Rh7AG244400

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0016857
Physical Location & Seq
Reverse (-)
24045490 .. 24048147
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG244400.1

Sequence Viewer

Length: 1674 bp
ATGGGTGTAAAACCCAAGGAAAACCCACCATCCCCAGCCTTCATAGAAACAGTGGAAGAGATCATGAAAATCTACAAGTCACTGCCACCAAGGCCTTCCATTGAAGAGGTTGAAGCAGCCATGTCTGTGCTCAAAACAGTCGACACTGAAGAAGAACAGAGACTTGAGGAGATATCAAAGCAGGTGGTCCCCAAAGATGTCCCTGAAGAACTCTTCTCTGTTTTGCAGCAGGTGAGGAGGACCATGGTCCTGTTTCAGAGCCATGAACAGAGGAGAGAGGCTTCTGAGGTGGTTGAGTTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGCGCTGGTTTCTGGTGACACCCAGAAGGAGAATCATGTTGCTTTTGGGTACCCAGTTGGGGAAATTGTGAGTGAGCCTGGGATTAGTGATGACAGTCTTGTGGTGATGAAGAAGAAGAAGAAGAAGAAGAAGGAAGATGAAGAGTTGAAGATAGATGGTTTCAAGGGTTTGGTGAAGGGTTCTTCCACTATTTCTTCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTTGCAGCTATAATAGAAAACACTGCTAAAAGTGGAGAATTAGTTCTTGATTTTAGAGGCAAATTAGTAGATCAAGTGGAGTGGCTTCCAGTATCACTTGGGAAATTATCAGATGTCACTGAATTGGACTTGTCCGAAAACCGAATCATGGCCATTCCGCCCACCATTGGTGGCCTTAAAGCCTTAACAAAGCTTGACCTCCACTCAAACCAACTCATAAACCTTCCAGACTCATTTGGTGAGTTGAGTACTCTCACGGATCTTGATCTCCATGCAAACAGATTTAAATCGCTTCCTGCTTCATTCGGAAACTTGATCAACCTCATGAATCTTGATTTGAGTTCAAATAGTTTCACCCGTTTGCCTGATGTAATTGGGAAGCTGATCAGCTTGAAGACATTGACTGCTGAAACAAATGATCTTGAGGAACTGCCTTTCACAATCGGATCCTGCACATCACTCGCTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTGCCCGAGGCAATTGGAAAGCTCGTAAACTTGGAGATCCTCACAGTTCACTACAACAGAATCAAAGGGTTGCCAACAACAATTGGGAATCTTAGCAGTTTGAAGGAGCTTGATGTTAGCTTCAACGAACTCGAATCCATACCCGAGAACTTGTGTTTTGCAGTGCGCCTCGAAAAACTGAATGTGTCAAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAAATTAGGCACTTACCACTCTCTTTCAGGTTCTTGTCAAAACTGAAGGTTTTCCGTGCCGATGAAACACCTTTGGAAGTTCCCCCAAGACATGTTATCCAGTTGGGTCCTCAGGTAATGCATGCCAACACTGCTTCCACTTTGGCTTTTCATTTATGTATGTTGCTTTCGATAATTTCTAGGGTACTGATTCAGCTTCTTTCTTCACAGGCAGTTGTAAAGTACATGGAAGATTATGTTGCCAAGATGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGAAGGGTTTTTGGTTTTGGTTTTGCTCAAAACTCTGCTCCACCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

557

Amino Acids

62.28

Weight (kDa)

