Rmu_sc0000076.1_g000051

Phospho-2-dehydro-3-deoxyheptonate aldolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000076.1
OG0012776
Physical Location & Seq
Forward (+)
228883 .. 232517
3635 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000076.1_g000051.1.cds

Sequence Viewer

Length: 1779 bp
atgaccacagtatctcaaaacgacgtcgtctcctctagccacctcgtcacgcgcgtcgcaagtaacatcggtgcgggtacgttacccataaaaacagactcagaaggattagatccttcttcaaatccattcttctcctatccatcatcatcacattctgacactctcctgcaacacaaatatctccagtcagatatgtctctgacagccacagccgccgcctcagcagcaggctctgctaatctcaccaccccaaaccccttcctctcccgtaccaccaccccaaaacccacgacccatttcaaactcttcactctccccaaaaaccccaaacgcacaatttccgccgtctcctcctccccttccgcaatttcctccaccgccgggccctccgactgggccgtggactcatggaaatccaggacggcccatcagctcccggtttaccctgacccggacgagctccgcaccgtgttgaccaccctcgagaccttcccgccaattgtgtttgccggagaggcgaggaggctggagaccttgctcggcaaggcggctcaaggcgaggcctttttgcttcagggaggtgattgcgccgagagtttcaaggagtttaatgctaataatattagggataccttcagagtcttcttgcagatggccatcactctcatctatggggcccaaatgcctgtcatcaaggttgggagaatggcaggccaattcgcaaagcctaggtctgataattttgagactagagatggtgtgaagctcccaagttatcggggagacaatatcaatggtgatgcttttgatgagaaatctagaataccagacccacaaaggttactgagagcatacctccaatctgttggcacactgaatctccttagagcatttgccactggtggttatgctgcaatgcagagagtctcagattggaatcttgacttcgtagagcatagcgagcaagcgaacaggtacatggaacttgcacagcgagtggatgaagctattggattccttagtgctgctggggttactggtgacaatccaatcatgaatacaattgagttttggatatctcatgaatgcctccatttaccatatgagcaggcgttgactagggaggattccacaactggccgttattatgattgttctgcccacatgctttgggtaggggagaggactcgacaattggatggggcacatgttgaattccttcgtggtgtatccaatcctcttggcattaaggtgagtgataagatggacccaaatgagcttgtgaaactgtgtgagattcttaaccctcacaacagacctggtaggctgacaataattaccaggatgggagcagataatatgcggataaagctcccccacttgatcagagctgtgcgccaggcagggcttattgttacatgggtcagtgatcccatgcatgggaacaccataaaggctccatgtgggctcaagacacggccatttgatgcaatcagggctgaattgagagccttctttgacgtccatgaccaagaagggagctatcctggaggagtgcatctggagatgactgggcagaatgtgacagagtgcgttggagggtcaaagactgtaaccttcagtgacttgaactcccgttatcacacacattgtgaccccagactgaatgcatcgcagtcgcttgagttggcctttttaatatcagataggctgaggaaagacaggttaaaatcatctaggactgattatcagatgaatggcagtgctcaagcgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00400 ko01100 ko01110 ko01130 ko01230 ko02024 map00400 map01100 map01110 map01130 map01230 map02024
