Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0011902

Physical Location & Seq

Genomic Coordinates Reverse (-)

31666987 .. 31670227

Gene Structure 3241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1236800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGAATTTTGCAGCTCGAAAGCTCCTCTTCTCTCTCCTGATTTTCTCTCTCTTCCCCCTCTCTCTCTGCGCCCGTCCCTTCATCCTCGTTCTCTCGCAAGACGATCTCCTAAACACCCCCACCTCGCCCGACGACTCGCCGTCCGCCGCCGACTCAGCTCCAAATGAGTCGCCGGACTGGGACGAGTTTGGCGACTCCGACGCCGTGCAGTCAGAGGAGGAGCTCGACCCGGGATCCTGGCGCCCAATCTTCGAACCAGACCCCTTTAAGGCCGACCCGGCTACCCACCCCGACGACGGATACTACTCCACCGTATCCAAATTAATAAAGTCCGTTAGCTCCGGCGACACCGCGCTCATGGACGCTGCCGTTTCCGAGATCGAGGACTCGGCTTCCCGCGGCCTCCCTCACGCGCGGTCCGTTCTGGGGTTTCTGTACGGTACGGGCCAGATGAGGAAGCAGAACAAGGCCAAGGCTTTCGCGTACCATTACTTCGCCGCCGAGGGCGGCAACATGCAGTCGAAGATGGCCCTCGCGTATACTTACTTCAGGCAAGATATGTTTGATAAAGCGGTGAAATTGTACTCGGAATTGGCCGAGGCAGCTGTGAATAGCTTCCTGATTTCGAGGGACTCGCCGGTGAACGAGGCTGTGAGGATCCACAGCGGAGCGGAGGAGAACAAGGAGGCATTGAGGAAGAGCCGCGGCGAAGAAGACGAGGACTTTCAAATTTTGGAGTACCAAGCTCAGAAGGGAAACTCCGCGGCAATGTATAAGCTGGGCCTGTTTTACTATTTCGGGCTGAGAGGGTTGCGCCGCGACCACGCCAAGGCGTTGTCGTGGTTTCTGAAGGCGTTGGAGAAGGGAGAGCCTCGGGCGATGGAGCTCCTCGGAGAGATTTATGCTAGGGGAGCTGGTGTTGAGAGGAATTACACCAAGGCTCTGGAGTGGCTTACACTTGCAGCCAAACAGGATCATTATTCGGCATATAACGGGATTGGGTATTTGTATGTTAAAGGTTATGGGGTGGAGAAGAAGAACTACACTAAAGCAAAGGAGTATTTTGAGAAAGCTGCTGATAATCAAGACGGTGGCGGGCACTATAACCTGGGAGTAATGTATCTCAAAGGAATTGGGGTAAAGAGAGATGTTAAACTTGCATGTCAATACTTCATCTTTGCTGCGAATGCTGGTCAACCCAAGGCATTCTACCAGCTAGGGAAGATGTTTCATACAGGAGTCGGGCTTAAGAAGAATCTTCCACGGGCCACTGCATTATACAAATTAGTTGCAGAAAGGGGACCGTGGAGCTCCTTGTCTCGATGGGCACTTGAATCATACTTAAGAGGGGACGTGGGCAAGGCATTTTTCTTGTATTCAAGGATGGCCGAGTTAGGCTATGAGGTAGCGCAGAGTAACGCTGCATGGATTCTTGACAAATATGGAGAGCGAAGCATGTGCATGGGAGAATCCGGTTTGTGCACTAATGCAGAAAGGCATCAGCGAGCACATTCATTATGGTGGCAAGCATCTGAGCAGGGTAATGAACACGCTGCTTTGCTGATTGGGGATGCGTATTACTATGGTCAGGGTACTGAGAGGGATTATGAACGAGCGGCAGAGGCTTACAAGCATGCAAGGTCCCAGTCTAACGCCCAAGCCATGTTCAACCTTGGTTACATGCATGAGCACGGACATGGGCTGCCTTTGGATCTTCATCTTGCAAAGCGTTACTATGATCAAGCCCTAGAGATTGATTCAGCAGCAAAGTTGCCTGTCACGCTAGCCCTCACAAGCTTATGGATACGAAAAAATTATGCCGATGGTTTCCTGGTACATATAATCGATTCATTGCCCGAAGCCTATCCCAAGGTTGAAGAATGGGTAGATACCGTGCTACTTGATGAGGGAAACGCGACGATATTGACTCTTTTTGTTTGCCTCCTTACCGTCTTGTATCTACGCGAGCGACAACGCAGGCATGCTGTTGCTGCCCCTGATGCGATGGCTGCACTGCACCACCCGAATGAGCATGTTGCACCACCCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000835 