Rroxscaffold_3G00249620

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0016857
Physical Location & Seq
Forward (+)
43395291 .. 43397477
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00249620.1

Sequence Viewer

Length: 1674 bp
ATGGTTGTAAAACCCAAGGAAAACGCATCATCCCCAGCCTTGATAGAAACAGTGGAAGAGATCATGAAAATCTACAAGTCACTGCCACCAAGGCCTTCCATTGAAGAGGTTGAAGCAGCCACGTCTGTGCTCAAAACAGTCGACACTGAAGAAGAACAGAGACTTGAGGAGATATCAAAGCAGGTGGTACCCAAAGATGTCCCTGAAGAACTCTTCTCTGTTTTGCAGCAGGTGAGGAGGACCATGGTCCTGTTTCAGAGCCATGAACAGAGGAGAGAGGCTTCTGAGGTGGTTGAGTTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGCGGTGGTTTCTGGTGACACCCAGAAGGAGAATCATGTTGCTTTTGGGTACCCAGTTGGGGAAATTGTGAGTGAGCCTGAAATTAGTGATGACAGTCTTGTGGTGATGAAGAAGAAGAAGACGAAGAAGAACAACGAAGATGAAGAGTTGAAGATAGATGGTTTCAAGGGTTTGGTGAAGAGTTCTTCCACTATATCTTCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTTGCAGCGATAATAGAAAACACTGCTAAAAGTGGAGAAGTAGTTCTTGATCTTAGAGGCAAATTAGCAGATCAAGTGGAGTGGCTTCCAGTATCACTTGGGAAATTATCAGATGTCACTGAATTGTACTTGTCCGAAAACCGAATCATGGCTATTCCGCCCACCATTGGTGGCCTTAAAGCCTTAACAAAGCTTGACCTCCACTCAAACCAACTTATAAACCTTCCAGACTCATTTGGTGAGTTGAGTAATCTCACGGATCTTGATCTCCATGCAAACAGATTGAAATCGCTTCCTGCTTCATTCGGAAACTTGATCAACCTCACGAATCTTGATTTGAGTTCAAATAGCTTCACCCGTTTGCCTGATGTAACTGGGAAACTGATCAGCTTGAAGACATTAAATGCTGAAACAAATGATCTTGAGGAACTGCCTTTCACAATCGGATCTTGCACATCACTCACTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTGCCCGAGGCAATTGGAAAGCTCCAAAACTTGGAGATCCTCACAGCTCACTACAACAGAATCAAAGGGTTGCCAACAACAGTGGGGAATCTTAGCAGTTTGAAGGAGCTTGATGTTAGCTTCAACGAACTCGAATCCATACCCGAGAACTTGTGTTTTGCAGTGCGCCTCGAAAAACTGAATGTGTCCAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAAATTAGGCACTTACCACTCTCTTTCAGGTTCTTGTCAAAACTGAAGGTTTTCCGTGCCGATGAAACACCTTTGGAAGTTCCCCCAAGACATGTTATACAGTTGGGTCCTCAGGTAATGCATGCCAACTCTGCTTCCACTTTGGCTTTTCATTTATGTATGTTGCTTTCGATAATTTCTAGAGTACTGATTCAGCTTCTTTCTTCACAGGCAGTTGTAAAGTACATGGAAGATTATGTTGCCAAGATGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGGGTTTTTGGTTCTGGTTTTGCTCAAAACTCTGCTCCACCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

557

Amino Acids

62.17

Weight (kDa)

