Rh7BG014200

Protein sel-1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
911673 .. 915172
3500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG014200.1

Sequence Viewer

Length: 1500 bp
ATGTTTGAGAAAGCGGTGAAGCTGTACTCGGAATTAGCCGAGGCAGCTGTGAATAGCTTCTTGATTTCAAAGGACTCTCCGGTGATTGAGCCGGTGAGGATCCACAATGGAGCTGAAGAGAATAAGGAGGCATTGAGGAAAAGCCGAGGGGAAGAAGATGAGGACTTTCAGATTCTGGAGTATCAGGCTCAGAAGGGGAATTCTCTGGCAATGTATAAGATTGGCCTCTTTTACTATTTTGGGCTCAGAGGGTTGCGCCGTGACCATGCTAAGGCATTGTCGTGGTTTCTCAAGTCTGTGGAGAAGGGAGAGCCTAGGGCTATGGAGTTTCTTGGTGAGATTTATGCTAGAGGAGCTGGGGTTGAGAGGAATTACACTAAGGCTCTGGAGTGGCTTACATTAGCATCTAAACAAGAACTGTATTCGGCTTATAATGGGATGGGCTATTTGTATGTTAAAGGATATGGAGTGGAGAAGAAGAACTACACTAAGGCAAAAGAGTACTTTGAGAAGGCTGCTGAGAATCGAGATGCTGGCGGGCACTATAACTTGGGAGTACTTTATCTCAAAGGGATTGGGGTAAAAAAAGATGTGAAACTTGCATGCCAGTACTTTATAGTGGCTGCTAATCACGGTCAACCAAAGGCATTCTACCAGCTTGCAAAGATGTTTCATGCTGGAGTGGGGCTTAAGAAAAATCTTCCCAGGGCTACTGTGTTGTACAAACTAGTTGCTGAAAGGGGGCCATGGAGTTCCTTGTCCAGATGGGCACTGGAGTCATACTTAAAGGGGGATGTGGGGAAGGCATTTTTCTTATACTCAAGGATGGCTGAGTTAGGGTATGAGGTAGCGCAAAGTAACGCTGCATGGATTCTTGACAAGTACGGAGAACATAGCATGTGCATGGGAGAATCTGGCTTTTGTACAGATGCAGAAAGGCATCAGCGGGCACATTCTTTGTGGTGGCAAGCATCTGAGCAGGGTAACGAACATGCTGCTTTGCTGATTGGGGACGCATATTACTATGGTCAGGGTACTGAGAGGGATTTTGAACGTGCAGCAGAGGCTTACAAGCATGCTAAGTCCCAATCTAATGCACAAGCCATGTTCAACCTCGGCTACATGCATGAGCATGGACAAGGATTACCTTTGGATCTCCATCTTGCCAAACGTTACTATGATCAAGCCCTAGAGATTGATCCGGCAGCAAAGTTACCAGTCACGCTAGCCCTTGCAAGCTTATGGATACGAAAGAATTATGCCGATGGTTTTCTGGTCCATTTGATCGACTCATTGCCTGAAGTCTATCCAAAATTGGAAGAATGGATAGATGACGTGTTGCTTGAGGAAGGAAATGCAACAATATTGACTCTTTTTGTTTGTCTCCTCACTGTCCTATATCTCCGTGAGCGACAACGCAGGCATGCTGTAGTAGTCCCTGCTGGAGTGGCTATGCCGCACCAACCAAATGAGCTTGTTGCACCTGCACCTGTCATTTAG

Protein Analysis

499

Amino Acids

56.45

Weight (kDa)

