Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Reverse (-)

17767490 .. 17771663

Gene Structure 4174 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G234000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGAATTTTGCAACTCGAAAACTCATCTTCGCTCTCCTGATTGTCTTTCTCTACCCCCTCTCTCTCTTCGCTCGGCCATATTTCCTCGTCCTCTCTAAAGACGACCTCTTAAACACCCCCAACTCGCCCGACGACTCGACTCAAAATGACTCGCCCGAGTGGGATGAGTTTGGCGACTCCGGCTCCCCACAGTCCGAGGAGGAGCTCGACCCGGGCTCCTGGCGCCCCATCTTCGAGCCCGACCCCTTTAGGCCCGACCTGGCCAACAACCCGGACGAACGCTACTACTCCACCGTAACCAAATTAATCAAGTCCGTCAGCTCCGGCGACACGACGCTCATGGACGACGCCGTTTCGGAGATCGAGGAATCAGCTTCCCGCGGTCTCCCTCACGCGCGGTCCGTGCTGGGGTTTCTGTACGCTACGGGCCAGATGAGGAAGCAGAACAAAGCCAAGGCCTTCACGTACCACTACTTCGCTTCCGAGGGTGGTAACATGCAGTCGAAGATGGCTCTCGCTTATACTTACTCTAGGCAAGATATGTTTGATAAAGCAGTGAAGCTGTACTCGGAATTAGCCGAGGCAGCAGTGAATAGCTTCCTAATTTCGAAGGACTCGCCGGTGATCGAGCCAGTGAGGATCCACAATGGAGCTGAGGAGAACAAGGAGGCATTGAGGAAGAGCAGAGGCGAAGAAGATGAGGACTTTCAGATTTTGGAGTACCAAGCTCAGAAGGGAAACTCTGCGGCAATGTATAAGATTGGTCTCTTTTACTATTTTGGGCTGAGAGGGTTGAGGCGCGACCATGCCAAGGCGTTGTCGTGGTTTTTGAAGGCGTTGGAGAAGGGAGAGCCTCGGGCGATGGAGCTGCTTGGGGAGATTTATGCTAGAGGAGCTGGGGTTGAGAGGAATTACACCAAGGCTCTGGAGTGGCTTACACTCGCAGCCAAACAGGAGCTTTATTCAGCCTATAACGGGATGGGCTATTTGTATGTTAAAGGATATGGGGTGGAGAAGAAGAACCTCACCAAAGCAAAAGAGTATTTTGAGAAGGCTGCTGATAATGAAGACGCAGGGGGGCACTATAACCTAGGAGTAATGTATCTCAAAGGGATTGGGGTAACGAGAGATGTGAAACTTGCATGTCAATACTTTATAGTGGCTGCTAATGCTGGTCAACCCAAGGCATTCTACCAGCTGGGAAAGATGTTTCATACTGGAGTTGGGCTTAAGAAAAATCTTCCCAGGGCCACTGTATTGTACAAACTAGTTGCAGAAAGGGGACCGTGGAACTCCTTGTCCAGATGGGCACTAGAATCGTACTTAAAAGGGGACATGGGCAAGGCATTCTTCTTGTATTCAAGGATGGCTGAGTTAGGCTATGAGGTAGCGCAAAGTAACGCTGCATGGATTCTTGACAAATATGGAGAACGTAGCATGTGCATAGGAGAATCCGGTTTCTGCACGGATGCAGAAAGGCATCAGCGTGCTCATTCATTGTGGTGGCAAGCATCTGAGCAGGGTAATGAACATGCTGCTTTGCTGATTGGGGATGCATATTACTATGGTCAGGGTACTGAGAGAGATTATGACCGTGCGGCAGAGGCTTACAAGCATGCCAGGTCCCAGTCTAATGCACAAGCCATGTTCAACCTTGGTTACATGCATGAGCATGGACAAGGGCTGCCTTTGGATCTTCATCTCGCGAAGCGTTACTATGATCAAGCTCTAGAGATTGATCAGGCAGCAAAATTGCCTGTCACATTAGCCCTTACAAGCTTATGGATACGAAAAAATTATGCCGATGGTTTCCTGGTCCATGTGATCGATTCATTGCCTGAAGTTTATCCCAAGGTGGAAGAATGGGTAGATAATGTGCTTCTAGAGGAAGGAAATGCGACAATATTGACTCTTTTTGTTTGTCTCCTCACTGTCCTATATCTTCGTGAGCGACAACGCAGGCATGCTGTTGCTGCCCCTGGTGGGATGGCTGTGCCACACCACCCGAATGAGCATGTTGCACCAGCACCCGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