5.53

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 217 - 281 3.3e-06 Leucine-rich repeat region
LRR_8 PF13855 230 - 286 3.3e-09 Leucine rich repeat
LRR_4 PF12799 231 - 267 7.4e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 256 - 354 6.9e-12 Leucine-rich repeat region
LRR_8 PF13855 275 - 332 5.2e-07 Leucine rich repeat
LRR_14 PF23598 330 - 419 4.9e-09 Leucine-rich repeat region
LRR_8 PF13855 344 - 401 9.1e-08 Leucine rich repeat
LRR_8 PF13855 367 - 422 8.9e-07 Leucine rich repeat
LRR_14 PF23598 425 - 469 2.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 172, 220
Acc36I ACCTGC 2 cut(s) 172, 220
Acc65I GGTACC 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 1291
AciI CCGC 3 cut(s) 731, 1289, 1291
AclWI GGATC 4 cut(s) 840, 1014, 1027, 1102
AcoI YGGCCR 1 cut(s) 723
AcsI RAATTY 1 cut(s) 1051
AcuI CTGAAG 4 cut(s) 168, 225, 525, 1406
AfaI GTAC 4 cut(s) 395, 823, 1527, 1565
AfiI CCNNNNNNNGG 3 cut(s) 403, 721, 740
AflIII ACRYGT 1 cut(s) 1432
AjnI CCWGG 1 cut(s) 421
AloI GAACNNNNNNTCC 2 cut(s) 600, 632
Alw21I GWGCWC 2 cut(s) 132, 1072
Alw26I GTCTC 1 cut(s) 154
AlwI GGATC 4 cut(s) 840, 1014, 1027, 1102
Ama87I CYCGRG 2 cut(s) 1076, 1214
AoxI GGCC 4 cut(s) 92, 325, 723, 745
ApeKI GCWGC 5 cut(s) 116, 226, 578, 1042, 1595
ApoI RAATTY 1 cut(s) 1051
Asp700I GAANNNNTTC 2 cut(s) 615, 1391
Asp718I GGTACC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 349, 1239
AspS9I GGNCC 4 cut(s) 187, 240, 247, 1448
AsuHPI GGTGA 6 cut(s) 244, 371, 460, 529, 824, 919
AvaI CYCGRG 2 cut(s) 1076, 1214
AvaII GGWCC 4 cut(s) 187, 240, 247, 1448
AxyI CCTNAGG 1 cut(s) 1452
BalI TGGCCA 1 cut(s) 725
BamHI GGATCC 1 cut(s) 1019
BanI GGYRCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 1072
BbsI GAAGAC 1 cut(s) 974
Bbv12I GWGCWC 2 cut(s) 132, 1072
BbvI GCAGC 5 cut(s) 128, 238, 590, 1029, 1582
BccI CCATC 4 cut(s) 37, 317, 494, 1582
BcgI CGANNNNNNTGC 2 cut(s) 1015, 1049
BciT130I CCWGG 1 cut(s) 423
BclI TGATCA 3 cut(s) 888, 957, 1339
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 2 cut(s) 1521, 1672
BfuAI ACCTGC 2 cut(s) 172, 220
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 6 cut(s) 117, 227, 579, 1043, 1289, 1596
BlpI GCTNAGC 1 cut(s) 1038
BlsI GCNGC 6 cut(s) 118, 228, 580, 1044, 1290, 1597
BmcAI AGTACT 1 cut(s) 823
Bme1390I CCNGG 1 cut(s) 423
Bme18I GGWCC 4 cut(s) 187, 240, 247, 1448
BmeT110I CYCGRG 2 cut(s) 1076, 1214
BmgT120I GGNCC 4 cut(s) 187, 240, 247, 1448
BmiI GGNNCC 4 cut(s) 189, 395, 1021, 1449
BmrFI CCNGG 1 cut(s) 423
BmrI ACTGGG 1 cut(s) 392
BmsI GCATC 2 cut(s) 1302, 1582
BmuI ACTGGG 1 cut(s) 392
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 974
Bpu1102I GCTNAGC 1 cut(s) 1038
BpuEI CTTGAG 3 cut(s) 185, 1016, 1328
BsaBI GATNNNNATC 2 cut(s) 837, 859
BsaJI CCNNGG 6 cut(s) 15, 89, 243, 422, 1077, 1289
