Plant intracellular Ras-group-related LRR protein 5-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21720 |
| malus_domestica | MD06G1032200.v1.1 |
| prunus_persica | Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0209221 |
| rosa_laevigata | RLG00000003156 |
| rosa_multiflora | Rmu_sc0001701.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00249620 |
| rosa_rugosa | Rorug07G0110400 |
| rosa_samantha | Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200 |
| rosa_wichuraiana | Rw7G020730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 92 |
| AcuI | CTGAAG | 1 cut(s) | 231 |
| AflIII | ACRYGT | 1 cut(s) | 385 |
| AgsI | TTSAA | 3 cut(s) | 110, 119, 528 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| AluBI | AGCT | 3 cut(s) | 169, 217, 347 |
| AluI | AGCT | 3 cut(s) | 169, 217, 347 |
| Alw21I | GWGCWC | 2 cut(s) | 138, 219 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 350 |
| ApeKI | GCWGC | 1 cut(s) | 122 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 511 |
| AspS9I | GGNCC | 2 cut(s) | 271, 400 |
| AsuHPI | GGTGA | 3 cut(s) | 250, 377, 514 |
| AvaII | GGWCC | 2 cut(s) | 271, 400 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 360, 393 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| BbsI | GAAGAC | 2 cut(s) | 30, 516 |
| Bbv12I | GWGCWC | 2 cut(s) | 138, 219 |
| BbvI | GCAGC | 1 cut(s) | 134 |
| BccI | CCATC | 3 cut(s) | 43, 298, 479 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BisI | GCNGC | 2 cut(s) | 92, 123 |
| BlsI | GCNGC | 2 cut(s) | 93, 124 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| Bme18I | GGWCC | 2 cut(s) | 271, 400 |
| BmgT120I | GGNCC | 2 cut(s) | 271, 400 |
| BmiI | GGNNCC | 1 cut(s) | 402 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| BmrI | ACTGGG | 1 cut(s) | 398 |
| BmuI | ACTGGG | 1 cut(s) | 398 |
| BpiI | GAAGAC | 2 cut(s) | 30, 516 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 206, 238 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 299, 329 |
| Bse1I | ACTGG | 2 cut(s) | 45, 404 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseMII | CTCAG | 1 cut(s) | 386 |
| BseNI | ACTGG | 2 cut(s) | 45, 404 |
| BseRI | GAGGAG | 2 cut(s) | 170, 188 |
| BseXI | GCAGC | 1 cut(s) | 134 |
| BsiHKAI | GWGCWC | 2 cut(s) | 138, 219 |
| BslFI | GGGAC | 2 cut(s) | 70, 191 |
| BsmFI | GGGAC | 2 cut(s) | 70, 191 |
| Bsp1286I | GDGCHC | 2 cut(s) | 138, 219 |
| Bsp143I | GATC | 1 cut(s) | 331 |
| BspACI | CCGC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 385 |
| BspLI | GGNNCC | 1 cut(s) | 402 |
| BspQI | GCTCTTC | 2 cut(s) | 207, 224 |
| BsrI | ACTGG | 2 cut(s) | 45, 404 |
| BssMI | GATC | 1 cut(s) | 331 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 5 cut(s) | 58, 133, 145, 152, 430 |
| Bst6I | CTCTTC | 3 cut(s) | 105, 207, 224 |
| BstDEI | CTNAG | 1 cut(s) | 372 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstKTI | GATC | 1 cut(s) | 334 |
| BstMBI | GATC | 1 cut(s) | 331 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstNSI | RCATGY | 1 cut(s) | 389 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstV1I | GCAGC | 1 cut(s) | 134 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 516 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| BtsIMutI | CAGTG | 2 cut(s) | 52, 157 |
| CaiI | CAGNNNCTG | 1 cut(s) | 350 |
| Cfr13I | GGNCC | 2 cut(s) | 271, 400 |
| CviAII | CATG | 2 cut(s) | 293, 386 |
| CviJI | RGCY | 8 cut(s) | 13, 125, 169, 196, 217, 267, 287, 347 |
| CviKI_1 | RGCY | 8 cut(s) | 13, 125, 169, 196, 217, 267, 287, 347 |
| DdeI | CTNAG | 1 cut(s) | 372 |
| DpnI | GATC | 1 cut(s) | 333 |
| DpnII | GATC | 1 cut(s) | 331 |