6.98

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sel1 PF08238 69 - 103 1.2e-06 Sel1 repeat
Sel1 PF08238 105 - 138 2e-07 Sel1 repeat
Sel1 PF08238 143 - 175 3.7e-07 Sel1 repeat
Sel1 PF08238 181 - 212 6.5e-06 Sel1 repeat
Sel1 PF08238 366 - 397 3.7e-07 Sel1 repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011902)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
AarI CACCTGC 1 cut(s) 1492
Acc36I ACCTGC 1 cut(s) 1492
AciI CCGC 4 cut(s) 14, 537, 946, 1457
AclI AACGTT 1 cut(s) 1171
AclWI GGATC 4 cut(s) 94, 107, 1161, 1193
AcsI RAATTY 1 cut(s) 199
AcuI CTGAAG 2 cut(s) 135, 1320
AfaI GTAC 8 cut(s) 26, 503, 558, 611, 722, 884, 925, 1036
AfiI CCNNNNNNNGG 1 cut(s) 271
AflII CTTAAG 1 cut(s) 689
AflIII ACRYGT 1 cut(s) 1335
AgsI TTSAA 3 cut(s) 69, 1052, 1111
AhlI ACTAGT 1 cut(s) 727
AjiI CACGTC 1 cut(s) 1336
AjnI CCWGG 1 cut(s) 704
AluBI AGCT 8 cut(s) 22, 47, 57, 113, 356, 658, 1239, 1474
AluI AGCT 8 cut(s) 22, 47, 57, 113, 356, 658, 1239, 1474
Alw26I GTCTC 1 cut(s) 1388
AlwI GGATC 4 cut(s) 94, 107, 1161, 1193
AlwNI CAGNNNCTG 1 cut(s) 175
AoxI GGCC 2 cut(s) 223, 743
ApeKI GCWGC 7 cut(s) 44, 515, 623, 863, 995, 1058, 1205
ApoI RAATTY 1 cut(s) 199
Asp700I GAANNNNTTC 1 cut(s) 56
AspA2I CCTAGG 1 cut(s) 314
AspLEI GCGC 2 cut(s) 258, 853
AspS9I GGNCC 2 cut(s) 743, 1276
AsuHPI GGTGA 4 cut(s) 28, 94, 106, 347
AsuNHI GCTAGC 1 cut(s) 1225
AvaII GGWCC 1 cut(s) 1276
AvrII CCTAGG 1 cut(s) 314
BaeGI GKGCMC 3 cut(s) 543, 772, 952
BamHI GGATCC 1 cut(s) 99
BanII GRGCYC 1 cut(s) 246
BarI GAAGNNNNNNTAC 2 cut(s) 467, 499
BbvI GCAGC 7 cut(s) 56, 502, 610, 850, 982, 1070, 1217
BccI CCATC 5 cut(s) 433, 759, 820, 1167, 1259
BceAI ACGGC 1 cut(s) 243
BcgI CGANNNNNNTGC 2 cut(s) 977, 1011
BciT130I CCWGG 1 cut(s) 706
BciVI GTATCC 1 cut(s) 1239
BclI TGATCA 1 cut(s) 1180
BcoDI GTCTC 1 cut(s) 1388
BcuI ACTAGT 1 cut(s) 727
BfaI CTAG 5 cut(s) 315, 348, 728, 1190, 1226
BfmI CTRYAG 1 cut(s) 1428
BfrI CTTAAG 1 cut(s) 689
BfuAI ACCTGC 1 cut(s) 1492
BfuI GTATCC 1 cut(s) 1239
BisI GCNGC 8 cut(s) 45, 516, 624, 864, 996, 1059, 1206, 1457
BlnI CCTAGG 1 cut(s) 314
BlsI GCNGC 8 cut(s) 46, 517, 625, 865, 997, 1060, 1207, 1458
BmcAI AGTACT 3 cut(s) 503, 558, 611
Bme1390I CCNGG 1 cut(s) 706
Bme18I GGWCC 1 cut(s) 1276
BmgBI CACGTC 1 cut(s) 1336
BmgT120I GGNCC 2 cut(s) 743, 1276
BmiI GGNNCC 2 cut(s) 101, 744
BmrFI CCNGG 1 cut(s) 706
BmsI GCATC 5 cut(s) 413, 520, 919, 949, 980
BmtI GCTAGC 1 cut(s) 1229
BpmI CTGGAG 5 cut(s) 197, 407, 699, 794, 1464
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 3 cut(s) 275, 805, 1364
BsaBI GATNNNNATC 1 cut(s) 1158
BsaJI CCNNGG 7 cut(s) 39, 145, 314, 704, 705, 746, 1114
BsaWI WCCGGW 1 cut(s) 79
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bsc4I CCNNNNNNNGG 1 cut(s) 271
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 3 cut(s) 607, 777, 1217