BsaXI ACNNNNNCTCC 2 cut(s) 600, 630
Bsc4I CCNNNNNNNGG 3 cut(s) 403, 721, 740
Bse1I ACTGG 3 cut(s) 398, 662, 1441
Bse21I CCTNAGG 1 cut(s) 1452
Bse8I GATNNNNATC 2 cut(s) 837, 859
BseBI CCWGG 1 cut(s) 423
BseDI CCNNGG 6 cut(s) 15, 89, 243, 422, 1077, 1289
BseGI GGATG 2 cut(s) 29, 1597
BseJI GATNNNNATC 2 cut(s) 837, 859
BseLI CCNNNNNNNGG 3 cut(s) 403, 721, 740
BseMII CTCAG 4 cut(s) 276, 543, 1029, 1466
BseNI ACTGG 3 cut(s) 398, 662, 1441
BseRI GAGGAG 3 cut(s) 182, 250, 286
BseXI GCAGC 5 cut(s) 128, 238, 590, 1029, 1582
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 1009
Bsh1236I CGCG 1 cut(s) 1291
BshFI GGCC 4 cut(s) 94, 327, 725, 747
BshNI GGYRCC 1 cut(s) 393
BsiHKAI GWGCWC 2 cut(s) 132, 1072
BsiHKCI CYCGRG 2 cut(s) 1076, 1214
BslFI GGGAC 2 cut(s) 173, 185
BslI CCNNNNNNNGG 3 cut(s) 403, 721, 740
BsmAI GTCTC 1 cut(s) 154
BsmFI GGGAC 2 cut(s) 173, 185
BsnI GGCC 4 cut(s) 94, 327, 725, 747
BsoBI CYCGRG 2 cut(s) 1076, 1214
Bsp1286I GDGCHC 2 cut(s) 132, 1072
Bsp1720I GCTNAGC 1 cut(s) 1038
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 3 cut(s) 731, 1289, 1291
BspANI GGCC 4 cut(s) 94, 327, 725, 747
BspCNI CTCAG 4 cut(s) 277, 544, 1030, 1465
BspFNI CGCG 1 cut(s) 1291
BspHI TCATGA 2 cut(s) 63, 897
BspLI GGNNCC 4 cut(s) 189, 395, 1021, 1449
BspMI ACCTGC 2 cut(s) 172, 220
BspPI GGATC 4 cut(s) 840, 1014, 1027, 1102
BspT107I GGYRCC 1 cut(s) 393
BsrI ACTGG 3 cut(s) 398, 662, 1441
BssECI CCNNGG 6 cut(s) 15, 89, 243, 422, 1077, 1289
BssT1I CCWWGG 3 cut(s) 15, 89, 243
Bst2UI CCWGG 1 cut(s) 423
Bst4CI ACNGT 4 cut(s) 52, 139, 440, 1117
Bst6I CTCTTC 5 cut(s) 51, 99, 218, 480, 1314
BstC8I GCNNGC 1 cut(s) 1464
BstDEI CTNAG 6 cut(s) 285, 552, 1038, 1064, 1163, 1452
BstDSI CCRYGG 2 cut(s) 243, 1289
BstF5I GGATG 2 cut(s) 29, 1597
BstFNI CGCG 1 cut(s) 1291
BstHHI GCGC 2 cut(s) 349, 1239
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 2 cut(s) 91, 1472
BstNI CCWGG 1 cut(s) 423
BstNSI RCATGY 2 cut(s) 1436, 1466
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 1 cut(s) 421
BstUI CGCG 1 cut(s) 1291
BstV1I GCAGC 5 cut(s) 128, 238, 590, 1029, 1582
BstV2I GAAGAC 1 cut(s) 974
BstX2I RGATCY 3 cut(s) 832, 1019, 1107
BstYI RGATCY 3 cut(s) 832, 1019, 1107
Bsu36I CCTNAGG 1 cut(s) 1452
BsuRI GGCC 4 cut(s) 94, 327, 725, 747
BtgI CCRYGG 2 cut(s) 243, 1289
BtsCI GGATG 2 cut(s) 29, 1597
BtsI GCAGTG 4 cut(s) 80, 594, 1239, 1470
BtsIMutI CAGTG 8 cut(s) 57, 80, 144, 594, 690, 1239, 1339, 1470
BveI ACCTGC 2 cut(s) 172, 220
Cac8I GCNNGC 1 cut(s) 1464
CciI TCATGA 2 cut(s) 63, 897
CfoI GCGC 2 cut(s) 349, 1239
Cfr13I GGNCC 4 cut(s) 187, 240, 247, 1448
Cfr42I CCGCGG 1 cut(s) 1292
Csp6I GTAC 4 cut(s) 394, 822, 1526, 1564
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 635, 670
CviQI GTAC 4 cut(s) 394, 822, 1526, 1564