| Eam1104I | CTCTTC | 3 cut(s) | 105, 207, 224 |
| EarI | CTCTTC | 3 cut(s) | 105, 207, 224 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco32I | GATATC | 1 cut(s) | 180 |
| Eco47I | GGWCC | 2 cut(s) | 271, 400 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| Eco57I | CTGAAG | 1 cut(s) | 231 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| EcoRV | GATATC | 1 cut(s) | 180 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| FaeI | CATG | 2 cut(s) | 296, 389 |
| FaiI | YATR | 3 cut(s) | 251, 294, 387 |
| FaqI | GGGAC | 2 cut(s) | 70, 191 |
| FatI | CATG | 2 cut(s) | 292, 385 |
| Fnu4HI | GCNGC | 2 cut(s) | 92, 123 |
| FokI | GGATG | 1 cut(s) | 22 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 2 cut(s) | 92, 123 |
| GluI | GCNGC | 2 cut(s) | 92, 123 |
| Hin1II | CATG | 2 cut(s) | 296, 389 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HindIII | AAGCTT | 1 cut(s) | 167 |
| HinfI | GANTC | 1 cut(s) | 473 |
| HphI | GGTGA | 3 cut(s) | 250, 377, 514 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 5 cut(s) | 264, 321, 381, 478, 555 |
| Hpy188III | TCNNGA | 1 cut(s) | 340 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| HpyAV | CCTTC | 2 cut(s) | 229, 454 |
| HpyCH4III | ACNGT | 5 cut(s) | 58, 133, 145, 152, 430 |
| HpyCH4V | TGCA | 1 cut(s) | 232 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 1 cut(s) | 372 |
| Hsp92II | CATG | 2 cut(s) | 296, 389 |
| Kzo9I | GATC | 1 cut(s) | 331 |
| LguI | GCTCTTC | 2 cut(s) | 207, 224 |
| Lsp1109I | GCAGC | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 333 |
| MboI | GATC | 1 cut(s) | 331 |
| MhlI | GDGCHC | 2 cut(s) | 138, 219 |
| MluCI | AATT | 2 cut(s) | 391, 414 |
| MroXI | GAANNNNTTC | 1 cut(s) | 511 |
| MseI | TTAA | 2 cut(s) | 390, 492 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NdeII | GATC | 1 cut(s) | 331 |
| NlaIII | CATG | 2 cut(s) | 296, 389 |
| NlaIV | GGNNCC | 1 cut(s) | 402 |
| NspI | RCATGY | 1 cut(s) | 389 |
| PciI | ACATGT | 1 cut(s) | 385 |
| PciSI | GCTCTTC | 2 cut(s) | 207, 224 |
| PdmI | GAANNNNTTC | 1 cut(s) | 511 |
| PfeI | GAWTC | 1 cut(s) | 473 |
| PkrI | GCNGC | 2 cut(s) | 93, 124 |
| PpuMI | RGGWCCY | 1 cut(s) | 400 |
| PscI | ACATGT | 1 cut(s) | 385 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| Psp5II | RGGWCCY | 1 cut(s) | 400 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 1 cut(s) | 402 |
| PspPI | GGNCC | 2 cut(s) | 271, 400 |
| PspPPI | RGGWCCY | 1 cut(s) | 400 |
| PstNI | CAGNNNCTG | 1 cut(s) | 350 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 2 cut(s) | 207, 224 |
| SaqAI | TTAA | 2 cut(s) | 390, 492 |
| SatI | GCNGC | 2 cut(s) | 92, 123 |
| Sau3AI | GATC | 1 cut(s) | 331 |
| Sau96I | GGNCC | 2 cut(s) | 271, 400 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SduI | GDGCHC | 2 cut(s) | 138, 219 |
| SetI | ASST | 7 cut(s) | 117, 171, 219, 240, 326, 349, 378 |
| SinI | GGWCC | 2 cut(s) | 271, 400 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| Sse9I | AATT | 2 cut(s) | 391, 414 |
| SsiI | CCGC | 1 cut(s) | 92 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaaI | ACNGT | 5 cut(s) | 58, 133, 145, 152, 430 |
| TasI | AATT | 2 cut(s) | 391, 414 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 1 cut(s) | 473 |
| Tru1I | TTAA | 2 cut(s) | 390, 492 |
| Tru9I | TTAA | 2 cut(s) | 390, 492 |
| TscAI | CASTG | 2 cut(s) | 52, 157 |
| TseI | GCWGC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 4 cut(s) | 86, 281, 456, 470 |
| TspRI | CASTG | 2 cut(s) | 52, 157 |
| VpaK11BI | GGWCC | 2 cut(s) | 271, 400 |
| XceI | RCATGY | 1 cut(s) | 389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 347 |
| XmnI | GAANNNNTTC | 1 cut(s) | 511 |