Plant intracellular Ras-group-related LRR protein 5-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21720 |
| malus_domestica | MD06G1032200.v1.1 |
| prunus_persica | Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0209221 |
| rosa_laevigata | RLG00000003156 |
| rosa_multiflora | Rmu_sc0001701.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00249620 |
| rosa_rugosa | Rorug07G0110400 |
| rosa_samantha | Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200 |
| rosa_wichuraiana | Rw7G020730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 782, 1430 |
| AccB1I | GGYRCC | 1 cut(s) | 1439 |
| AciI | CCGC | 2 cut(s) | 92, 722 |
| AclWI | GGATC | 3 cut(s) | 716, 1005, 1018 |
| AcoI | YGGCCR | 1 cut(s) | 948 |
| AcsI | RAATTY | 1 cut(s) | 1573 |
| AcuI | CTGAAG | 4 cut(s) | 231, 510, 1184, 1342 |
| AfaI | GTAC | 3 cut(s) | 1455, 1460, 1596 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 712, 731, 1246 |
| AflII | CTTAAG | 1 cut(s) | 1267 |
| AflIII | ACRYGT | 1 cut(s) | 385 |
| AhlI | ACTAGT | 1 cut(s) | 1597 |
| AjnI | CCWGG | 2 cut(s) | 267, 1443 |
| Alw21I | GWGCWC | 4 cut(s) | 138, 219, 987, 1063 |
| Alw26I | GTCTC | 2 cut(s) | 858, 1391 |
| AlwI | GGATC | 3 cut(s) | 716, 1005, 1018 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 350 |
| Ama87I | CYCGRG | 1 cut(s) | 986 |
| AoxI | GGCC | 3 cut(s) | 714, 736, 948 |
| ApeKI | GCWGC | 2 cut(s) | 122, 569 |
| ApoI | RAATTY | 1 cut(s) | 1573 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 511 |
| AspLEI | GCGC | 1 cut(s) | 15 |
| AspS9I | GGNCC | 3 cut(s) | 271, 400, 715 |
| AsuHPI | GGTGA | 4 cut(s) | 250, 377, 514, 815 |
| AvaI | CYCGRG | 1 cut(s) | 986 |
| AvaII | GGWCC | 2 cut(s) | 271, 400 |
| BaeGI | GKGCMC | 1 cut(s) | 1444 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 360, 393 |
| BalI | TGGCCA | 1 cut(s) | 950 |
| BamHI | GGATCC | 1 cut(s) | 1010 |
| BanI | GGYRCC | 1 cut(s) | 1439 |
| BanII | GRGCYC | 3 cut(s) | 219, 987, 1063 |
| BbsI | GAAGAC | 2 cut(s) | 30, 516 |
| Bbv12I | GWGCWC | 4 cut(s) | 138, 219, 987, 1063 |
| BbvI | GCAGC | 2 cut(s) | 134, 581 |
| BccI | CCATC | 4 cut(s) | 43, 298, 479, 724 |
| BciT130I | CCWGG | 2 cut(s) | 269, 1445 |
| BclI | TGATCA | 2 cut(s) | 432, 1330 |
| BcoDI | GTCTC | 2 cut(s) | 858, 1391 |
| BcuI | ACTAGT | 1 cut(s) | 1597 |
| BfaI | CTAG | 1 cut(s) | 1598 |
| BfrI | CTTAAG | 1 cut(s) | 1267 |
| BisI | GCNGC | 3 cut(s) | 92, 123, 570 |
| BlsI | GCNGC | 3 cut(s) | 93, 124, 571 |
| Bme1390I | CCNGG | 2 cut(s) | 269, 1445 |
| Bme18I | GGWCC | 2 cut(s) | 271, 400 |
| BmeT110I | CYCGRG | 1 cut(s) | 986 |
| BmgT120I | GGNCC | 3 cut(s) | 271, 400, 715 |
| BmiI | GGNNCC | 3 cut(s) | 402, 1012, 1441 |
| BmrFI | CCNGG | 2 cut(s) | 269, 1445 |
| BmrI | ACTGGG | 2 cut(s) | 121, 398 |