GO:0000836 GO:0000839 GO:0002790 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006508 GO:0006511 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0006972 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009306 GO:0009628 GO:0009651 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0031984 GO:0032940 GO:0032991 GO:0033036 GO:0033554 GO:0034976 GO:0036503 GO:0042175 GO:0042221 GO:0042538 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046486 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051716 GO:0071702 GO:0071704 GO:0071705 GO:0098796 GO:0098827 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sel1 TPR_3

Protein Analysis

684

Amino Acids

76.52

Weight (kDa)

5.99

Isoelectric Point (pI)

44.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sel1	PF08238	254 - 289	4.5e-08	Sel1 repeat
Sel1	PF08238	291 - 326	1.1e-08	Sel1 repeat
Sel1	PF08238	329 - 362	1.8e-06	Sel1 repeat
Sel1	PF08238	367 - 398	1.3e-06	Sel1 repeat
Sel1	PF08238	552 - 583	7.7e-07	Sel1 repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18260 AT1G73570
fragaria_vesca	FvH4_5g17420
malus_domestica	MD06G1227600.v1.1 MD14G1236800.v1.1
prunus_persica	Prupe.5G234000_v2.0.a1 Prupe.5G234000_v2.0.a1
pyrus_communis	pycom14g19780
rosa_chinensis	RchiOBHm_Chr7g0178271
rosa_laevigata	RLG00000005457
rosa_multiflora	Rmu_sc0020850.1_g000001 Rmu_ssc0000283.1_g000001
rosa_roxburghii	Rroxscaffold_3G00275020
rosa_rugosa	Rorug06G0415900
rosa_samantha	Rh7AG014700 Rh7BG014200 Rh7CG014200 Rh7DG014500
rosa_wichuraiana	Rw7G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	240
AccBSI	CCGCTC	2 cut(s)	671, 1616
AccI	GTMKAC	1 cut(s)	539
AclWI	GGATC	6 cut(s)	228, 241, 652, 665, 981, 1719
AcoI	YGGCCR	2 cut(s)	594, 1386
AcsI	RAATTY	2 cut(s)	4, 729
AcuI	CTGAAG	2 cut(s)	532, 869
AcyI	GRCGYC	2 cut(s)	201, 241
AfaI	GTAC	7 cut(s)	437, 442, 485, 584, 740, 1594, 1836
AfiI	CCNNNNNNNGG	4 cut(s)	268, 296, 426, 829
AflII	CTTAAG	2 cut(s)	1247, 1342
AgsI	TTSAA	5 cut(s)	728, 1334, 1380, 1669, 1877
AhdI	GACNNNNNGTC	1 cut(s)	139
AjiI	CACGTC	1 cut(s)	1354