5.35

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 207 - 305 4.6e-09 Leucine-rich repeat region
LRR_8 PF13855 231 - 287 6.2e-10 Leucine rich repeat
LRR_4 PF12799 232 - 268 6.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 275 - 333 8.9e-07 Leucine rich repeat
LRR_14 PF23598 294 - 409 1.8e-14 Leucine-rich repeat region
LRR_8 PF13855 345 - 402 4.6e-07 Leucine rich repeat
LRR_14 PF23598 426 - 470 2.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AarI CACCTGC 2 cut(s) 172, 220
Acc36I ACCTGC 2 cut(s) 172, 220
Acc65I GGTACC 2 cut(s) 187, 393
AccB1I GGYRCC 2 cut(s) 187, 393
AccB7I CCANNNNNTGG 1 cut(s) 1105
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 1294
AciI CCGC 4 cut(s) 347, 734, 1292, 1294
AclWI GGATC 3 cut(s) 843, 1030, 1105
AcsI RAATTY 1 cut(s) 1054
AcuI CTGAAG 4 cut(s) 168, 225, 528, 1409
AfaI GTAC 5 cut(s) 189, 395, 704, 1530, 1568
AfiI CCNNNNNNNGG 4 cut(s) 403, 724, 743, 1105
AflIII ACRYGT 1 cut(s) 1435
AjiI CACGTC 1 cut(s) 123
AleI CACNNNNGTG 1 cut(s) 125
AloI GAACNNNNNNTCC 2 cut(s) 603, 635
Alw21I GWGCWC 2 cut(s) 132, 1075
Alw26I GTCTC 1 cut(s) 154
AlwI GGATC 3 cut(s) 843, 1030, 1105
Ama87I CYCGRG 2 cut(s) 1079, 1217
AoxI GGCC 3 cut(s) 92, 325, 748
ApeKI GCWGC 5 cut(s) 116, 226, 581, 1045, 1598
ApoI RAATTY 1 cut(s) 1054
Asp700I GAANNNNTTC 2 cut(s) 618, 1394
Asp718I GGTACC 2 cut(s) 187, 393
AspLEI GCGC 1 cut(s) 1242
AspS9I GGNCC 3 cut(s) 240, 247, 1451
AsuHPI GGTGA 6 cut(s) 244, 371, 460, 532, 827, 922
AvaI CYCGRG 2 cut(s) 1079, 1217
AvaII GGWCC 3 cut(s) 240, 247, 1451
AxyI CCTNAGG 1 cut(s) 1455
BanI GGYRCC 2 cut(s) 187, 393
BanII GRGCYC 1 cut(s) 1075
BbsI GAAGAC 2 cut(s) 470, 977
Bbv12I GWGCWC 2 cut(s) 132, 1075
BbvI GCAGC 5 cut(s) 128, 238, 593, 1032, 1585
BccI CCATC 3 cut(s) 317, 497, 1585
BclI TGATCA 3 cut(s) 891, 960, 1342
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 2 cut(s) 1524, 1672
BfuAI ACCTGC 2 cut(s) 172, 220
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 6 cut(s) 117, 227, 582, 1046, 1292, 1599
BlsI GCNGC 6 cut(s) 118, 228, 583, 1047, 1293, 1600
BmcAI AGTACT 1 cut(s) 1530
Bme18I GGWCC 3 cut(s) 240, 247, 1451
BmeT110I CYCGRG 2 cut(s) 1079, 1217
BmgBI CACGTC 1 cut(s) 123
BmgT120I GGNCC 3 cut(s) 240, 247, 1451
BmiI GGNNCC 3 cut(s) 189, 395, 1452
BmrI ACTGGG 2 cut(s) 392, 960
BmsI GCATC 3 cut(s) 35, 1305, 1585
BmuI ACTGGG 2 cut(s) 392, 960
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 2 cut(s) 470, 977
BpuEI CTTGAG 3 cut(s) 185, 1019, 1331
BsaBI GATNNNNATC 2 cut(s) 840, 862
BsaJI CCNNGG 5 cut(s) 15, 89, 243, 1080, 1292
BsaXI ACNNNNNCTCC 2 cut(s) 603, 633
Bsc4I CCNNNNNNNGG 4 cut(s) 403, 724, 743, 1105
Bse1I ACTGG 3 cut(s) 398, 665, 955
Bse21I CCTNAGG 1 cut(s) 1455
Bse8I GATNNNNATC 2 cut(s) 840, 862
BseDI CCNNGG 5 cut(s) 15, 89, 243, 1080, 1292
BseGI GGATG 2 cut(s) 29, 1600
BseJI GATNNNNATC 2 cut(s) 840, 862
BseLI CCNNNNNNNGG 4 cut(s) 403, 724, 743, 1105
BseMII CTCAG 4 cut(s) 276, 546, 1032, 1469
BseNI ACTGG 3 cut(s) 398, 665, 955
BseRI GAGGAG 3 cut(s) 182, 250, 286
BseXI GCAGC 5 cut(s) 128, 238, 593, 1032, 1585
BseYI CCCAGC 1 cut(s) 34
Bsh1236I CGCG 1 cut(s) 1294
BshFI GGCC 3 cut(s) 94, 327, 750
BshNI GGYRCC 2 cut(s) 187, 393
BsiHKAI GWGCWC 2 cut(s) 132, 1075
BsiHKCI CYCGRG 2 cut(s) 1079, 1217
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 4 cut(s) 403, 724, 743, 1105
BsmAI GTCTC 1 cut(s) 154
BsmFI GGGAC 1 cut(s) 185
BsnI GGCC 3 cut(s) 94, 327, 750
BsoBI CYCGRG 2 cut(s) 1079, 1217
