FvH4_5g21720

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0016857
Physical Location & Seq
Reverse (-)
13125126 .. 13127775
2650 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g21720.t1

Sequence Viewer

Length: 1785 bp
ATGATCAGATTATTTTACAATAGAATAGATAACGAAAATGGAATATTATTAAAGAAGAAGAAGAAAATGAGCAATTTGGGTTTGCCTTGTTTTACACAACAACTAAACAAAGAAGAGGGATTTAACAGCCCACAGACTCACAATTCATCATCTTTAGAAGTTTCAAAAACTTGGCCATCAAACTTTTCCTGCAAGTCACTGTGCAAAACCTCCATAGAAGCCATGGGTGTAAAACCCAAGGAAAACCCACCATCCCCAACCTTGATAGAAACAGTGGAAGAAATCATGAAAATCTACAAGTCACTGCCACCAAGGCCCTCCATTGAAGAGGTTGAAGCAGCCATGTCTGTGCTCAAAACAGTTGAAACTGAACAAGAACAGAAACTTGAGGAGATATCAAAGCAGGTGATTCCCCAAGATGTCCCTGAAGAACTCTTCTCTGTTTTGCAGCAAGTGAGAAGGACCATGGTCCTGTTTCAGAGTCATGAACAGAGGAAAGAGGCTTCTGATGTGGTTGAAGTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGGGCTGGTTTCTGGTGACACCCAGAAGGAGAATCATGTTGCTTTCGGGTACCCAGTTGGGGAAATTGTGAGAGAGCCTGTGATTAGTGATGAGAGTTTTGTGATGAACAAGAAGAAGGAAGATGAAGAGTTGAAGAGAGATGGTTTCAAGGGTTTAATCAAGAGTTCTTCTACAGTTTCTGCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTGGCAGCTATAATAGAAAACACTGCTAAAACTGGAGAAGTAGTTCTTGATCTTAGAGGAAAATTAGTGGATCAAGTGGAGTGGCTTCCAATATCAATAGGGAAATTATCAGATGTCACTGAATTGGATTTGTCCGAAAACCGAATCATGGCTATTCCTCCTACCATCGGTGGCCTTAAAGCCTTAACAAAGCTTGACATCCACTCTAACCAACTCATAAACCTTCCGGACTCATTTGGTGAGTTGAGTAATCTCACTGATCTTGATCTCCATGCAAACAGATTGAAATCACTTCCTGCTTCATTTGGAAACTTGATCAACCTTATGAATCTTGATTTGAGTTCAAATAGCTTCACCCATTTGCCGGAGGTTATTGGGAAGCTGATCAGCTTGAAGACATTGAATGCTGAGACAAATGATCTCGAGGAACTGCCTTTCACAATCGGATCCTGCACATCTCTTGCTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTTCCTGAGGCAATTGGAAAGCTTGAAAACTTGGAGATCCTCACAGTTCACTACAACAGAATCAAAGGGTTGCCAACAACAATGGGGAATCTTAGTTGTTTGAAGGAGCTTGATGTTAGCTTCAATGAACTTGAAACAATACCTGAGAACTTGTGTTTTGCAGTAAGCCTCCAAAAACTGAATGTGGCAAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAGATTAGGAACTTACCATTATCTTTCAGGTTCTTGTCAAAACTGAAAGTTTTTCGTGCCGATCAAACACCTTTGGAAGTTCCCCCAAGACATGTGATACAGTTGGGTCCTCAGGCAGTTGTAAAGTACATGGAAGAATATGTTGCCAAGAGGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGAAGGGTTTTTGGTTCTGGATTTGTTCAAAACTCTGCTCCAGCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

595

Amino Acids

66.62

Weight (kDa)