DdeI CTNAG 6 cut(s) 285, 552, 1038, 1064, 1163, 1452
DraI TTTAAA 1 cut(s) 859
EaeI YGGCCR 1 cut(s) 723
Eam1104I CTCTTC 5 cut(s) 51, 99, 218, 480, 1314
EarI CTCTTC 5 cut(s) 51, 99, 218, 480, 1314
EciI GGCGGA 1 cut(s) 720
Ecl136II GAGCTC 1 cut(s) 1070
Eco130I CCWWGG 3 cut(s) 15, 89, 243
Eco147I AGGCCT 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 1072
Eco32I GATATC 2 cut(s) 174, 1330
Eco47I GGWCC 4 cut(s) 187, 240, 247, 1448
Eco53kI GAGCTC 1 cut(s) 1070
Eco57I CTGAAG 4 cut(s) 168, 225, 525, 1406
Eco81I CCTNAGG 1 cut(s) 1452
Eco88I CYCGRG 2 cut(s) 1076, 1214
EcoICRI GAGCTC 1 cut(s) 1070
EcoO109I RGGNCCY 1 cut(s) 1448
EcoRII CCWGG 1 cut(s) 421
EcoRV GATATC 2 cut(s) 174, 1330
EcoT14I CCWWGG 3 cut(s) 15, 89, 243
EcoT22I ATGCAT 1 cut(s) 1464
EcoT38I GRGCYC 1 cut(s) 1072
ErhI CCWWGG 3 cut(s) 15, 89, 243
FaqI GGGAC 2 cut(s) 173, 185
FbaI TGATCA 3 cut(s) 888, 957, 1339
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 117, 227, 579, 1043, 1289, 1596
FokI GGATG 2 cut(s) 16, 1604
FriOI GRGCYC 1 cut(s) 1072
Fsp4HI GCNGC 6 cut(s) 117, 227, 579, 1043, 1289, 1596
FspBI CTAG 2 cut(s) 1521, 1672
GlaI GCGC 2 cut(s) 348, 1238
GluI GCNGC 6 cut(s) 117, 227, 579, 1043, 1289, 1596
GsaI CCCAGC 1 cut(s) 38
HaeIII GGCC 4 cut(s) 94, 327, 725, 747
HhaI GCGC 2 cut(s) 349, 1239
Hin6I GCGC 2 cut(s) 347, 1237
HinP1I GCGC 2 cut(s) 347, 1237
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 764
HinfI GANTC 9 cut(s) 376, 548, 717, 803, 901, 1131, 1159, 1205, 1531
HphI GGTGA 6 cut(s) 244, 371, 460, 529, 824, 919
Hpy166II GTNNAC 3 cut(s) 142, 1099, 1120
Hpy188I TCNGA 9 cut(s) 258, 286, 315, 336, 553, 685, 709, 881, 1019
Hpy188III TCNNGA 9 cut(s) 64, 543, 620, 800, 836, 898, 905, 995, 1307
Hpy8I GTNNAC 3 cut(s) 142, 1099, 1120
HpyCH4III ACNGT 4 cut(s) 52, 139, 440, 1117
HpyCH4V TGCA 8 cut(s) 226, 578, 848, 1026, 1045, 1232, 1462, 1598
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 1472
HpyF3I CTNAG 6 cut(s) 285, 552, 1038, 1064, 1163, 1452
HspAI GCGC 2 cut(s) 347, 1237
KpnI GGTACC 1 cut(s) 397
Ksp22I TGATCA 3 cut(s) 888, 957, 1339
KspI CCGCGG 1 cut(s) 1292
LmnI GCTCC 2 cut(s) 1177, 1664
Lsp1109I GCAGC 5 cut(s) 128, 238, 590, 1029, 1582
LweI GCATC 2 cut(s) 1302, 1582
MaeI CTAG 2 cut(s) 1521, 1672
MaeIII GTNAC 3 cut(s) 78, 359, 688
MfeI CAATTG 3 cut(s) 1083, 1152, 1296
MflI RGATCY 3 cut(s) 832, 1019, 1107
MhlI GDGCHC 2 cut(s) 132, 1072
MlsI TGGCCA 1 cut(s) 725
MluNI TGGCCA 1 cut(s) 725
MlyI GAGTC 2 cut(s) 557, 797
MmeI TCCRAC 1 cut(s) 1305
Mox20I TGGCCA 1 cut(s) 725
Mph1103I ATGCAT 1 cut(s) 1464
MroXI GAANNNNTTC 2 cut(s) 615, 1391
MscI TGGCCA 1 cut(s) 725
MseI TTAA 4 cut(s) 560, 750, 758, 858
MslI CAYNNNNRTG 1 cut(s) 125
Msp20I TGGCCA 1 cut(s) 725
MspA1I CMGCKG 1 cut(s) 1291
MspR9I CCNGG 1 cut(s) 423
MunI CAATTG 3 cut(s) 1083, 1152, 1296
MvaI CCWGG 1 cut(s) 423