AjnI	CCWGG	3 cut(s)	236, 1107, 1830
Alw21I	GWGCWC	6 cut(s)	225, 888, 1313, 1484, 1510, 1692
Alw26I	GTCTC	1 cut(s)	1323
Alw44I	GTGCAC	1 cut(s)	1480
AlwI	GGATC	6 cut(s)	228, 241, 652, 665, 981, 1719
Ama87I	CYCGRG	2 cut(s)	229, 873
AoxI	GGCC	9 cut(s)	270, 400, 445, 468, 528, 594, 781, 1266, 1386
ApaLI	GTGCAC	1 cut(s)	1480
ApoI	RAATTY	2 cut(s)	4, 729
AseI	ATTAAT	1 cut(s)	323
Asp700I	GAANNNNTTC	1 cut(s)	614
AspLEI	GCGC	6 cut(s)	71, 243, 355, 415, 816, 1411
AspS9I	GGNCC	7 cut(s)	417, 445, 529, 781, 1266, 1301, 1641
AsuC2I	CCSGG	3 cut(s)	230, 231, 278
AsuHPI	GGTGA	2 cut(s)	586, 652
AsuII	TTCGAA	1 cut(s)	252
AsuNHI	GCTAGC	1 cut(s)	1783
AvaI	CYCGRG	2 cut(s)	229, 873
AvaII	GGWCC	3 cut(s)	417, 1301, 1641
BaeGI	GKGCMC	3 cut(s)	1101, 1330, 1484
BamHI	GGATCC	2 cut(s)	233, 657
BanI	GGYRCC	1 cut(s)	240
BanII	GRGCYC	3 cut(s)	225, 888, 1313
BarI	GAAGNNNNNNTAC	6 cut(s)	476, 508, 530, 562, 1025, 1057
BbsI	GAAGAC	1 cut(s)	720
Bbv12I	GWGCWC	6 cut(s)	225, 888, 1313, 1484, 1510, 1692
BccI	CCATC	6 cut(s)	520, 874, 1317, 1378, 1817, 1999
BceAI	ACGGC	3 cut(s)	124, 188, 353
BcgI	CGANNNNNNTGC	2 cut(s)	1440, 1474
BciT130I	CCWGG	3 cut(s)	238, 1109, 1832
BciVI	GTATCC	3 cut(s)	293, 325, 1797
BclI	TGATCA	1 cut(s)	1738
BcnI	CCSGG	3 cut(s)	230, 231, 278
BcoDI	GTCTC	1 cut(s)	1323
BfaI	CTAG	4 cut(s)	906, 1217, 1748, 1784
BfoI	RGCGCY	1 cut(s)	244
BfrI	CTTAAG	2 cut(s)	1247, 1342
BfuI	GTATCC	3 cut(s)	293, 325, 1797
BglI	GCCNNNNNGGC	1 cut(s)	278
Bme1390I	CCNGG	6 cut(s)	230, 231, 238, 278, 1109, 1832
Bme18I	GGWCC	3 cut(s)	417, 1301, 1641
BmeRI	GACNNNNNGTC	1 cut(s)	139
BmeT110I	CYCGRG	2 cut(s)	229, 873
BmgBI	CACGTC	1 cut(s)	1354
BmgT120I	GGNCC	7 cut(s)	417, 445, 529, 781, 1266, 1301, 1641
BmiI	GGNNCC	5 cut(s)	235, 242, 659, 1302, 1643
BmrFI	CCNGG	6 cut(s)	230, 231, 238, 278, 1109, 1832
BmrI	ACTGGG	2 cut(s)	187, 1639
BmsI	GCATC	4 cut(s)	1507, 1538, 1561, 1990
BmtI	GCTAGC	1 cut(s)	1787
BmuI	ACTGGG	2 cut(s)	187, 1639
BpiI	GAAGAC	1 cut(s)	720
BpmI	CTGGAG	1 cut(s)	965
Bpu14I	TTCGAA	1 cut(s)	252
BpuMI	CCSGG	3 cut(s)	230, 231, 278
Bsa29I	ATCGAT	1 cut(s)	1845
BsaBI	GATNNNNATC	1 cut(s)	1716
BsaHI	GRCGYC	2 cut(s)	201, 241
BsaWI	WCCGGW	1 cut(s)	1472
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 296, 426, 829
Bse118I	RCCGGY	1 cut(s)	637
