FvH4_5g20460

Phospho-2-dehydro-3-deoxyheptonate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012776
Physical Location & Seq
Reverse (-)
12116434 .. 12119819
3386 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20460.t1

Sequence Viewer

Length: 1542 bp
ATGTCTCTGACAGCCGCCGCCGCCTCTCCTAATCTCACCGCCCCAAACCCCTTCCTCTCCCGTACCACCCTTTTCAAGCCTTCCCAACTCCTCACCCTCCCCAGAACTTCCAGAACATTAATCTCCGCTGTCTCCTCAACAATCTCCTCCTCCGACTGGGCCGTGGACTCATGGAAATCCAAGACGGCCCATCAGCTCCCGGTTTACCCCGACCCGGACGAGCTCCGGTCCGTGTTGACCACCCTGGAGACGTTCCCGCCAATTGTGTTTGCTGGAGAGGCCAGGCGGCTGGAGACCTTGCTGGGCAAGGCGGCTCAGGGTGAGGCCTTTTTGCTTCAGGGTGGGGATTGCGCTGAGAGCTTCAAGGAGTTTAATGCTAATAATATTAGGGATACCTTCAGAGTGTTCTTGCAGATGGCCATCACTTTGATTTATGGGGCCCAAATGCCAGTCATCAAGGTTGGGAGAATGGCAGGTCAATTTGCAAAGCCTAGGTCTGATAATTTTGAGACTAGAGATGGCGTGAAGCTCCCAAGTTATCGCGGAGACAATATCAATGGTGATGCTTTTGATGAGAAATCAAGAATACCAGACCCACAAAGGTTACTTAGAGCATATCTACAATCTGTTGGTACACTGAATCTCCTCAGAGCTTTTGCCACTGGTGGTTATGCTGCAATGCAGAGAGTCTCAGATTGGAATCTTGACTTCGTGGAGCATAGTGAGCAAGCAGACAGGTACATGGAACTTGCACAGCGAGTGGATGAAGCTATTGGATTCCTTAGTGCTGCTGGGGTTACTCAGAACAATCCAATCATGAATACAATTGAGTTTTGGATATCTCATGAATGCCTCCATTTACCATATGAGCAGGCCTTGACTAGGGAGGATTCAACATCTGGCCTATACTATGATTGTTCTGCCCACATGCTTTGGGTAGGGGAGAGGACTCGACAATTGGATGGTGCACATATTGAATTCCTTCGTGGTGTATCCAATCCTCTTGGCATTAAGGTGAGTGATAAGATGGACCCAACTGAGCTTGTGAGACTATGTGAGATTCTTAACCCTCATAACAAACCTGGTAGACTGACAATAATTACCAGGATGGGAGCAGATAACATGCGGGTAAAGCTCCCCCATTTGATAAGAGCTGTCCGCCAGGCAGGGCTTATCGTTACATGGGTCAGTGACCCCATGCATGGGAACACAATAAAGGCTCCGTGTGGGCTGAAGACACGGCCATTTGATTCAATCAGGGCTGAATTGAGGGCTTTCTTCGATGTCCATGACCAAGAGGGGAGCTATCCTGGAGGAGTGCATCTGGAAATGACTGGGCAGAATGTAACTGAGTGCATCGGAGGGTCAAAGACTGTGACTGTAAATGACTTGAACTCCCGATACCACACACATTGTGACCCCAGACTGAACGCATCGCAGTCACTTGAGTTGGCCTTTCTAATAGCAGATAGGTTGAGGAAAGACAGGTTGAAAAGATCATCTAGGACTGATTCTCAGATGAGTGGCAGTGCTTCAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024
Pfam Domains
Protein Families
DAHP_synth_2

Protein Analysis

514

Amino Acids

57.03

Weight (kDa)

7.21

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAHP_synth_2 PF01474 53 - 489 8.5e-203 Class-II DAHP synthetase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012776)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33510
fragaria_vesca FvH4_5g20460
malus_domestica MD04G1055100.v1.1 MD05G1042700.v1.1
