut(s)	1200
BaeGI	GKGCMC	3 cut(s)	1330, 1484, 1510
BamHI	GGATCC	1 cut(s)	657
BanI	GGYRCC	1 cut(s)	240
BanII	GRGCYC	3 cut(s)	225, 236, 888
BarI	GAAGNNNNNNTAC	6 cut(s)	476, 508, 530, 562, 1025, 1057
BauI	CACGAG	1 cut(s)	356
BbsI	GAAGAC	1 cut(s)	720
Bbv12I	GWGCWC	3 cut(s)	225, 888, 1484
BbvI	GCAGC	7 cut(s)	23, 614, 974, 1060, 1168, 1408, 1540
BccI	CCATC	4 cut(s)	341, 520, 1317, 1378
BceAI	ACGGC	1 cut(s)	353
BcgI	CGANNNNNNTGC	2 cut(s)	1317, 1351
BciT130I	CCWGG	1 cut(s)	238
BciVI	GTATCC	1 cut(s)	293
BcnI	CCSGG	3 cut(s)	230, 231, 278
BcoDI	GTCTC	2 cut(s)	319, 339
BfaI	CTAG	3 cut(s)	906, 1109, 1217
BfoI	RGCGCY	1 cut(s)	244
BfrI	CTTAAG	1 cut(s)	1247
BfuI	GTATCC	1 cut(s)	293
BlnI	CCTAGG	1 cut(s)	1108
Bme1390I	CCNGG	4 cut(s)	230, 231, 238, 278
Bme18I	GGWCC	2 cut(s)	417, 1301
BmeT110I	CYCGRG	2 cut(s)	229, 873
BmgBI	CACGTC	1 cut(s)	1354
BmgT120I	GGNCC	4 cut(s)	417, 529, 1266, 1301
BmiI	GGNNCC	6 cut(s)	23, 235, 242, 659, 913, 1302
BmrFI	CCNGG	4 cut(s)	230, 231, 238, 278
BmrI	ACTGGG	1 cut(s)	187
BmsI	GCATC	6 cut(s)	589, 676, 1477, 1507, 1538, 1561
BmuI	ACTGGG	1 cut(s)	187
BpiI	GAAGAC	1 cut(s)	720
BpmI	CTGGAG	2 cut(s)	965, 1257
Bpu14I	TTCGAA	1 cut(s)	252
BpuMI	CCSGG	3 cut(s)	230, 231, 278
BsaAI	YACGTR	1 cut(s)	483
BsaHI	GRCGYC	2 cut(s)	241, 402
BsaWI	WCCGGW	2 cut(s)	341, 1472
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 903, 933
Bsc4I	CCNNNNNNNGG	6 cut(s)	177, 178, 296, 414, 426, 829
Bse118I	RCCGGY	2 cut(s)	637, 914
Bse1I	ACTGG	2 cut(s)	182, 1240
Bse21I	CCTNAGG	1 cut(s)	1200
Bse3DI	GCAATG	1 cut(s)	774
BseAI	TCCGGA	1 cut(s)	341
BseBI	CCWGG	1 cut(s)	238
BseGI	GGATG	5 cut(s)	81, 691, 1389, 1529, 1576
BseLI	CCNNNNNNNGG	6 cut(s)	177, 178, 296, 414, 426, 829
BseMI	GCAATG	1 cut(s)	774
BseMII	CTCAG	3 cut(s)	168, 761, 794
BseNI	ACTGG	2 cut(s)	182, 1240
BseRI	GAGGAG	6 cut(s)	14, 230, 233, 689, 878, 924
BseSI	GKGCMC	3 cut(s)	1330, 1484, 1510
BseXI	GCAGC	7 cut(s)	23, 614, 974, 1060, 1168, 1408, 1540
Bsh1236I	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
BshFI	GGCC	9 cut(s)	281, 368, 470, 530, 596, 783, 986, 1268, 1388
BshNI	GGYRCC	1 cut(s)	240
BsiHKAI	GWGCWC	3 cut(s)	225, 888, 1484
BsiHKCI	CYCGRG	2 cut(s)	229, 873
BsiSI	CCGG	6 cut(s)	230, 278, 342, 638, 915, 1473
BslFI	GGGAC	7 cut(s)	60, 194, 389, 644, 1303, 1314, 1364
BslI	CCNNNNNNNGG	6 cut(s)	177, 178, 296, 414, 426, 829
BsmAI	GTCTC	2 cut(s)	319, 339
