Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Forward (+)

953431 .. 956893

Gene Structure 3463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGATCTGGTGAATCGGAAACTGGTTTTCGCGGCGGTGGCGGTTTTCTCTCTCTCCGCCGTCACGATTTTCGCGCGGCCGTTTGTTCTGGTTCTCTCACAAGACGACCTCCTAAACGCCGCTAACCCGGCCGACGGCGGCGACGCTCCCGCCGCCGATCCGACTCAGAATGACTCGGCCGACTGGGACGAGTTCGGCGACTCGGCGTATCCGCAATCCGAGGAGGAGCTCGACCCGGGCTCGTGGCGTCCCATCTTCGAACCCGGCCCGTTCAAGCCCGACCTGTCCGCCCACCCGGACAAGGAGTACTACTCCACCGTGTCGAAATTGGTCGACTCCGTCAGCTCCGGCGACACGGCGCTCATGGAGGACGCGGTTTCCGAGATCGAGGCGTCCGCTGCCCGCGGTGTGCCTCACGCGCGGTCGGTGCTCGGGTTTCTGTTCGGCACGGGACAGATGAGGAAGCAGAACAAGGCCAAGGCGTTCACGTACCATTACTTCGCCGCGGAGGGCGGCAATATGCAGTCGAAGATGGCTCTGGCTTATACTTACTTTAGGCAAGATATGTTTGAGAAAGCGGTGAAGCTGTACTCGGAATTAGCCGAGGCAGCTGTGAATAGCTTCTTGATTTCAAAGGACTCTCCGGTGATTGAGCCGGTGAGGATCCACAATGGAGCTGAAGAGAATAAGGAGGCATTGAGGAAAAGCCGAGGCGAAGAAGATGAGGACTTTCAGATTCTGGAGTATCAGGCTCAGAAGGGGAACTCTCTTGCAATGTATAAGATTGGCCTCTTTTACTATTTCGGGCTCAGAGGGTTGCGCCGCGACCATGCTAAGGCATTGTCGTGGTTTCTCAAGTCTGTGGAGAAGGGAGAGCCTAGGGCTATGGAGTTTCTTGCTGAGATTTATGCTAGAGGAGCTGGGGTTGAGAGGAATTACACTAGGGCTCTGGAGTGGTTTACATTAGCATCTAAACAAGAACTGAATTCGGCTTATAATGGGATGGGCTATTTGTATGTTAAAGGATATGGAGTGGAGAAGAAGAACTACACTAAGGCAAAAGAGTACTTTGAGAAGGCTGCTGAGAATCGAGATGCTGGTGGCGGGCACTATAACTTGGGAGTACTCTATCTCAAAGGGATTGGGGTAAAAAAAGATGTGAAACTTGCATGTCAGTACTTTATAGTGGCTGCTAATGCAGGTCAACCAAAGGCATTCTACCAGCTTGCAAAGATGTTTCATGCAGGAGTGGGGCTTAAGAAAAATCTTCCCAGGGCTACTGTGTTGTACAAACTAGTTGCTGAAAGGGGGCCATGGAGTTCCTTGTCCAGATGGGCCCTGGAGTCATACTTAAAGGGGGATGTGGGGAAGGCATTTTTCTTATACTCAAGGATGGCTGAGTTAGGGTATGAGGTAGCGCAAAGTAACGCTGCATGGATTCTTGACAAGTACGGAGAACATAGCATGTGCATGGGAGAATCTGGCTTTTGTACAGATGCAGAAAGGCATCAGCGGGCACATTCTTTGTGGTGGCAAGCATCTGAGCAGGGTAACGAACATGCTGCTTTGCTGATTGGGGATGCATATTACTATGGTCAGGGTACTGAGAGGGATTTTGAACGTGCAGCAGAGGCTTACAAGCATGCTAGGTCCCAATCTAATGCACAAGCCATGTTCAACCTCGGCTACATGCATGAGCATGGACAAGGATTACCTTTGGATCTCCATCTTGCCAAACGTTACTATGATCAAGCCCTAGAGATTGATCCGGCAGCAAAGTTACCAGTCACGCTAGCCCTTGCAAGCTTATGGATACGAAAGAATTATGCCGATGGTTTTCTGGTCCATGTGATCGACTCATTGCCTGAAGTCTATCCAAAATTGGAAGAATGGATAGATGACGTGTTGCTTGAGGAAGGAAATGCAACAATATTGACTCTTTTTGTTTGTCTCCTCACTGTCCTATATCTCCGTGAGCGACAACGCAGGCATGCTGTAGTAGTCCCTGCTGGAGTGGCTATGCCGCACCAACCAAATGAACTTGTTGCACCTGCACCTGTCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