679

Amino Acids

76.47

Weight (kDa)

5.97

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	222
AccII	CGCG	5 cut(s)	381, 395, 397, 801, 1706
AciI	CCGC	5 cut(s)	379, 381, 397, 746, 1598
AclWI	GGATC	3 cut(s)	634, 647, 1701
AcoI	YGGCCR	2 cut(s)	74, 261
AcsI	RAATTY	1 cut(s)	4
AcuI	CTGAAG	1 cut(s)	1860
AcyI	GRCGYC	2 cut(s)	223, 348
AfaI	GTAC	7 cut(s)	419, 467, 566, 722, 1262, 1322, 1576
AfiI	CCNNNNNNNGG	4 cut(s)	408, 811, 975, 1983
AflII	CTTAAG	1 cut(s)	1229
AgsI	TTSAA	3 cut(s)	832, 1362, 1651
AhlI	ACTAGT	1 cut(s)	1267
AjnI	CCWGG	6 cut(s)	218, 258, 1244, 1619, 1812, 1978
AloI	GAACNNNNNNTCC	2 cut(s)	1283, 1315
Alw21I	GWGCWC	2 cut(s)	207, 1492
Alw26I	GTCTC	3 cut(s)	389, 770, 1928
AlwI	GGATC	3 cut(s)	634, 647, 1701
Ama87I	CYCGRG	3 cut(s)	155, 211, 855
AoxI	GGCC	6 cut(s)	74, 251, 261, 427, 456, 1248
ApoI	RAATTY	1 cut(s)	4
AseI	ATTAAT	1 cut(s)	305
Asp700I	GAANNNNTTC	1 cut(s)	596
AspA2I	CCTAGG	1 cut(s)	1090
AspLEI	GCGC	4 cut(s)	225, 397, 801, 1393
AspS9I	GGNCC	7 cut(s)	252, 399, 427, 1248, 1283, 1623, 1816
AsuC2I	CCSGG	3 cut(s)	212, 213, 272
AsuHPI	GGTGA	2 cut(s)	634, 1018
AsuII	TTCGAA	1 cut(s)	608
AvaI	CYCGRG	3 cut(s)	155, 211, 855
AvaII	GGWCC	4 cut(s)	399, 1283, 1623, 1816
AvrII	CCTAGG	1 cut(s)	1090
BaeGI	GKGCMC	2 cut(s)	1083, 1312
BalI	TGGCCA	1 cut(s)	263
BamHI	GGATCC	1 cut(s)	639
BanI	GGYRCC	1 cut(s)	222
BanII	GRGCYC	3 cut(s)	207, 218, 240
BarI	GAAGNNNNNNTAC	2 cut(s)	458, 490
BbsI	GAAGAC	1 cut(s)	1074
Bbv12I	GWGCWC	2 cut(s)	207, 1492
BbvCI	CCTCAGC	1 cut(s)	654
BccI	CCATC	8 cut(s)	236, 502, 856, 973, 1299, 1360, 1799, 1981
BceAI	ACGGC	1 cut(s)	335
BcgI	CGANNNNNNTGC	4 cut(s)	850, 884, 1299, 1333
BciT130I	CCWGG	6 cut(s)	220, 260, 1246, 1621, 1814, 1980
BciVI	GTATCC	1 cut(s)	1779
BclI	TGATCA	2 cut(s)	1720, 1738
BcnI	CCSGG	3 cut(s)	212, 213, 272
BcoDI	GTCTC	3 cut(s)	389, 770, 1928
BcuI	ACTAGT	1 cut(s)	1267
BfaI	CTAG	7 cut(s)	531, 888, 1091, 1268, 1313, 1730, 1883
BfoI	RGCGCY	1 cut(s)	226
BfrI	CTTAAG	1 cut(s)	1229
BfuI	GTATCC	1 cut(s)	1779