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	7 cut(s)	60, 194, 389, 644, 1303, 1314, 1364
BsmI	GAATGC	1 cut(s)	1205
BsnI	GGCC	9 cut(s)	281, 368, 470, 530, 596, 783, 986, 1268, 1388
BsoBI	CYCGRG	2 cut(s)	229, 873
Bsp119I	TTCGAA	1 cut(s)	252
Bsp1286I	GDGCHC	6 cut(s)	225, 236, 888, 1330, 1484, 1510
Bsp13I	TCCGGA	1 cut(s)	341
Bsp143I	GATC	4 cut(s)	378, 642, 657, 973
Bsp19I	CCATGG	1 cut(s)	1304
BspANI	GGCC	9 cut(s)	281, 368, 470, 530, 596, 783, 986, 1268, 1388
BspCNI	CTCAG	3 cut(s)	167, 760, 795
BspEI	TCCGGA	1 cut(s)	341
BspFNI	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
BspLI	GGNNCC	6 cut(s)	23, 235, 242, 659, 913, 1302
BspPI	GGATC	3 cut(s)	652, 665, 981
BspQI	GCTCTTC	1 cut(s)	692
BspT104I	TTCGAA	1 cut(s)	252
BspT107I	GGYRCC	1 cut(s)	240
BspTI	CTTAAG	1 cut(s)	1247
BsrBI	CCGCTC	1 cut(s)	671
BsrDI	GCAATG	1 cut(s)	774
BsrFI	RCCGGY	2 cut(s)	637, 914
BsrI	ACTGG	2 cut(s)	182, 1240
BssAI	RCCGGY	2 cut(s)	637, 914
BssMI	GATC	4 cut(s)	378, 642, 657, 973
BssNAI	GTATAC	1 cut(s)	540
BssNI	GRCGYC	2 cut(s)	241, 402
BssSI	CACGAG	1 cut(s)	356
BssT1I	CCWWGG	5 cut(s)	471, 828, 936, 1108, 1304
Bst1107I	GTATAC	1 cut(s)	540
Bst2BI	CACGAG	1 cut(s)	356
Bst2UI	CCWGG	1 cut(s)	238
Bst4CI	ACNGT	3 cut(s)	313, 440, 1091
Bst6I	CTCTTC	2 cut(s)	32, 692
BstACI	GRCGYC	2 cut(s)	241, 402
BstAFI	CTTAAG	1 cut(s)	1247
BstBAI	YACGTR	1 cut(s)	483
BstBI	TTCGAA	1 cut(s)	252
BstC8I	GCNNGC	3 cut(s)	144, 1506, 1527
BstDEI	CTNAG	4 cut(s)	154, 747, 803, 1200
BstDSI	CCRYGG	5 cut(s)	420, 703, 762, 1262, 1304
BstF5I	GGATG	5 cut(s)	81, 691, 1389, 1529, 1576
BstFNI	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	4 cut(s)	208, 243, 415, 816
BstKTI	GATC	4 cut(s)	381, 645, 660, 976
BstMAI	GTCTC	2 cut(s)	319, 339
BstMBI	GATC	4 cut(s)	378, 642, 657, 973
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 240, 602, 911, 1187
BstNI	CCWGG	1 cut(s)	238
BstNSI	RCATGY	2 cut(s)	517, 1164
BstSCI	CCNGG	4 cut(s)	228, 229, 236, 276
BstSLI	GKGCMC	3 cut(s)	1330, 1484, 1510
BstUI	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
BstV1I	GCAGC	7 cut(s)	23, 614, 974, 1060, 1168, 1408, 1540
BstV2I	GAAGAC	1 cut(s)	720
BstX2I	RGATCY	1 cut(s)	657
BstXI	CCANNNNNNTGG	1 cut(s)	943
BstYI	RGATCY	1 cut(s)	657
BstZ17I	GTATAC	1 cut(s)	540
Bsu36I	CCTNAGG	1 cut(s)	1200
BsuI	GTATCC	1 cut(s)	293
BsuRI	GGCC	9 cut(s)	281, 368, 470, 530, 596, 783, 986, 1268, 1388
BtgI	CCRYGG	5 cut(s)	420, 703, 762, 1262, 1304
BtrI	CACGTC	1 cut(s)	1354