| BmsI | GCATC | 1 cut(s) | 1293 |
| BmuI | ACTGGG | 2 cut(s) | 121, 398 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1366 |
| BpiI | GAAGAC | 2 cut(s) | 30, 516 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 206, 238 |
| BpuEI | CTTGAG | 2 cut(s) | 191, 1319 |
| BsaBI | GATNNNNATC | 2 cut(s) | 828, 1047 |
| BsaI | GGTCTC | 1 cut(s) | 858 |
| BsaJI | CCNNGG | 1 cut(s) | 1443 |
| BsaWI | WCCGGW | 1 cut(s) | 705 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 299, 329 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 712, 731, 1246 |
| Bse1I | ACTGG | 5 cut(s) | 45, 127, 404, 693, 951 |
| Bse8I | GATNNNNATC | 2 cut(s) | 828, 1047 |
| BseBI | CCWGG | 2 cut(s) | 269, 1445 |
| BseDI | CCNNGG | 1 cut(s) | 1443 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseJI | GATNNNNATC | 2 cut(s) | 828, 1047 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 712, 731, 1246 |
| BseMII | CTCAG | 3 cut(s) | 386, 534, 1367 |
| BseNI | ACTGG | 5 cut(s) | 45, 127, 404, 693, 951 |
| BseRI | GAGGAG | 2 cut(s) | 170, 188 |
| BseSI | GKGCMC | 1 cut(s) | 1444 |
| BseXI | GCAGC | 2 cut(s) | 134, 581 |
| BsgI | GTGCAG | 3 cut(s) | 552, 621, 1000 |
| BshFI | GGCC | 3 cut(s) | 716, 738, 950 |
| BshNI | GGYRCC | 1 cut(s) | 1439 |
| BsiHKAI | GWGCWC | 4 cut(s) | 138, 219, 987, 1063 |
| BsiHKCI | CYCGRG | 1 cut(s) | 986 |
| BsiSI | CCGG | 1 cut(s) | 706 |
| BslFI | GGGAC | 3 cut(s) | 70, 191, 1542 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 712, 731, 1246 |
| BsmAI | GTCTC | 2 cut(s) | 858, 1391 |
| BsmFI | GGGAC | 3 cut(s) | 70, 191, 1542 |
| BsmI | GAATGC | 2 cut(s) | 973, 1495 |
| BsnI | GGCC | 3 cut(s) | 716, 738, 950 |
| Bso31I | GGTCTC | 1 cut(s) | 858 |
| BsoBI | CYCGRG | 1 cut(s) | 986 |
| Bsp1286I | GDGCHC | 5 cut(s) | 138, 219, 987, 1063, 1444 |
| Bsp1407I | TGTACA | 1 cut(s) | 1453 |
| Bsp143I | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| BspACI | CCGC | 2 cut(s) | 92, 722 |
| BspANI | GGCC | 3 cut(s) | 716, 738, 950 |
| BspCNI | CTCAG | 3 cut(s) | 385, 535, 1368 |
| BspLI | GGNNCC | 3 cut(s) | 402, 1012, 1441 |
| BspPI | GGATC | 3 cut(s) | 716, 1005, 1018 |
| BspQI | GCTCTTC | 2 cut(s) | 207, 224 |
| BspT107I | GGYRCC | 1 cut(s) | 1439 |
| BspTI | CTTAAG | 1 cut(s) | 1267 |
| BspTNI | GGTCTC | 1 cut(s) | 858 |
| BsrGI | TGTACA | 1 cut(s) | 1453 |
| BsrI | ACTGG | 5 cut(s) | 45, 127, 404, 693, 951 |
| BssECI | CCNNGG | 1 cut(s) | 1443 |
| BssMI | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| Bst2UI | CCWGG | 2 cut(s) | 269, 1445 |
| Bst4CI | ACNGT | 6 cut(s) | 58, 145, 152, 430, 1144, 1458 |
| Bst6I | CTCTTC | 4 cut(s) | 105, 207, 224, 1305 |
| BstAFI | CTTAAG | 1 cut(s) | 1267 |
| BstAUI | TGTACA | 1 cut(s) | 1453 |
| BstC8I | GCNNGC | 2 cut(s) | 17, 861 |