BlnI	CCTAGG	1 cut(s)	1090
Bme1390I	CCNGG	9 cut(s)	212, 213, 220, 260, 272, 1246, 1621, 1814, 1980
Bme18I	GGWCC	4 cut(s)	399, 1283, 1623, 1816
BmeT110I	CYCGRG	3 cut(s)	155, 211, 855
BmgT120I	GGNCC	7 cut(s)	252, 399, 427, 1248, 1283, 1623, 1816
BmiI	GGNNCC	6 cut(s)	184, 217, 224, 641, 1284, 1625
BmrFI	CCNGG	9 cut(s)	212, 213, 220, 260, 272, 1246, 1621, 1814, 1980
BmrI	ACTGGG	1 cut(s)	1621
BmsI	GCATC	4 cut(s)	1459, 1489, 1520, 1543
BmuI	ACTGGG	1 cut(s)	1621
BpiI	GAAGAC	1 cut(s)	1074
BpmI	CTGGAG	2 cut(s)	947, 1239
Bpu10I	CCTNAGC	1 cut(s)	654
Bpu14I	TTCGAA	1 cut(s)	608
BpuMI	CCSGG	3 cut(s)	212, 213, 272
Bsa29I	ATCGAT	1 cut(s)	1827
BsaAI	YACGTR	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	1698
BsaHI	GRCGYC	2 cut(s)	223, 348
BsaI	GGTCTC	2 cut(s)	389, 770
BsaWI	WCCGGW	1 cut(s)	1454
BsaXI	ACNNNNNCTCC	6 cut(s)	167, 197, 200, 230, 885, 915
Bsc4I	CCNNNNNNNGG	4 cut(s)	408, 811, 975, 1983
Bse118I	RCCGGY	1 cut(s)	619
Bse1I	ACTGG	3 cut(s)	632, 1222, 1627
Bse3DI	GCAATG	2 cut(s)	756, 1832
Bse8I	GATNNNNATC	1 cut(s)	1698
BseBI	CCWGG	6 cut(s)	220, 260, 1246, 1621, 1814, 1980
BseCI	ATCGAT	1 cut(s)	1827
BseGI	GGATG	6 cut(s)	169, 984, 1371, 1474, 1558, 1992
BseJI	GATNNNNATC	1 cut(s)	1698
BseLI	CCNNNNNNNGG	4 cut(s)	408, 811, 975, 1983
BseMI	GCAATG	2 cut(s)	756, 1832
BseMII	CTCAG	6 cut(s)	645, 743, 776, 1362, 1506, 1569
BseNI	ACTGG	3 cut(s)	632, 1222, 1627
BseRI	GAGGAG	5 cut(s)	212, 215, 671, 906, 1916
BseSI	GKGCMC	2 cut(s)	1083, 1312
BseYI	CCCAGC	3 cut(s)	406, 896, 1198
BsgI	GTGCAG	1 cut(s)	1447
Bsh1236I	CGCG	5 cut(s)	381, 395, 397, 801, 1706
BshFI	GGCC	6 cut(s)	76, 253, 263, 429, 458, 1250
BshNI	GGYRCC	1 cut(s)	222
BshVI	ATCGAT	1 cut(s)	1827
BsiHKAI	GWGCWC	2 cut(s)	207, 1492
BsiHKCI	CYCGRG	3 cut(s)	155, 211, 855
BsiSI	CCGG	6 cut(s)	180, 212, 272, 324, 620, 1455
BslFI	GGGAC	3 cut(s)	1296, 1346, 1609
BslI	CCNNNNNNNGG	4 cut(s)	408, 811, 975, 1983
BsmAI	GTCTC	3 cut(s)	389, 770, 1928
BsmFI	GGGAC	3 cut(s)	1296, 1346, 1609
BsmI	GAATGC	2 cut(s)	1187, 1346
BsnI	GGCC	6 cut(s)	76, 253, 263, 429, 458, 1250
Bso31I	GGTCTC	2 cut(s)	389, 770
BsoBI	CYCGRG	3 cut(s)	155, 211, 855
Bsp119I	TTCGAA	1 cut(s)	608