Bse1I	ACTGG	2 cut(s)	182, 1645
Bse3DI	GCAATG	2 cut(s)	774, 1850
Bse8I	GATNNNNATC	1 cut(s)	1716
BseBI	CCWGG	3 cut(s)	238, 1109, 1832
BseCI	ATCGAT	1 cut(s)	1845
BseGI	GGATG	3 cut(s)	81, 1389, 1576
BseJI	GATNNNNATC	1 cut(s)	1716
BseLI	CCNNNNNNNGG	4 cut(s)	268, 296, 426, 829
BseMI	GCAATG	2 cut(s)	774, 1850
BseMII	CTCAG	5 cut(s)	168, 761, 794, 1524, 1587
BseNI	ACTGG	2 cut(s)	182, 1645
BseRI	GAGGAG	5 cut(s)	14, 230, 233, 689, 878
BseSI	GKGCMC	3 cut(s)	1101, 1330, 1484
BseYI	CCCAGC	1 cut(s)	778
BsgI	GTGCAG	3 cut(s)	227, 1995, 2000
BshFI	GGCC	9 cut(s)	272, 402, 447, 470, 530, 596, 783, 1268, 1388
BshNI	GGYRCC	1 cut(s)	240
BshVI	ATCGAT	1 cut(s)	1845
BsiHKAI	GWGCWC	6 cut(s)	225, 888, 1313, 1484, 1510, 1692
BsiHKCI	CYCGRG	2 cut(s)	229, 873
BsiSI	CCGG	6 cut(s)	173, 230, 278, 342, 638, 1473
BslFI	GGGAC	6 cut(s)	60, 194, 644, 1314, 1364, 1627
BslI	CCNNNNNNNGG	4 cut(s)	268, 296, 426, 829
BsmAI	GTCTC	1 cut(s)	1323
BsmFI	GGGAC	6 cut(s)	60, 194, 644, 1314, 1364, 1627
BsmI	GAATGC	2 cut(s)	1192, 1205
BsnI	GGCC	9 cut(s)	272, 402, 447, 470, 530, 596, 783, 1268, 1388
BsoBI	CYCGRG	2 cut(s)	229, 873
Bsp119I	TTCGAA	1 cut(s)	252
Bsp1286I	GDGCHC	8 cut(s)	225, 888, 1101, 1313, 1330, 1484, 1510, 1692
Bsp143I	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
BspANI	GGCC	9 cut(s)	272, 402, 447, 470, 530, 596, 783, 1268, 1388
BspCNI	CTCAG	5 cut(s)	167, 760, 795, 1525, 1588
BspDI	ATCGAT	1 cut(s)	1845
BspLI	GGNNCC	5 cut(s)	235, 242, 659, 1302, 1643
BspOI	GCTAGC	1 cut(s)	1787
BspPI	GGATC	6 cut(s)	228, 241, 652, 665, 981, 1719
BspQI	GCTCTTC	1 cut(s)	692
BspT104I	TTCGAA	1 cut(s)	252
BspT107I	GGYRCC	1 cut(s)	240
BspTI	CTTAAG	2 cut(s)	1247, 1342
BsrBI	CCGCTC	2 cut(s)	671, 1616
BsrDI	GCAATG	2 cut(s)	774, 1850
BsrFI	RCCGGY	1 cut(s)	637
BsrI	ACTGG	2 cut(s)	182, 1645
BssAI	RCCGGY	1 cut(s)	637
BssMI	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
BssNAI	GTATAC	1 cut(s)	540
BssNI	GRCGYC	2 cut(s)	201, 241
BssT1I	CCWWGG	6 cut(s)	471, 828, 936, 1200, 1672, 1869
Bst1107I	GTATAC	1 cut(s)	540
Bst2UI	CCWGG	3 cut(s)	238, 1109, 1832
Bst4CI	ACNGT	6 cut(s)	313, 440, 1091, 1305, 1894, 1951
Bst6I	CTCTTC	3 cut(s)	32, 56, 692
BstACI	GRCGYC	2 cut(s)	201, 241
BstAFI	CTTAAG	2 cut(s)	1247, 1342
BstBI	TTCGAA	1 cut(s)	252
