RchiOBHm_Chr7g0209221

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0016857
Physical Location & Seq
Reverse (-)
26576180 .. 26578576
2397 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18725

Sequence Viewer

Length: 1572 bp
ATGGGTGTAAAACCCAAGGAAAACCCACCATCCCCAGCCTTCATAGAAACAGTGGAAGAGATCATGAAAATCTACAAGTCACTGCCACCAAGGCCTTCCATTGAAGAGGTTGAAGCAGCCATGTCTGTGCTCAAAACAGTCGACACTGAAGAAGAACAGAGACTTGAGGAGATATCAAAGCAGGTGGTCCCCAAAGATGTCCCTGAAGAACTCTTCACTGTTTTGCAGCAGGTGAGGAGGACCATGGTCCTGTTTCAGAGCCATGAACAGAGGAGAGAGGCTTCTGAGGTGGTTGAGTTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGCGCTGGTTTCTGGTGACACCCAGGAGGAGAATCATGTTGCTTTTGGGTACCCAGTTGGGGAAATTGTGAGTGAGCCTGGGATTAGTGATGACAGTCTTGTGGGGATGAAGAAGAAGAAGAAGAAGGAAGATGAAGAGTTGAAGATAGATGGTTTCAAGGGTTTGGTGAAGGGTTCTTCCACTATTTCTTCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTTGCAGCTATAATAGAAAACACTGCTAAAAGTGGAGAATTAGTTCTTGATCTTAGAGGCAAATTAGTAGATCAAGTGGAGTGGCTTCCAGTATCACTTGGGAAATTATCAGATGTCACTGAATTGGACTTGTCCGAAAACCGAATCATGGCCATTCCGCCCACCATTAGTGGCCTTAAAGCCTTAACAAAGCTTGACCTCCACTCAAACCAACTCATAAACCTTCCAGACTCATTTGGTGAGTTGAGTAATCTCACGGATCTTGATCTCCATGCAAACAGATTTAAATCGCTTCCTGCTTCATTCGGAAACTTGATCAACCTCATGAATCTTGATTTGAGTTCAAATAGCTTCACCCGTTTGCCTGATGTAATTGGGAAGCTGATCAGCTTGAAGACATTGACTGCTGAAACAAATGATCTTGAGGAACTGCCTTTCACAATCGGATCCTGCACATCACTCGCTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTGCCCGAGGCAATTGGAAAGCTCGTAAACTTGGAGATCCTCACAGTTCACTACAACAGAATCAAAGGGTTGCCAACAACAATTGGGAATCTTAGCAGTTTGAAGGAGCTTGATGTTAGCTTCAACGAACTCGAATCCATACCCGAGAACTTGTGTTTTGCAGTGCGCCTCGAAAAACTGAATGTGTCAAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAAATTAGGCACTTACCACTCTCTTTCAGGTTCTTGTCAAAACTGAAGGTTTTCCGTGCCGATGAAACACCTTTGGAAGTTCCCCCAAGACATGTTATCCAGTTGGGTCCTCAGGCAGTTGTAAAGTACATGGAAGATTATGTTGCCAAGATGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGAAGGGTTTTTGGTTTTGGTTTTGCTCAAAACTCTGCTCCACCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

523

Amino Acids

58.51

Weight (kDa)

