Rw7G020730

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0016857
Physical Location & Seq
Reverse (-)
23692752 .. 23694897
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G020730.1

Sequence Viewer

Length: 1494 bp
ATGGGTGTAAAACCCAAGGAAAACCCACCATCTCCAGCCTTCATAGAAACAGTGGAAGAGATCATGAAAATCTACAAGTCACTGCCACCAAGGCCCTCCATTGAAGAGGTTGAAGCAGCCATGTCTGTGCTCAAAACAGTCGACACTGAAGAAGAACAGAGACTTGAGGAGATATCAAAGCAGGTGGTCCCCAAAGATGTCCCTGAAGAACTCTTCTCTGTTTTGCAGCAGGTGAGGAGGACCATGGTCCTGTTTCAGAGCCATGAACAGAGGAGAGAGGCTTCTGAGGTGGTTGAGTTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGCGCTGGTTTCTGGTGACACCCAGAAGGAGAATCATGTTGCTTTTGGGTACCCAGTTGGGGAAATTGTGAGTGAGCCTGGGATTAGTGATGACAGTCTTGTGGTGATGAAGAAGAAGGAAGATGAAGAGTTGAAGATAGATGGTTTCAAGGGTTTGGTGAAGGGTTCTTCCACTATTTCTTCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTTGCAGCTATAATAGAAAACACTGCTAAAAGTGGAGAATTAGTTCTTGATCTTAGAGGCAAATTAGTAGATCAAGTGGAGTGGCTTCCAGTATCACTTGGGAAATTATCAGATGTCACTGAATTGGACTTGTCTGAAAACCGAATCATGGCCATTCCGCCCACCATTGGTGGCCTTAAAGCCTTAACAAAGCTTGACCTCCACTCAAACCAACTCATAAACCTTCCAGACTCATTTGGTGAGTTGAGTAATCTCACGGATCTTGATCTCCATGCAAACAGGTTTAAATCGCTTCCTGCTTCATTCGGAAACTTGATCAACCTCATGAATCTTGATTTGAGTTCAAATAGCTTCACCCGAACTGCCTTCACAATCGGATCCTGCACATCACTGACTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTGCCCGAGGCAATTGGAAAGCTCGAAAACTTGGAGATCCTCACAGTTCACTACAACAGAATCAAAGGGTTGCCAACAACAATTGGGAATCTTAGCAGTTTGAAGGAGCTTGATGTTAGCTTCAACGAACTCGAATCCATACCCGAGAACTTGTGTTTTGCAGTGCGCCTCGAAAAACTGAATGTGTCAAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAAATTAGGCACTTACCACTCTCTTTCAGGTTCTTGTCAAAACTGAAGGTTTTCCGTGCCGATGAAACACCTTTGGAAGTTCCCCCAAGACATGTTATCCAGTTGGGTCCTCAGGCAGTTGTAAAGTACATGGAAGATTATGTTGCCAAGATGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGAAGGGTTTTTGGTTTTGGTTTTGCTCAAAACTCTGCTCCACCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

497

Amino Acids

55.65

Weight (kDa)

5.18

Isoelectric Point (pI)