| BstDEI | CTNAG | 5 cut(s) | 372, 543, 1055, 1093, 1376 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstHHI | GCGC | 1 cut(s) | 15 |
| BstKTI | GATC | 9 cut(s) | 334, 435, 616, 711, 826, 832, 1013, 1286, 1333 |
| BstMAI | GTCTC | 2 cut(s) | 858, 1391 |
| BstMBI | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstNI | CCWGG | 2 cut(s) | 269, 1445 |
| BstNSI | RCATGY | 1 cut(s) | 389 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1366 |
| BstSCI | CCNGG | 2 cut(s) | 267, 1443 |
| BstSLI | GKGCMC | 1 cut(s) | 1444 |
| BstV1I | GCAGC | 2 cut(s) | 134, 581 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 516 |
| BstX2I | RGATCY | 1 cut(s) | 1010 |
| BstYI | RGATCY | 1 cut(s) | 1010 |
| BsuRI | GGCC | 3 cut(s) | 716, 738, 950 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| BtsI | GCAGTG | 3 cut(s) | 540, 585, 1230 |
| BtsIMutI | CAGTG | 9 cut(s) | 52, 157, 442, 540, 585, 681, 819, 1230, 1330 |
| Cac8I | GCNNGC | 2 cut(s) | 17, 861 |
| CaiI | CAGNNNCTG | 1 cut(s) | 350 |
| CfoI | GCGC | 1 cut(s) | 15 |
| Cfr13I | GGNCC | 3 cut(s) | 271, 400, 715 |
| Csp6I | GTAC | 3 cut(s) | 1454, 1459, 1595 |
| CviAII | CATG | 5 cut(s) | 293, 386, 712, 836, 1462 |
| CviQI | GTAC | 3 cut(s) | 1454, 1459, 1595 |
| DdeI | CTNAG | 5 cut(s) | 372, 543, 1055, 1093, 1376 |
| DpnI | GATC | 9 cut(s) | 333, 434, 615, 710, 825, 831, 1012, 1285, 1332 |
| DpnII | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| DraI | TTTAAA | 1 cut(s) | 909 |
| EaeI | YGGCCR | 1 cut(s) | 948 |
| Eam1104I | CTCTTC | 4 cut(s) | 105, 207, 224, 1305 |
| EarI | CTCTTC | 4 cut(s) | 105, 207, 224, 1305 |
| EciI | GGCGGA | 1 cut(s) | 711 |
| Ecl136II | GAGCTC | 3 cut(s) | 217, 985, 1061 |
| Eco24I | GRGCYC | 3 cut(s) | 219, 987, 1063 |
| Eco31I | GGTCTC | 1 cut(s) | 858 |
| Eco32I | GATATC | 2 cut(s) | 180, 1321 |
| Eco47I | GGWCC | 2 cut(s) | 271, 400 |
| Eco53kI | GAGCTC | 3 cut(s) | 217, 985, 1061 |
| Eco57I | CTGAAG | 4 cut(s) | 231, 510, 1184, 1342 |
| Eco88I | CYCGRG | 1 cut(s) | 986 |
| EcoICRI | GAGCTC | 3 cut(s) | 217, 985, 1061 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoRII | CCWGG | 2 cut(s) | 267, 1443 |
| EcoRV | GATATC | 2 cut(s) | 180, 1321 |
| EcoT38I | GRGCYC | 3 cut(s) | 219, 987, 1063 |
| FaeI | CATG | 5 cut(s) | 296, 389, 715, 839, 1465 |
| FaqI | GGGAC | 3 cut(s) | 70, 191, 1542 |
| FatI | CATG | 5 cut(s) | 292, 385, 711, 835, 1461 |
| FbaI | TGATCA | 2 cut(s) | 432, 1330 |
| Fnu4HI | GCNGC | 3 cut(s) | 92, 123, 570 |
| FokI | GGATG | 1 cut(s) | 22 |
| FriOI | GRGCYC | 3 cut(s) | 219, 987, 1063 |
| Fsp4HI | GCNGC | 3 cut(s) | 92, 123, 570 |
| FspBI | CTAG | 1 cut(s) | 1598 |
| GlaI | GCGC | 1 cut(s) | 14 |
| GluI | GCNGC | 3 cut(s) | 92, 123, 570 |
| HaeIII | GGCC | 3 cut(s) | 716, 738, 950 |