Bsp1286I	GDGCHC	6 cut(s)	207, 218, 240, 1083, 1312, 1492
Bsp1407I	TGTACA	1 cut(s)	1260
Bsp143I	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
Bsp68I	TCGCGA	1 cut(s)	1706
BspACI	CCGC	5 cut(s)	379, 381, 397, 746, 1598
BspANI	GGCC	6 cut(s)	76, 253, 263, 429, 458, 1250
BspCNI	CTCAG	6 cut(s)	646, 742, 777, 1363, 1507, 1570
BspDI	ATCGAT	1 cut(s)	1827
BspFNI	CGCG	5 cut(s)	381, 395, 397, 801, 1706
BspLI	GGNNCC	6 cut(s)	184, 217, 224, 641, 1284, 1625
BspPI	GGATC	3 cut(s)	634, 647, 1701
BspQI	GCTCTTC	1 cut(s)	674
BspT104I	TTCGAA	1 cut(s)	608
BspT107I	GGYRCC	1 cut(s)	222
BspTI	CTTAAG	1 cut(s)	1229
BspTNI	GGTCTC	2 cut(s)	389, 770
BsrDI	GCAATG	2 cut(s)	756, 1832
BsrFI	RCCGGY	1 cut(s)	619
BsrGI	TGTACA	1 cut(s)	1260
BsrI	ACTGG	3 cut(s)	632, 1222, 1627
BssAI	RCCGGY	1 cut(s)	619
BssMI	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
BssNI	GRCGYC	2 cut(s)	223, 348
BssT1I	CCWWGG	7 cut(s)	453, 810, 918, 1090, 1182, 1654, 1851
Bst2UI	CCWGG	6 cut(s)	220, 260, 1246, 1621, 1814, 1980
Bst4CI	ACNGT	6 cut(s)	192, 295, 1255, 1287, 1595, 1933
Bst6I	CTCTTC	2 cut(s)	71, 674
BstACI	GRCGYC	2 cut(s)	223, 348
BstAFI	CTTAAG	1 cut(s)	1229
BstAUI	TGTACA	1 cut(s)	1260
BstBAI	YACGTR	1 cut(s)	465
BstBI	TTCGAA	1 cut(s)	608
BstC8I	GCNNGC	5 cut(s)	1488, 1509, 1617, 1961, 1965
BstDEI	CTNAG	6 cut(s)	654, 729, 785, 1371, 1515, 1578
BstDSI	CCRYGG	2 cut(s)	379, 1286
BstF5I	GGATG	6 cut(s)	169, 984, 1371, 1474, 1558, 1992
BstFNI	CGCG	5 cut(s)	381, 395, 397, 801, 1706
BstH2I	RGCGCY	1 cut(s)	226
BstHHI	GCGC	4 cut(s)	225, 397, 801, 1393
BstKTI	GATC	7 cut(s)	363, 627, 642, 1696, 1723, 1741, 1827
BstMAI	GTCTC	3 cut(s)	389, 770, 1928
BstMBI	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
BstMWI	GCNNNNNNNGC	8 cut(s)	180, 222, 403, 584, 893, 1169, 1604, 1973
BstNI	CCWGG	6 cut(s)	220, 260, 1246, 1621, 1814, 1980
BstNSI	RCATGY	8 cut(s)	499, 1146, 1441, 1535, 1619, 1666, 1967, 2018
BstSCI	CCNGG	9 cut(s)	210, 211, 218, 258, 270, 1244, 1619, 1812, 1978
BstSLI	GKGCMC	2 cut(s)	1083, 1312
BstUI	CGCG	5 cut(s)	381, 395, 397, 801, 1706
BstV2I	GAAGAC	1 cut(s)	1074
BstX2I	RGATCY	2 cut(s)	639, 1693
BstXI	CCANNNNNNTGG	1 cut(s)	925
BstYI	RGATCY	2 cut(s)	639, 1693