BstC8I	GCNNGC	8 cut(s)	1097, 1506, 1527, 1635, 1785, 1967, 1979, 1983
BstDEI	CTNAG	5 cut(s)	154, 747, 803, 1533, 1596
BstDSI	CCRYGG	5 cut(s)	397, 703, 762, 1262, 1304
BstF5I	GGATG	3 cut(s)	81, 1389, 1576
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	6 cut(s)	71, 243, 355, 415, 816, 1411
BstKTI	GATC	7 cut(s)	106, 236, 381, 660, 976, 1714, 1741
BstMAI	GTCTC	1 cut(s)	1323
BstMBI	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
BstNI	CCWGG	3 cut(s)	238, 1109, 1832
BstNSI	RCATGY	7 cut(s)	517, 1164, 1459, 1637, 1684, 1985, 2036
BstSCI	CCNGG	6 cut(s)	228, 229, 236, 276, 1107, 1830
BstSLI	GKGCMC	3 cut(s)	1101, 1330, 1484
BstV2I	GAAGAC	1 cut(s)	720
BstX2I	RGATCY	3 cut(s)	233, 657, 1711
BstXI	CCANNNNNNTGG	1 cut(s)	943
BstYI	RGATCY	3 cut(s)	233, 657, 1711
BstZ17I	GTATAC	1 cut(s)	540
Bsu15I	ATCGAT	1 cut(s)	1845
BsuI	GTATCC	3 cut(s)	293, 325, 1797
BsuRI	GGCC	9 cut(s)	272, 402, 447, 470, 530, 596, 783, 1268, 1388
BsuTUI	ATCGAT	1 cut(s)	1845
BtgI	CCRYGG	5 cut(s)	397, 703, 762, 1262, 1304
BtgZI	GCGATG	2 cut(s)	893, 2018
BtrI	CACGTC	1 cut(s)	1354
BtsCI	GGATG	3 cut(s)	81, 1389, 1576
BtsI	GCAGTG	2 cut(s)	1269, 2012
BtsIMutI	CAGTG	2 cut(s)	1269, 2012
Cac8I	GCNNGC	8 cut(s)	1097, 1506, 1527, 1635, 1785, 1967, 1979, 1983
CfoI	GCGC	6 cut(s)	71, 243, 355, 415, 816, 1411
Cfr10I	RCCGGY	1 cut(s)	637
Cfr13I	GGNCC	7 cut(s)	417, 445, 529, 781, 1266, 1301, 1641
Cfr42I	CCGCGG	3 cut(s)	400, 706, 765
Cfr9I	CCCGGG	1 cut(s)	229
ClaI	ATCGAT	1 cut(s)	1845
CpoI	CGGWCCG	1 cut(s)	417
CseI	GACGC	2 cut(s)	209, 371
Csp6I	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1593, 1835
CspI	CGGWCCG	1 cut(s)	417
CviQI	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1593, 1835
DdeI	CTNAG	5 cut(s)	154, 747, 803, 1533, 1596
DinI	GGCGCC	1 cut(s)	242
DpnI	GATC	7 cut(s)	105, 235, 380, 659, 975, 1713, 1740
DpnII	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
DriI	GACNNNNNGTC	1 cut(s)	139
EaeI	YGGCCR	2 cut(s)	594, 1386
Eam1104I	CTCTTC	3 cut(s)	32, 56, 692
Eam1105I	GACNNNNNGTC	1 cut(s)	139
EarI	CTCTTC	3 cut(s)	32, 56, 692
EciI	GGCGGA	1 cut(s)	133
Ecl136II	GAGCTC	3 cut(s)	223, 886, 1311
Eco130I	CCWWGG	6 cut(s)	471, 828, 936, 1200, 1672, 1869
Eco24I	GRGCYC	3 cut(s)	225, 888, 1313
Eco47I	GGWCC	3 cut(s)	417, 1301, 1641