688

Amino Acids

76.87

Weight (kDa)

5.84

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	257 - 291	1.8e-06	Sel1 repeat
Sel1	PF08238	293 - 326	6.3e-07	Sel1 repeat
Sel1	PF08238	330 - 363	4.1e-07	Sel1 repeat
Sel1	PF08238	370 - 401	7e-06	Sel1 repeat
Sel1	PF08238	555 - 586	5.4e-07	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	996
AarI	CACCTGC	1 cut(s)	2059
Acc36I	ACCTGC	2 cut(s)	1190, 2059
AccI	GTMKAC	1 cut(s)	333
AccII	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
AclI	AACGTT	1 cut(s)	1738
AclWI	GGATC	6 cut(s)	12, 152, 658, 671, 1728, 1760
AcoI	YGGCCR	3 cut(s)	77, 129, 177
AcsI	RAATTY	1 cut(s)	985
AcuI	CTGAAG	2 cut(s)	699, 1887
AcyI	GRCGYC	2 cut(s)	247, 392
AfiI	CCNNNNNNNGG	3 cut(s)	134, 301, 835
AflII	CTTAAG	1 cut(s)	1256
AflIII	ACRYGT	1 cut(s)	1902
AgsI	TTSAA	4 cut(s)	274, 633, 1619, 1678
AhlI	ACTAGT	1 cut(s)	1294
AjiI	CACGTC	1 cut(s)	1903
AjnI	CCWGG	2 cut(s)	1271, 1338
AluBI	AGCT	9 cut(s)	229, 345, 586, 611, 621, 677, 920, 1225, 1806
AluI	AGCT	9 cut(s)	229, 345, 586, 611, 621, 677, 920, 1225, 1806
Alw21I	GWGCWC	2 cut(s)	231, 432
Alw26I	GTCTC	1 cut(s)	1955
AlwI	GGATC	6 cut(s)	12, 152, 658, 671, 1728, 1760
AlwNI	CAGNNNCTG	1 cut(s)	739
Ama87I	CYCGRG	2 cut(s)	235, 431
AoxI	GGCC	8 cut(s)	77, 129, 177, 265, 474, 787, 1310, 1335
ApaI	GGGCCC	1 cut(s)	1339
ApeKI	GCWGC	8 cut(s)	398, 608, 1079, 1190, 1430, 1562, 1625, 1772
ApoI	RAATTY	1 cut(s)	985
Asp700I	GAANNNNTTC	1 cut(s)	620
AspA2I	CCTAGG	1 cut(s)	878
AspLEI	GCGC	5 cut(s)	76, 361, 421, 822, 1420
AspS9I	GGNCC	6 cut(s)	266, 1310, 1335, 1336, 1650, 1843
AsuC2I	CCSGG	5 cut(s)	128, 236, 237, 264, 296
AsuHPI	GGTGA	4 cut(s)	22, 592, 658, 670
AsuII	TTCGAA	1 cut(s)	258
AsuNHI	GCTAGC	1 cut(s)	1792
AvaI	CYCGRG	2 cut(s)	235, 431
AvaII	GGWCC	2 cut(s)	1650, 1843
AvrII	CCTAGG	1 cut(s)	878
BaeGI	GKGCMC	3 cut(s)	1110, 1339, 1519
BamHI	GGATCC	1 cut(s)	663
BanII	GRGCYC	5 cut(s)	231, 242, 810, 949, 1339
BarI	GAAGNNNNNNTAC	4 cut(s)	482, 514, 1031, 1063
BauI	CACGAG	1 cut(s)	241
Bbv12I	GWGCWC	2 cut(s)	231, 432