| HapII | CCGG | 1 cut(s) | 706 |
| HhaI | GCGC | 1 cut(s) | 15 |
| Hin1II | CATG | 5 cut(s) | 296, 389, 715, 839, 1465 |
| Hin6I | GCGC | 1 cut(s) | 13 |
| HinP1I | GCGC | 1 cut(s) | 13 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HindIII | AAGCTT | 3 cut(s) | 167, 755, 1090 |
| HinfI | GANTC | 8 cut(s) | 473, 539, 553, 794, 1150, 1196, 1243, 1380 |
| HpaII | CCGG | 1 cut(s) | 706 |
| HphI | GGTGA | 4 cut(s) | 250, 377, 514, 815 |
| Hpy166II | GTNNAC | 3 cut(s) | 148, 538, 918 |
| Hpy188III | TCNNGA | 6 cut(s) | 340, 611, 791, 827, 1240, 1298 |
| Hpy8I | GTNNAC | 3 cut(s) | 148, 538, 918 |
| HpyAV | CCTTC | 7 cut(s) | 454, 556, 728, 797, 1159, 1366, 1519 |
| HpyCH4III | ACNGT | 6 cut(s) | 58, 145, 152, 430, 1144, 1458 |
| HpyCH4V | TGCA | 7 cut(s) | 232, 533, 602, 839, 1017, 1223, 1262 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 5 cut(s) | 372, 543, 1055, 1093, 1376 |
| Hsp92II | CATG | 5 cut(s) | 296, 389, 715, 839, 1465 |
| HspAI | GCGC | 1 cut(s) | 13 |
| Ksp22I | TGATCA | 2 cut(s) | 432, 1330 |
| Kzo9I | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| LguI | GCTCTTC | 2 cut(s) | 207, 224 |
| LmnI | GCTCC | 3 cut(s) | 1030, 1168, 1565 |
| Lsp1109I | GCAGC | 2 cut(s) | 134, 581 |
| LweI | GCATC | 1 cut(s) | 1293 |
| MaeI | CTAG | 1 cut(s) | 1598 |
| MaeIII | GTNAC | 1 cut(s) | 679 |
| MalI | GATC | 9 cut(s) | 333, 434, 615, 710, 825, 831, 1012, 1285, 1332 |
| MboI | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| MfeI | CAATTG | 1 cut(s) | 1074 |
| MflI | RGATCY | 1 cut(s) | 1010 |
| MhlI | GDGCHC | 5 cut(s) | 138, 219, 987, 1063, 1444 |
| MlsI | TGGCCA | 1 cut(s) | 950 |
| MluCI | AATT | 9 cut(s) | 391, 414, 936, 944, 992, 1074, 1122, 1255, 1573 |
| MluNI | TGGCCA | 1 cut(s) | 950 |
| MlyI | GAGTC | 4 cut(s) | 533, 562, 803, 1389 |
| MmeI | TCCRAC | 2 cut(s) | 609, 1296 |
| Mox20I | TGGCCA | 1 cut(s) | 950 |
| MroXI | GAANNNNTTC | 1 cut(s) | 511 |
| MscI | TGGCCA | 1 cut(s) | 950 |
| Msp20I | TGGCCA | 1 cut(s) | 950 |
| MspA1I | CMGCKG | 1 cut(s) | 572 |
| MspCI | CTTAAG | 1 cut(s) | 1267 |
| MspI | CCGG | 1 cut(s) | 706 |
| MspR9I | CCNGG | 2 cut(s) | 269, 1445 |
| MunI | CAATTG | 1 cut(s) | 1074 |
| Mva1269I | GAATGC | 2 cut(s) | 973, 1495 |
| MvaI | CCWGG | 2 cut(s) | 269, 1445 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NdeII | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| NlaIII | CATG | 5 cut(s) | 296, 389, 715, 839, 1465 |
| NlaIV | GGNNCC | 3 cut(s) | 402, 1012, 1441 |
| NmuCI | GTSAC | 1 cut(s) | 679 |
| NspI | RCATGY | 1 cut(s) | 389 |
| PaeR7I | CTCGAG | 1 cut(s) | 986 |
| PciI | ACATGT | 1 cut(s) | 385 |
| PciSI | GCTCTTC | 2 cut(s) | 207, 224 |
| PctI | GAATGC | 2 cut(s) | 973, 1495 |
| PdmI | GAANNNNTTC | 1 cut(s) | 511 |
| PfeI | GAWTC | 4 cut(s) | 473, 1150, 1196, 1243 |