Bsu15I	ATCGAT	1 cut(s)	1827
BsuI	GTATCC	1 cut(s)	1779
BsuRI	GGCC	6 cut(s)	76, 253, 263, 429, 458, 1250
BsuTUI	ATCGAT	1 cut(s)	1827
BtgI	CCRYGG	2 cut(s)	379, 1286
BtgZI	GCGATG	1 cut(s)	875
BtsCI	GGATG	6 cut(s)	169, 984, 1371, 1474, 1558, 1992
BtsI	GCAGTG	2 cut(s)	561, 594
BtsIMutI	CAGTG	5 cut(s)	561, 594, 639, 1251, 1929
BtuMI	TCGCGA	1 cut(s)	1706
Cac8I	GCNNGC	5 cut(s)	1488, 1509, 1617, 1961, 1965
CfoI	GCGC	4 cut(s)	225, 397, 801, 1393
Cfr10I	RCCGGY	1 cut(s)	619
Cfr13I	GGNCC	7 cut(s)	252, 399, 427, 1248, 1283, 1623, 1816
Cfr42I	CCGCGG	1 cut(s)	382
Cfr9I	CCCGGG	1 cut(s)	211
ClaI	ATCGAT	1 cut(s)	1827
CpoI	CGGWCCG	1 cut(s)	399
CseI	GACGC	3 cut(s)	343, 356, 1079
Csp6I	GTAC	7 cut(s)	418, 466, 565, 721, 1261, 1321, 1575
CspI	CGGWCCG	1 cut(s)	399
CviQI	GTAC	7 cut(s)	418, 466, 565, 721, 1261, 1321, 1575
DdeI	CTNAG	6 cut(s)	654, 729, 785, 1371, 1515, 1578
DinI	GGCGCC	1 cut(s)	224
DpnI	GATC	7 cut(s)	362, 626, 641, 1695, 1722, 1740, 1826
DpnII	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
EaeI	YGGCCR	2 cut(s)	74, 261
Eam1104I	CTCTTC	2 cut(s)	71, 674
EarI	CTCTTC	2 cut(s)	71, 674
Ecl136II	GAGCTC	1 cut(s)	205
Eco130I	CCWWGG	7 cut(s)	453, 810, 918, 1090, 1182, 1654, 1851
Eco147I	AGGCCT	1 cut(s)	458
Eco24I	GRGCYC	3 cut(s)	207, 218, 240
Eco31I	GGTCTC	2 cut(s)	389, 770
Eco47I	GGWCC	4 cut(s)	399, 1283, 1623, 1816
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	1860
Eco88I	CYCGRG	3 cut(s)	155, 211, 855
EcoICRI	GAGCTC	1 cut(s)	205
EcoO109I	RGGNCCY	1 cut(s)	1623
EcoRII	CCWGG	6 cut(s)	218, 258, 1244, 1619, 1812, 1978
EcoT14I	CCWWGG	7 cut(s)	453, 810, 918, 1090, 1182, 1654, 1851
EcoT22I	ATGCAT	2 cut(s)	1558, 1668
EcoT38I	GRGCYC	3 cut(s)	207, 218, 240
EgeI	GGCGCC	1 cut(s)	224
EheI	GGCGCC	1 cut(s)	224
ErhI	CCWWGG	7 cut(s)	453, 810, 918, 1090, 1182, 1654, 1851
FalI	AAGNNNNNCTT	2 cut(s)	1334, 1366
FaqI	GGGAC	3 cut(s)	1296, 1346, 1609
FauI	CCCGC	1 cut(s)	386
FbaI	TGATCA	2 cut(s)	1720, 1738
FokI	GGATG	6 cut(s)	176, 991, 1378, 1481, 1565, 1999
FriOI	GRGCYC	3 cut(s)	207, 218, 240
FspBI	CTAG	7 cut(s)	531, 888, 1091, 1268, 1313, 1730, 1883
GlaI	GCGC	4 cut(s)	224, 396, 800, 1392
GsaI	CCCAGC	3 cut(s)	410, 900, 1202
GsuI	CTGGAG	2 cut(s)	947, 1239
