Phospho-2-dehydro-3-deoxyheptonate aldolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33510 |
| fragaria_vesca | FvH4_5g20460 |
| malus_domestica | MD04G1055100.v1.1 MD05G1042700.v1.1 |
| prunus_persica | Prupe.5G055000_v2.0.a1 Prupe.8G064200_v2.0.a1 |
| pyrus_communis | pycom05g03530 |
| rosa_chinensis | RchiOBHm_Chr7g0205781 |
| rosa_laevigata | RLG00000003355 |
| rosa_multiflora | Rmu_co8369421.1_g000001 Rmu_sc0000076.1_g000051 Rmu_sc0008518.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00251990 |
| rosa_rugosa | Rorug07G0093000 |
| rosa_samantha | Rh7AG224500 Rh7CG238100 Rh7DG231200 |
| rosa_wichuraiana | Rw7G019360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1359 |
| AccB1I | GGYRCC | 1 cut(s) | 509 |
| AccII | CGCG | 2 cut(s) | 355, 638 |
| AciI | CCGC | 7 cut(s) | 132, 198, 355, 358, 384, 1211, 1452 |
| AclWI | GGATC | 4 cut(s) | 1097, 1110, 1259, 1484 |
| AcoI | YGGCCR | 1 cut(s) | 489 |
| AcsI | RAATTY | 2 cut(s) | 1049, 1131 |
| AcuI | CTGAAG | 2 cut(s) | 454, 1325 |
| AcyI | GRCGYC | 1 cut(s) | 1356 |
| AdeI | CACNNNGTG | 1 cut(s) | 1487 |
| AfaI | GTAC | 3 cut(s) | 67, 812, 938 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 738, 1274, 1275 |
| AflIII | ACRYGT | 2 cut(s) | 636, 1042 |
| AgsI | TTSAA | 4 cut(s) | 436, 445, 966, 1049 |
| AjiI | CACGTC | 1 cut(s) | 369 |
| AjnI | CCWGG | 3 cut(s) | 1153, 1175, 1493 |
| Alw21I | GWGCWC | 2 cut(s) | 297, 1042 |
| Alw26I | GTCTC | 4 cut(s) | 314, 359, 411, 456 |
| AlwI | GGATC | 4 cut(s) | 1097, 1110, 1259, 1484 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| ApeKI | GCWGC | 5 cut(s) | 268, 406, 746, 860, 1601 |
| ApoI | RAATTY | 2 cut(s) | 1049, 1131 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 551, 583 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 924, 1053 |
| AspA2I | CCTAGG | 1 cut(s) | 563 |
| AspLEI | GCGC | 2 cut(s) | 355, 425 |
| AspS9I | GGNCC | 4 cut(s) | 218, 231, 259, 283 |
| AsuC2I | CCSGG | 2 cut(s) | 281, 1383 |
| AsuHPI | GGTGA | 5 cut(s) | 31, 67, 200, 644, 1099 |
| AvaII | GGWCC | 1 cut(s) | 283 |
| AvrII | CCTAGG | 1 cut(s) | 563 |
| BaeGI | GKGCMC | 1 cut(s) | 514 |
| BalI | TGGCCA | 1 cut(s) | 491 |
| BamHI | GGATCC | 1 cut(s) | 1102 |
| BanI | GGYRCC | 1 cut(s) | 509 |
| BanII | GRGCYC | 1 cut(s) | 297 |
| BauI | CACGAG | 1 cut(s) | 241 |
| BbsI | GAAGAC | 3 cut(s) | 469, 1313, 1448 |
| Bbv12I | GWGCWC | 2 cut(s) | 297, 1042 |
| BbvI | GCAGC | 5 cut(s) | 255, 393, 733, 847, 1588 |
| BccI | CCATC | 9 cut(s) | 80, 146, 270, 481, 500, 584, 1028, 1093, 1174 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 974, 1008 |
| BciT130I | CCWGG | 3 cut(s) | 1155, 1177, 1495 |
| BciVI | GTATCC | 1 cut(s) | 1075 |
| BclI | TGATCA | 1 cut(s) | 1218 |