5.58

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 285 - 352 1.5e-07 Leucine-rich repeat region
LRR_8 PF13855 299 - 355 1.6e-09 Leucine rich repeat
LRR_14 PF23598 326 - 394 3.3e-09 Leucine-rich repeat region
LRR_8 PF13855 343 - 401 1.4e-07 Leucine rich repeat
LRR_14 PF23598 362 - 442 2.9e-12 Leucine-rich repeat region
LRR_8 PF13855 413 - 470 4.5e-08 Leucine rich repeat
LRR_14 PF23598 417 - 488 2.1e-07 Leucine-rich repeat region
LRR_14 PF23598 494 - 539 3.8e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 394
Acc36I ACCTGC 1 cut(s) 394
Acc65I GGTACC 1 cut(s) 615
AccB1I GGYRCC 1 cut(s) 615
AccII CGCG 1 cut(s) 1498
AccIII TCCGGA 1 cut(s) 1006
AciI CCGC 2 cut(s) 1496, 1498
AclWI GGATC 4 cut(s) 858, 1221, 1234, 1309
AcoI YGGCCR 1 cut(s) 173
AcsI RAATTY 1 cut(s) 1258
AcuI CTGAAG 1 cut(s) 447
AfaI GTAC 2 cut(s) 617, 1676
AfiI CCNNNNNNNGG 4 cut(s) 625, 928, 947, 1144
AflIII ACRYGT 1 cut(s) 1639
AloI GAACNNNNNNTCC 2 cut(s) 807, 839
Alw21I GWGCWC 2 cut(s) 354, 1279
Alw26I GTCTC 1 cut(s) 1184
AlwI GGATC 4 cut(s) 858, 1221, 1234, 1309
AlwNI CAGNNNCTG 1 cut(s) 746
Ama87I CYCGRG 1 cut(s) 1202
Aor13HI TCCGGA 1 cut(s) 1006
AoxI GGCC 4 cut(s) 173, 314, 547, 952
ApeKI GCWGC 5 cut(s) 338, 448, 785, 1249, 1706
ApoI RAATTY 1 cut(s) 1258
Asp700I GAANNNNTTC 1 cut(s) 822
Asp718I GGTACC 1 cut(s) 615
AspS9I GGNCC 4 cut(s) 315, 462, 469, 1655
AsuHPI GGTGA 4 cut(s) 418, 593, 1031, 1126
AvaI CYCGRG 1 cut(s) 1202
AvaII GGWCC 3 cut(s) 462, 469, 1655
AxyI CCTNAGG 2 cut(s) 1284, 1659
BalI TGGCCA 1 cut(s) 175
BamHI GGATCC 1 cut(s) 1226
BanI GGYRCC 1 cut(s) 615
BanII GRGCYC 1 cut(s) 1279
BbsI GAAGAC 1 cut(s) 1181
Bbv12I GWGCWC 2 cut(s) 354, 1279
BbvI GCAGC 5 cut(s) 350, 460, 797, 1236, 1693
BccI CCATC 5 cut(s) 184, 259, 539, 701, 953
BclI TGATCA 4 cut(s) 3, 1095, 1164, 1546
BcoDI GTCTC 1 cut(s) 1184
BfaI CTAG 1 cut(s) 1783
BfmI CTRYAG 2 cut(s) 738, 747
BfuAI ACCTGC 1 cut(s) 394
BglI GCCNNNNNGGC 1 cut(s) 313
BisI GCNGC 6 cut(s) 339, 449, 786, 1250, 1496, 1707
BlpI GCTNAGC 1 cut(s) 1245
BlsI GCNGC 6 cut(s) 340, 450, 787, 1251, 1497, 1708
Bme18I GGWCC 3 cut(s) 462, 469, 1655
BmeT110I CYCGRG 1 cut(s) 1202
BmgT120I GGNCC 4 cut(s) 315, 462, 469, 1655
BmiI GGNNCC 3 cut(s) 617, 1228, 1656
BmrI ACTGGG 1 cut(s) 614
BmsI GCATC 2 cut(s) 1509, 1693
BmuI ACTGGG 1 cut(s) 614
BoxI GACNNNNGTC 1 cut(s) 467
BpiI GAAGAC 1 cut(s) 1181
BpmI CTGGAG 2 cut(s) 834, 1756
Bpu1102I GCTNAGC 1 cut(s) 1245
BpuEI CTTGAG 2 cut(s) 407, 1535
BsaBI GATNNNNATC 2 cut(s) 1044, 1066
BsaJI CCNNGG 5 cut(s) 222, 237, 311, 465, 1496
BsaWI WCCGGW 1 cut(s) 1006
BsaXI ACNNNNNCTCC 2 cut(s) 807, 837
Bsc4I CCNNNNNNNGG 4 cut(s) 625, 928, 947, 1144