Pfam Domains
Protein Families
DAHP_synth_2

Protein Analysis

592

Amino Acids

65.31

Weight (kDa)

7.0

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012776)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G33510
fragaria_vesca FvH4_5g20460
malus_domestica MD04G1055100.v1.1 MD05G1042700.v1.1
prunus_persica Prupe.5G055000_v2.0.a1 Prupe.8G064200_v2.0.a1
pyrus_communis pycom05g03530
rosa_chinensis RchiOBHm_Chr7g0205781
rosa_laevigata RLG00000003355
rosa_multiflora Rmu_co8369421.1_g000001 Rmu_sc0000076.1_g000051 Rmu_sc0008518.1_g000012
rosa_roxburghii Rroxscaffold_3G00251990
rosa_rugosa Rorug07G0093000
rosa_samantha Rh7AG224500 Rh7CG238100 Rh7DG231200
rosa_wichuraiana Rw7G019360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 27, 1527
AccII CGCG 2 cut(s) 52, 54
AclWI GGATC 2 cut(s) 107, 1427
AcoI YGGCCR 3 cut(s) 657, 1141, 1481
AcsI RAATTY 1 cut(s) 1217
AcuI CTGAAG 3 cut(s) 560, 622, 1606
AcyI GRCGYC 2 cut(s) 24, 1524
AdeI CACNNNGTG 1 cut(s) 1655
AfaI GTAC 3 cut(s) 79, 274, 980
AfiI CCNNNNNNNGG 5 cut(s) 384, 396, 454, 1442, 1443
AflIII ACRYGT 1 cut(s) 1210
AgsI TTSAA 5 cut(s) 123, 304, 604, 1217, 1633
AjnI CCWGG 5 cut(s) 419, 1321, 1343, 1401, 1549
AluBI AGCT 8 cut(s) 436, 463, 769, 1010, 1282, 1375, 1394, 1545
AluI AGCT 8 cut(s) 436, 463, 769, 1010, 1282, 1375, 1394, 1545
Alw21I GWGCWC 2 cut(s) 465, 1771
Alw26I GTCTC 8 cut(s) 34, 204, 355, 482, 527, 743, 780, 934
AlwI GGATC 2 cut(s) 107, 1427
AlwNI CAGNNNCTG 1 cut(s) 236
Ama87I CYCGRG 1 cut(s) 485
ApaI GGGCCC 2 cut(s) 390, 682
ApeKI GCWGC 3 cut(s) 227, 914, 1028
ApoI RAATTY 1 cut(s) 1217
ArsI GACNNNNNNTTYG 2 cut(s) 719, 751
Asp700I GAANNNNTTC 1 cut(s) 1221
AspA2I CCTAGG 1 cut(s) 731
AspLEI GCGC 3 cut(s) 54, 593, 1401
AspS9I GGNCC 7 cut(s) 386, 387, 399, 427, 678, 679, 1270
AsuC2I CCSGG 3 cut(s) 385, 440, 455
AsuHPI GGTGA 5 cut(s) 238, 596, 812, 1055, 1267
AvaI CYCGRG 1 cut(s) 485
AvaII GGWCC 1 cut(s) 1270
AvrII CCTAGG 1 cut(s) 731
BaeGI GKGCMC 3 cut(s) 390, 682, 1210
BaeI ACNNNNGTAYC 1 cut(s) 27
BalI TGGCCA 1 cut(s) 659
BanII GRGCYC 4 cut(s) 390, 465, 682, 1473
BbsI GAAGAC 1 cut(s) 637
Bbv12I GWGCWC 2 cut(s) 465, 1771
BbvCI CCTCAGC 2 cut(s) 223, 1715
BbvI GCAGC 3 cut(s) 239, 901, 1015