BbvI	GCAGC	8 cut(s)	385, 620, 1066, 1177, 1417, 1549, 1637, 1784
BccI	CCATC	7 cut(s)	260, 526, 997, 1326, 1387, 1734, 1826
BceAI	ACGGC	4 cut(s)	44, 64, 151, 372
BcgI	CGANNNNNNTGC	2 cut(s)	1544, 1578
BciT130I	CCWGG	2 cut(s)	1273, 1340
BciVI	GTATCC	2 cut(s)	219, 1806
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	5 cut(s)	128, 236, 237, 264, 296
BcoDI	GTCTC	1 cut(s)	1955
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	7 cut(s)	879, 912, 942, 1295, 1647, 1757, 1793
BfmI	CTRYAG	1 cut(s)	1995
BfoI	RGCGCY	1 cut(s)	362
BfrI	CTTAAG	1 cut(s)	1256
BfuAI	ACCTGC	2 cut(s)	1190, 2059
BfuI	GTATCC	2 cut(s)	219, 1806
BlnI	CCTAGG	1 cut(s)	878
BmcAI	AGTACT	4 cut(s)	308, 1067, 1125, 1178
Bme1390I	CCNGG	7 cut(s)	128, 236, 237, 264, 296, 1273, 1340
Bme18I	GGWCC	2 cut(s)	1650, 1843
BmeT110I	CYCGRG	2 cut(s)	235, 431
BmgBI	CACGTC	1 cut(s)	1903
BmgT120I	GGNCC	6 cut(s)	266, 1310, 1335, 1336, 1650, 1843
BmiI	GGNNCC	4 cut(s)	665, 1311, 1337, 1652
BmrFI	CCNGG	7 cut(s)	128, 236, 237, 264, 296, 1273, 1340
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	6 cut(s)	977, 1084, 1486, 1516, 1547, 1570
BmtI	GCTAGC	1 cut(s)	1796
BmuI	ACTGGG	1 cut(s)	193
BplI	GAGNNNNNCTC	2 cut(s)	296, 328
BpmI	CTGGAG	4 cut(s)	761, 971, 1361, 2031
Bpu10I	CCTNAGC	1 cut(s)	834
Bpu14I	TTCGAA	1 cut(s)	258
BpuEI	CTTGAG	3 cut(s)	839, 1372, 1931
BpuMI	CCSGG	5 cut(s)	128, 236, 237, 264, 296
BsaAI	YACGTR	1 cut(s)	489
BsaBI	GATNNNNATC	1 cut(s)	1725
BsaHI	GRCGYC	2 cut(s)	247, 392
BsaWI	WCCGGW	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	909, 939
Bsc4I	CCNNNNNNNGG	3 cut(s)	134, 301, 835
Bse118I	RCCGGY	1 cut(s)	655
Bse1I	ACTGG	3 cut(s)	27, 188, 1784
Bse3DI	GCAATG	2 cut(s)	780, 1859
Bse8I	GATNNNNATC	1 cut(s)	1725
BseBI	CCWGG	2 cut(s)	1273, 1340
BseGI	GGATG	4 cut(s)	1008, 1366, 1398, 1585
BseJI	GATNNNNATC	1 cut(s)	1725
BseLI	CCNNNNNNNGG	3 cut(s)	134, 301, 835
BseMI	GCAATG	2 cut(s)	780, 1859
BseMII	CTCAG	8 cut(s)	179, 767, 823, 891, 1074, 1389, 1533, 1596
BseNI	ACTGG	3 cut(s)	27, 188, 1784
BseRI	GAGGAG	4 cut(s)	236, 239, 930, 1943
BseSI	GKGCMC	3 cut(s)	1110, 1339, 1519
BseX3I	CGGCCG	3 cut(s)	77, 129, 177