BtsCI	GGATG	5 cut(s)	81, 691, 1389, 1529, 1576
BtsI	GCAGTG	2 cut(s)	348, 1269
BtsIMutI	CAGTG	4 cut(s)	348, 1096, 1269, 1482
Cac8I	GCNNGC	3 cut(s)	144, 1506, 1527
CfoI	GCGC	4 cut(s)	208, 243, 415, 816
Cfr10I	RCCGGY	2 cut(s)	637, 914
Cfr13I	GGNCC	4 cut(s)	417, 529, 1266, 1301
Cfr42I	CCGCGG	2 cut(s)	706, 765
Cfr9I	CCCGGG	1 cut(s)	229
CpoI	CGGWCCG	1 cut(s)	417
CseI	GACGC	1 cut(s)	391
Csp6I	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1339, 1597
CspI	CGGWCCG	1 cut(s)	417
CviAII	CATG	5 cut(s)	514, 824, 1161, 1305, 1425
CviQI	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1339, 1597
DdeI	CTNAG	4 cut(s)	154, 747, 803, 1200
DinI	GGCGCC	1 cut(s)	242
DpnI	GATC	4 cut(s)	380, 644, 659, 975
DpnII	GATC	4 cut(s)	378, 642, 657, 973
EaeI	YGGCCR	3 cut(s)	279, 594, 1386
Eam1104I	CTCTTC	2 cut(s)	32, 692
EarI	CTCTTC	2 cut(s)	32, 692
EciI	GGCGGA	2 cut(s)	58, 187
Ecl136II	GAGCTC	2 cut(s)	223, 886
Eco130I	CCWWGG	5 cut(s)	471, 828, 936, 1108, 1304
Eco24I	GRGCYC	3 cut(s)	225, 236, 888
Eco47I	GGWCC	2 cut(s)	417, 1301
Eco53kI	GAGCTC	2 cut(s)	223, 886
Eco57I	CTGAAG	2 cut(s)	532, 869
Eco81I	CCTNAGG	1 cut(s)	1200
Eco88I	CYCGRG	2 cut(s)	229, 873
EcoICRI	GAGCTC	2 cut(s)	223, 886
EcoRII	CCWGG	1 cut(s)	236
EcoT14I	CCWWGG	5 cut(s)	471, 828, 936, 1108, 1304
EcoT38I	GRGCYC	3 cut(s)	225, 236, 888
EgeI	GGCGCC	1 cut(s)	242
EheI	GGCGCC	1 cut(s)	242
ErhI	CCWWGG	5 cut(s)	471, 828, 936, 1108, 1304
Esp3I	CGTCTC	1 cut(s)	319
FaeI	CATG	5 cut(s)	517, 827, 1164, 1308, 1428
FaqI	GGGAC	7 cut(s)	60, 194, 389, 644, 1303, 1314, 1364
FatI	CATG	5 cut(s)	513, 823, 1160, 1304, 1424
FauI	CCCGC	3 cut(s)	127, 151, 1497
FblI	GTMKAC	1 cut(s)	539
FokI	GGATG	5 cut(s)	68, 698, 1396, 1516, 1583
FriOI	GRGCYC	3 cut(s)	225, 236, 888
FspBI	CTAG	3 cut(s)	906, 1109, 1217
GlaI	GCGC	4 cut(s)	207, 242, 414, 815
GsuI	CTGGAG	2 cut(s)	965, 1257
HaeII	RGCGCY	1 cut(s)	244
HaeIII	GGCC	9 cut(s)	281, 368, 470, 530, 596, 783, 986, 1268, 1388
HapII	CCGG	6 cut(s)	230, 278, 342, 638, 915, 1473
HgaI	GACGC	1 cut(s)	391
HhaI	GCGC	4 cut(s)	208, 243, 415, 816
Hin1I	GRCGYC	2 cut(s)	241, 402
Hin1II	CATG	5 cut(s)	517, 827, 1164, 1308, 1428
Hin6I	GCGC	4 cut(s)	206, 241, 413, 814
HinP1I	GCGC	4 cut(s)	206, 241, 413, 814
HincII	GTYRAC	1 cut(s)	1196
HindII	GTYRAC	1 cut(s)	1196
HinfI	GANTC	9 cut(s)	134, 152, 167, 194, 386, 632, 1334, 1429, 1469
HpaII	CCGG	6 cut(s)	230, 278, 342, 638, 915, 1473
HphI	GGTGA	3 cut(s)	586, 652, 664