BccI CCATC 8 cut(s) 151, 438, 649, 668, 752, 1196, 1261, 1342
BceAI ACGGC 5 cut(s) 332, 386, 441, 1128, 1496
BcgI CGANNNNNNTGC 2 cut(s) 1662, 1696
BciT130I CCWGG 5 cut(s) 421, 1323, 1345, 1403, 1551
BciVI GTATCC 2 cut(s) 625, 1243
BclI TGATCA 1 cut(s) 1386
BcnI CCSGG 3 cut(s) 385, 440, 455
BcoDI GTCTC 8 cut(s) 34, 204, 355, 482, 527, 743, 780, 934
BfaI CTAG 6 cut(s) 36, 732, 753, 822, 1122, 1740
BfuI GTATCC 2 cut(s) 625, 1243
BglI GCCNNNNNGGC 1 cut(s) 518
BisI GCNGC 6 cut(s) 216, 219, 228, 552, 915, 1029
BlnI CCTAGG 1 cut(s) 731
BlsI GCNGC 6 cut(s) 217, 220, 229, 553, 916, 1030
Bme1390I CCNGG 8 cut(s) 385, 421, 440, 455, 1323, 1345, 1403, 1551
Bme18I GGWCC 1 cut(s) 1270
BmeT110I CYCGRG 1 cut(s) 485
BmgT120I GGNCC 7 cut(s) 386, 387, 399, 427, 678, 679, 1270
BmiI GGNNCC 5 cut(s) 388, 679, 680, 1272, 1461
BmrFI CCNGG 8 cut(s) 385, 421, 440, 455, 1323, 1345, 1403, 1551
BmrI ACTGGG 2 cut(s) 406, 1584
BmsI GCATC 4 cut(s) 793, 1480, 1570, 1682
BmuI ACTGGG 2 cut(s) 406, 1584
BpiI GAAGAC 1 cut(s) 637
BplI GAGNNNNNCTC 2 cut(s) 843, 875
BpmI CTGGAG 4 cut(s) 170, 551, 1572, 1586
Bpu10I CCTNAGC 2 cut(s) 223, 1715
BpuEI CTTGAG 4 cut(s) 540, 1457, 1706, 1755
BpuMI CCSGG 3 cut(s) 385, 440, 455
BsaBI GATNNNNATC 2 cut(s) 659, 939
BsaHI GRCGYC 2 cut(s) 24, 1524
BsaI GGTCTC 2 cut(s) 482, 527
BsaJI CCNNGG 2 cut(s) 402, 731
BsaXI ACNNNNNCTCC 6 cut(s) 14, 44, 867, 897, 1619, 1649
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 396, 454, 1442, 1443
Bse1I ACTGG 6 cut(s) 187, 401, 907, 1045, 1144, 1579
Bse3DI GCAATG 1 cut(s) 924
Bse8I GATNNNNATC 2 cut(s) 659, 939
BseBI CCWGG 5 cut(s) 421, 1323, 1345, 1403, 1551
BseDI CCNNGG 2 cut(s) 402, 731
BseGI GGATG 3 cut(s) 1009, 1207, 1353
BseJI GATNNNNATC 2 cut(s) 659, 939
BseLI CCNNNNNNNGG 5 cut(s) 384, 396, 454, 1442, 1443
BseMI GCAATG 1 cut(s) 924
BseMII CTCAG 5 cut(s) 114, 237, 839, 945, 1706
BseNI ACTGG 6 cut(s) 187, 401, 907, 1045, 1144, 1579
BseRI GAGGAG 5 cut(s) 22, 343, 346, 538, 1569
BseSI GKGCMC 3 cut(s) 390, 682, 1210
BseXI GCAGC 3 cut(s) 239, 901, 1015
BseYI CCCAGC 1 cut(s) 1031
Bsh1236I CGCG 2 cut(s) 52, 54
BsiHKAI GWGCWC 2 cut(s) 465, 1771
BsiHKCI CYCGRG 1 cut(s) 485
BsiSI CCGG 4 cut(s) 384, 440, 455, 513
BslI CCNNNNNNNGG 5 cut(s) 384, 396, 454, 1442, 1443