BseXI	GCAGC	8 cut(s)	385, 620, 1066, 1177, 1417, 1549, 1637, 1784
BseYI	CCCAGC	1 cut(s)	920
BsgI	GTGCAG	2 cut(s)	1644, 2037
Bsh1236I	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
Bsh1285I	CGRYCG	4 cut(s)	80, 132, 180, 425
BshFI	GGCC	8 cut(s)	79, 131, 179, 267, 476, 789, 1312, 1337
BsiEI	CGRYCG	4 cut(s)	80, 132, 180, 425
BsiHKAI	GWGCWC	2 cut(s)	231, 432
BsiHKCI	CYCGRG	2 cut(s)	235, 431
BsiSI	CCGG	8 cut(s)	128, 236, 264, 296, 348, 644, 656, 1769
BslFI	GGGAC	5 cut(s)	200, 234, 465, 1636, 1988
BslI	CCNNNNNNNGG	3 cut(s)	134, 301, 835
BsmAI	GTCTC	1 cut(s)	1955
BsmFI	GGGAC	5 cut(s)	200, 234, 465, 1636, 1988
BsmI	GAATGC	1 cut(s)	1214
BsnI	GGCC	8 cut(s)	79, 131, 179, 267, 476, 789, 1312, 1337
BsoBI	CYCGRG	2 cut(s)	235, 431
Bsp119I	TTCGAA	1 cut(s)	258
Bsp120I	GGGCCC	1 cut(s)	1335
Bsp1286I	GDGCHC	8 cut(s)	231, 242, 432, 810, 949, 1110, 1339, 1519
Bsp1407I	TGTACA	2 cut(s)	1287, 1490
Bsp143I	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
Bsp19I	CCATGG	1 cut(s)	1313
BspANI	GGCC	8 cut(s)	79, 131, 179, 267, 476, 789, 1312, 1337
BspCNI	CTCAG	8 cut(s)	178, 766, 822, 892, 1075, 1390, 1534, 1597
BspFNI	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
BspLI	GGNNCC	4 cut(s)	665, 1311, 1337, 1652
BspMI	ACCTGC	2 cut(s)	1190, 2059
BspOI	GCTAGC	1 cut(s)	1796
BspPI	GGATC	6 cut(s)	12, 152, 658, 671, 1728, 1760
BspT104I	TTCGAA	1 cut(s)	258
BspTI	CTTAAG	1 cut(s)	1256
BsrDI	GCAATG	2 cut(s)	780, 1859
BsrFI	RCCGGY	1 cut(s)	655
BsrGI	TGTACA	2 cut(s)	1287, 1490
BsrI	ACTGG	3 cut(s)	27, 188, 1784
BssAI	RCCGGY	1 cut(s)	655
BssMI	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
BssNI	GRCGYC	2 cut(s)	247, 392
BssSI	CACGAG	1 cut(s)	241
BssT1I	CCWWGG	3 cut(s)	477, 878, 1313
Bst2BI	CACGAG	1 cut(s)	241
Bst2UI	CCWGG	2 cut(s)	1273, 1340
Bst4CI	ACNGT	3 cut(s)	319, 1282, 1960
Bst6I	CTCTTC	1 cut(s)	675
BstACI	GRCGYC	2 cut(s)	247, 392
BstAFI	CTTAAG	1 cut(s)	1256
BstAUI	TGTACA	2 cut(s)	1287, 1490
BstBAI	YACGTR	1 cut(s)	489
BstBI	TTCGAA	1 cut(s)	258
BstDSI	CCRYGG	3 cut(s)	403, 504, 1313
BstF5I	GGATG	4 cut(s)	1008, 1366, 1398, 1585
BstFNI	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
BstH2I	RGCGCY	1 cut(s)	362