Hpy166II	GTNNAC	4 cut(s)	361, 540, 1196, 1482
Hpy188I	TCNGA	8 cut(s)	214, 376, 589, 729, 750, 849, 893, 1534
Hpy188III	TCNNGA	8 cut(s)	37, 91, 342, 619, 944, 1085, 1320, 1433
Hpy8I	GTNNAC	4 cut(s)	361, 540, 1196, 1482
Hpy99I	CGWCG	2 cut(s)	296, 299
HpyAV	CCTTC	6 cut(s)	12, 88, 274, 745, 844, 856
HpyCH4III	ACNGT	3 cut(s)	313, 440, 1091
HpyCH4IV	ACGT	2 cut(s)	482, 1353
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 240, 602, 911, 1187
HpyF3I	CTNAG	4 cut(s)	154, 747, 803, 1200
HpySE526I	ACGT	2 cut(s)	482, 1353
Hsp92I	GRCGYC	2 cut(s)	241, 402
Hsp92II	CATG	5 cut(s)	517, 827, 1164, 1308, 1428
HspAI	GCGC	4 cut(s)	206, 241, 413, 814
KasI	GGCGCC	1 cut(s)	240
Kpn2I	TCCGGA	1 cut(s)	341
KspI	CCGCGG	2 cut(s)	706, 765
Kzo9I	GATC	4 cut(s)	378, 642, 657, 973
LguI	GCTCTTC	1 cut(s)	692
Lsp1109I	GCAGC	7 cut(s)	23, 614, 974, 1060, 1168, 1408, 1540
LweI	GCATC	6 cut(s)	589, 676, 1477, 1507, 1538, 1561
MaeI	CTAG	3 cut(s)	906, 1109, 1217
MaeII	ACGT	2 cut(s)	482, 1353
MaeIII	GTNAC	2 cut(s)	1097, 1415
MalI	GATC	4 cut(s)	380, 644, 659, 975
MbiI	CCGCTC	1 cut(s)	671
MboI	GATC	4 cut(s)	378, 642, 657, 973
MflI	RGATCY	1 cut(s)	657
MhlI	GDGCHC	6 cut(s)	225, 236, 888, 1330, 1484, 1510
MluCI	AATT	6 cut(s)	320, 578, 590, 928, 1131, 1283
Mly113I	GGCGCC	1 cut(s)	241
MlyI	GAGTC	5 cut(s)	128, 146, 161, 380, 626
MroI	TCCGGA	1 cut(s)	341
MroXI	GAANNNNTTC	1 cut(s)	614
MseI	TTAA	4 cut(s)	323, 1014, 1152, 1248
MslI	CAYNNNNRTG	2 cut(s)	838, 1519
MspA1I	CMGCKG	5 cut(s)	605, 666, 705, 764, 1504
MspCI	CTTAAG	1 cut(s)	1247
MspI	CCGG	6 cut(s)	230, 278, 342, 638, 915, 1473
MspR9I	CCNGG	4 cut(s)	230, 231, 238, 278
Mva1269I	GAATGC	1 cut(s)	1205
MvaI	CCWGG	1 cut(s)	238
MvnI	CGCG	8 cut(s)	206, 399, 413, 415, 536, 705, 764, 819
MwoI	GCNNNNNNNGC	5 cut(s)	155, 240, 602, 911, 1187
NarI	GGCGCC	1 cut(s)	241
NciI	CCSGG	3 cut(s)	230, 231, 278
NcoI	CCATGG	1 cut(s)	1304
NdeII	GATC	4 cut(s)	378, 642, 657, 973
NlaIII	CATG	5 cut(s)	517, 827, 1164, 1308, 1428
NlaIV	GGNNCC	6 cut(s)	23, 235, 242, 659, 913, 1302
NmeAIII	GCCGAG	3 cut(s)	368, 526, 1414
NmuCI	GTSAC	1 cut(s)	1097
NspI	RCATGY	2 cut(s)	517, 1164
NspV	TTCGAA	1 cut(s)	252
PciSI	GCTCTTC	1 cut(s)	692
PcsI	WCGNNNNNNNCGW	2 cut(s)	189, 417
PctI	GAATGC	1 cut(s)	1205
PdmI	GAANNNNTTC	1 cut(s)	614
PfeI	GAWTC	4 cut(s)	194, 1334, 1429, 1469
PleI	GAGTC	5 cut(s)	128, 146, 161, 380, 626
PluTI	GGCGCC	1 cut(s)	244
PpsI	GAGTC	5 cut(s)	128, 146, 161, 380, 626