40.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_4 PF12799 226 - 262 6.4e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 251 - 322 6.2e-08 Leucine-rich repeat region
LRR_8 PF13855 316 - 373 1.2e-08 Leucine rich repeat
LRR_14 PF23598 320 - 389 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 339 - 394 4.7e-07 Leucine rich repeat
LRR_14 PF23598 397 - 441 2.4e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 172, 220
Acc36I ACCTGC 2 cut(s) 172, 220
Acc65I GGTACC 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 1207
AciI CCGC 3 cut(s) 716, 1205, 1207
AclWI GGATC 4 cut(s) 825, 930, 943, 1018
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 1 cut(s) 967
AcuI CTGAAG 4 cut(s) 168, 225, 510, 1322
AfaI GTAC 2 cut(s) 395, 1385
AfiI CCNNNNNNNGG 3 cut(s) 403, 706, 725
AflIII ACRYGT 1 cut(s) 1348
AjnI CCWGG 1 cut(s) 421
AloI GAACNNNNNNTCC 2 cut(s) 585, 617
Alw21I GWGCWC 2 cut(s) 132, 988
Alw26I GTCTC 1 cut(s) 154
AlwI GGATC 4 cut(s) 825, 930, 943, 1018
Ama87I CYCGRG 2 cut(s) 992, 1130
AoxI GGCC 4 cut(s) 92, 325, 708, 730
ApeKI GCWGC 5 cut(s) 116, 226, 563, 958, 1415
ApoI RAATTY 1 cut(s) 967
Asp700I GAANNNNTTC 2 cut(s) 600, 1307
Asp718I GGTACC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 349, 1155
AspS9I GGNCC 5 cut(s) 93, 187, 240, 247, 1364
AsuHPI GGTGA 6 cut(s) 244, 371, 460, 514, 809, 904
AvaI CYCGRG 2 cut(s) 992, 1130
AvaII GGWCC 4 cut(s) 187, 240, 247, 1364
AxyI CCTNAGG 1 cut(s) 1368
BalI TGGCCA 1 cut(s) 710
BamHI GGATCC 1 cut(s) 935
BanI GGYRCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 988
Bbv12I GWGCWC 2 cut(s) 132, 988
BbvI GCAGC 5 cut(s) 128, 238, 575, 945, 1402
BccI CCATC 4 cut(s) 37, 317, 479, 1402
BciT130I CCWGG 1 cut(s) 423
BclI TGATCA 2 cut(s) 873, 1255
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 1 cut(s) 1492
BfuAI ACCTGC 2 cut(s) 172, 220
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 6 cut(s) 117, 227, 564, 959, 1205, 1416
BlsI GCNGC 6 cut(s) 118, 228, 565, 960, 1206, 1417
Bme1390I CCNGG 1 cut(s) 423
Bme18I GGWCC 4 cut(s) 187, 240, 247, 1364
BmeT110I CYCGRG 2 cut(s) 992, 1130
BmgT120I GGNCC 5 cut(s) 93, 187, 240, 247, 1364
BmiI GGNNCC 4 cut(s) 189, 395, 937, 1365
BmrFI CCNGG 1 cut(s) 423
BmrI ACTGGG 1 cut(s) 392
BmsI GCATC 2 cut(s) 1218, 1402
BmuI ACTGGG 1 cut(s) 392
BoxI GACNNNNGTC 1 cut(s) 245
BpmI CTGGAG 1 cut(s) 18
BpuEI CTTGAG 2 cut(s) 185, 1244
BsaBI GATNNNNATC 1 cut(s) 822
BsaJI CCNNGG 6 cut(s) 15, 89, 243, 422, 993, 1205
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 3 cut(s) 403, 706, 725
Bse1I ACTGG 3 cut(s) 398, 647, 1357
Bse21I CCTNAGG 1 cut(s) 1368
Bse8I GATNNNNATC 1 cut(s) 822
BseBI CCWGG 1 cut(s) 423