5.17

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 214 - 280 2.4e-06 Leucine-rich repeat region
LRR_8 PF13855 228 - 284 6.1e-10 Leucine rich repeat
LRR_4 PF12799 229 - 265 5.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 254 - 325 1e-10 Leucine-rich repeat region
LRR_8 PF13855 272 - 330 3.8e-07 Leucine rich repeat
LRR_14 PF23598 315 - 417 6.2e-11 Leucine-rich repeat region
LRR_8 PF13855 342 - 399 8.3e-08 Leucine rich repeat
LRR_8 PF13855 365 - 420 8.2e-07 Leucine rich repeat
LRR_14 PF23598 423 - 467 2.7e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 172, 220
Acc36I ACCTGC 2 cut(s) 172, 220
Acc65I GGTACC 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 1285
AciI CCGC 3 cut(s) 725, 1283, 1285
AclWI GGATC 4 cut(s) 834, 1008, 1021, 1096
AcoI YGGCCR 1 cut(s) 717
AcsI RAATTY 1 cut(s) 1045
AcuI CTGAAG 4 cut(s) 168, 225, 519, 1400
AfaI GTAC 2 cut(s) 395, 1463
AfiI CCNNNNNNNGG 2 cut(s) 403, 715
AflIII ACRYGT 1 cut(s) 1426
AjnI CCWGG 2 cut(s) 366, 421
AloI GAACNNNNNNTCC 2 cut(s) 594, 626
Alw21I GWGCWC 2 cut(s) 132, 1066
Alw26I GTCTC 1 cut(s) 154
AlwI GGATC 4 cut(s) 834, 1008, 1021, 1096
Ama87I CYCGRG 2 cut(s) 1070, 1208
AoxI GGCC 4 cut(s) 92, 325, 717, 739
ApeKI GCWGC 5 cut(s) 116, 226, 572, 1036, 1493
ApoI RAATTY 1 cut(s) 1045
Asp700I GAANNNNTTC 2 cut(s) 609, 1385
Asp718I GGTACC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 349, 1233
AspS9I GGNCC 4 cut(s) 187, 240, 247, 1442
AsuHPI GGTGA 5 cut(s) 244, 371, 523, 818, 913
AvaI CYCGRG 2 cut(s) 1070, 1208
AvaII GGWCC 4 cut(s) 187, 240, 247, 1442
AxyI CCTNAGG 1 cut(s) 1446
BalI TGGCCA 1 cut(s) 719
BamHI GGATCC 1 cut(s) 1013
BanI GGYRCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 1066
BbsI GAAGAC 1 cut(s) 968
Bbv12I GWGCWC 2 cut(s) 132, 1066
BbvI GCAGC 5 cut(s) 128, 238, 584, 1023, 1480
BccI CCATC 4 cut(s) 37, 317, 488, 1480
BcgI CGANNNNNNTGC 2 cut(s) 1009, 1043
BciT130I CCWGG 2 cut(s) 368, 423
BclI TGATCA 3 cut(s) 882, 951, 1333
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 1 cut(s) 1570
BfuAI ACCTGC 2 cut(s) 172, 220
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 6 cut(s) 117, 227, 573, 1037, 1283, 1494
BlpI GCTNAGC 1 cut(s) 1032
BlsI GCNGC 6 cut(s) 118, 228, 574, 1038, 1284, 1495
Bme1390I CCNGG 2 cut(s) 368, 423
Bme18I GGWCC 4 cut(s) 187, 240, 247, 1442
BmeT110I CYCGRG 2 cut(s) 1070, 1208
BmgT120I GGNCC 4 cut(s) 187, 240, 247, 1442
BmiI GGNNCC 4 cut(s) 189, 395, 1015, 1443
BmrFI CCNGG 2 cut(s) 368, 423
BmrI ACTGGG 1 cut(s) 392
BmsI GCATC 2 cut(s) 1296, 1480
BmuI ACTGGG 1 cut(s) 392
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 968
Bpu1102I GCTNAGC 1 cut(s) 1032
BpuEI CTTGAG 3 cut(s) 185, 1010, 1322
BsaBI GATNNNNATC 2 cut(s) 831, 853