| BcnI | CCSGG | 2 cut(s) | 281, 1383 |
| BcoDI | GTCTC | 4 cut(s) | 314, 359, 411, 456 |
| BfaI | CTAG | 2 cut(s) | 564, 954 |
| BfmI | CTRYAG | 2 cut(s) | 407, 861 |
| BfuI | GTATCC | 1 cut(s) | 1075 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 350, 1159 |
| BglII | AGATCT | 1 cut(s) | 1565 |
| BisI | GCNGC | 8 cut(s) | 269, 356, 359, 384, 407, 747, 861, 1602 |
| BlnI | CCTAGG | 1 cut(s) | 563 |
| BlsI | GCNGC | 8 cut(s) | 270, 357, 360, 385, 408, 748, 862, 1603 |
| Bme1390I | CCNGG | 5 cut(s) | 281, 1155, 1177, 1383, 1495 |
| Bme18I | GGWCC | 1 cut(s) | 283 |
| BmgBI | CACGTC | 1 cut(s) | 369 |
| BmgT120I | GGNCC | 4 cut(s) | 218, 231, 259, 283 |
| BmiI | GGNNCC | 4 cut(s) | 285, 511, 1104, 1293 |
| BmrFI | CCNGG | 5 cut(s) | 281, 1155, 1177, 1383, 1495 |
| BmrI | ACTGGG | 2 cut(s) | 1416, 1504 |
| BmsI | GCATC | 3 cut(s) | 1312, 1402, 1514 |
| BmuI | ACTGGG | 2 cut(s) | 1416, 1504 |
| BpiI | GAAGAC | 3 cut(s) | 469, 1313, 1448 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 675, 707 |
| BpmI | CTGGAG | 2 cut(s) | 383, 1418 |
| BpuEI | CTTGAG | 3 cut(s) | 83, 207, 1538 |
| BpuMI | CCSGG | 2 cut(s) | 281, 1383 |
| BsaBI | GATNNNNATC | 1 cut(s) | 491 |
| BsaHI | GRCGYC | 1 cut(s) | 1356 |
| BsaJI | CCNNGG | 6 cut(s) | 201, 234, 315, 563, 1106, 1493 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 313, 343, 1029, 1059 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 738, 1274, 1275 |
| Bse1I | ACTGG | 4 cut(s) | 550, 739, 1411, 1510 |
| Bse8I | GATNNNNATC | 1 cut(s) | 491 |
| BseBI | CCWGG | 3 cut(s) | 1155, 1177, 1495 |
| BseDI | CCNNGG | 6 cut(s) | 201, 234, 315, 563, 1106, 1493 |
| BseGI | GGATG | 4 cut(s) | 194, 1039, 1185, 1505 |
| BseJI | GATNNNNATC | 1 cut(s) | 491 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 738, 1274, 1275 |
| BseMII | CTCAG | 2 cut(s) | 417, 694 |
| BseNI | ACTGG | 4 cut(s) | 550, 739, 1411, 1510 |
| BseRI | GAGGAG | 3 cut(s) | 95, 148, 1401 |
| BseSI | GKGCMC | 1 cut(s) | 514 |
| BseXI | GCAGC | 5 cut(s) | 255, 393, 733, 847, 1588 |
| BseYI | CCCAGC | 1 cut(s) | 373 |
| BsgI | GTGCAG | 1 cut(s) | 978 |
| Bsh1236I | CGCG | 2 cut(s) | 355, 638 |
| BshNI | GGYRCC | 1 cut(s) | 509 |
| BsiHKAI | GWGCWC | 2 cut(s) | 297, 1042 |
| BsiSI | CCGG | 3 cut(s) | 281, 345, 1383 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 738, 1274, 1275 |
| BsmAI | GTCTC | 4 cut(s) | 314, 359, 411, 456 |
| BsmBI | CGTCTC | 2 cut(s) | 314, 359 |
| BsmI | GAATGC | 2 cut(s) | 926, 1507 |
| Bsp1286I | GDGCHC | 3 cut(s) | 297, 514, 1042 |
| Bsp143I | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| BspACI | CCGC | 7 cut(s) | 132, 198, 355, 358, 384, 1211, 1452 |
| BspCNI | CTCAG | 2 cut(s) | 418, 693 |
| BspFNI | CGCG | 2 cut(s) | 355, 638 |