Eco53kI	GAGCTC	3 cut(s)	223, 886, 1311
Eco57I	CTGAAG	2 cut(s)	532, 869
Eco88I	CYCGRG	2 cut(s)	229, 873
EcoICRI	GAGCTC	3 cut(s)	223, 886, 1311
EcoO109I	RGGNCCY	1 cut(s)	1641
EcoRII	CCWGG	3 cut(s)	236, 1107, 1830
EcoT14I	CCWWGG	6 cut(s)	471, 828, 936, 1200, 1672, 1869
EcoT22I	ATGCAT	1 cut(s)	1686
EcoT38I	GRGCYC	3 cut(s)	225, 888, 1313
EgeI	GGCGCC	1 cut(s)	242
EheI	GGCGCC	1 cut(s)	242
ErhI	CCWWGG	6 cut(s)	471, 828, 936, 1200, 1672, 1869
FalI	AAGNNNNNCTT	2 cut(s)	11, 43
FaqI	GGGAC	6 cut(s)	60, 194, 644, 1314, 1364, 1627
FauI	CCCGC	2 cut(s)	404, 1088
FbaI	TGATCA	1 cut(s)	1738
FblI	GTMKAC	1 cut(s)	539
FokI	GGATG	3 cut(s)	68, 1396, 1583
FriOI	GRGCYC	3 cut(s)	225, 888, 1313
FspBI	CTAG	4 cut(s)	906, 1217, 1748, 1784
GlaI	GCGC	6 cut(s)	70, 242, 354, 414, 815, 1410
GsaI	CCCAGC	1 cut(s)	782
GsuI	CTGGAG	1 cut(s)	965
HaeII	RGCGCY	1 cut(s)	244
HaeIII	GGCC	9 cut(s)	272, 402, 447, 470, 530, 596, 783, 1268, 1388
HapII	CCGG	6 cut(s)	173, 230, 278, 342, 638, 1473
HgaI	GACGC	2 cut(s)	209, 371
HhaI	GCGC	6 cut(s)	71, 243, 355, 415, 816, 1411
Hin1I	GRCGYC	2 cut(s)	201, 241
Hin6I	GCGC	6 cut(s)	69, 241, 353, 413, 814, 1409
HinP1I	GCGC	6 cut(s)	69, 241, 353, 413, 814, 1409
HincII	GTYRAC	1 cut(s)	1196
HindII	GTYRAC	1 cut(s)	1196
HindIII	AAGCTT	1 cut(s)	1795
HpaII	CCGG	6 cut(s)	173, 230, 278, 342, 638, 1473
HphI	GGTGA	2 cut(s)	586, 652
Hpy166II	GTNNAC	4 cut(s)	540, 643, 1196, 1482
Hpy188I	TCNGA	8 cut(s)	199, 214, 376, 589, 750, 849, 893, 1534
Hpy188III	TCNNGA	6 cut(s)	37, 619, 944, 1085, 1320, 1433
Hpy8I	GTNNAC	4 cut(s)	540, 643, 1196, 1482
Hpy99I	CGWCG	5 cut(s)	134, 203, 296, 299, 1921
HpyAV	CCTTC	4 cut(s)	88, 745, 844, 856
HpyCH4III	ACNGT	6 cut(s)	313, 440, 1091, 1305, 1894, 1951
HpyCH4IV	ACGT	1 cut(s)	1353
HpyF3I	CTNAG	5 cut(s)	154, 747, 803, 1533, 1596
HpySE526I	ACGT	1 cut(s)	1353
Hsp92I	GRCGYC	2 cut(s)	201, 241
HspAI	GCGC	6 cut(s)	69, 241, 353, 413, 814, 1409
KasI	GGCGCC	1 cut(s)	240
Ksp22I	TGATCA	1 cut(s)	1738
KspI	CCGCGG	3 cut(s)	400, 706, 765
Kzo9I	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
LguI	GCTCTTC	1 cut(s)	692
LweI	GCATC	4 cut(s)	1507, 1538, 1561, 1990
MaeI	CTAG	4 cut(s)	906, 1217, 1748, 1784
MaeII	ACGT	1 cut(s)	1353
MaeIII	GTNAC	4 cut(s)	1415, 1676, 1730, 1777