BsmAI GTCTC 8 cut(s) 34, 204, 355, 482, 527, 743, 780, 934
BsmBI CGTCTC 2 cut(s) 34, 355
BsmI GAATGC 2 cut(s) 1094, 1675
Bso31I GGTCTC 2 cut(s) 482, 527
BsoBI CYCGRG 1 cut(s) 485
Bsp120I GGGCCC 2 cut(s) 386, 678
Bsp1286I GDGCHC 6 cut(s) 390, 465, 682, 1210, 1473, 1771
Bsp143I GATC 3 cut(s) 112, 1386, 1432
BspCNI CTCAG 5 cut(s) 113, 236, 840, 944, 1707
BspFNI CGCG 2 cut(s) 52, 54
BspHI TCATGA 2 cut(s) 1056, 1084
BspLI GGNNCC 5 cut(s) 388, 679, 680, 1272, 1461
BspPI GGATC 2 cut(s) 107, 1427
BspTNI GGTCTC 2 cut(s) 482, 527
BsrDI GCAATG 1 cut(s) 924
BsrI ACTGG 6 cut(s) 187, 401, 907, 1045, 1144, 1579
BssECI CCNNGG 2 cut(s) 402, 731
BssMI GATC 3 cut(s) 112, 1386, 1432
BssNI GRCGYC 2 cut(s) 24, 1524
BssT1I CCWWGG 1 cut(s) 731
Bst2UI CCWGG 5 cut(s) 421, 1323, 1345, 1403, 1551
Bst4CI ACNGT 4 cut(s) 10, 472, 1293, 1615
Bst6I CTCTTC 1 cut(s) 314
BstACI GRCGYC 2 cut(s) 24, 1524
BstAPI GCANNNNNTGC 1 cut(s) 236
BstC8I GCNNGC 5 cut(s) 232, 715, 965, 969, 1113
BstDEI CTNAG 7 cut(s) 100, 223, 848, 887, 931, 1022, 1715
BstDSI CCRYGG 1 cut(s) 402
BstF5I GGATG 3 cut(s) 1009, 1207, 1353
BstFNI CGCG 2 cut(s) 52, 54
BstHHI GCGC 3 cut(s) 54, 593, 1401
BstKTI GATC 3 cut(s) 115, 1389, 1435
BstMAI GTCTC 8 cut(s) 34, 204, 355, 482, 527, 743, 780, 934
BstMBI GATC 3 cut(s) 112, 1386, 1432
BstMWI GCNNNNNNNGC 8 cut(s) 215, 224, 227, 236, 518, 964, 1372, 1499
BstNI CCWGG 5 cut(s) 421, 1323, 1345, 1403, 1551
BstNSI RCATGY 2 cut(s) 1171, 1214
BstSCI CCNGG 8 cut(s) 383, 419, 438, 453, 1321, 1343, 1401, 1549
BstSLI GKGCMC 3 cut(s) 390, 682, 1210
BstUI CGCG 2 cut(s) 52, 54
BstV1I GCAGC 3 cut(s) 239, 901, 1015
BstV2I GAAGAC 1 cut(s) 637
BstX2I RGATCY 1 cut(s) 112
BstXI CCANNNNNNTGG 1 cut(s) 869
BstYI RGATCY 1 cut(s) 112
BsuI GTATCC 2 cut(s) 625, 1243
BtgI CCRYGG 1 cut(s) 402
BtgZI GCGATG 1 cut(s) 1659
BtsCI GGATG 3 cut(s) 1009, 1207, 1353
BtsI GCAGTG 1 cut(s) 1771
BtsIMutI CAGTG 5 cut(s) 875, 900, 1435, 1630, 1771
Cac8I GCNNGC 5 cut(s) 232, 715, 965, 969, 1113
CaiI CAGNNNCTG 1 cut(s) 236
CciI TCATGA 2 cut(s) 1056, 1084
CfoI GCGC 3 cut(s) 54, 593, 1401
Cfr13I GGNCC 7 cut(s) 386, 387, 399, 427, 678, 679, 1270
CseI GACGC 1 cut(s) 43
CsiI ACCWGGT 1 cut(s) 1321
Csp6I GTAC 3 cut(s) 78, 273, 979