| BspHI | TCATGA | 1 cut(s) | 916 |
| BspLI | GGNNCC | 4 cut(s) | 285, 511, 1104, 1293 |
| BspMAI | CTGCAG | 2 cut(s) | 411, 865 |
| BspPI | GGATC | 4 cut(s) | 1097, 1110, 1259, 1484 |
| BspT107I | GGYRCC | 1 cut(s) | 509 |
| BsrI | ACTGG | 4 cut(s) | 550, 739, 1411, 1510 |
| BssECI | CCNNGG | 6 cut(s) | 201, 234, 315, 563, 1106, 1493 |
| BssMI | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| BssNI | GRCGYC | 1 cut(s) | 1356 |
| BssSI | CACGAG | 1 cut(s) | 241 |
| BssT1I | CCWWGG | 4 cut(s) | 234, 315, 563, 1106 |
| Bst2BI | CACGAG | 1 cut(s) | 241 |
| Bst2UI | CCWGG | 3 cut(s) | 1155, 1177, 1495 |
| Bst4CI | ACNGT | 6 cut(s) | 304, 509, 898, 936, 989, 1447 |
| Bst6I | CTCTTC | 2 cut(s) | 166, 172 |
| BstACI | GRCGYC | 1 cut(s) | 1356 |
| BstC8I | GCNNGC | 4 cut(s) | 258, 547, 945, 1524 |
| BstDEI | CTNAG | 4 cut(s) | 426, 680, 719, 1569 |
| BstDSI | CCRYGG | 1 cut(s) | 201 |
| BstEII | GGTNACC | 1 cut(s) | 206 |
| BstF5I | GGATG | 4 cut(s) | 194, 1039, 1185, 1505 |
| BstFNI | CGCG | 2 cut(s) | 355, 638 |
| BstHHI | GCGC | 2 cut(s) | 355, 425 |
| BstKTI | GATC | 6 cut(s) | 1105, 1221, 1267, 1492, 1568, 1587 |
| BstMAI | GTCTC | 4 cut(s) | 314, 359, 411, 456 |
| BstMBI | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 350, 429, 796, 866, 1159, 1331 |
| BstNI | CCWGG | 3 cut(s) | 1155, 1177, 1495 |
| BstNSI | RCATGY | 2 cut(s) | 1003, 1046 |
| BstPI | GGTNACC | 1 cut(s) | 206 |
| BstSCI | CCNGG | 5 cut(s) | 279, 1153, 1175, 1381, 1493 |
| BstSFI | CTRYAG | 2 cut(s) | 407, 861 |
| BstSLI | GKGCMC | 1 cut(s) | 514 |
| BstUI | CGCG | 2 cut(s) | 355, 638 |
| BstV1I | GCAGC | 5 cut(s) | 255, 393, 733, 847, 1588 |
| BstV2I | GAAGAC | 3 cut(s) | 469, 1313, 1448 |
| BstX2I | RGATCY | 2 cut(s) | 1102, 1565 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 701 |
| BstYI | RGATCY | 2 cut(s) | 1102, 1565 |
| BsuI | GTATCC | 1 cut(s) | 1075 |
| BtgI | CCRYGG | 1 cut(s) | 201 |
| BtrI | CACGTC | 1 cut(s) | 369 |
| BtsCI | GGATG | 4 cut(s) | 194, 1039, 1185, 1505 |
| BtsI | GCAGTG | 1 cut(s) | 393 |
| BtsIMutI | CAGTG | 3 cut(s) | 393, 732, 1267 |
| Cac8I | GCNNGC | 4 cut(s) | 258, 547, 945, 1524 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| CciI | TCATGA | 1 cut(s) | 916 |
| CfoI | GCGC | 2 cut(s) | 355, 425 |
| Cfr13I | GGNCC | 4 cut(s) | 218, 231, 259, 283 |
| CseI | GACGC | 2 cut(s) | 644, 1220 |
| Csp6I | GTAC | 3 cut(s) | 66, 811, 937 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 124, 159 |
| CviAII | CATG | 7 cut(s) | 751, 917, 1000, 1043, 1254, 1270, 1361 |
| CviQI | GTAC | 3 cut(s) | 66, 811, 937 |
| DdeI | CTNAG | 4 cut(s) | 426, 680, 719, 1569 |
| DpnI | GATC | 6 cut(s) | 1104, 1220, 1266, 1491, 1567, 1586 |