BseDI CCNNGG 6 cut(s) 15, 89, 243, 422, 993, 1205
BseGI GGATG 1 cut(s) 1417
BseJI GATNNNNATC 1 cut(s) 822
BseLI CCNNNNNNNGG 3 cut(s) 403, 706, 725
BseMII CTCAG 4 cut(s) 276, 528, 945, 1382
BseNI ACTGG 3 cut(s) 398, 647, 1357
BseRI GAGGAG 3 cut(s) 182, 250, 286
BseXI GCAGC 5 cut(s) 128, 238, 575, 945, 1402
BsgI GTGCAG 1 cut(s) 925
Bsh1236I CGCG 1 cut(s) 1207
BshFI GGCC 4 cut(s) 94, 327, 710, 732
BshNI GGYRCC 1 cut(s) 393
BsiHKAI GWGCWC 2 cut(s) 132, 988
BsiHKCI CYCGRG 2 cut(s) 992, 1130
BslFI GGGAC 2 cut(s) 173, 185
BslI CCNNNNNNNGG 3 cut(s) 403, 706, 725
BsmAI GTCTC 1 cut(s) 154
BsmFI GGGAC 2 cut(s) 173, 185
BsnI GGCC 4 cut(s) 94, 327, 710, 732
BsoBI CYCGRG 2 cut(s) 992, 1130
Bsp1286I GDGCHC 2 cut(s) 132, 988
Bsp143I GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 3 cut(s) 716, 1205, 1207
BspANI GGCC 4 cut(s) 94, 327, 710, 732
BspCNI CTCAG 4 cut(s) 277, 529, 946, 1381
BspFNI CGCG 1 cut(s) 1207
BspHI TCATGA 2 cut(s) 63, 882
BspLI GGNNCC 4 cut(s) 189, 395, 937, 1365
BspMI ACCTGC 2 cut(s) 172, 220
BspPI GGATC 4 cut(s) 825, 930, 943, 1018
BspT107I GGYRCC 1 cut(s) 393
BsrI ACTGG 3 cut(s) 398, 647, 1357
BssECI CCNNGG 6 cut(s) 15, 89, 243, 422, 993, 1205
BssMI GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
BssT1I CCWWGG 3 cut(s) 15, 89, 243
Bst2UI CCWGG 1 cut(s) 423
Bst4CI ACNGT 4 cut(s) 52, 139, 440, 1033
Bst6I CTCTTC 5 cut(s) 51, 99, 218, 465, 1230
BstDEI CTNAG 7 cut(s) 285, 537, 611, 954, 980, 1079, 1368
BstDSI CCRYGG 2 cut(s) 243, 1205
BstF5I GGATG 1 cut(s) 1417
BstFNI CGCG 1 cut(s) 1207
BstHHI GCGC 2 cut(s) 349, 1155
BstKTI GATC 9 cut(s) 63, 610, 631, 820, 826, 876, 938, 1026, 1258
BstMAI GTCTC 1 cut(s) 154
BstMBI GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstNI CCWGG 1 cut(s) 423
BstNSI RCATGY 1 cut(s) 1352
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 1 cut(s) 421
BstUI CGCG 1 cut(s) 1207
BstV1I GCAGC 5 cut(s) 128, 238, 575, 945, 1402
BstX2I RGATCY 3 cut(s) 817, 935, 1023
BstYI RGATCY 3 cut(s) 817, 935, 1023
Bsu36I CCTNAGG 1 cut(s) 1368
BsuRI GGCC 4 cut(s) 94, 327, 710, 732
BtgI CCRYGG 2 cut(s) 243, 1205
BtsCI GGATG 1 cut(s) 1417
BtsI GCAGTG 3 cut(s) 80, 579, 1155
BtsIMutI CAGTG 8 cut(s) 57, 80, 144, 579, 675, 947, 1155, 1255
BveI ACCTGC 2 cut(s) 172, 220
CciI TCATGA 2 cut(s) 63, 882
CfoI GCGC 2 cut(s) 349, 1155
Cfr13I GGNCC 5 cut(s) 93, 187, 240, 247, 1364
Cfr42I CCGCGG 1 cut(s) 1208
Csp6I GTAC 2 cut(s) 394, 1384
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 620, 655
CviQI GTAC 2 cut(s) 394, 1384
DdeI CTNAG 7 cut(s) 285, 537, 611, 954, 980, 1079, 1368
DpnI GATC 9 cut(s) 62, 609, 630, 819, 825, 875, 937, 1025, 1257
DpnII GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