prunus_persica Prupe.5G055000_v2.0.a1 Prupe.8G064200_v2.0.a1
pyrus_communis pycom05g03530
rosa_chinensis RchiOBHm_Chr7g0205781
rosa_laevigata RLG00000003355
rosa_multiflora Rmu_co8369421.1_g000001 Rmu_sc0000076.1_g000051 Rmu_sc0008518.1_g000012
rosa_roxburghii Rroxscaffold_3G00251990
rosa_rugosa Rorug07G0093000
rosa_samantha Rh7AG224500 Rh7CG238100 Rh7DG231200
rosa_wichuraiana Rw7G019360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 464
AccI GTMKAC 1 cut(s) 1087
AccII CGCG 1 cut(s) 543
AcoI YGGCCR 2 cut(s) 417, 1241
AcsI RAATTY 1 cut(s) 977
AcuI CTGAAG 4 cut(s) 320, 382, 1253, 1518
AdeI CACNNNGTG 1 cut(s) 1415
AfaI GTAC 3 cut(s) 64, 634, 740
AfiI CCNNNNNNNGG 5 cut(s) 156, 214, 882, 1202, 1203
AgsI TTSAA 7 cut(s) 76, 364, 894, 977, 1254, 1393, 1492
AjnI CCWGG 6 cut(s) 243, 281, 1081, 1103, 1161, 1309
Alw21I GWGCWC 2 cut(s) 225, 970
Alw26I GTCTC 8 cut(s) 9, 136, 242, 287, 503, 540, 694, 1042
Alw44I GTGCAC 1 cut(s) 966
ApaI GGGCCC 1 cut(s) 442
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 2 cut(s) 674, 788
ApoI RAATTY 1 cut(s) 977
ArsI GACNNNNNNTTYG 2 cut(s) 479, 511
AseI ATTAAT 1 cut(s) 119
Asp700I GAANNNNTTC 1 cut(s) 981
AspA2I CCTAGG 1 cut(s) 491
AspLEI GCGC 1 cut(s) 353
AspS9I GGNCC 6 cut(s) 159, 187, 228, 438, 439, 1030
AsuC2I CCSGG 2 cut(s) 200, 215
AsuHPI GGTGA 5 cut(s) 28, 85, 332, 572, 1027
AvaII GGWCC 2 cut(s) 228, 1030
AvrII CCTAGG 1 cut(s) 491
BaeGI GKGCMC 2 cut(s) 442, 970
BalI TGGCCA 1 cut(s) 419
BanII GRGCYC 2 cut(s) 225, 442
BbsI GAAGAC 1 cut(s) 1241
Bbv12I GWGCWC 2 cut(s) 225, 970
BbvI GCAGC 2 cut(s) 661, 775
BccI CCATC 7 cut(s) 198, 409, 428, 512, 956, 1021, 1102
BceAI ACGGC 3 cut(s) 146, 201, 1256
BciT130I CCWGG 6 cut(s) 245, 283, 1083, 1105, 1163, 1311
BciVI GTATCC 2 cut(s) 385, 1003
BcnI CCSGG 2 cut(s) 200, 215
BcoDI GTCTC 8 cut(s) 9, 136, 242, 287, 503, 540, 694, 1042
BfaI CTAG 4 cut(s) 492, 513, 882, 1503
BfuAI ACCTGC 1 cut(s) 464
BfuI GTATCC 2 cut(s) 385, 1003
BisI GCNGC 7 cut(s) 15, 18, 21, 287, 312, 675, 789
BlnI CCTAGG 1 cut(s) 491
BlsI GCNGC 7 cut(s) 16, 19, 22, 288, 313, 676, 790
Bme1390I CCNGG 8 cut(s) 200, 215, 245, 283, 1083, 1105, 1163, 1311
Bme18I GGWCC 2 cut(s) 228, 1030
BmgT120I GGNCC 6 cut(s) 159, 187, 228, 438, 439, 1030
BmiI GGNNCC 4 cut(s) 439, 440, 1032, 1221
BmrFI CCNGG 8 cut(s) 200, 215, 245, 283, 1083, 1105, 1163, 1311