BsaJI CCNNGG 7 cut(s) 15, 89, 243, 366, 422, 1071, 1283
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 403, 715
Bse1I ACTGG 3 cut(s) 398, 656, 1435
Bse21I CCTNAGG 1 cut(s) 1446
Bse8I GATNNNNATC 2 cut(s) 831, 853
BseBI CCWGG 2 cut(s) 368, 423
BseDI CCNNGG 7 cut(s) 15, 89, 243, 366, 422, 1071, 1283
BseGI GGATG 3 cut(s) 29, 456, 1495
BseJI GATNNNNATC 2 cut(s) 831, 853
BseLI CCNNNNNNNGG 2 cut(s) 403, 715
BseMII CTCAG 4 cut(s) 276, 537, 1023, 1460
BseNI ACTGG 3 cut(s) 398, 656, 1435
BseRI GAGGAG 4 cut(s) 182, 250, 286, 386
BseXI GCAGC 5 cut(s) 128, 238, 584, 1023, 1480
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 1003
Bsh1236I CGCG 1 cut(s) 1285
BshFI GGCC 4 cut(s) 94, 327, 719, 741
BshNI GGYRCC 1 cut(s) 393
BsiHKAI GWGCWC 2 cut(s) 132, 1066
BsiHKCI CYCGRG 2 cut(s) 1070, 1208
BslFI GGGAC 2 cut(s) 173, 185
BslI CCNNNNNNNGG 2 cut(s) 403, 715
BsmAI GTCTC 1 cut(s) 154
BsmFI GGGAC 2 cut(s) 173, 185
BsnI GGCC 4 cut(s) 94, 327, 719, 741
BsoBI CYCGRG 2 cut(s) 1070, 1208
Bsp1286I GDGCHC 2 cut(s) 132, 1066
Bsp1720I GCTNAGC 1 cut(s) 1032
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 3 cut(s) 725, 1283, 1285
BspANI GGCC 4 cut(s) 94, 327, 719, 741
BspCNI CTCAG 4 cut(s) 277, 538, 1024, 1459
BspFNI CGCG 1 cut(s) 1285
BspHI TCATGA 2 cut(s) 63, 891
BspLI GGNNCC 4 cut(s) 189, 395, 1015, 1443
BspMI ACCTGC 2 cut(s) 172, 220
BspPI GGATC 4 cut(s) 834, 1008, 1021, 1096
BspT107I GGYRCC 1 cut(s) 393
BsrI ACTGG 3 cut(s) 398, 656, 1435
BssECI CCNNGG 7 cut(s) 15, 89, 243, 366, 422, 1071, 1283
BssT1I CCWWGG 3 cut(s) 15, 89, 243
Bst2UI CCWGG 2 cut(s) 368, 423
Bst4CI ACNGT 5 cut(s) 52, 139, 220, 440, 1111
Bst6I CTCTTC 5 cut(s) 51, 99, 218, 474, 1308
BstDEI CTNAG 7 cut(s) 285, 546, 620, 1032, 1058, 1157, 1446
BstDSI CCRYGG 2 cut(s) 243, 1283
BstF5I GGATG 3 cut(s) 29, 456, 1495
BstFNI CGCG 1 cut(s) 1285
BstHHI GCGC 2 cut(s) 349, 1233
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstNI CCWGG 2 cut(s) 368, 423
BstNSI RCATGY 1 cut(s) 1430
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 2 cut(s) 366, 421
BstUI CGCG 1 cut(s) 1285
BstV1I GCAGC 5 cut(s) 128, 238, 584, 1023, 1480
BstV2I GAAGAC 1 cut(s) 968
BstX2I RGATCY 3 cut(s) 826, 1013, 1101
BstYI RGATCY 3 cut(s) 826, 1013, 1101
Bsu36I CCTNAGG 1 cut(s) 1446
BsuRI GGCC 4 cut(s) 94, 327, 719, 741
BtgI CCRYGG 2 cut(s) 243, 1283
BtsCI GGATG 3 cut(s) 29, 456, 1495
BtsI GCAGTG 3 cut(s) 80, 588, 1233
BtsIMutI CAGTG 8 cut(s) 57, 80, 144, 216, 588, 684, 1233, 1333
BveI ACCTGC 2 cut(s) 172, 220
CciI TCATGA 2 cut(s) 63, 891
CfoI GCGC 2 cut(s) 349, 1233
Cfr13I GGNCC 4 cut(s) 187, 240, 247, 1442
Cfr42I CCGCGG 1 cut(s) 1286
Csp6I GTAC 2 cut(s) 394, 1462
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 629, 664
CviQI GTAC 2 cut(s) 394, 1462