DraI TTTAAA 1 cut(s) 844
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 5 cut(s) 51, 99, 218, 465, 1230
EarI CTCTTC 5 cut(s) 51, 99, 218, 465, 1230
EciI GGCGGA 1 cut(s) 705
Ecl136II GAGCTC 1 cut(s) 986
Eco130I CCWWGG 3 cut(s) 15, 89, 243
Eco24I GRGCYC 1 cut(s) 988
Eco32I GATATC 2 cut(s) 174, 1246
Eco47I GGWCC 4 cut(s) 187, 240, 247, 1364
Eco53kI GAGCTC 1 cut(s) 986
Eco57I CTGAAG 4 cut(s) 168, 225, 510, 1322
Eco81I CCTNAGG 1 cut(s) 1368
Eco88I CYCGRG 2 cut(s) 992, 1130
EcoICRI GAGCTC 1 cut(s) 986
EcoO109I RGGNCCY 2 cut(s) 93, 1364
EcoRII CCWGG 1 cut(s) 421
EcoRV GATATC 2 cut(s) 174, 1246
EcoT14I CCWWGG 3 cut(s) 15, 89, 243
EcoT38I GRGCYC 1 cut(s) 988
ErhI CCWWGG 3 cut(s) 15, 89, 243
FaqI GGGAC 2 cut(s) 173, 185
FbaI TGATCA 2 cut(s) 873, 1255
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 117, 227, 564, 959, 1205, 1416
FokI GGATG 1 cut(s) 1424
FriOI GRGCYC 1 cut(s) 988
Fsp4HI GCNGC 6 cut(s) 117, 227, 564, 959, 1205, 1416
FspBI CTAG 1 cut(s) 1492
GlaI GCGC 2 cut(s) 348, 1154
GluI GCNGC 6 cut(s) 117, 227, 564, 959, 1205, 1416
GsuI CTGGAG 1 cut(s) 18
HaeIII GGCC 4 cut(s) 94, 327, 710, 732
HhaI GCGC 2 cut(s) 349, 1155
Hin6I GCGC 2 cut(s) 347, 1153
HinP1I GCGC 2 cut(s) 347, 1153
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 8 cut(s) 376, 533, 702, 788, 886, 1047, 1075, 1121
HphI GGTGA 6 cut(s) 244, 371, 460, 514, 809, 904
Hpy166II GTNNAC 2 cut(s) 142, 1036
Hpy188I TCNGA 9 cut(s) 258, 286, 315, 336, 538, 670, 694, 866, 935
Hpy188III TCNNGA 8 cut(s) 64, 528, 605, 785, 821, 883, 890, 1223
Hpy8I GTNNAC 2 cut(s) 142, 1036
HpyCH4III ACNGT 4 cut(s) 52, 139, 440, 1033
HpyCH4V TGCA 7 cut(s) 226, 563, 833, 942, 961, 1148, 1418
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
HpyF3I CTNAG 7 cut(s) 285, 537, 611, 954, 980, 1079, 1368
HspAI GCGC 2 cut(s) 347, 1153
KpnI GGTACC 1 cut(s) 397
Ksp22I TGATCA 2 cut(s) 873, 1255
KspI CCGCGG 1 cut(s) 1208
Kzo9I GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
LmnI GCTCC 2 cut(s) 1093, 1484
Lsp1109I GCAGC 5 cut(s) 128, 238, 575, 945, 1402
LweI GCATC 2 cut(s) 1218, 1402
MaeI CTAG 1 cut(s) 1492
MaeIII GTNAC 3 cut(s) 78, 359, 673
MalI GATC 9 cut(s) 62, 609, 630, 819, 825, 875, 937, 1025, 1257
MboI GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
MfeI CAATTG 3 cut(s) 999, 1068, 1212
MflI RGATCY 3 cut(s) 817, 935, 1023
MhlI GDGCHC 2 cut(s) 132, 988
MlsI TGGCCA 1 cut(s) 710
MluNI TGGCCA 1 cut(s) 710
MlyI GAGTC 2 cut(s) 542, 782
MmeI TCCRAC 1 cut(s) 1221
Mox20I TGGCCA 1 cut(s) 710
MroXI GAANNNNTTC 2 cut(s) 600, 1307
MscI TGGCCA 1 cut(s) 710
MseI TTAA 4 cut(s) 545, 735, 743, 843
MslI CAYNNNNRTG 1 cut(s) 125
Msp20I TGGCCA 1 cut(s) 710
MspA1I CMGCKG 1 cut(s) 1207