BmrI ACTGGG 2 cut(s) 166, 1344
BmsI GCATC 4 cut(s) 553, 1330, 1365, 1442
BmuI ACTGGG 2 cut(s) 166, 1344
BpiI GAAGAC 1 cut(s) 1241
BpmI CTGGAG 4 cut(s) 266, 294, 311, 1332
Bpu10I CCTNAGC 1 cut(s) 315
BpuEI CTTGAG 1 cut(s) 1466
BpuMI CCSGG 2 cut(s) 200, 215
BsaBI GATNNNNATC 2 cut(s) 419, 699
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 3 cut(s) 162, 243, 491
BsaWI WCCGGW 1 cut(s) 225
BsaXI ACNNNNNCTCC 4 cut(s) 627, 657, 1379, 1409
Bsc4I CCNNNNNNNGG 5 cut(s) 156, 214, 882, 1202, 1203
Bse1I ACTGG 4 cut(s) 161, 449, 667, 1339
Bse3DI GCAATG 1 cut(s) 684
Bse8I GATNNNNATC 2 cut(s) 419, 699
BseBI CCWGG 6 cut(s) 245, 283, 1083, 1105, 1163, 1311
BseDI CCNNGG 3 cut(s) 162, 243, 491
BseGI GGATG 3 cut(s) 769, 967, 1113
BseJI GATNNNNATC 2 cut(s) 419, 699
BseLI CCNNNNNNNGG 5 cut(s) 156, 214, 882, 1202, 1203
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 8 cut(s) 329, 345, 661, 705, 815, 1029, 1341, 1529
BseNI ACTGG 4 cut(s) 161, 449, 667, 1339
BseRI GAGGAG 6 cut(s) 80, 124, 136, 139, 635, 1329
BseSI GKGCMC 2 cut(s) 442, 970
BseXI GCAGC 2 cut(s) 661, 775
BseYI CCCAGC 2 cut(s) 301, 791
Bsh1236I CGCG 1 cut(s) 543
BsiHKAI GWGCWC 2 cut(s) 225, 970
BsiSI CCGG 3 cut(s) 200, 215, 226
BslI CCNNNNNNNGG 5 cut(s) 156, 214, 882, 1202, 1203
BsmAI GTCTC 8 cut(s) 9, 136, 242, 287, 503, 540, 694, 1042
BsmBI CGTCTC 1 cut(s) 242
BsmI GAATGC 1 cut(s) 854
Bso31I GGTCTC 1 cut(s) 287
Bsp120I GGGCCC 1 cut(s) 438
Bsp1286I GDGCHC 3 cut(s) 225, 442, 970
Bsp143I GATC 1 cut(s) 1496
BspCNI CTCAG 8 cut(s) 328, 346, 660, 704, 814, 1030, 1342, 1528
BspFNI CGCG 1 cut(s) 543
BspHI TCATGA 2 cut(s) 816, 844
BspLI GGNNCC 4 cut(s) 439, 440, 1032, 1221
BspMI ACCTGC 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 1 cut(s) 684
BsrI ACTGG 4 cut(s) 161, 449, 667, 1339
BssECI CCNNGG 3 cut(s) 162, 243, 491
BssMI GATC 1 cut(s) 1496
BssT1I CCWWGG 1 cut(s) 491
Bst2UI CCWGG 6 cut(s) 245, 283, 1083, 1105, 1163, 1311
Bst4CI ACNGT 2 cut(s) 1375, 1381
BstC8I GCNNGC 2 cut(s) 729, 873
BstDSI CCRYGG 1 cut(s) 162
BstENI CCTNNNNNAGG 1 cut(s) 880
BstF5I GGATG 3 cut(s) 769, 967, 1113
BstFNI CGCG 1 cut(s) 543
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 1 cut(s) 1499
BstMAI GTCTC 8 cut(s) 9, 136, 242, 287, 503, 540, 694, 1042
BstMBI GATC 1 cut(s) 1496