Bse3DI GCAATG 2 cut(s) 216, 1292
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 1 cut(s) 706
BseDI CCNNGG 7 cut(s) 39, 145, 314, 704, 705, 746, 1114
BseGI GGATG 3 cut(s) 444, 799, 831
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 1 cut(s) 271
BseMI GCAATG 2 cut(s) 216, 1292
BseMII CTCAG 6 cut(s) 203, 259, 510, 822, 966, 1029
BseNI ACTGG 3 cut(s) 607, 777, 1217
BseRI GAGGAG 2 cut(s) 366, 1376
BseSI GKGCMC 3 cut(s) 543, 772, 952
BseXI GCAGC 7 cut(s) 56, 502, 610, 850, 982, 1070, 1217
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 2 cut(s) 1077, 1470
BshFI GGCC 2 cut(s) 225, 745
BsiSI CCGG 3 cut(s) 80, 92, 1202
BslFI GGGAC 3 cut(s) 1025, 1069, 1421
BslI CCNNNNNNNGG 1 cut(s) 271
BsmAI GTCTC 1 cut(s) 1388
BsmFI GGGAC 3 cut(s) 1025, 1069, 1421
BsmI GAATGC 1 cut(s) 647
BsnI GGCC 2 cut(s) 225, 745
Bsp1286I GDGCHC 4 cut(s) 246, 543, 772, 952
Bsp1407I TGTACA 2 cut(s) 720, 923
Bsp143I GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
Bsp19I CCATGG 1 cut(s) 746
BspACI CCGC 4 cut(s) 14, 537, 946, 1457
BspANI GGCC 2 cut(s) 225, 745
BspCNI CTCAG 6 cut(s) 202, 258, 511, 823, 967, 1030
BspLI GGNNCC 2 cut(s) 101, 744
BspMI ACCTGC 1 cut(s) 1492
BspOI GCTAGC 1 cut(s) 1229
BspPI GGATC 4 cut(s) 94, 107, 1161, 1193
BspTI CTTAAG 1 cut(s) 689
BsrDI GCAATG 2 cut(s) 216, 1292
BsrFI RCCGGY 1 cut(s) 91
BsrGI TGTACA 2 cut(s) 720, 923
BsrI ACTGG 3 cut(s) 607, 777, 1217
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 7 cut(s) 39, 145, 314, 704, 705, 746, 1114
BssMI GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
BssT1I CCWWGG 2 cut(s) 314, 746
Bst2UI CCWGG 1 cut(s) 706
Bst4CI ACNGT 4 cut(s) 420, 635, 715, 1393
Bst6I CTCTTC 1 cut(s) 111
BstAFI CTTAAG 1 cut(s) 689
BstAUI TGTACA 2 cut(s) 720, 923
BstDSI CCRYGG 1 cut(s) 746
BstF5I GGATG 3 cut(s) 444, 799, 831
BstHHI GCGC 2 cut(s) 258, 853
BstKTI GATC 5 cut(s) 102, 1156, 1183, 1201, 1287
BstMAI GTCTC 1 cut(s) 1388
BstMBI GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
BstMWI GCNNNNNNNGC 4 cut(s) 44, 353, 1064, 1448
BstNI CCWGG 1 cut(s) 706
BstNSI RCATGY 6 cut(s) 606, 901, 995, 1079, 1126, 1427
BstSCI CCNGG 1 cut(s) 704
BstSFI CTRYAG 1 cut(s) 1428
BstSLI GKGCMC 3 cut(s) 543, 772, 952
BstV1I GCAGC 7 cut(s) 56, 502, 610, 850, 982, 1070, 1217
BstX2I RGATCY 2 cut(s) 99, 1153
BstYI RGATCY 2 cut(s) 99, 1153
BsuI GTATCC 1 cut(s) 1239
BsuRI GGCC 2 cut(s) 225, 745
BtgI CCRYGG 1 cut(s) 746
BtrI CACGTC 1 cut(s) 1336
BtsCI GGATG 3 cut(s) 444, 799, 831
BtsIMutI CAGTG 2 cut(s) 770, 1389
BveI ACCTGC 1 cut(s) 1492
CaiI CAGNNNCTG 1 cut(s) 175
CfoI GCGC 2 cut(s) 258, 853
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 2 cut(s) 743, 1276
CseI GACGC 1 cut(s) 1022
Csp6I GTAC 8 cut(s) 25, 502, 557, 610, 721, 883, 924, 1035
CviQI GTAC 8 cut(s) 25, 502, 557, 610, 721, 883, 924, 1035
DpnI GATC 5 cut(s) 101, 1155, 1182, 1200, 1286