| DpnII | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| DraIII | CACNNNGTG | 1 cut(s) | 1487 |
| EaeI | YGGCCR | 1 cut(s) | 489 |
| Eam1104I | CTCTTC | 2 cut(s) | 166, 172 |
| EarI | CTCTTC | 2 cut(s) | 166, 172 |
| EciI | GGCGGA | 1 cut(s) | 187 |
| Ecl136II | GAGCTC | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 4 cut(s) | 234, 315, 563, 1106 |
| Eco147I | AGGCCT | 2 cut(s) | 398, 947 |
| Eco24I | GRGCYC | 1 cut(s) | 297 |
| Eco47I | GGWCC | 1 cut(s) | 283 |
| Eco53kI | GAGCTC | 1 cut(s) | 295 |
| Eco57I | CTGAAG | 2 cut(s) | 454, 1325 |
| Eco91I | GGTNACC | 1 cut(s) | 206 |
| EcoICRI | GAGCTC | 1 cut(s) | 295 |
| EcoO65I | GGTNACC | 1 cut(s) | 206 |
| EcoRI | GAATTC | 1 cut(s) | 1049 |
| EcoRII | CCWGG | 3 cut(s) | 1153, 1175, 1493 |
| EcoT14I | CCWWGG | 4 cut(s) | 234, 315, 563, 1106 |
| EcoT22I | ATGCAT | 1 cut(s) | 1507 |
| EcoT38I | GRGCYC | 1 cut(s) | 297 |
| ErhI | CCWWGG | 4 cut(s) | 234, 315, 563, 1106 |
| Esp3I | CGTCTC | 2 cut(s) | 314, 359 |
| FaeI | CATG | 7 cut(s) | 754, 920, 1003, 1046, 1257, 1273, 1364 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 764, 796, 1227, 1259 |
| FatI | CATG | 7 cut(s) | 750, 916, 999, 1042, 1253, 1269, 1360 |
| FauI | CCCGC | 1 cut(s) | 139 |
| FbaI | TGATCA | 1 cut(s) | 1218 |
| Fnu4HI | GCNGC | 8 cut(s) | 269, 356, 359, 384, 407, 747, 861, 1602 |
| FokI | GGATG | 4 cut(s) | 181, 1046, 1192, 1492 |
| FriOI | GRGCYC | 1 cut(s) | 297 |
| Fsp4HI | GCNGC | 8 cut(s) | 269, 356, 359, 384, 407, 747, 861, 1602 |
| FspBI | CTAG | 2 cut(s) | 564, 954 |
| GlaI | GCGC | 2 cut(s) | 354, 424 |
| GluI | GCNGC | 8 cut(s) | 269, 356, 359, 384, 407, 747, 861, 1602 |
| GsaI | CCCAGC | 1 cut(s) | 377 |
| GsuI | CTGGAG | 2 cut(s) | 383, 1418 |
| HapII | CCGG | 3 cut(s) | 281, 345, 1383 |
| HgaI | GACGC | 2 cut(s) | 644, 1220 |
| HhaI | GCGC | 2 cut(s) | 355, 425 |
| Hin1I | GRCGYC | 1 cut(s) | 1356 |
| Hin1II | CATG | 7 cut(s) | 754, 920, 1003, 1046, 1257, 1273, 1364 |
| Hin6I | GCGC | 2 cut(s) | 353, 423 |
| HinP1I | GCGC | 2 cut(s) | 353, 423 |
| HindIII | AAGCTT | 2 cut(s) | 773, 1205 |
| HinfI | GANTC | 5 cut(s) | 239, 712, 849, 962, 1021 |
| HpaII | CCGG | 3 cut(s) | 281, 345, 1383 |
| HphI | GGTGA | 5 cut(s) | 31, 67, 200, 644, 1099 |
| Hpy166II | GTNNAC | 1 cut(s) | 277 |
| Hpy188I | TCNGA | 8 cut(s) | 9, 461, 571, 683, 711, 885, 1223, 1584 |
| Hpy188III | TCNNGA | 4 cut(s) | 224, 654, 917, 1397 |
| Hpy8I | GTNNAC | 1 cut(s) | 277 |
| HpyAV | CCTTC | 6 cut(s) | 64, 221, 478, 935, 1064, 1364 |
| HpyCH4III | ACNGT | 6 cut(s) | 304, 509, 898, 936, 989, 1447 |
| HpyCH4IV | ACGT | 3 cut(s) | 323, 368, 1356 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 350, 429, 796, 866, 1159, 1331 |
| HpyF3I | CTNAG | 4 cut(s) | 426, 680, 719, 1569 |