HaeII	RGCGCY	1 cut(s)	226
HaeIII	GGCC	6 cut(s)	76, 253, 263, 429, 458, 1250
HapII	CCGG	6 cut(s)	180, 212, 272, 324, 620, 1455
HgaI	GACGC	3 cut(s)	343, 356, 1079
HhaI	GCGC	4 cut(s)	225, 397, 801, 1393
Hin1I	GRCGYC	2 cut(s)	223, 348
Hin6I	GCGC	4 cut(s)	223, 395, 799, 1391
HinP1I	GCGC	4 cut(s)	223, 395, 799, 1391
HincII	GTYRAC	1 cut(s)	1178
HindII	GTYRAC	1 cut(s)	1178
HindIII	AAGCTT	1 cut(s)	1777
HpaII	CCGG	6 cut(s)	180, 212, 272, 324, 620, 1455
HphI	GGTGA	2 cut(s)	634, 1018
Hpy166II	GTNNAC	1 cut(s)	1178
Hpy188I	TCNGA	7 cut(s)	196, 358, 484, 571, 711, 732, 1516
Hpy188III	TCNNGA	8 cut(s)	37, 926, 1302, 1415, 1705, 1730, 1883, 1946
Hpy8I	GTNNAC	1 cut(s)	1178
Hpy99I	CGWCG	3 cut(s)	134, 337, 350
HpyAV	CCTTC	7 cut(s)	469, 604, 727, 826, 838, 1045, 1883
HpyCH4III	ACNGT	6 cut(s)	192, 295, 1255, 1287, 1595, 1933
HpyCH4IV	ACGT	2 cut(s)	464, 1432
HpyF10VI	GCNNNNNNNGC	8 cut(s)	180, 222, 403, 584, 893, 1169, 1604, 1973
HpyF3I	CTNAG	6 cut(s)	654, 729, 785, 1371, 1515, 1578
HpySE526I	ACGT	2 cut(s)	464, 1432
Hsp92I	GRCGYC	2 cut(s)	223, 348
HspAI	GCGC	4 cut(s)	223, 395, 799, 1391
KasI	GGCGCC	1 cut(s)	222
Ksp22I	TGATCA	2 cut(s)	1720, 1738
KspI	CCGCGG	1 cut(s)	382
Kzo9I	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
LguI	GCTCTTC	1 cut(s)	674
LmnI	GCTCC	8 cut(s)	188, 202, 221, 326, 650, 865, 893, 955
LweI	GCATC	4 cut(s)	1459, 1489, 1520, 1543
MaeI	CTAG	7 cut(s)	531, 888, 1091, 1268, 1313, 1730, 1883
MaeII	ACGT	2 cut(s)	464, 1432
MaeIII	GTNAC	7 cut(s)	295, 491, 1120, 1397, 1658, 1712, 1759
MalI	GATC	7 cut(s)	362, 626, 641, 1695, 1722, 1740, 1826
MboI	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
MflI	RGATCY	2 cut(s)	639, 1693
MhlI	GDGCHC	6 cut(s)	207, 218, 240, 1083, 1312, 1492
MlsI	TGGCCA	1 cut(s)	263
MluCI	AATT	7 cut(s)	4, 302, 572, 603, 910, 1751, 1795
MluNI	TGGCCA	1 cut(s)	263
Mly113I	GGCGCC	1 cut(s)	223
MlyI	GAGTC	6 cut(s)	128, 133, 143, 170, 608, 1903
MmeI	TCCRAC	1 cut(s)	819
Mox20I	TGGCCA	1 cut(s)	263
Mph1103I	ATGCAT	2 cut(s)	1558, 1668
MroXI	GAANNNNTTC	1 cut(s)	596
MscI	TGGCCA	1 cut(s)	263
MseI	TTAA	5 cut(s)	110, 305, 996, 1230, 1325
MslI	CAYNNNNRTG	4 cut(s)	1485, 1501, 1671, 2007