BstMWI GCNNNNNNNGC 5 cut(s) 20, 278, 357, 724, 1132
BstNI CCWGG 6 cut(s) 245, 283, 1083, 1105, 1163, 1311
BstNSI RCATGY 2 cut(s) 931, 1126
BstSCI CCNGG 8 cut(s) 198, 213, 243, 281, 1081, 1103, 1161, 1309
BstSLI GKGCMC 2 cut(s) 442, 970
BstUI CGCG 1 cut(s) 543
BstV1I GCAGC 2 cut(s) 661, 775
BstV2I GAAGAC 1 cut(s) 1241
BstXI CCANNNNNNTGG 1 cut(s) 289
BsuI GTATCC 2 cut(s) 385, 1003
BtgI CCRYGG 1 cut(s) 162
BtgZI GCGATG 1 cut(s) 1419
BtsCI GGATG 3 cut(s) 769, 967, 1113
BtsI GCAGTG 1 cut(s) 1534
BtsIMutI CAGTG 5 cut(s) 635, 660, 1195, 1534, 1542
BveI ACCTGC 1 cut(s) 464
Cac8I GCNNGC 2 cut(s) 729, 873
CciI TCATGA 2 cut(s) 816, 844
CfoI GCGC 1 cut(s) 353
Cfr13I GGNCC 6 cut(s) 159, 187, 228, 438, 439, 1030
CpoI CGGWCCG 1 cut(s) 228
CsiI ACCWGGT 1 cut(s) 1081
Csp6I GTAC 3 cut(s) 63, 633, 739
CspCI CAANNNNNGTGG 4 cut(s) 914, 949, 1394, 1429
CspI CGGWCCG 1 cut(s) 228
CviQI GTAC 3 cut(s) 63, 633, 739
DpnI GATC 1 cut(s) 1498
DpnII GATC 1 cut(s) 1496
DraIII CACNNNGTG 1 cut(s) 1415
EaeI YGGCCR 2 cut(s) 417, 1241
EciI GGCGGA 1 cut(s) 1148
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 491
Eco147I AGGCCT 2 cut(s) 326, 875
Eco24I GRGCYC 2 cut(s) 225, 442
Eco31I GGTCTC 1 cut(s) 287
Eco32I GATATC 1 cut(s) 840
Eco47I GGWCC 2 cut(s) 228, 1030
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 4 cut(s) 320, 382, 1253, 1518
EcoICRI GAGCTC 1 cut(s) 223
EcoNI CCTNNNNNAGG 1 cut(s) 880
EcoO109I RGGNCCY 1 cut(s) 438
EcoRI GAATTC 1 cut(s) 977
EcoRII CCWGG 6 cut(s) 243, 281, 1081, 1103, 1161, 1309
EcoRV GATATC 1 cut(s) 840
EcoT14I CCWWGG 1 cut(s) 491
EcoT22I ATGCAT 1 cut(s) 1203
EcoT38I GRGCYC 2 cut(s) 225, 442
ErhI CCWWGG 1 cut(s) 491
Esp3I CGTCTC 1 cut(s) 242
FauI CCCGC 2 cut(s) 264, 1119
FauNDI CATATG 1 cut(s) 865
FblI GTMKAC 1 cut(s) 1087
Fnu4HI GCNGC 7 cut(s) 15, 18, 21, 287, 312, 675, 789
FokI GGATG 3 cut(s) 776, 974, 1120
FriOI GRGCYC 2 cut(s) 225, 442
Fsp4HI GCNGC 7 cut(s) 15, 18, 21, 287, 312, 675, 789
FspBI CTAG 4 cut(s) 492, 513, 882, 1503
GlaI GCGC 1 cut(s) 352
GluI GCNGC 7 cut(s) 15, 18, 21, 287, 312, 675, 789
GsaI CCCAGC 2 cut(s) 305, 795
GsuI CTGGAG 4 cut(s) 266, 294, 311, 1332
HapII CCGG 3 cut(s) 200, 215, 226
HhaI GCGC 1 cut(s) 353
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 1 cut(s) 237
HindII GTYRAC 1 cut(s) 237
HpaII CCGG 3 cut(s) 200, 215, 226