MspR9I CCNGG 1 cut(s) 423
MunI CAATTG 3 cut(s) 999, 1068, 1212
MvaI CCWGG 1 cut(s) 423
MvnI CGCG 1 cut(s) 1207
MwoI GCNNNNNNNGC 1 cut(s) 91
NcoI CCATGG 1 cut(s) 243
NdeII GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
NlaIV GGNNCC 4 cut(s) 189, 395, 937, 1365
NmuCI GTSAC 3 cut(s) 78, 359, 673
NspI RCATGY 1 cut(s) 1352
PagI TCATGA 2 cut(s) 63, 882
PaqCI CACCTGC 2 cut(s) 172, 220
PciI ACATGT 1 cut(s) 1348
PdmI GAANNNNTTC 2 cut(s) 600, 1307
PfeI GAWTC 6 cut(s) 376, 702, 886, 1047, 1075, 1121
PkrI GCNGC 6 cut(s) 118, 228, 565, 960, 1206, 1417
PleI GAGTC 2 cut(s) 541, 782
PpsI GAGTC 2 cut(s) 541, 782
PpuMI RGGWCCY 1 cut(s) 1364
PscI ACATGT 1 cut(s) 1348
PshAI GACNNNNGTC 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 988
Psp5II RGGWCCY 1 cut(s) 1364
Psp6I CCWGG 1 cut(s) 421
PspGI CCWGG 1 cut(s) 421
PspN4I GGNNCC 4 cut(s) 189, 395, 937, 1365
PspPI GGNCC 5 cut(s) 93, 187, 240, 247, 1364
PspPPI RGGWCCY 1 cut(s) 1364
PsuI RGATCY 3 cut(s) 817, 935, 1023
RsaI GTAC 2 cut(s) 395, 1385
RsaNI GTAC 2 cut(s) 394, 1384
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 988
SacII CCGCGG 1 cut(s) 1208
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 545, 735, 743, 843
SatI GCNGC 6 cut(s) 117, 227, 564, 959, 1205, 1416
Sau3AI GATC 9 cut(s) 60, 607, 628, 817, 823, 873, 935, 1023, 1255
Sau96I GGNCC 5 cut(s) 93, 187, 240, 247, 1364
SchI GAGTC 2 cut(s) 542, 782
ScrFI CCNGG 1 cut(s) 423
SduI GDGCHC 2 cut(s) 132, 988
SfaNI GCATC 2 cut(s) 1218, 1402
Sfr303I CCGCGG 1 cut(s) 1208
SgrBI CCGCGG 1 cut(s) 1208
SinI GGWCC 4 cut(s) 187, 240, 247, 1364
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 2 cut(s) 164, 1223
SmoI CTYRAG 2 cut(s) 164, 1223
SsiI CCGC 3 cut(s) 716, 1205, 1207
SspMI CTAG 1 cut(s) 1492
SstI GAGCTC 1 cut(s) 988
StyD4I CCNGG 1 cut(s) 421
StyI CCWWGG 3 cut(s) 15, 89, 243
TaaI ACNGT 4 cut(s) 52, 139, 440, 1033
TaqI TCGA 4 cut(s) 141, 1011, 1119, 1158
TatI WGTACW 1 cut(s) 1383
TauI GCSGC 1 cut(s) 1207
TfiI GAWTC 6 cut(s) 376, 702, 886, 1047, 1075, 1121
Tru1I TTAA 4 cut(s) 545, 735, 743, 843
Tru9I TTAA 4 cut(s) 545, 735, 743, 843
TscAI CASTG 8 cut(s) 57, 87, 151, 586, 682, 954, 1155, 1255
TseFI GTSAC 3 cut(s) 78, 359, 673
TseI GCWGC 5 cut(s) 116, 226, 563, 958, 1415
Tsp45I GTSAC 3 cut(s) 78, 359, 673
TspDTI ATGAA 9 cut(s) 31, 80, 279, 467, 483, 569, 849, 899, 1335
TspGWI ACGGA 2 cut(s) 830, 1301
TspRI CASTG 8 cut(s) 57, 87, 151, 586, 682, 954, 1155, 1255
VpaK11BI GGWCC 4 cut(s) 187, 240, 247, 1364
XapI RAATTY 1 cut(s) 967
XceI RCATGY 1 cut(s) 1352
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 600, 1307
XspI CTAG 1 cut(s) 1492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.