Bse1I ACTGG 2 cut(s) 620, 817
Bse21I CCTNAGG 2 cut(s) 1284, 1659
Bse8I GATNNNNATC 2 cut(s) 1044, 1066
BseAI TCCGGA 1 cut(s) 1006
BseDI CCNNGG 5 cut(s) 222, 237, 311, 465, 1496
BseGI GGATG 3 cut(s) 251, 978, 1708
BseJI GATNNNNATC 2 cut(s) 1044, 1066
BseLI CCNNNNNNNGG 4 cut(s) 625, 928, 947, 1144
BseMII CTCAG 6 cut(s) 750, 1179, 1236, 1275, 1413, 1673
BseNI ACTGG 2 cut(s) 620, 817
BseRI GAGGAG 1 cut(s) 404
BseXI GCAGC 5 cut(s) 350, 460, 797, 1236, 1693
BsgI GTGCAG 1 cut(s) 1216
Bsh1236I CGCG 1 cut(s) 1498
BshFI GGCC 4 cut(s) 175, 316, 549, 954
BshNI GGYRCC 1 cut(s) 615
BsiHKAI GWGCWC 2 cut(s) 354, 1279
BsiHKCI CYCGRG 1 cut(s) 1202
BsiSI CCGG 2 cut(s) 1007, 1145
BslFI GGGAC 1 cut(s) 407
BslI CCNNNNNNNGG 4 cut(s) 625, 928, 947, 1144
BsmAI GTCTC 1 cut(s) 1184
BsmFI GGGAC 1 cut(s) 407
BsmI GAATGC 1 cut(s) 1189
BsnI GGCC 4 cut(s) 175, 316, 549, 954
BsoBI CYCGRG 1 cut(s) 1202
Bsp1286I GDGCHC 2 cut(s) 354, 1279
Bsp13I TCCGGA 1 cut(s) 1006
Bsp1720I GCTNAGC 1 cut(s) 1245
Bsp19I CCATGG 2 cut(s) 222, 465
BspACI CCGC 2 cut(s) 1496, 1498
BspANI GGCC 4 cut(s) 175, 316, 549, 954
BspCNI CTCAG 6 cut(s) 751, 1180, 1237, 1276, 1414, 1672
BspEI TCCGGA 1 cut(s) 1006
BspFNI CGCG 1 cut(s) 1498
BspHI TCATGA 2 cut(s) 285, 484
BspLI GGNNCC 3 cut(s) 617, 1228, 1656
BspMAI CTGCAG 1 cut(s) 751
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 4 cut(s) 858, 1221, 1234, 1309
BspQI GCTCTTC 1 cut(s) 1284
BspT107I GGYRCC 1 cut(s) 615
BsrI ACTGG 2 cut(s) 620, 817
BssECI CCNNGG 5 cut(s) 222, 237, 311, 465, 1496
BssT1I CCWWGG 4 cut(s) 222, 237, 311, 465
Bst4CI ACNGT 6 cut(s) 201, 274, 361, 742, 1324, 1650
Bst6I CTCTTC 7 cut(s) 108, 321, 440, 687, 695, 1284, 1521
BstDEI CTNAG 9 cut(s) 759, 833, 1188, 1245, 1271, 1284, 1370, 1422, 1659
BstDSI CCRYGG 3 cut(s) 222, 465, 1496
BstF5I GGATG 3 cut(s) 251, 978, 1708
BstFNI CGCG 1 cut(s) 1498
BstMAI GTCTC 1 cut(s) 1184
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNSI RCATGY 1 cut(s) 1643
BstPAI GACNNNNGTC 1 cut(s) 467
BstSFI CTRYAG 2 cut(s) 738, 747
BstUI CGCG 1 cut(s) 1498
BstV1I GCAGC 5 cut(s) 350, 460, 797, 1236, 1693
BstV2I GAAGAC 1 cut(s) 1181
BstX2I RGATCY 2 cut(s) 1226, 1314
BstYI RGATCY 2 cut(s) 1226, 1314
Bsu36I CCTNAGG 2 cut(s) 1284, 1659
BsuRI GGCC 4 cut(s) 175, 316, 549, 954
BtgI CCRYGG 3 cut(s) 222, 465, 1496
BtsCI GGATG 3 cut(s) 251, 978, 1708
BtsI GCAGTG 2 cut(s) 302, 801
BtsIMutI CAGTG 7 cut(s) 197, 279, 302, 801, 897, 1035, 1546
BveI ACCTGC 1 cut(s) 394
CaiI CAGNNNCTG 1 cut(s) 746
CciI TCATGA 2 cut(s) 285, 484
Cfr13I GGNCC 4 cut(s) 315, 462, 469, 1655
Cfr42I CCGCGG 1 cut(s) 1499
Csp6I GTAC 2 cut(s) 616, 1675