Msp20I	TGGCCA	1 cut(s)	263
MspA1I	CMGCKG	2 cut(s)	381, 1198
MspCI	CTTAAG	1 cut(s)	1229
MspI	CCGG	6 cut(s)	180, 212, 272, 324, 620, 1455
MspR9I	CCNGG	9 cut(s)	212, 213, 220, 260, 272, 1246, 1621, 1814, 1980
Mva1269I	GAATGC	2 cut(s)	1187, 1346
MvaI	CCWGG	6 cut(s)	220, 260, 1246, 1621, 1814, 1980
MvnI	CGCG	5 cut(s)	381, 395, 397, 801, 1706
MwoI	GCNNNNNNNGC	8 cut(s)	180, 222, 403, 584, 893, 1169, 1604, 1973
NarI	GGCGCC	1 cut(s)	223
NciI	CCSGG	3 cut(s)	212, 213, 272
NdeII	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
NlaIV	GGNNCC	6 cut(s)	184, 217, 224, 641, 1284, 1625
NmeAIII	GCCGAG	2 cut(s)	52, 604
NmuCI	GTSAC	1 cut(s)	1759
NruI	TCGCGA	1 cut(s)	1706
NsiI	ATGCAT	2 cut(s)	1558, 1668
NspI	RCATGY	8 cut(s)	499, 1146, 1441, 1535, 1619, 1666, 1967, 2018
NspV	TTCGAA	1 cut(s)	608
PaeI	GCATGC	2 cut(s)	1619, 1967
PasI	CCCWGGG	1 cut(s)	1245
PceI	AGGCCT	1 cut(s)	458
PciSI	GCTCTTC	1 cut(s)	674
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PctI	GAATGC	2 cut(s)	1187, 1346
PdmI	GAANNNNTTC	1 cut(s)	596
PfeI	GAWTC	5 cut(s)	368, 1316, 1411, 1451, 1829
PleI	GAGTC	6 cut(s)	128, 133, 143, 170, 608, 1903
PluTI	GGCGCC	1 cut(s)	226
PpsI	GAGTC	6 cut(s)	128, 133, 143, 170, 608, 1903
Ppu21I	YACGTR	1 cut(s)	465
PpuMI	RGGWCCY	1 cut(s)	1623
PshBI	ATTAAT	1 cut(s)	305
Psp124BI	GAGCTC	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	1623
Psp6I	CCWGG	6 cut(s)	218, 258, 1244, 1619, 1812, 1978
PspFI	CCCAGC	3 cut(s)	406, 896, 1198
PspGI	CCWGG	6 cut(s)	218, 258, 1244, 1619, 1812, 1978
PspN4I	GGNNCC	6 cut(s)	184, 217, 224, 641, 1284, 1625
PspPI	GGNCC	7 cut(s)	252, 399, 427, 1248, 1283, 1623, 1816
PspPPI	RGGWCCY	1 cut(s)	1623
PsuI	RGATCY	2 cut(s)	639, 1693
PvuII	CAGCTG	1 cut(s)	1198
RruI	TCGCGA	1 cut(s)	1706
RsaI	GTAC	7 cut(s)	419, 467, 566, 722, 1262, 1322, 1576
RsaNI	GTAC	7 cut(s)	418, 466, 565, 721, 1261, 1321, 1575
RseI	CAYNNNNRTG	4 cut(s)	1485, 1501, 1671, 2007
Rsr2I	CGGWCCG	1 cut(s)	399
RsrII	CGGWCCG	1 cut(s)	399
SacI	GAGCTC	1 cut(s)	207
SacII	CCGCGG	1 cut(s)	382
SapI	GCTCTTC	1 cut(s)	674
SaqAI	TTAA	5 cut(s)	110, 305, 996, 1230, 1325
Sau3AI	GATC	7 cut(s)	360, 624, 639, 1693, 1720, 1738, 1824