DpnII GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
Eam1104I CTCTTC 1 cut(s) 111
EarI CTCTTC 1 cut(s) 111
Eco130I CCWWGG 2 cut(s) 314, 746
Eco24I GRGCYC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 1276
Eco57I CTGAAG 2 cut(s) 135, 1320
EcoRI GAATTC 1 cut(s) 199
EcoRII CCWGG 1 cut(s) 704
EcoT14I CCWWGG 2 cut(s) 314, 746
EcoT22I ATGCAT 1 cut(s) 1128
EcoT38I GRGCYC 1 cut(s) 246
ErhI CCWWGG 2 cut(s) 314, 746
FaqI GGGAC 3 cut(s) 1025, 1069, 1421
FauI CCCGC 2 cut(s) 530, 939
FbaI TGATCA 1 cut(s) 1180
Fnu4HI GCNGC 8 cut(s) 45, 516, 624, 864, 996, 1059, 1206, 1457
FokI GGATG 3 cut(s) 451, 806, 838
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 8 cut(s) 45, 516, 624, 864, 996, 1059, 1206, 1457
FspBI CTAG 5 cut(s) 315, 348, 728, 1190, 1226
GlaI GCGC 2 cut(s) 257, 852
GluI GCNGC 8 cut(s) 45, 516, 624, 864, 996, 1059, 1206, 1457
GsaI CCCAGC 1 cut(s) 360
GsuI CTGGAG 5 cut(s) 197, 407, 699, 794, 1464
HaeIII GGCC 2 cut(s) 225, 745
HapII CCGG 3 cut(s) 80, 92, 1202
HgaI GACGC 1 cut(s) 1022
HhaI GCGC 2 cut(s) 258, 853
Hin6I GCGC 2 cut(s) 256, 851
HinP1I GCGC 2 cut(s) 256, 851
HincII GTYRAC 1 cut(s) 638
HindII GTYRAC 1 cut(s) 638
HindIII AAGCTT 1 cut(s) 1237
HinfI GANTC 8 cut(s) 74, 172, 523, 776, 871, 911, 1289, 1369
HpaII CCGG 3 cut(s) 80, 92, 1202
HphI GGTGA 4 cut(s) 28, 94, 106, 347
Hpy166II GTNNAC 1 cut(s) 638
Hpy188I TCNGA 5 cut(s) 31, 171, 192, 248, 976
Hpy188III TCNNGA 6 cut(s) 61, 176, 386, 527, 762, 875
Hpy8I GTNNAC 1 cut(s) 638
HpyAV CCTTC 5 cut(s) 187, 298, 505, 796, 1343
HpyCH4III ACNGT 4 cut(s) 420, 635, 715, 1393
HpyCH4IV ACGT 3 cut(s) 1054, 1171, 1335
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 353, 1064, 1448
HpySE526I ACGT 3 cut(s) 1054, 1171, 1335
HspAI GCGC 2 cut(s) 256, 851
Ksp22I TGATCA 1 cut(s) 1180
Kzo9I GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
LmnI GCTCC 2 cut(s) 110, 353
Lsp1109I GCAGC 7 cut(s) 56, 502, 610, 850, 982, 1070, 1217
LweI GCATC 5 cut(s) 413, 520, 919, 949, 980
MaeI CTAG 5 cut(s) 315, 348, 728, 1190, 1226
MaeII ACGT 3 cut(s) 1054, 1171, 1335
MaeIII GTNAC 6 cut(s) 260, 857, 983, 1172, 1212, 1219
MalI GATC 5 cut(s) 101, 1155, 1182, 1200, 1286
MboI GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
MboII GAAGA 7 cut(s) 128, 164, 167, 487, 490, 692, 1331
MflI RGATCY 2 cut(s) 99, 1153
MhlI GDGCHC 4 cut(s) 246, 543, 772, 952
MluCI AATT 5 cut(s) 32, 199, 370, 1255, 1313
MlyI GAGTC 4 cut(s) 68, 785, 1283, 1363
Mph1103I ATGCAT 1 cut(s) 1128
MroXI GAANNNNTTC 1 cut(s) 56
MseI TTAA 3 cut(s) 456, 690, 785
MslI CAYNNNNRTG 3 cut(s) 280, 902, 1131
MspA1I CMGCKG 2 cut(s) 47, 946
MspCI CTTAAG 1 cut(s) 689
MspI CCGG 3 cut(s) 80, 92, 1202
MspR9I CCNGG 1 cut(s) 706
Mva1269I GAATGC 1 cut(s) 647
MvaI CCWGG 1 cut(s) 706
MwoI GCNNNNNNNGC 4 cut(s) 44, 353, 1064, 1448
NcoI CCATGG 1 cut(s) 746