BstHHI	GCGC	5 cut(s)	76, 361, 421, 822, 1420
BstKTI	GATC	8 cut(s)	7, 160, 387, 666, 1723, 1750, 1768, 1854
BstMAI	GTCTC	1 cut(s)	1955
BstMBI	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
BstMCI	CGRYCG	4 cut(s)	80, 132, 180, 425
BstNI	CCWGG	2 cut(s)	1273, 1340
BstNSI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
BstSCI	CCNGG	7 cut(s)	126, 234, 235, 262, 294, 1271, 1338
BstSFI	CTRYAG	1 cut(s)	1995
BstSLI	GKGCMC	3 cut(s)	1110, 1339, 1519
BstUI	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
BstV1I	GCAGC	8 cut(s)	385, 620, 1066, 1177, 1417, 1549, 1637, 1784
BstX2I	RGATCY	3 cut(s)	4, 663, 1720
BstYI	RGATCY	3 cut(s)	4, 663, 1720
BstZI	CGGCCG	3 cut(s)	77, 129, 177
BsuI	GTATCC	2 cut(s)	219, 1806
BsuRI	GGCC	8 cut(s)	79, 131, 179, 267, 476, 789, 1312, 1337
BtgI	CCRYGG	3 cut(s)	403, 504, 1313
BtrI	CACGTC	1 cut(s)	1903
BtsCI	GGATG	4 cut(s)	1008, 1366, 1398, 1585
BtsIMutI	CAGTG	1 cut(s)	1956
BveI	ACCTGC	2 cut(s)	1190, 2059
CaiI	CAGNNNCTG	1 cut(s)	739
CfoI	GCGC	5 cut(s)	76, 361, 421, 822, 1420
Cfr10I	RCCGGY	1 cut(s)	655
Cfr13I	GGNCC	6 cut(s)	266, 1310, 1335, 1336, 1650, 1843
Cfr42I	CCGCGG	2 cut(s)	406, 507
Cfr9I	CCCGGG	1 cut(s)	235
CseI	GACGC	4 cut(s)	152, 236, 380, 381
DpnI	GATC	8 cut(s)	6, 159, 386, 665, 1722, 1749, 1767, 1853
DpnII	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
EaeI	YGGCCR	3 cut(s)	77, 129, 177
EagI	CGGCCG	3 cut(s)	77, 129, 177
Eam1104I	CTCTTC	1 cut(s)	675
EarI	CTCTTC	1 cut(s)	675
EciI	GGCGGA	2 cut(s)	46, 277
Ecl136II	GAGCTC	1 cut(s)	229
EclXI	CGGCCG	3 cut(s)	77, 129, 177
Eco130I	CCWWGG	3 cut(s)	477, 878, 1313
Eco24I	GRGCYC	5 cut(s)	231, 242, 810, 949, 1339
Eco47I	GGWCC	2 cut(s)	1650, 1843
Eco52I	CGGCCG	3 cut(s)	77, 129, 177
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	2 cut(s)	699, 1887
Eco88I	CYCGRG	2 cut(s)	235, 431
EcoICRI	GAGCTC	1 cut(s)	229
EcoO109I	RGGNCCY	2 cut(s)	1336, 1650
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	2 cut(s)	1271, 1338
EcoT14I	CCWWGG	3 cut(s)	477, 878, 1313
EcoT22I	ATGCAT	2 cut(s)	1585, 1695
EcoT38I	GRGCYC	5 cut(s)	231, 242, 810, 949, 1339
ErhI	CCWWGG	3 cut(s)	477, 878, 1313
FaqI	GGGAC	5 cut(s)	200, 234, 465, 1636, 1988