Sau96I	GGNCC	7 cut(s)	252, 399, 427, 1248, 1283, 1623, 1816
SchI	GAGTC	6 cut(s)	128, 133, 143, 170, 608, 1903
ScrFI	CCNGG	9 cut(s)	212, 213, 220, 260, 272, 1246, 1621, 1814, 1980
SduI	GDGCHC	6 cut(s)	207, 218, 240, 1083, 1312, 1492
SfaNI	GCATC	4 cut(s)	1459, 1489, 1520, 1543
SfoI	GGCGCC	1 cut(s)	224
Sfr303I	CCGCGG	1 cut(s)	382
SfuI	TTCGAA	1 cut(s)	608
SgrAI	CRCCGGYG	1 cut(s)	619
SgrBI	CCGCGG	1 cut(s)	382
SinI	GGWCC	4 cut(s)	399, 1283, 1623, 1816
SmaI	CCCGGG	1 cut(s)	213
SmiMI	CAYNNNNRTG	4 cut(s)	1485, 1501, 1671, 2007
SmlI	CTYRAG	1 cut(s)	1229
SmoI	CTYRAG	1 cut(s)	1229
SpeI	ACTAGT	1 cut(s)	1267
SphI	GCATGC	2 cut(s)	1619, 1967
Sse9I	AATT	7 cut(s)	4, 302, 572, 603, 910, 1751, 1795
SseBI	AGGCCT	1 cut(s)	458
SsiI	CCGC	5 cut(s)	379, 381, 397, 746, 1598
SspDI	GGCGCC	1 cut(s)	222
SspI	AATATT	1 cut(s)	1905
SspMI	CTAG	7 cut(s)	531, 888, 1091, 1268, 1313, 1730, 1883
SstI	GAGCTC	1 cut(s)	207
StuI	AGGCCT	1 cut(s)	458
StyD4I	CCNGG	9 cut(s)	210, 211, 218, 258, 270, 1244, 1619, 1812, 1978
StyI	CCWWGG	7 cut(s)	453, 810, 918, 1090, 1182, 1654, 1851
TaaI	ACNGT	6 cut(s)	192, 295, 1255, 1287, 1595, 1933
TaiI	ACGT	2 cut(s)	467, 1435
TaqI	TCGA	9 cut(s)	16, 137, 207, 234, 363, 503, 608, 627, 1827
TasI	AATT	7 cut(s)	4, 302, 572, 603, 910, 1751, 1795
TatI	WGTACW	2 cut(s)	564, 1260
TauI	GCSGC	2 cut(s)	749, 1601
TfiI	GAWTC	5 cut(s)	368, 1316, 1411, 1451, 1829
Tru1I	TTAA	5 cut(s)	110, 305, 996, 1230, 1325
Tru9I	TTAA	5 cut(s)	110, 305, 996, 1230, 1325
TscAI	CASTG	5 cut(s)	561, 594, 639, 1258, 1936
TseFI	GTSAC	1 cut(s)	1759
Tsp45I	GTSAC	1 cut(s)	1759
TspDTI	ATGAA	7 cut(s)	17, 1080, 1202, 1485, 1542, 1688, 1821
TspGWI	ACGGA	3 cut(s)	304, 391, 1481
TspMI	CCCGGG	1 cut(s)	211
TspRI	CASTG	5 cut(s)	561, 594, 639, 1258, 1936
Vha464I	CTTAAG	1 cut(s)	1229
VpaK11BI	GGWCC	4 cut(s)	399, 1283, 1623, 1816
VspI	ATTAAT	1 cut(s)	305
XapI	RAATTY	1 cut(s)	4
XbaI	TCTAGA	2 cut(s)	1729, 1882
XceI	RCATGY	8 cut(s)	499, 1146, 1441, 1535, 1619, 1666, 1967, 2018
XmaI	CCCGGG	1 cut(s)	211
XmaJI	CCTAGG	1 cut(s)	1090
XmnI	GAANNNNTTC	1 cut(s)	596
XspI	CTAG	7 cut(s)	531, 888, 1091, 1268, 1313, 1730, 1883
Zsp2I	ATGCAT	2 cut(s)	1558, 1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.