HphI GGTGA 5 cut(s) 28, 85, 332, 572, 1027
Hpy166II GTNNAC 6 cut(s) 166, 205, 237, 635, 968, 1088
Hpy188I TCNGA 9 cut(s) 9, 154, 401, 499, 650, 694, 804, 1361, 1518
Hpy188III TCNNGA 7 cut(s) 111, 582, 704, 817, 845, 1325, 1398
Hpy8I GTNNAC 6 cut(s) 166, 205, 237, 635, 968, 1088
HpyAV CCTTC 4 cut(s) 61, 90, 406, 992
HpyCH4III ACNGT 2 cut(s) 1375, 1381
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 9 cut(s) 412, 485, 677, 682, 752, 968, 1201, 1321, 1356
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 278, 357, 724, 1132
HpySE526I ACGT 1 cut(s) 251
HspAI GCGC 1 cut(s) 351
Kzo9I GATC 1 cut(s) 1496
LmnI GCTCC 8 cut(s) 201, 228, 534, 715, 1112, 1140, 1225, 1302
Lsp1109I GCAGC 2 cut(s) 661, 775
LweI GCATC 4 cut(s) 553, 1330, 1365, 1442
MabI ACCWGGT 1 cut(s) 1081
MaeI CTAG 4 cut(s) 492, 513, 882, 1503
MaeII ACGT 1 cut(s) 251
MaeIII GTNAC 8 cut(s) 603, 796, 1177, 1190, 1345, 1375, 1415, 1440
MalI GATC 1 cut(s) 1498
MboI GATC 1 cut(s) 1496
MboII GAAGA 2 cut(s) 1246, 1270
MfeI CAATTG 3 cut(s) 261, 825, 956
MhlI GDGCHC 3 cut(s) 225, 442, 970
MlsI TGGCCA 1 cut(s) 419
MluCI AATT 8 cut(s) 261, 479, 502, 825, 956, 977, 1098, 1265
MluNI TGGCCA 1 cut(s) 419
MlyI GAGTC 3 cut(s) 161, 696, 943
MmeI TCCRAC 1 cut(s) 177
Mox20I TGGCCA 1 cut(s) 419
Mph1103I ATGCAT 1 cut(s) 1203
MroXI GAANNNNTTC 1 cut(s) 981
MscI TGGCCA 1 cut(s) 419
MseI TTAA 4 cut(s) 119, 372, 1011, 1065
MslI CAYNNNNRTG 1 cut(s) 1013
Msp20I TGGCCA 1 cut(s) 419
MspA1I CMGCKG 1 cut(s) 128
MspI CCGG 3 cut(s) 200, 215, 226
MspR9I CCNGG 8 cut(s) 200, 215, 245, 283, 1083, 1105, 1163, 1311
MunI CAATTG 3 cut(s) 261, 825, 956
Mva1269I GAATGC 1 cut(s) 854
MvaI CCWGG 6 cut(s) 245, 283, 1083, 1105, 1163, 1311
MvnI CGCG 1 cut(s) 543
MwoI GCNNNNNNNGC 5 cut(s) 20, 278, 357, 724, 1132
NciI CCSGG 2 cut(s) 200, 215
NdeI CATATG 1 cut(s) 865
NdeII GATC 1 cut(s) 1496
NlaIV GGNNCC 4 cut(s) 439, 440, 1032, 1221
NmuCI GTSAC 4 cut(s) 1190, 1375, 1415, 1440
NsiI ATGCAT 1 cut(s) 1203
NspI RCATGY 2 cut(s) 931, 1126
PagI TCATGA 2 cut(s) 816, 844
PceI AGGCCT 2 cut(s) 326, 875
PctI GAATGC 1 cut(s) 854
PdmI GAANNNNTTC 1 cut(s) 981
PfeI GAWTC 7 cut(s) 640, 700, 777, 890, 1060, 1250, 1511
PfoI TCCNGGA 1 cut(s) 1309
PkrI GCNGC 7 cut(s) 16, 19, 22, 288, 313, 676, 790
PleI GAGTC 3 cut(s) 161, 695, 943
PpsI GAGTC 3 cut(s) 161, 695, 943