FauI	CCCGC	4 cut(s)	157, 410, 1097, 1506
FbaI	TGATCA	1 cut(s)	1747
FblI	GTMKAC	1 cut(s)	333
FokI	GGATG	4 cut(s)	1015, 1373, 1405, 1592
FriOI	GRGCYC	5 cut(s)	231, 242, 810, 949, 1339
FspBI	CTAG	7 cut(s)	879, 912, 942, 1295, 1647, 1757, 1793
GlaI	GCGC	5 cut(s)	75, 360, 420, 821, 1419
GsaI	CCCAGC	1 cut(s)	924
GsuI	CTGGAG	4 cut(s)	761, 971, 1361, 2031
HaeII	RGCGCY	1 cut(s)	362
HaeIII	GGCC	8 cut(s)	79, 131, 179, 267, 476, 789, 1312, 1337
HapII	CCGG	8 cut(s)	128, 236, 264, 296, 348, 644, 656, 1769
HgaI	GACGC	4 cut(s)	152, 236, 380, 381
HhaI	GCGC	5 cut(s)	76, 361, 421, 822, 1420
Hin1I	GRCGYC	2 cut(s)	247, 392
Hin6I	GCGC	5 cut(s)	74, 359, 419, 820, 1418
HinP1I	GCGC	5 cut(s)	74, 359, 419, 820, 1418
HincII	GTYRAC	2 cut(s)	334, 1205
HindII	GTYRAC	2 cut(s)	334, 1205
HindIII	AAGCTT	1 cut(s)	1804
HpaII	CCGG	8 cut(s)	128, 236, 264, 296, 348, 644, 656, 1769
HphI	GGTGA	4 cut(s)	22, 592, 658, 670
Hpy166II	GTNNAC	4 cut(s)	334, 486, 960, 1205
Hpy188III	TCNNGA	7 cut(s)	64, 625, 740, 950, 1091, 1329, 1442
Hpy8I	GTNNAC	4 cut(s)	334, 486, 960, 1205
Hpy99I	CGWCG	2 cut(s)	137, 146
HpyAV	CCTTC	5 cut(s)	751, 862, 1069, 1363, 1910
HpyCH4III	ACNGT	3 cut(s)	319, 1282, 1960
HpyCH4IV	ACGT	4 cut(s)	488, 1621, 1738, 1902
HpySE526I	ACGT	4 cut(s)	488, 1621, 1738, 1902
Hsp92I	GRCGYC	2 cut(s)	247, 392
HspAI	GCGC	5 cut(s)	74, 359, 419, 820, 1418
Ksp22I	TGATCA	1 cut(s)	1747
KspI	CCGCGG	2 cut(s)	406, 507
Kzo9I	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
LmnI	GCTCC	5 cut(s)	151, 226, 350, 674, 917
Lsp1109I	GCAGC	8 cut(s)	385, 620, 1066, 1177, 1417, 1549, 1637, 1784
LweI	GCATC	6 cut(s)	977, 1084, 1486, 1516, 1547, 1570
MaeI	CTAG	7 cut(s)	879, 912, 942, 1295, 1647, 1757, 1793
MaeII	ACGT	4 cut(s)	488, 1621, 1738, 1902
MaeIII	GTNAC	6 cut(s)	61, 1424, 1550, 1739, 1779, 1786
MalI	GATC	8 cut(s)	6, 159, 386, 665, 1722, 1749, 1767, 1853
MboI	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
MboII	GAAGA	9 cut(s)	247, 541, 692, 728, 731, 1051, 1054, 1259, 1898
MflI	RGATCY	3 cut(s)	4, 663, 1720
MhlI	GDGCHC	8 cut(s)	231, 242, 432, 810, 949, 1110, 1339, 1519
MluCI	AATT	6 cut(s)	326, 596, 934, 985, 1822, 1880