DdeI CTNAG 7 cut(s) 285, 546, 620, 1032, 1058, 1157, 1446
DraI TTTAAA 1 cut(s) 853
EaeI YGGCCR 1 cut(s) 717
Eam1104I CTCTTC 5 cut(s) 51, 99, 218, 474, 1308
EarI CTCTTC 5 cut(s) 51, 99, 218, 474, 1308
EciI GGCGGA 1 cut(s) 714
Ecl136II GAGCTC 1 cut(s) 1064
Eco130I CCWWGG 3 cut(s) 15, 89, 243
Eco147I AGGCCT 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 1066
Eco32I GATATC 2 cut(s) 174, 1324
Eco47I GGWCC 4 cut(s) 187, 240, 247, 1442
Eco53kI GAGCTC 1 cut(s) 1064
Eco57I CTGAAG 4 cut(s) 168, 225, 519, 1400
Eco81I CCTNAGG 1 cut(s) 1446
Eco88I CYCGRG 2 cut(s) 1070, 1208
EcoICRI GAGCTC 1 cut(s) 1064
EcoO109I RGGNCCY 1 cut(s) 1442
EcoRII CCWGG 2 cut(s) 366, 421
EcoRV GATATC 2 cut(s) 174, 1324
EcoT14I CCWWGG 3 cut(s) 15, 89, 243
EcoT38I GRGCYC 1 cut(s) 1066
ErhI CCWWGG 3 cut(s) 15, 89, 243
FaqI GGGAC 2 cut(s) 173, 185
FbaI TGATCA 3 cut(s) 882, 951, 1333
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 117, 227, 573, 1037, 1283, 1494
FokI GGATG 3 cut(s) 16, 463, 1502
FriOI GRGCYC 1 cut(s) 1066
Fsp4HI GCNGC 6 cut(s) 117, 227, 573, 1037, 1283, 1494
FspBI CTAG 1 cut(s) 1570
GlaI GCGC 2 cut(s) 348, 1232
GluI GCNGC 6 cut(s) 117, 227, 573, 1037, 1283, 1494
GsaI CCCAGC 1 cut(s) 38
HaeIII GGCC 4 cut(s) 94, 327, 719, 741
HhaI GCGC 2 cut(s) 349, 1233
Hin6I GCGC 2 cut(s) 347, 1231
HinP1I GCGC 2 cut(s) 347, 1231
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 8 cut(s) 376, 542, 711, 797, 895, 1125, 1153, 1199
HphI GGTGA 5 cut(s) 244, 371, 523, 818, 913
Hpy166II GTNNAC 3 cut(s) 142, 1093, 1114
Hpy188I TCNGA 9 cut(s) 258, 286, 315, 336, 547, 679, 703, 875, 1013
Hpy188III TCNNGA 9 cut(s) 64, 537, 614, 794, 830, 892, 899, 989, 1301
Hpy8I GTNNAC 3 cut(s) 142, 1093, 1114
HpyAV CCTTC 9 cut(s) 49, 105, 463, 508, 559, 800, 1162, 1375, 1516
HpyCH4III ACNGT 5 cut(s) 52, 139, 220, 440, 1111
HpyCH4V TGCA 7 cut(s) 226, 572, 842, 1020, 1039, 1226, 1496
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
HpyF3I CTNAG 7 cut(s) 285, 546, 620, 1032, 1058, 1157, 1446
HspAI GCGC 2 cut(s) 347, 1231
KpnI GGTACC 1 cut(s) 397
Ksp22I TGATCA 3 cut(s) 882, 951, 1333
KspI CCGCGG 1 cut(s) 1286
LmnI GCTCC 2 cut(s) 1171, 1562
Lsp1109I GCAGC 5 cut(s) 128, 238, 584, 1023, 1480
LweI GCATC 2 cut(s) 1296, 1480
MaeI CTAG 1 cut(s) 1570
MaeIII GTNAC 3 cut(s) 78, 359, 682
MfeI CAATTG 3 cut(s) 1077, 1146, 1290
MflI RGATCY 3 cut(s) 826, 1013, 1101
MhlI GDGCHC 2 cut(s) 132, 1066
MlsI TGGCCA 1 cut(s) 719
MluNI TGGCCA 1 cut(s) 719
MlyI GAGTC 2 cut(s) 551, 791
MmeI TCCRAC 1 cut(s) 1299
Mox20I TGGCCA 1 cut(s) 719
MroXI GAANNNNTTC 2 cut(s) 609, 1385
MscI TGGCCA 1 cut(s) 719
MseI TTAA 4 cut(s) 554, 744, 752, 852
MslI CAYNNNNRTG 1 cut(s) 125
Msp20I TGGCCA 1 cut(s) 719
MspA1I CMGCKG 1 cut(s) 1285
MspR9I CCNGG 2 cut(s) 368, 423