| HpySE526I | ACGT | 3 cut(s) | 323, 368, 1356 |
| Hsp92I | GRCGYC | 1 cut(s) | 1356 |
| Hsp92II | CATG | 7 cut(s) | 754, 920, 1003, 1046, 1257, 1273, 1364 |
| HspAI | GCGC | 2 cut(s) | 353, 423 |
| Ksp22I | TGATCA | 1 cut(s) | 1218 |
| Kzo9I | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| LmnI | GCTCC | 7 cut(s) | 108, 300, 1037, 1111, 1184, 1297, 1374 |
| Lsp1109I | GCAGC | 5 cut(s) | 255, 393, 733, 847, 1588 |
| LweI | GCATC | 3 cut(s) | 1312, 1402, 1514 |
| MaeI | CTAG | 2 cut(s) | 564, 954 |
| MaeII | ACGT | 3 cut(s) | 323, 368, 1356 |
| MaeIII | GTNAC | 7 cut(s) | 206, 632, 675, 1249, 1417, 1447, 1512 |
| MalI | GATC | 6 cut(s) | 1104, 1220, 1266, 1491, 1567, 1586 |
| MboI | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| MfeI | CAATTG | 1 cut(s) | 1028 |
| MflI | RGATCY | 2 cut(s) | 1102, 1565 |
| MhlI | GDGCHC | 3 cut(s) | 297, 514, 1042 |
| MlsI | TGGCCA | 1 cut(s) | 491 |
| MluCI | AATT | 6 cut(s) | 1028, 1049, 1121, 1131, 1170, 1337 |
| MluI | ACGCGT | 1 cut(s) | 636 |
| MluNI | TGGCCA | 1 cut(s) | 491 |
| MlyI | GAGTC | 2 cut(s) | 233, 1015 |
| MmeI | TCCRAC | 1 cut(s) | 514 |
| Mox20I | TGGCCA | 1 cut(s) | 491 |
| Mph1103I | ATGCAT | 1 cut(s) | 1507 |
| MroXI | GAANNNNTTC | 2 cut(s) | 924, 1053 |
| MscI | TGGCCA | 1 cut(s) | 491 |
| MseI | TTAA | 5 cut(s) | 585, 855, 1083, 1532, 1562 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1085 |
| Msp20I | TGGCCA | 1 cut(s) | 491 |
| MspA1I | CMGCKG | 1 cut(s) | 268 |
| MspI | CCGG | 3 cut(s) | 281, 345, 1383 |
| MspR9I | CCNGG | 5 cut(s) | 281, 1155, 1177, 1383, 1495 |
| MunI | CAATTG | 1 cut(s) | 1028 |
| Mva1269I | GAATGC | 2 cut(s) | 926, 1507 |
| MvaI | CCWGG | 3 cut(s) | 1155, 1177, 1495 |
| MvnI | CGCG | 2 cut(s) | 355, 638 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 350, 429, 796, 866, 1159, 1331 |
| NciI | CCSGG | 2 cut(s) | 281, 1383 |
| NdeII | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| NlaIII | CATG | 7 cut(s) | 754, 920, 1003, 1046, 1257, 1273, 1364 |
| NlaIV | GGNNCC | 4 cut(s) | 285, 511, 1104, 1293 |
| NmuCI | GTSAC | 6 cut(s) | 206, 632, 1249, 1417, 1447, 1512 |
| NsiI | ATGCAT | 1 cut(s) | 1507 |
| NspI | RCATGY | 2 cut(s) | 1003, 1046 |
| PagI | TCATGA | 1 cut(s) | 916 |
| PceI | AGGCCT | 2 cut(s) | 398, 947 |
| PciI | ACATGT | 1 cut(s) | 1042 |
| PctI | GAATGC | 2 cut(s) | 926, 1507 |
| PdmI | GAANNNNTTC | 2 cut(s) | 924, 1053 |
| PfeI | GAWTC | 3 cut(s) | 712, 849, 962 |
| PfoI | TCCNGGA | 1 cut(s) | 1381 |
| PkrI | GCNGC | 8 cut(s) | 270, 357, 360, 385, 408, 748, 862, 1603 |
| PleI | GAGTC | 2 cut(s) | 233, 1015 |
| PpsI | GAGTC | 2 cut(s) | 233, 1015 |
| PscI | ACATGT | 1 cut(s) | 1042 |
| Psp124BI | GAGCTC | 1 cut(s) | 297 |
| Psp6I | CCWGG | 3 cut(s) | 1153, 1175, 1493 |