CspCI CAANNNNNGTGG 2 cut(s) 1154, 1189
CviQI GTAC 3 cut(s) 78, 273, 979
DdeI CTNAG 7 cut(s) 100, 223, 848, 887, 931, 1022, 1715
DpnI GATC 3 cut(s) 114, 1388, 1434
DpnII GATC 3 cut(s) 112, 1386, 1432
DraIII CACNNNGTG 1 cut(s) 1655
EaeI YGGCCR 3 cut(s) 657, 1141, 1481
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
EciI GGCGGA 1 cut(s) 334
Ecl136II GAGCTC 1 cut(s) 463
Eco130I CCWWGG 1 cut(s) 731
Eco147I AGGCCT 1 cut(s) 566
Eco24I GRGCYC 4 cut(s) 390, 465, 682, 1473
Eco31I GGTCTC 2 cut(s) 482, 527
Eco32I GATATC 1 cut(s) 1080
Eco47I GGWCC 1 cut(s) 1270
Eco53kI GAGCTC 1 cut(s) 463
Eco57I CTGAAG 3 cut(s) 560, 622, 1606
Eco88I CYCGRG 1 cut(s) 485
EcoICRI GAGCTC 1 cut(s) 463
EcoO109I RGGNCCY 2 cut(s) 387, 678
EcoRI GAATTC 1 cut(s) 1217
EcoRII CCWGG 5 cut(s) 419, 1321, 1343, 1401, 1549
EcoRV GATATC 1 cut(s) 1080
EcoT14I CCWWGG 1 cut(s) 731
EcoT22I ATGCAT 2 cut(s) 1443, 1675
EcoT38I GRGCYC 4 cut(s) 390, 465, 682, 1473
ErhI CCWWGG 1 cut(s) 731
Esp3I CGTCTC 2 cut(s) 34, 355
FauI CCCGC 2 cut(s) 67, 504
FauNDI CATATG 1 cut(s) 1105
FbaI TGATCA 1 cut(s) 1386
Fnu4HI GCNGC 6 cut(s) 216, 219, 228, 552, 915, 1029
FokI GGATG 3 cut(s) 1016, 1214, 1360
FriOI GRGCYC 4 cut(s) 390, 465, 682, 1473
Fsp4HI GCNGC 6 cut(s) 216, 219, 228, 552, 915, 1029
FspBI CTAG 6 cut(s) 36, 732, 753, 822, 1122, 1740
GlaI GCGC 3 cut(s) 53, 592, 1400
GluI GCNGC 6 cut(s) 216, 219, 228, 552, 915, 1029
GsaI CCCAGC 1 cut(s) 1035
GsuI CTGGAG 4 cut(s) 170, 551, 1572, 1586
HapII CCGG 4 cut(s) 384, 440, 455, 513
HgaI GACGC 1 cut(s) 43
HhaI GCGC 3 cut(s) 54, 593, 1401
Hin1I GRCGYC 2 cut(s) 24, 1524
Hin6I GCGC 3 cut(s) 52, 591, 1399
HinP1I GCGC 3 cut(s) 52, 591, 1399
HincII GTYRAC 2 cut(s) 477, 1119
HindII GTYRAC 2 cut(s) 477, 1119
HpaII CCGG 4 cut(s) 384, 440, 455, 513
HphI GGTGA 5 cut(s) 238, 596, 812, 1055, 1267
Hpy166II GTNNAC 4 cut(s) 406, 445, 477, 1119
Hpy188III TCNNGA 7 cut(s) 487, 822, 944, 1057, 1085, 1474, 1565
Hpy8I GTNNAC 4 cut(s) 406, 445, 477, 1119
Hpy99I CGWCG 3 cut(s) 26, 29, 59
HpyCH4III ACNGT 4 cut(s) 10, 472, 1293, 1615
HpyCH4IV ACGT 3 cut(s) 24, 80, 1524
HpyCH4V TGCA 9 cut(s) 172, 652, 917, 922, 992, 1441, 1493, 1561, 1673
HpyF10VI GCNNNNNNNGC 8 cut(s) 215, 224, 227, 236, 518, 964, 1372, 1499