NdeII GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
NheI GCTAGC 1 cut(s) 1225
NlaIV GGNNCC 2 cut(s) 101, 744
NmeAIII GCCGAG 3 cut(s) 64, 170, 1095
NmuCI GTSAC 2 cut(s) 260, 1219
NsiI ATGCAT 1 cut(s) 1128
NspI RCATGY 6 cut(s) 606, 901, 995, 1079, 1126, 1427
PaeI GCATGC 3 cut(s) 606, 1079, 1427
PaqCI CACCTGC 1 cut(s) 1492
PasI CCCWGGG 1 cut(s) 705
PctI GAATGC 1 cut(s) 647
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 4 cut(s) 172, 523, 871, 911
PkrI GCNGC 8 cut(s) 46, 517, 625, 865, 997, 1060, 1207, 1458
PleI GAGTC 4 cut(s) 68, 784, 1283, 1363
PpsI GAGTC 4 cut(s) 68, 784, 1283, 1363
PsiI TTATAA 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 1171
Psp6I CCWGG 1 cut(s) 704
PspFI CCCAGC 1 cut(s) 356
PspGI CCWGG 1 cut(s) 704
PspN4I GGNNCC 2 cut(s) 101, 744
PspPI GGNCC 2 cut(s) 743, 1276
PstNI CAGNNNCTG 1 cut(s) 175
PsuI RGATCY 2 cut(s) 99, 1153
PvuII CAGCTG 1 cut(s) 47
RsaI GTAC 8 cut(s) 26, 503, 558, 611, 722, 884, 925, 1036
RsaNI GTAC 8 cut(s) 25, 502, 557, 610, 721, 883, 924, 1035
RseI CAYNNNNRTG 3 cut(s) 280, 902, 1131
SaqAI TTAA 3 cut(s) 456, 690, 785
SatI GCNGC 8 cut(s) 45, 516, 624, 864, 996, 1059, 1206, 1457
Sau3AI GATC 5 cut(s) 99, 1153, 1180, 1198, 1284
Sau96I GGNCC 2 cut(s) 743, 1276
ScaI AGTACT 3 cut(s) 503, 558, 611
SchI GAGTC 4 cut(s) 68, 785, 1283, 1363
ScrFI CCNGG 1 cut(s) 706
SduI GDGCHC 4 cut(s) 246, 543, 772, 952
SfaNI GCATC 5 cut(s) 413, 520, 919, 949, 980
SfcI CTRYAG 1 cut(s) 1428
SinI GGWCC 1 cut(s) 1276
SmiMI CAYNNNNRTG 3 cut(s) 280, 902, 1131
SmlI CTYRAG 4 cut(s) 290, 689, 820, 1343
SmoI CTYRAG 4 cut(s) 290, 689, 820, 1343
SpeI ACTAGT 1 cut(s) 727
SphI GCATGC 3 cut(s) 606, 1079, 1427
Sse9I AATT 5 cut(s) 32, 199, 370, 1255, 1313
SsiI CCGC 4 cut(s) 14, 537, 946, 1457
SspI AATATT 1 cut(s) 1365
SspMI CTAG 5 cut(s) 315, 348, 728, 1190, 1226
StyD4I CCNGG 1 cut(s) 704
StyI CCWWGG 2 cut(s) 314, 746
TaaI ACNGT 4 cut(s) 420, 635, 715, 1393
TaiI ACGT 3 cut(s) 1057, 1174, 1338
TaqI TCGA 2 cut(s) 526, 1287
TasI AATT 5 cut(s) 32, 199, 370, 1255, 1313
TatI WGTACW 6 cut(s) 24, 501, 556, 609, 720, 923
TauI GCSGC 1 cut(s) 1459
TfiI GAWTC 4 cut(s) 172, 523, 871, 911
Tru1I TTAA 3 cut(s) 456, 690, 785
Tru9I TTAA 3 cut(s) 456, 690, 785
TscAI CASTG 2 cut(s) 777, 1396
TseFI GTSAC 2 cut(s) 260, 1219
TseI GCWGC 7 cut(s) 44, 515, 623, 863, 995, 1058, 1205
Tsp45I GTSAC 2 cut(s) 260, 1219
TspDTI ATGAA 1 cut(s) 662
TspGWI ACGGA 2 cut(s) 900, 1394
TspRI CASTG 2 cut(s) 777, 1396
Vha464I CTTAAG 1 cut(s) 689
VpaK11BI GGWCC 1 cut(s) 1276
XapI RAATTY 1 cut(s) 199
XceI RCATGY 6 cut(s) 606, 901, 995, 1079, 1126, 1427
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XmaJI CCTAGG 1 cut(s) 314
XmnI GAANNNNTTC 1 cut(s) 56
XspI CTAG 5 cut(s) 315, 348, 728, 1190, 1226
ZrmI AGTACT 3 cut(s) 503, 558, 611
Zsp2I ATGCAT 1 cut(s) 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.