| PspEI | GGTNACC | 1 cut(s) | 206 |
| PspFI | CCCAGC | 1 cut(s) | 373 |
| PspGI | CCWGG | 3 cut(s) | 1153, 1175, 1493 |
| PspN4I | GGNNCC | 4 cut(s) | 285, 511, 1104, 1293 |
| PspPI | GGNCC | 4 cut(s) | 218, 231, 259, 283 |
| PstI | CTGCAG | 2 cut(s) | 411, 865 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| PsuI | RGATCY | 2 cut(s) | 1102, 1565 |
| PvuII | CAGCTG | 1 cut(s) | 268 |
| RsaI | GTAC | 3 cut(s) | 67, 812, 938 |
| RsaNI | GTAC | 3 cut(s) | 66, 811, 937 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1085 |
| SacI | GAGCTC | 1 cut(s) | 297 |
| SaqAI | TTAA | 5 cut(s) | 585, 855, 1083, 1532, 1562 |
| SatI | GCNGC | 8 cut(s) | 269, 356, 359, 384, 407, 747, 861, 1602 |
| Sau3AI | GATC | 6 cut(s) | 1102, 1218, 1264, 1489, 1565, 1584 |
| Sau96I | GGNCC | 4 cut(s) | 218, 231, 259, 283 |
| SchI | GAGTC | 2 cut(s) | 233, 1015 |
| ScrFI | CCNGG | 5 cut(s) | 281, 1155, 1177, 1383, 1495 |
| SduI | GDGCHC | 3 cut(s) | 297, 514, 1042 |
| SfaNI | GCATC | 3 cut(s) | 1312, 1402, 1514 |
| SfcI | CTRYAG | 2 cut(s) | 407, 861 |
| SinI | GGWCC | 1 cut(s) | 283 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1085 |
| SmlI | CTYRAG | 3 cut(s) | 98, 222, 1517 |
| SmoI | CTYRAG | 3 cut(s) | 98, 222, 1517 |
| Sse9I | AATT | 6 cut(s) | 1028, 1049, 1121, 1131, 1170, 1337 |
| SseBI | AGGCCT | 2 cut(s) | 398, 947 |
| SsiI | CCGC | 7 cut(s) | 132, 198, 355, 358, 384, 1211, 1452 |
| SspMI | CTAG | 2 cut(s) | 564, 954 |
| SstI | GAGCTC | 1 cut(s) | 297 |
| StuI | AGGCCT | 2 cut(s) | 398, 947 |
| StyD4I | CCNGG | 5 cut(s) | 279, 1153, 1175, 1381, 1493 |
| StyI | CCWWGG | 4 cut(s) | 234, 315, 563, 1106 |
| TaaI | ACNGT | 6 cut(s) | 304, 509, 898, 936, 989, 1447 |
| TaiI | ACGT | 3 cut(s) | 326, 371, 1359 |
| TaqI | TCGA | 2 cut(s) | 1024, 1439 |
| TasI | AATT | 6 cut(s) | 1028, 1049, 1121, 1131, 1170, 1337 |
| TauI | GCSGC | 3 cut(s) | 358, 361, 386 |
| TfiI | GAWTC | 3 cut(s) | 712, 849, 962 |
| Tru1I | TTAA | 5 cut(s) | 585, 855, 1083, 1532, 1562 |
| Tru9I | TTAA | 5 cut(s) | 585, 855, 1083, 1532, 1562 |
| TscAI | CASTG | 3 cut(s) | 393, 739, 1267 |
| TseFI | GTSAC | 6 cut(s) | 206, 632, 1249, 1417, 1447, 1512 |
| TseI | GCWGC | 5 cut(s) | 268, 406, 746, 860, 1601 |
| Tsp45I | GTSAC | 6 cut(s) | 206, 632, 1249, 1417, 1447, 1512 |
| TspDTI | ATGAA | 6 cut(s) | 183, 852, 905, 917, 933, 1377 |
| TspGWI | ACGGA | 1 cut(s) | 1284 |
| TspRI | CASTG | 3 cut(s) | 393, 739, 1267 |
| VpaK11BI | GGWCC | 1 cut(s) | 283 |
| XapI | RAATTY | 2 cut(s) | 1049, 1131 |
| XceI | RCATGY | 2 cut(s) | 1003, 1046 |
| XmaJI | CCTAGG | 1 cut(s) | 563 |
| XmnI | GAANNNNTTC | 2 cut(s) | 924, 1053 |
| XspI | CTAG | 2 cut(s) | 564, 954 |
| ZraI | GACGTC | 1 cut(s) | 1357 |
| Zsp2I | ATGCAT | 1 cut(s) | 1507 |