HpyF3I CTNAG 7 cut(s) 100, 223, 848, 887, 931, 1022, 1715
HpySE526I ACGT 3 cut(s) 24, 80, 1524
Hsp92I GRCGYC 2 cut(s) 24, 1524
HspAI GCGC 3 cut(s) 52, 591, 1399
Ksp22I TGATCA 1 cut(s) 1386
Kzo9I GATC 3 cut(s) 112, 1386, 1432
LmnI GCTCC 7 cut(s) 441, 468, 774, 1352, 1380, 1465, 1542
Lsp1109I GCAGC 3 cut(s) 239, 901, 1015
LweI GCATC 4 cut(s) 793, 1480, 1570, 1682
MabI ACCWGGT 1 cut(s) 1321
MaeI CTAG 6 cut(s) 36, 732, 753, 822, 1122, 1740
MaeII ACGT 3 cut(s) 24, 80, 1524
MalI GATC 3 cut(s) 114, 1388, 1434
MboI GATC 3 cut(s) 112, 1386, 1432
MboII GAAGA 4 cut(s) 111, 124, 301, 637
MfeI CAATTG 3 cut(s) 501, 1065, 1196
MflI RGATCY 1 cut(s) 112
MhlI GDGCHC 6 cut(s) 390, 465, 682, 1210, 1473, 1771
MlsI TGGCCA 1 cut(s) 659
MluNI TGGCCA 1 cut(s) 659
MlyI GAGTC 5 cut(s) 92, 401, 651, 936, 1183
MmeI TCCRAC 2 cut(s) 417, 1579
Mox20I TGGCCA 1 cut(s) 659
Mph1103I ATGCAT 2 cut(s) 1443, 1675
MroXI GAANNNNTTC 1 cut(s) 1221
MscI TGGCCA 1 cut(s) 659
MseI TTAA 5 cut(s) 612, 1251, 1305, 1700, 1730
MslI CAYNNNNRTG 1 cut(s) 1253
Msp20I TGGCCA 1 cut(s) 659
MspI CCGG 4 cut(s) 384, 440, 455, 513
MspR9I CCNGG 8 cut(s) 385, 421, 440, 455, 1323, 1345, 1403, 1551
MunI CAATTG 3 cut(s) 501, 1065, 1196
Mva1269I GAATGC 2 cut(s) 1094, 1675
MvaI CCWGG 5 cut(s) 421, 1323, 1345, 1403, 1551
MvnI CGCG 2 cut(s) 52, 54
MwoI GCNNNNNNNGC 8 cut(s) 215, 224, 227, 236, 518, 964, 1372, 1499
NciI CCSGG 3 cut(s) 385, 440, 455
NdeI CATATG 1 cut(s) 1105
NdeII GATC 3 cut(s) 112, 1386, 1432
NlaIV GGNNCC 5 cut(s) 388, 679, 680, 1272, 1461
NmeAIII GCCGAG 2 cut(s) 522, 619
NmuCI GTSAC 5 cut(s) 46, 1043, 1585, 1625, 1655
NsiI ATGCAT 2 cut(s) 1443, 1675
NspI RCATGY 2 cut(s) 1171, 1214
PaeR7I CTCGAG 1 cut(s) 485
PagI TCATGA 2 cut(s) 1056, 1084
PceI AGGCCT 1 cut(s) 566
PciI ACATGT 1 cut(s) 1210
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 2 cut(s) 1094, 1675
PdmI GAANNNNTTC 1 cut(s) 1221
PfeI GAWTC 5 cut(s) 880, 940, 1017, 1130, 1300
PflFI GACNNNGTC 1 cut(s) 26
PfoI TCCNGGA 2 cut(s) 419, 1549
PkrI GCNGC 6 cut(s) 217, 220, 229, 553, 916, 1030
PleI GAGTC 5 cut(s) 92, 401, 650, 935, 1183
PpsI GAGTC 5 cut(s) 92, 401, 650, 935, 1183
PscI ACATGT 1 cut(s) 1210
Psp124BI GAGCTC 1 cut(s) 465
Psp6I CCWGG 5 cut(s) 419, 1321, 1343, 1401, 1549