MalI	GATC	7 cut(s)	105, 235, 380, 659, 975, 1713, 1740
MbiI	CCGCTC	2 cut(s)	671, 1616
MboI	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
MflI	RGATCY	3 cut(s)	233, 657, 1711
MhlI	GDGCHC	8 cut(s)	225, 888, 1101, 1313, 1330, 1484, 1510, 1692
MluCI	AATT	9 cut(s)	4, 320, 578, 590, 729, 928, 1131, 1283, 1813
Mly113I	GGCGCC	1 cut(s)	241
MlyI	GAGTC	8 cut(s)	128, 146, 176, 188, 380, 626, 1248, 1921
MmeI	TCCRAC	2 cut(s)	222, 837
Mph1103I	ATGCAT	1 cut(s)	1686
MroXI	GAANNNNTTC	1 cut(s)	614
MseI	TTAA	6 cut(s)	267, 323, 1014, 1152, 1248, 1343
MslI	CAYNNNNRTG	4 cut(s)	1460, 1519, 1695, 2025
MspA1I	CMGCKG	5 cut(s)	399, 605, 666, 705, 764
MspCI	CTTAAG	2 cut(s)	1247, 1342
MspI	CCGG	6 cut(s)	173, 230, 278, 342, 638, 1473
MspR9I	CCNGG	6 cut(s)	230, 231, 238, 278, 1109, 1832
Mva1269I	GAATGC	2 cut(s)	1192, 1205
MvaI	CCWGG	3 cut(s)	238, 1109, 1832
NarI	GGCGCC	1 cut(s)	241
NciI	CCSGG	3 cut(s)	230, 231, 278
NdeII	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
NheI	GCTAGC	1 cut(s)	1783
NlaIV	GGNNCC	5 cut(s)	235, 242, 659, 1302, 1643
NmeAIII	GCCGAG	4 cut(s)	368, 526, 622, 1414
NmuCI	GTSAC	1 cut(s)	1777
NsiI	ATGCAT	1 cut(s)	1686
NspI	RCATGY	7 cut(s)	517, 1164, 1459, 1637, 1684, 1985, 2036
NspV	TTCGAA	1 cut(s)	252
PaeI	GCATGC	2 cut(s)	1637, 1985
PciSI	GCTCTTC	1 cut(s)	692
PcsI	WCGNNNNNNNCGW	2 cut(s)	189, 417
PctI	GAATGC	2 cut(s)	1192, 1205
PdmI	GAANNNNTTC	1 cut(s)	614
PfeI	GAWTC	6 cut(s)	1255, 1334, 1429, 1469, 1757, 1847
PleI	GAGTC	8 cut(s)	128, 146, 175, 188, 380, 626, 1247, 1921
PluTI	GGCGCC	1 cut(s)	244
PpsI	GAGTC	8 cut(s)	128, 146, 175, 188, 380, 626, 1247, 1921
PpuMI	RGGWCCY	1 cut(s)	1641
PshBI	ATTAAT	1 cut(s)	323
Psp124BI	GAGCTC	3 cut(s)	225, 888, 1313
Psp5II	RGGWCCY	1 cut(s)	1641
Psp6I	CCWGG	3 cut(s)	236, 1107, 1830
PspFI	CCCAGC	1 cut(s)	778
PspGI	CCWGG	3 cut(s)	236, 1107, 1830
PspN4I	GGNNCC	5 cut(s)	235, 242, 659, 1302, 1643
PspPI	GGNCC	7 cut(s)	417, 445, 529, 781, 1266, 1301, 1641
PspPPI	RGGWCCY	1 cut(s)	1641
PsuI	RGATCY	3 cut(s)	233, 657, 1711
PvuII	CAGCTG	1 cut(s)	605
RsaI	GTAC	7 cut(s)	437, 442, 485, 584, 740, 1594, 1836
RsaNI	GTAC	7 cut(s)	436, 441, 484, 583, 739, 1593, 1835
RseI	CAYNNNNRTG	4 cut(s)	1460, 1519, 1695, 2025
Rsr2I	CGGWCCG	1 cut(s)	417
RsrII	CGGWCCG	1 cut(s)	417
SacI	GAGCTC	3 cut(s)	225, 888, 1313