MlyI	GAGTC	8 cut(s)	157, 167, 194, 329, 632, 1352, 1850, 1930
MmeI	TCCRAC	1 cut(s)	185
Mph1103I	ATGCAT	2 cut(s)	1585, 1695
MroXI	GAANNNNTTC	1 cut(s)	620
MseI	TTAA	3 cut(s)	1020, 1257, 1352
MslI	CAYNNNNRTG	3 cut(s)	844, 1469, 1698
MspA1I	CMGCKG	5 cut(s)	398, 405, 506, 611, 1513
MspCI	CTTAAG	1 cut(s)	1256
MspI	CCGG	8 cut(s)	128, 236, 264, 296, 348, 644, 656, 1769
MspR9I	CCNGG	7 cut(s)	128, 236, 237, 264, 296, 1273, 1340
Mva1269I	GAATGC	1 cut(s)	1214
MvaI	CCWGG	2 cut(s)	1273, 1340
MvnI	CGCG	9 cut(s)	32, 74, 76, 374, 405, 419, 421, 506, 825
NciI	CCSGG	5 cut(s)	128, 236, 237, 264, 296
NcoI	CCATGG	1 cut(s)	1313
NdeII	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
NheI	GCTAGC	1 cut(s)	1792
NlaIV	GGNNCC	4 cut(s)	665, 1311, 1337, 1652
NmeAIII	GCCGAG	5 cut(s)	155, 182, 628, 734, 1662
NmuCI	GTSAC	2 cut(s)	61, 1786
NsiI	ATGCAT	2 cut(s)	1585, 1695
NspI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
NspV	TTCGAA	1 cut(s)	258
PaeI	GCATGC	2 cut(s)	1646, 1994
PaqCI	CACCTGC	1 cut(s)	2059
PasI	CCCWGGG	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	2 cut(s)	195, 378
PctI	GAATGC	1 cut(s)	1214
PdmI	GAANNNNTTC	1 cut(s)	620
PfeI	GAWTC	5 cut(s)	13, 736, 1087, 1438, 1478
PflFI	GACNNNGTC	1 cut(s)	338
PleI	GAGTC	8 cut(s)	157, 167, 194, 329, 632, 1351, 1850, 1930
PpsI	GAGTC	8 cut(s)	157, 167, 194, 329, 632, 1351, 1850, 1930
Ppu21I	YACGTR	1 cut(s)	489
PpuMI	RGGWCCY	1 cut(s)	1650
PsiI	TTATAA	1 cut(s)	996
Psp124BI	GAGCTC	1 cut(s)	231
Psp1406I	AACGTT	1 cut(s)	1738
Psp5II	RGGWCCY	1 cut(s)	1650
Psp6I	CCWGG	2 cut(s)	1271, 1338
PspFI	CCCAGC	1 cut(s)	920
PspGI	CCWGG	2 cut(s)	1271, 1338
PspN4I	GGNNCC	4 cut(s)	665, 1311, 1337, 1652
PspOMI	GGGCCC	1 cut(s)	1335
PspPI	GGNCC	6 cut(s)	266, 1310, 1335, 1336, 1650, 1843
PspPPI	RGGWCCY	1 cut(s)	1650
PstNI	CAGNNNCTG	1 cut(s)	739
PsuI	RGATCY	3 cut(s)	4, 663, 1720
PsyI	GACNNNGTC	1 cut(s)	338
PvuII	CAGCTG	1 cut(s)	611
RseI	CAYNNNNRTG	3 cut(s)	844, 1469, 1698
SacI	GAGCTC	1 cut(s)	231
SacII	CCGCGG	2 cut(s)	406, 507
SalI	GTCGAC	1 cut(s)	332
SaqAI	TTAA	3 cut(s)	1020, 1257, 1352
Sau3AI	GATC	8 cut(s)	4, 157, 384, 663, 1720, 1747, 1765, 1851
Sau96I	GGNCC	6 cut(s)	266, 1310, 1335, 1336, 1650, 1843