Ppu21I	YACGTR	1 cut(s)	483
PshBI	ATTAAT	1 cut(s)	323
Psp124BI	GAGCTC	2 cut(s)	225, 888
Psp6I	CCWGG	1 cut(s)	236
PspGI	CCWGG	1 cut(s)	236
PspN4I	GGNNCC	6 cut(s)	23, 235, 242, 659, 913, 1302
PspPI	GGNCC	4 cut(s)	417, 529, 1266, 1301
PsuI	RGATCY	1 cut(s)	657
PvuII	CAGCTG	1 cut(s)	605
RsaI	GTAC	7 cut(s)	437, 442, 485, 584, 740, 1340, 1598
RsaNI	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1339, 1597
RseI	CAYNNNNRTG	2 cut(s)	838, 1519
Rsr2I	CGGWCCG	1 cut(s)	417
RsrII	CGGWCCG	1 cut(s)	417
SacI	GAGCTC	2 cut(s)	225, 888
SacII	CCGCGG	2 cut(s)	706, 765
SapI	GCTCTTC	1 cut(s)	692
SaqAI	TTAA	4 cut(s)	323, 1014, 1152, 1248
Sau3AI	GATC	4 cut(s)	378, 642, 657, 973
Sau96I	GGNCC	4 cut(s)	417, 529, 1266, 1301
SchI	GAGTC	5 cut(s)	128, 146, 161, 380, 626
ScrFI	CCNGG	4 cut(s)	230, 231, 238, 278
SduI	GDGCHC	6 cut(s)	225, 236, 888, 1330, 1484, 1510
SfaNI	GCATC	6 cut(s)	589, 676, 1477, 1507, 1538, 1561
SfoI	GGCGCC	1 cut(s)	242
Sfr303I	CCGCGG	2 cut(s)	706, 765
SfuI	TTCGAA	1 cut(s)	252
SgrAI	CRCCGGYG	1 cut(s)	637
SgrBI	CCGCGG	2 cut(s)	706, 765
SinI	GGWCC	2 cut(s)	417, 1301
SmaI	CCCGGG	1 cut(s)	231
SmiMI	CAYNNNNRTG	2 cut(s)	838, 1519
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
Sse9I	AATT	6 cut(s)	320, 578, 590, 928, 1131, 1283
SspDI	GGCGCC	1 cut(s)	240
SspMI	CTAG	3 cut(s)	906, 1109, 1217
SstI	GAGCTC	2 cut(s)	225, 888
StyD4I	CCNGG	4 cut(s)	228, 229, 236, 276
StyI	CCWWGG	5 cut(s)	471, 828, 936, 1108, 1304
TaaI	ACNGT	3 cut(s)	313, 440, 1091
TaiI	ACGT	2 cut(s)	485, 1356
TaqI	TCGA	7 cut(s)	16, 225, 252, 381, 521, 626, 645
TasI	AATT	6 cut(s)	320, 578, 590, 928, 1131, 1283
TatI	WGTACW	1 cut(s)	582
TfiI	GAWTC	4 cut(s)	194, 1334, 1429, 1469
Tru1I	TTAA	4 cut(s)	323, 1014, 1152, 1248
Tru9I	TTAA	4 cut(s)	323, 1014, 1152, 1248
TscAI	CASTG	4 cut(s)	355, 1096, 1276, 1489
TseFI	GTSAC	1 cut(s)	1097
TseI	GCWGC	7 cut(s)	11, 602, 962, 1073, 1181, 1421, 1553
Tsp45I	GTSAC	1 cut(s)	1097
TspDTI	ATGAA	4 cut(s)	70, 1220, 1503, 1560
TspGWI	ACGGA	3 cut(s)	312, 409, 1008
TspMI	CCCGGG	1 cut(s)	229
TspRI	CASTG	4 cut(s)	355, 1096, 1276, 1489
Vha464I	CTTAAG	1 cut(s)	1247
VneI	GTGCAC	1 cut(s)	1480
VpaK11BI	GGWCC	2 cut(s)	417, 1301
VspI	ATTAAT	1 cut(s)	323
XceI	RCATGY	2 cut(s)	517, 1164
XmaI	CCCGGG	1 cut(s)	229
XmaJI	CCTAGG	1 cut(s)	1108
XmiI	GTMKAC	1 cut(s)	539
XmnI	GAANNNNTTC	1 cut(s)	614
XspI	CTAG	3 cut(s)	906, 1109, 1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.