| PkrI | GCNGC | 3 cut(s) | 93, 124, 571 |
| PleI | GAGTC | 4 cut(s) | 533, 561, 802, 1388 |
| PpsI | GAGTC | 4 cut(s) | 533, 561, 802, 1388 |
| PpuMI | RGGWCCY | 1 cut(s) | 400 |
| PscI | ACATGT | 1 cut(s) | 385 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1366 |
| PsiI | TTATAA | 2 cut(s) | 782, 1430 |
| Psp124BI | GAGCTC | 3 cut(s) | 219, 987, 1063 |
| Psp5II | RGGWCCY | 1 cut(s) | 400 |
| Psp6I | CCWGG | 2 cut(s) | 267, 1443 |
| PspGI | CCWGG | 2 cut(s) | 267, 1443 |
| PspN4I | GGNNCC | 3 cut(s) | 402, 1012, 1441 |
| PspPI | GGNCC | 3 cut(s) | 271, 400, 715 |
| PspPPI | RGGWCCY | 1 cut(s) | 400 |
| PspXI | VCTCGAGB | 1 cut(s) | 986 |
| PstNI | CAGNNNCTG | 1 cut(s) | 350 |
| PsuI | RGATCY | 1 cut(s) | 1010 |
| PvuII | CAGCTG | 1 cut(s) | 572 |
| RsaI | GTAC | 3 cut(s) | 1455, 1460, 1596 |
| RsaNI | GTAC | 3 cut(s) | 1454, 1459, 1595 |
| SacI | GAGCTC | 3 cut(s) | 219, 987, 1063 |
| SapI | GCTCTTC | 2 cut(s) | 207, 224 |
| SatI | GCNGC | 3 cut(s) | 92, 123, 570 |
| Sau3AI | GATC | 9 cut(s) | 331, 432, 613, 708, 823, 829, 1010, 1283, 1330 |
| Sau96I | GGNCC | 3 cut(s) | 271, 400, 715 |
| SchI | GAGTC | 4 cut(s) | 533, 562, 803, 1389 |
| ScrFI | CCNGG | 2 cut(s) | 269, 1445 |
| SduI | GDGCHC | 5 cut(s) | 138, 219, 987, 1063, 1444 |
| SfaNI | GCATC | 1 cut(s) | 1293 |
| Sfr274I | CTCGAG | 1 cut(s) | 986 |
| SinI | GGWCC | 2 cut(s) | 271, 400 |
| SlaI | CTCGAG | 1 cut(s) | 986 |
| SmlI | CTYRAG | 4 cut(s) | 170, 986, 1267, 1298 |
| SmoI | CTYRAG | 4 cut(s) | 170, 986, 1267, 1298 |
| SpeI | ACTAGT | 1 cut(s) | 1597 |
| Sse9I | AATT | 9 cut(s) | 391, 414, 936, 944, 992, 1074, 1122, 1255, 1573 |
| SsiI | CCGC | 2 cut(s) | 92, 722 |
| SspMI | CTAG | 1 cut(s) | 1598 |
| SstI | GAGCTC | 3 cut(s) | 219, 987, 1063 |
| StyD4I | CCNGG | 2 cut(s) | 267, 1443 |
| TaaI | ACNGT | 6 cut(s) | 58, 145, 152, 430, 1144, 1458 |
| TaqI | TCGA | 1 cut(s) | 987 |
| TasI | AATT | 9 cut(s) | 391, 414, 936, 944, 992, 1074, 1122, 1255, 1573 |
| TatI | WGTACW | 3 cut(s) | 1453, 1458, 1594 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 4 cut(s) | 473, 1150, 1196, 1243 |
| TscAI | CASTG | 9 cut(s) | 52, 157, 442, 540, 592, 688, 826, 1230, 1330 |
| TseFI | GTSAC | 1 cut(s) | 679 |
| TseI | GCWGC | 2 cut(s) | 122, 569 |
| Tsp45I | GTSAC | 1 cut(s) | 679 |
| TspDTI | ATGAA | 6 cut(s) | 86, 281, 456, 470, 575, 855 |
| TspRI | CASTG | 9 cut(s) | 52, 157, 442, 540, 592, 688, 826, 1230, 1330 |
| Vha464I | CTTAAG | 1 cut(s) | 1267 |
| VpaK11BI | GGWCC | 2 cut(s) | 271, 400 |
| XapI | RAATTY | 1 cut(s) | 1573 |
| XceI | RCATGY | 1 cut(s) | 389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 347 |
| XhoI | CTCGAG | 1 cut(s) | 986 |
| XmnI | GAANNNNTTC | 1 cut(s) | 511 |
| XspI | CTAG | 1 cut(s) | 1598 |