CspCI CAANNNNNGTGG 2 cut(s) 842, 877
CviQI GTAC 2 cut(s) 616, 1675
DdeI CTNAG 9 cut(s) 759, 833, 1188, 1245, 1271, 1284, 1370, 1422, 1659
EaeI YGGCCR 1 cut(s) 173
Eam1104I CTCTTC 7 cut(s) 108, 321, 440, 687, 695, 1284, 1521
EarI CTCTTC 7 cut(s) 108, 321, 440, 687, 695, 1284, 1521
Ecl136II GAGCTC 1 cut(s) 1277
Eco130I CCWWGG 4 cut(s) 222, 237, 311, 465
Eco24I GRGCYC 1 cut(s) 1279
Eco32I GATATC 2 cut(s) 396, 1537
Eco47I GGWCC 3 cut(s) 462, 469, 1655
Eco53kI GAGCTC 1 cut(s) 1277
Eco57I CTGAAG 1 cut(s) 447
Eco81I CCTNAGG 2 cut(s) 1284, 1659
Eco88I CYCGRG 1 cut(s) 1202
EcoICRI GAGCTC 1 cut(s) 1277
EcoO109I RGGNCCY 2 cut(s) 315, 1655
EcoRV GATATC 2 cut(s) 396, 1537
EcoT14I CCWWGG 4 cut(s) 222, 237, 311, 465
EcoT38I GRGCYC 1 cut(s) 1279
ErhI CCWWGG 4 cut(s) 222, 237, 311, 465
FalI AAGNNNNNCTT 2 cut(s) 810, 842
FaqI GGGAC 1 cut(s) 407
FbaI TGATCA 4 cut(s) 3, 1095, 1164, 1546
Fnu4HI GCNGC 6 cut(s) 339, 449, 786, 1250, 1496, 1707
FokI GGATG 3 cut(s) 238, 965, 1715
FriOI GRGCYC 1 cut(s) 1279
Fsp4HI GCNGC 6 cut(s) 339, 449, 786, 1250, 1496, 1707
FspBI CTAG 1 cut(s) 1783
GluI GCNGC 6 cut(s) 339, 449, 786, 1250, 1496, 1707
GsuI CTGGAG 2 cut(s) 834, 1756
HaeIII GGCC 4 cut(s) 175, 316, 549, 954
HapII CCGG 2 cut(s) 1007, 1145
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HindIII AAGCTT 2 cut(s) 971, 1298
HpaII CCGG 2 cut(s) 1007, 1145
HphI GGTGA 4 cut(s) 418, 593, 1031, 1126
Hpy166II GTNNAC 2 cut(s) 523, 1327
Hpy8I GTNNAC 2 cut(s) 523, 1327
HpyAV CCTTC 7 cut(s) 453, 586, 676, 772, 1013, 1375, 1729
HpyCH4III ACNGT 6 cut(s) 201, 274, 361, 742, 1324, 1650
HpyCH4V TGCA 9 cut(s) 192, 204, 448, 749, 1055, 1233, 1252, 1439, 1709
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 9 cut(s) 759, 833, 1188, 1245, 1271, 1284, 1370, 1422, 1659
Kpn2I TCCGGA 1 cut(s) 1006
KpnI GGTACC 1 cut(s) 619
Ksp22I TGATCA 4 cut(s) 3, 1095, 1164, 1546
KspI CCGCGG 1 cut(s) 1499
LguI GCTCTTC 1 cut(s) 1284
LmnI GCTCC 2 cut(s) 1384, 1775
Lsp1109I GCAGC 5 cut(s) 350, 460, 797, 1236, 1693
LweI GCATC 2 cut(s) 1509, 1693
MaeI CTAG 1 cut(s) 1783
MaeIII GTNAC 4 cut(s) 195, 300, 581, 895
MfeI CAATTG 2 cut(s) 1290, 1503
MflI RGATCY 2 cut(s) 1226, 1314
MhlI GDGCHC 2 cut(s) 354, 1279
MlsI TGGCCA 1 cut(s) 175
MluNI TGGCCA 1 cut(s) 175
MlyI GAGTC 4 cut(s) 130, 490, 764, 1004
MmeI TCCRAC 1 cut(s) 1512
Mox20I TGGCCA 1 cut(s) 175
MroI TCCGGA 1 cut(s) 1006
MroXI GAANNNNTTC 1 cut(s) 822
MscI TGGCCA 1 cut(s) 175
MseI TTAA 6 cut(s) 50, 123, 722, 767, 957, 965
MslI CAYNNNNRTG 1 cut(s) 347
Msp20I TGGCCA 1 cut(s) 175
MspA1I CMGCKG 1 cut(s) 1498
MspI CCGG 2 cut(s) 1007, 1145
MunI CAATTG 2 cut(s) 1290, 1503
Mva1269I GAATGC 1 cut(s) 1189