ScaI	AGTACT	4 cut(s)	308, 1067, 1125, 1178
SchI	GAGTC	8 cut(s)	157, 167, 194, 329, 632, 1352, 1850, 1930
ScrFI	CCNGG	7 cut(s)	128, 236, 237, 264, 296, 1273, 1340
SduI	GDGCHC	8 cut(s)	231, 242, 432, 810, 949, 1110, 1339, 1519
SfaNI	GCATC	6 cut(s)	977, 1084, 1486, 1516, 1547, 1570
SfcI	CTRYAG	1 cut(s)	1995
Sfr303I	CCGCGG	2 cut(s)	406, 507
SfuI	TTCGAA	1 cut(s)	258
SgrBI	CCGCGG	2 cut(s)	406, 507
SinI	GGWCC	2 cut(s)	1650, 1843
SmaI	CCCGGG	1 cut(s)	237
SmiMI	CAYNNNNRTG	3 cut(s)	844, 1469, 1698
SmlI	CTYRAG	4 cut(s)	854, 1256, 1387, 1910
SmoI	CTYRAG	4 cut(s)	854, 1256, 1387, 1910
SpeI	ACTAGT	1 cut(s)	1294
SphI	GCATGC	2 cut(s)	1646, 1994
Sse9I	AATT	6 cut(s)	326, 596, 934, 985, 1822, 1880
SspI	AATATT	1 cut(s)	1932
SspMI	CTAG	7 cut(s)	879, 912, 942, 1295, 1647, 1757, 1793
SstI	GAGCTC	1 cut(s)	231
StyD4I	CCNGG	7 cut(s)	126, 234, 235, 262, 294, 1271, 1338
StyI	CCWWGG	3 cut(s)	477, 878, 1313
TaaI	ACNGT	3 cut(s)	319, 1282, 1960
TaiI	ACGT	4 cut(s)	491, 1624, 1741, 1905
TaqI	TCGA	8 cut(s)	231, 258, 323, 333, 387, 527, 1090, 1854
TasI	AATT	6 cut(s)	326, 596, 934, 985, 1822, 1880
TatI	WGTACW	7 cut(s)	306, 588, 1065, 1123, 1176, 1287, 1490
TauI	GCSGC	9 cut(s)	35, 79, 122, 141, 155, 506, 516, 825, 2026
TfiI	GAWTC	5 cut(s)	13, 736, 1087, 1438, 1478
Tru1I	TTAA	3 cut(s)	1020, 1257, 1352
Tru9I	TTAA	3 cut(s)	1020, 1257, 1352
TscAI	CASTG	1 cut(s)	1963
TseFI	GTSAC	2 cut(s)	61, 1786
TseI	GCWGC	8 cut(s)	398, 608, 1079, 1190, 1430, 1562, 1625, 1772
Tsp45I	GTSAC	2 cut(s)	61, 1786
TspDTI	ATGAA	2 cut(s)	1229, 2052
TspGWI	ACGGA	3 cut(s)	328, 1467, 1961
TspMI	CCCGGG	1 cut(s)	235
TspRI	CASTG	1 cut(s)	1963
Tth111I	GACNNNGTC	1 cut(s)	338
Vha464I	CTTAAG	1 cut(s)	1256
VpaK11BI	GGWCC	2 cut(s)	1650, 1843
XapI	RAATTY	1 cut(s)	985
XceI	RCATGY	6 cut(s)	1173, 1468, 1562, 1646, 1693, 1994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1336
XmaI	CCCGGG	1 cut(s)	235
XmaJI	CCTAGG	1 cut(s)	878
XmiI	GTMKAC	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	620
XspI	CTAG	7 cut(s)	879, 912, 942, 1295, 1647, 1757, 1793
ZrmI	AGTACT	4 cut(s)	308, 1067, 1125, 1178
Zsp2I	ATGCAT	2 cut(s)	1585, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.