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 5 cut(s) 419, 1321, 1343, 1401, 1549
PspN4I GGNNCC 5 cut(s) 388, 679, 680, 1272, 1461
PspOMI GGGCCC 2 cut(s) 386, 678
PspPI GGNCC 7 cut(s) 386, 387, 399, 427, 678, 679, 1270
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 112
PsyI GACNNNGTC 1 cut(s) 26
RsaI GTAC 3 cut(s) 79, 274, 980
RsaNI GTAC 3 cut(s) 78, 273, 979
RseI CAYNNNNRTG 1 cut(s) 1253
SacI GAGCTC 1 cut(s) 465
SaqAI TTAA 5 cut(s) 612, 1251, 1305, 1700, 1730
SatI GCNGC 6 cut(s) 216, 219, 228, 552, 915, 1029
Sau3AI GATC 3 cut(s) 112, 1386, 1432
Sau96I GGNCC 7 cut(s) 386, 387, 399, 427, 678, 679, 1270
SchI GAGTC 5 cut(s) 92, 401, 651, 936, 1183
ScrFI CCNGG 8 cut(s) 385, 421, 440, 455, 1323, 1345, 1403, 1551
SduI GDGCHC 6 cut(s) 390, 465, 682, 1210, 1473, 1771
SexAI ACCWGGT 1 cut(s) 1321
SfaNI GCATC 4 cut(s) 793, 1480, 1570, 1682
Sfr274I CTCGAG 1 cut(s) 485
SinI GGWCC 1 cut(s) 1270
SlaI CTCGAG 1 cut(s) 485
SmiMI CAYNNNNRTG 1 cut(s) 1253
SmlI CTYRAG 5 cut(s) 485, 555, 1472, 1685, 1770
SmoI CTYRAG 5 cut(s) 485, 555, 1472, 1685, 1770
SseBI AGGCCT 1 cut(s) 566
SspI AATATT 1 cut(s) 625
SspMI CTAG 6 cut(s) 36, 732, 753, 822, 1122, 1740
SstI GAGCTC 1 cut(s) 465
StuI AGGCCT 1 cut(s) 566
StyD4I CCNGG 8 cut(s) 383, 419, 438, 453, 1321, 1343, 1401, 1549
StyI CCWWGG 1 cut(s) 731
TaaI ACNGT 4 cut(s) 10, 472, 1293, 1615
TaiI ACGT 3 cut(s) 27, 83, 1527
TaqI TCGA 2 cut(s) 486, 1192
TauI GCSGC 3 cut(s) 218, 221, 554
TfiI GAWTC 5 cut(s) 880, 940, 1017, 1130, 1300
Tru1I TTAA 5 cut(s) 612, 1251, 1305, 1700, 1730
Tru9I TTAA 5 cut(s) 612, 1251, 1305, 1700, 1730
TscAI CASTG 5 cut(s) 882, 907, 1435, 1630, 1771
TseFI GTSAC 5 cut(s) 46, 1043, 1585, 1625, 1655
TseI GCWGC 3 cut(s) 227, 914, 1028
Tsp45I GTSAC 5 cut(s) 46, 1043, 1585, 1625, 1655
TspDTI ATGAA 4 cut(s) 1020, 1073, 1101, 1772
TspRI CASTG 5 cut(s) 882, 907, 1435, 1630, 1771
Tth111I GACNNNGTC 1 cut(s) 26
VpaK11BI GGWCC 1 cut(s) 1270
XapI RAATTY 1 cut(s) 1217
XbaI TCTAGA 1 cut(s) 821
XceI RCATGY 2 cut(s) 1171, 1214
XhoI CTCGAG 1 cut(s) 485
XmaJI CCTAGG 1 cut(s) 731
XmnI GAANNNNTTC 1 cut(s) 1221
XspI CTAG 6 cut(s) 36, 732, 753, 822, 1122, 1740
ZraI GACGTC 2 cut(s) 25, 1525
Zsp2I ATGCAT 2 cut(s) 1443, 1675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.