MvnI CGCG 1 cut(s) 1291
MwoI GCNNNNNNNGC 2 cut(s) 91, 1472
NcoI CCATGG 1 cut(s) 243
NlaIV GGNNCC 4 cut(s) 189, 395, 1021, 1449
NmuCI GTSAC 3 cut(s) 78, 359, 688
NsiI ATGCAT 1 cut(s) 1464
NspI RCATGY 2 cut(s) 1436, 1466
PaeI GCATGC 1 cut(s) 1466
PagI TCATGA 2 cut(s) 63, 897
PaqCI CACCTGC 2 cut(s) 172, 220
PceI AGGCCT 1 cut(s) 94
PciI ACATGT 1 cut(s) 1432
PdmI GAANNNNTTC 2 cut(s) 615, 1391
PfeI GAWTC 7 cut(s) 376, 717, 901, 1131, 1159, 1205, 1531
PkrI GCNGC 6 cut(s) 118, 228, 580, 1044, 1290, 1597
PleI GAGTC 2 cut(s) 556, 797
PpsI GAGTC 2 cut(s) 556, 797
PpuMI RGGWCCY 1 cut(s) 1448
PscI ACATGT 1 cut(s) 1432
PshAI GACNNNNGTC 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 1072
Psp5II RGGWCCY 1 cut(s) 1448
Psp6I CCWGG 1 cut(s) 421
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 421
PspN4I GGNNCC 4 cut(s) 189, 395, 1021, 1449
PspPI GGNCC 4 cut(s) 187, 240, 247, 1448
PspPPI RGGWCCY 1 cut(s) 1448
PsuI RGATCY 3 cut(s) 832, 1019, 1107
RsaI GTAC 4 cut(s) 395, 823, 1527, 1565
RsaNI GTAC 4 cut(s) 394, 822, 1526, 1564
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 1072
SacII CCGCGG 1 cut(s) 1292
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 560, 750, 758, 858
SatI GCNGC 6 cut(s) 117, 227, 579, 1043, 1289, 1596
Sau96I GGNCC 4 cut(s) 187, 240, 247, 1448
ScaI AGTACT 1 cut(s) 823
SchI GAGTC 2 cut(s) 557, 797
ScrFI CCNGG 1 cut(s) 423
SduI GDGCHC 2 cut(s) 132, 1072
SfaNI GCATC 2 cut(s) 1302, 1582
Sfr303I CCGCGG 1 cut(s) 1292
SgrBI CCGCGG 1 cut(s) 1292
SinI GGWCC 4 cut(s) 187, 240, 247, 1448
SmiI ATTTAAAT 1 cut(s) 859
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 3 cut(s) 164, 995, 1307
SmoI CTYRAG 3 cut(s) 164, 995, 1307
SphI GCATGC 1 cut(s) 1466
SseBI AGGCCT 1 cut(s) 94
SsiI CCGC 3 cut(s) 731, 1289, 1291
SspMI CTAG 2 cut(s) 1521, 1672
SstI GAGCTC 1 cut(s) 1072
StuI AGGCCT 1 cut(s) 94
StyD4I CCNGG 1 cut(s) 421
StyI CCWWGG 3 cut(s) 15, 89, 243
SwaI ATTTAAAT 1 cut(s) 859
TaaI ACNGT 4 cut(s) 52, 139, 440, 1117
TaqI TCGA 4 cut(s) 141, 1203, 1242, 1511
TatI WGTACW 2 cut(s) 821, 1563
TauI GCSGC 1 cut(s) 1291
TfiI GAWTC 7 cut(s) 376, 717, 901, 1131, 1159, 1205, 1531
Tru1I TTAA 4 cut(s) 560, 750, 758, 858
Tru9I TTAA 4 cut(s) 560, 750, 758, 858
TscAI CASTG 8 cut(s) 57, 87, 151, 601, 697, 1239, 1339, 1477
TseFI GTSAC 3 cut(s) 78, 359, 688
TseI GCWGC 5 cut(s) 116, 226, 578, 1042, 1595
Tsp45I GTSAC 3 cut(s) 78, 359, 688
TspGWI ACGGA 2 cut(s) 845, 1385
TspRI CASTG 8 cut(s) 57, 87, 151, 601, 697, 1239, 1339, 1477
VpaK11BI GGWCC 4 cut(s) 187, 240, 247, 1448
XapI RAATTY 1 cut(s) 1051
XceI RCATGY 2 cut(s) 1436, 1466
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 615, 1391
XspI CTAG 2 cut(s) 1521, 1672
ZrmI AGTACT 1 cut(s) 823
Zsp2I ATGCAT 1 cut(s) 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.