MunI CAATTG 3 cut(s) 1077, 1146, 1290
MvaI CCWGG 2 cut(s) 368, 423
MvnI CGCG 1 cut(s) 1285
MwoI GCNNNNNNNGC 1 cut(s) 91
NcoI CCATGG 1 cut(s) 243
NlaIV GGNNCC 4 cut(s) 189, 395, 1015, 1443
NmuCI GTSAC 3 cut(s) 78, 359, 682
NspI RCATGY 1 cut(s) 1430
PagI TCATGA 2 cut(s) 63, 891
PaqCI CACCTGC 2 cut(s) 172, 220
PceI AGGCCT 1 cut(s) 94
PciI ACATGT 1 cut(s) 1426
PdmI GAANNNNTTC 2 cut(s) 609, 1385
PfeI GAWTC 6 cut(s) 376, 711, 895, 1125, 1153, 1199
PkrI GCNGC 6 cut(s) 118, 228, 574, 1038, 1284, 1495
PleI GAGTC 2 cut(s) 550, 791
PpsI GAGTC 2 cut(s) 550, 791
PpuMI RGGWCCY 1 cut(s) 1442
PscI ACATGT 1 cut(s) 1426
PshAI GACNNNNGTC 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 1066
Psp5II RGGWCCY 1 cut(s) 1442
Psp6I CCWGG 2 cut(s) 366, 421
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 2 cut(s) 366, 421
PspN4I GGNNCC 4 cut(s) 189, 395, 1015, 1443
PspPI GGNCC 4 cut(s) 187, 240, 247, 1442
PspPPI RGGWCCY 1 cut(s) 1442
PsuI RGATCY 3 cut(s) 826, 1013, 1101
RsaI GTAC 2 cut(s) 395, 1463
RsaNI GTAC 2 cut(s) 394, 1462
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 1066
SacII CCGCGG 1 cut(s) 1286
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 554, 744, 752, 852
SatI GCNGC 6 cut(s) 117, 227, 573, 1037, 1283, 1494
Sau96I GGNCC 4 cut(s) 187, 240, 247, 1442
SchI GAGTC 2 cut(s) 551, 791
ScrFI CCNGG 2 cut(s) 368, 423
SduI GDGCHC 2 cut(s) 132, 1066
SfaNI GCATC 2 cut(s) 1296, 1480
Sfr303I CCGCGG 1 cut(s) 1286
SgrBI CCGCGG 1 cut(s) 1286
SinI GGWCC 4 cut(s) 187, 240, 247, 1442
SmiI ATTTAAAT 1 cut(s) 853
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 3 cut(s) 164, 989, 1301
SmoI CTYRAG 3 cut(s) 164, 989, 1301
SseBI AGGCCT 1 cut(s) 94
SsiI CCGC 3 cut(s) 725, 1283, 1285
SspMI CTAG 1 cut(s) 1570
SstI GAGCTC 1 cut(s) 1066
StuI AGGCCT 1 cut(s) 94
StyD4I CCNGG 2 cut(s) 366, 421
StyI CCWWGG 3 cut(s) 15, 89, 243
SwaI ATTTAAAT 1 cut(s) 853
TaaI ACNGT 5 cut(s) 52, 139, 220, 440, 1111
TaqI TCGA 3 cut(s) 141, 1197, 1236
TatI WGTACW 1 cut(s) 1461
TauI GCSGC 1 cut(s) 1285
TfiI GAWTC 6 cut(s) 376, 711, 895, 1125, 1153, 1199
Tru1I TTAA 4 cut(s) 554, 744, 752, 852
Tru9I TTAA 4 cut(s) 554, 744, 752, 852
TscAI CASTG 8 cut(s) 57, 87, 151, 223, 595, 691, 1233, 1333
TseFI GTSAC 3 cut(s) 78, 359, 682
TseI GCWGC 5 cut(s) 116, 226, 572, 1036, 1493
Tsp45I GTSAC 3 cut(s) 78, 359, 682
TspDTI ATGAA 9 cut(s) 31, 80, 279, 467, 492, 578, 858, 908, 1413
TspGWI ACGGA 2 cut(s) 839, 1379
TspRI CASTG 8 cut(s) 57, 87, 151, 223, 595, 691, 1233, 1333
VpaK11BI GGWCC 4 cut(s) 187, 240, 247, 1442
XapI RAATTY 1 cut(s) 1045
XceI RCATGY 1 cut(s) 1430
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 609, 1385
XspI CTAG 1 cut(s) 1570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.