PshBI ATTAAT 1 cut(s) 119
Psp124BI GAGCTC 1 cut(s) 225
Psp6I CCWGG 6 cut(s) 243, 281, 1081, 1103, 1161, 1309
PspFI CCCAGC 2 cut(s) 301, 791
PspGI CCWGG 6 cut(s) 243, 281, 1081, 1103, 1161, 1309
PspN4I GGNNCC 4 cut(s) 439, 440, 1032, 1221
PspOMI GGGCCC 1 cut(s) 438
PspPI GGNCC 6 cut(s) 159, 187, 228, 438, 439, 1030
PsrI GAACNNNNNNTAC 2 cut(s) 1385, 1417
RsaI GTAC 3 cut(s) 64, 634, 740
RsaNI GTAC 3 cut(s) 63, 633, 739
RseI CAYNNNNRTG 1 cut(s) 1013
Rsr2I CGGWCCG 1 cut(s) 228
RsrII CGGWCCG 1 cut(s) 228
SacI GAGCTC 1 cut(s) 225
SaqAI TTAA 4 cut(s) 119, 372, 1011, 1065
SatI GCNGC 7 cut(s) 15, 18, 21, 287, 312, 675, 789
Sau3AI GATC 1 cut(s) 1496
Sau96I GGNCC 6 cut(s) 159, 187, 228, 438, 439, 1030
SchI GAGTC 3 cut(s) 161, 696, 943
ScrFI CCNGG 8 cut(s) 200, 215, 245, 283, 1083, 1105, 1163, 1311
SduI GDGCHC 3 cut(s) 225, 442, 970
SexAI ACCWGGT 1 cut(s) 1081
SfaNI GCATC 4 cut(s) 553, 1330, 1365, 1442
SinI GGWCC 2 cut(s) 228, 1030
SmiMI CAYNNNNRTG 1 cut(s) 1013
SmlI CTYRAG 1 cut(s) 1445
SmoI CTYRAG 1 cut(s) 1445
Sse9I AATT 8 cut(s) 261, 479, 502, 825, 956, 977, 1098, 1265
SseBI AGGCCT 2 cut(s) 326, 875
SspI AATATT 1 cut(s) 385
SspMI CTAG 4 cut(s) 492, 513, 882, 1503
SstI GAGCTC 1 cut(s) 225
StuI AGGCCT 2 cut(s) 326, 875
StyD4I CCNGG 8 cut(s) 198, 213, 243, 281, 1081, 1103, 1161, 1309
StyI CCWWGG 1 cut(s) 491
TaaI ACNGT 2 cut(s) 1375, 1381
TaiI ACGT 1 cut(s) 254
TaqI TCGA 2 cut(s) 952, 1281
TasI AATT 8 cut(s) 261, 479, 502, 825, 956, 977, 1098, 1265
TauI GCSGC 5 cut(s) 17, 20, 23, 289, 314
TfiI GAWTC 7 cut(s) 640, 700, 777, 890, 1060, 1250, 1511
Tru1I TTAA 4 cut(s) 119, 372, 1011, 1065
Tru9I TTAA 4 cut(s) 119, 372, 1011, 1065
TscAI CASTG 5 cut(s) 642, 667, 1195, 1534, 1542
TseFI GTSAC 4 cut(s) 1190, 1375, 1415, 1440
TseI GCWGC 2 cut(s) 674, 788
Tsp45I GTSAC 4 cut(s) 1190, 1375, 1415, 1440
TspDTI ATGAA 3 cut(s) 780, 833, 861
TspGWI ACGGA 2 cut(s) 220, 1212
TspRI CASTG 5 cut(s) 642, 667, 1195, 1534, 1542
VneI GTGCAC 1 cut(s) 966
VpaK11BI GGWCC 2 cut(s) 228, 1030
VspI ATTAAT 1 cut(s) 119
XagI CCTNNNNNAGG 1 cut(s) 880
XapI RAATTY 1 cut(s) 977
XceI RCATGY 2 cut(s) 931, 1126
XmaJI CCTAGG 1 cut(s) 491
XmiI GTMKAC 1 cut(s) 1087
XmnI GAANNNNTTC 1 cut(s) 981
XspI CTAG 4 cut(s) 492, 513, 882, 1503
Zsp2I ATGCAT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.