SacII	CCGCGG	3 cut(s)	400, 706, 765
SapI	GCTCTTC	1 cut(s)	692
SaqAI	TTAA	6 cut(s)	267, 323, 1014, 1152, 1248, 1343
Sau3AI	GATC	7 cut(s)	103, 233, 378, 657, 973, 1711, 1738
Sau96I	GGNCC	7 cut(s)	417, 445, 529, 781, 1266, 1301, 1641
SchI	GAGTC	8 cut(s)	128, 146, 176, 188, 380, 626, 1248, 1921
ScrFI	CCNGG	6 cut(s)	230, 231, 238, 278, 1109, 1832
SduI	GDGCHC	8 cut(s)	225, 888, 1101, 1313, 1330, 1484, 1510, 1692
SfaNI	GCATC	4 cut(s)	1507, 1538, 1561, 1990
SfoI	GGCGCC	1 cut(s)	242
Sfr303I	CCGCGG	3 cut(s)	400, 706, 765
SfuI	TTCGAA	1 cut(s)	252
SgrAI	CRCCGGYG	1 cut(s)	637
SgrBI	CCGCGG	3 cut(s)	400, 706, 765
SinI	GGWCC	3 cut(s)	417, 1301, 1641
SmaI	CCCGGG	1 cut(s)	231
SmiMI	CAYNNNNRTG	4 cut(s)	1460, 1519, 1695, 2025
SmlI	CTYRAG	2 cut(s)	1247, 1342
SmoI	CTYRAG	2 cut(s)	1247, 1342
SphI	GCATGC	2 cut(s)	1637, 1985
Sse9I	AATT	9 cut(s)	4, 320, 578, 590, 729, 928, 1131, 1283, 1813
SspDI	GGCGCC	1 cut(s)	240
SspMI	CTAG	4 cut(s)	906, 1217, 1748, 1784
SstI	GAGCTC	3 cut(s)	225, 888, 1313
StyD4I	CCNGG	6 cut(s)	228, 229, 236, 276, 1107, 1830
StyI	CCWWGG	6 cut(s)	471, 828, 936, 1200, 1672, 1869
TaaI	ACNGT	6 cut(s)	313, 440, 1091, 1305, 1894, 1951
TaiI	ACGT	1 cut(s)	1356
TaqI	TCGA	8 cut(s)	16, 225, 252, 381, 521, 626, 1321, 1845
TasI	AATT	9 cut(s)	4, 320, 578, 590, 729, 928, 1131, 1283, 1813
TatI	WGTACW	1 cut(s)	582
TauI	GCSGC	9 cut(s)	149, 402, 500, 510, 705, 708, 767, 819, 1619
TfiI	GAWTC	6 cut(s)	1255, 1334, 1429, 1469, 1757, 1847
Tru1I	TTAA	6 cut(s)	267, 323, 1014, 1152, 1248, 1343
Tru9I	TTAA	6 cut(s)	267, 323, 1014, 1152, 1248, 1343
TscAI	CASTG	2 cut(s)	1276, 2019
TseFI	GTSAC	1 cut(s)	1777
Tsp45I	GTSAC	1 cut(s)	1777
TspDTI	ATGAA	9 cut(s)	17, 70, 1162, 1220, 1503, 1560, 1623, 1706, 1839
TspGWI	ACGGA	4 cut(s)	312, 322, 409, 1707
TspMI	CCCGGG	1 cut(s)	229
TspRI	CASTG	2 cut(s)	1276, 2019
Vha464I	CTTAAG	2 cut(s)	1247, 1342
VneI	GTGCAC	1 cut(s)	1480
VpaK11BI	GGWCC	3 cut(s)	417, 1301, 1641
VspI	ATTAAT	1 cut(s)	323
XapI	RAATTY	2 cut(s)	4, 729
XceI	RCATGY	7 cut(s)	517, 1164, 1459, 1637, 1684, 1985, 2036
XmaI	CCCGGG	1 cut(s)	229
XmiI	GTMKAC	1 cut(s)	539
XmnI	GAANNNNTTC	1 cut(s)	614
XspI	CTAG	4 cut(s)	906, 1217, 1748, 1784
Zsp2I	ATGCAT	1 cut(s)	1686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.