MvnI CGCG 1 cut(s) 1498
MwoI GCNNNNNNNGC 1 cut(s) 313
NcoI CCATGG 2 cut(s) 222, 465
NlaIV GGNNCC 3 cut(s) 617, 1228, 1656
NmuCI GTSAC 4 cut(s) 195, 300, 581, 895
NspI RCATGY 1 cut(s) 1643
PaeR7I CTCGAG 1 cut(s) 1202
PagI TCATGA 2 cut(s) 285, 484
PaqCI CACCTGC 1 cut(s) 394
PciI ACATGT 1 cut(s) 1639
PciSI GCTCTTC 1 cut(s) 1284
PctI GAATGC 1 cut(s) 1189
PdmI GAANNNNTTC 1 cut(s) 822
PfeI GAWTC 6 cut(s) 409, 598, 924, 1108, 1338, 1366
PkrI GCNGC 6 cut(s) 340, 450, 787, 1251, 1497, 1708
PleI GAGTC 4 cut(s) 130, 489, 763, 1004
PpsI GAGTC 4 cut(s) 130, 489, 763, 1004
PpuMI RGGWCCY 1 cut(s) 1655
PscI ACATGT 1 cut(s) 1639
PshAI GACNNNNGTC 1 cut(s) 467
Psp124BI GAGCTC 1 cut(s) 1279
Psp5II RGGWCCY 1 cut(s) 1655
PspN4I GGNNCC 3 cut(s) 617, 1228, 1656
PspPI GGNCC 4 cut(s) 315, 462, 469, 1655
PspPPI RGGWCCY 1 cut(s) 1655
PstI CTGCAG 1 cut(s) 751
PstNI CAGNNNCTG 1 cut(s) 746
PsuI RGATCY 2 cut(s) 1226, 1314
RsaI GTAC 2 cut(s) 617, 1676
RsaNI GTAC 2 cut(s) 616, 1675
RseI CAYNNNNRTG 1 cut(s) 347
SacI GAGCTC 1 cut(s) 1279
SacII CCGCGG 1 cut(s) 1499
SapI GCTCTTC 1 cut(s) 1284
SaqAI TTAA 6 cut(s) 50, 123, 722, 767, 957, 965
SatI GCNGC 6 cut(s) 339, 449, 786, 1250, 1496, 1707
Sau96I GGNCC 4 cut(s) 315, 462, 469, 1655
SchI GAGTC 4 cut(s) 130, 490, 764, 1004
SduI GDGCHC 2 cut(s) 354, 1279
SfaNI GCATC 2 cut(s) 1509, 1693
SfcI CTRYAG 2 cut(s) 738, 747
Sfr274I CTCGAG 1 cut(s) 1202
Sfr303I CCGCGG 1 cut(s) 1499
SgrBI CCGCGG 1 cut(s) 1499
SinI GGWCC 3 cut(s) 462, 469, 1655
SlaI CTCGAG 1 cut(s) 1202
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 3 cut(s) 386, 1202, 1514
SmoI CTYRAG 3 cut(s) 386, 1202, 1514
SsiI CCGC 2 cut(s) 1496, 1498
SspI AATATT 1 cut(s) 45
SspMI CTAG 1 cut(s) 1783
SstI GAGCTC 1 cut(s) 1279
StyI CCWWGG 4 cut(s) 222, 237, 311, 465
TaaI ACNGT 6 cut(s) 201, 274, 361, 742, 1324, 1650
TaqI TCGA 1 cut(s) 1203
TatI WGTACW 1 cut(s) 1674
TauI GCSGC 1 cut(s) 1498
TfiI GAWTC 6 cut(s) 409, 598, 924, 1108, 1338, 1366
Tru1I TTAA 6 cut(s) 50, 123, 722, 767, 957, 965
Tru9I TTAA 6 cut(s) 50, 123, 722, 767, 957, 965
TscAI CASTG 7 cut(s) 204, 279, 309, 808, 904, 1042, 1546
TseFI GTSAC 4 cut(s) 195, 300, 581, 895
TseI GCWGC 5 cut(s) 338, 448, 785, 1249, 1706
Tsp45I GTSAC 4 cut(s) 195, 300, 581, 895
TspDTI ATGAA 9 cut(s) 135, 302, 501, 686, 705, 791, 1071, 1121, 1419
TspRI CASTG 7 cut(s) 204, 279, 309, 808, 904, 1042, 1546
VpaK11BI GGWCC 3 cut(s) 462, 469, 1655
XapI RAATTY 1 cut(s) 1258
XceI RCATGY 1 cut(s) 1643
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XhoI CTCGAG 1 cut(s) 1202
XmnI GAANNNNTTC 1 cut(s) 822
XspI CTAG 1 cut(s) 1783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.