Bsp1286I GDGCHC 2 cut(s) 132, 1075
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 4 cut(s) 347, 734, 1292, 1294
BspANI GGCC 3 cut(s) 94, 327, 750
BspCNI CTCAG 4 cut(s) 277, 547, 1033, 1468
BspFNI CGCG 1 cut(s) 1294
BspHI TCATGA 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 189, 395, 1452
BspMI ACCTGC 2 cut(s) 172, 220
BspPI GGATC 3 cut(s) 843, 1030, 1105
BspT107I GGYRCC 2 cut(s) 187, 393
BsrI ACTGG 3 cut(s) 398, 665, 955
BssECI CCNNGG 5 cut(s) 15, 89, 243, 1080, 1292
BssT1I CCWWGG 3 cut(s) 15, 89, 243
Bst4CI ACNGT 5 cut(s) 52, 139, 440, 1156, 1446
Bst6I CTCTTC 6 cut(s) 51, 99, 218, 483, 518, 1317
BstC8I GCNNGC 1 cut(s) 1467
BstDEI CTNAG 7 cut(s) 285, 555, 629, 1041, 1067, 1166, 1455
BstDSI CCRYGG 2 cut(s) 243, 1292
BstF5I GGATG 2 cut(s) 29, 1600
BstFNI CGCG 1 cut(s) 1294
BstHHI GCGC 1 cut(s) 1242
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 2 cut(s) 91, 1475
BstNSI RCATGY 2 cut(s) 1439, 1469
BstPAI GACNNNNGTC 1 cut(s) 245
BstUI CGCG 1 cut(s) 1294
BstV1I GCAGC 5 cut(s) 128, 238, 593, 1032, 1585
BstV2I GAAGAC 2 cut(s) 470, 977
BstX2I RGATCY 3 cut(s) 835, 1022, 1110
BstYI RGATCY 3 cut(s) 835, 1022, 1110
Bsu36I CCTNAGG 1 cut(s) 1455
BsuRI GGCC 3 cut(s) 94, 327, 750
BtgI CCRYGG 2 cut(s) 243, 1292
BtrI CACGTC 1 cut(s) 123
BtsCI GGATG 2 cut(s) 29, 1600
BtsI GCAGTG 3 cut(s) 80, 597, 1242
BtsIMutI CAGTG 9 cut(s) 57, 80, 144, 597, 693, 1038, 1161, 1242, 1342
BveI ACCTGC 2 cut(s) 172, 220
Cac8I GCNNGC 1 cut(s) 1467
CciI TCATGA 1 cut(s) 63
CfoI GCGC 1 cut(s) 1242
Cfr13I GGNCC 3 cut(s) 240, 247, 1451
Cfr42I CCGCGG 1 cut(s) 1295
Csp6I GTAC 5 cut(s) 188, 394, 703, 1529, 1567
CspCI CAANNNNNGTGG 6 cut(s) 165, 200, 638, 673, 1137, 1172
CviAII CATG 9 cut(s) 64, 244, 263, 380, 724, 848, 1436, 1466, 1570
CviQI GTAC 5 cut(s) 188, 394, 703, 1529, 1567
DdeI CTNAG 7 cut(s) 285, 555, 629, 1041, 1067, 1166, 1455
Eam1104I CTCTTC 6 cut(s) 51, 99, 218, 483, 518, 1317
EarI CTCTTC 6 cut(s) 51, 99, 218, 483, 518, 1317
EciI GGCGGA 1 cut(s) 723
Ecl136II GAGCTC 1 cut(s) 1073
Eco130I CCWWGG 3 cut(s) 15, 89, 243
Eco147I AGGCCT 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 1075
Eco32I GATATC 2 cut(s) 174, 1333
Eco47I GGWCC 3 cut(s) 240, 247, 1451
Eco53kI GAGCTC 1 cut(s) 1073
Eco57I CTGAAG 4 cut(s) 168, 225, 528, 1409
Eco81I CCTNAGG 1 cut(s) 1455
Eco88I CYCGRG 2 cut(s) 1079, 1217
EcoICRI GAGCTC 1 cut(s) 1073
EcoO109I RGGNCCY 1 cut(s) 1451
EcoRV GATATC 2 cut(s) 174, 1333
EcoT14I CCWWGG 3 cut(s) 15, 89, 243
EcoT22I ATGCAT 1 cut(s) 1467
EcoT38I GRGCYC 1 cut(s) 1075
ErhI CCWWGG 3 cut(s) 15, 89, 243
FaeI CATG 9 cut(s) 67, 247, 266, 383, 727, 851, 1439, 1469, 1573
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 1 cut(s) 185
FatI CATG 9 cut(s) 63, 243, 262, 379, 723, 847, 1435, 1465, 1569
FbaI TGATCA 3 cut(s) 891, 960, 1342
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 117, 227, 582, 1046, 1292, 1599
FokI GGATG 2 cut(s) 16, 1607
FriOI GRGCYC 1 cut(s) 1075
Fsp4HI GCNGC 6 cut(s) 117, 227, 582, 1046, 1292, 1599
FspBI CTAG 2 cut(s) 1524, 1672
GlaI GCGC 1 cut(s) 1241
GluI GCNGC 6 cut(s) 117, 227, 582, 1046, 1292, 1599
GsaI CCCAGC 1 cut(s) 38
HaeIII GGCC 3 cut(s) 94, 327, 750
HhaI GCGC 1 cut(s) 1242
Hin1II CATG 9 cut(s) 67, 247, 266, 383, 727, 851, 1439, 1469, 1573
Hin6I GCGC 1 cut(s) 1240
HinP1I GCGC 1 cut(s) 1240
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 767
HinfI GANTC 9 cut(s) 376, 551, 720, 806, 904, 1134, 1162, 1208, 1534
HphI GGTGA 6 cut(s) 244, 371, 460, 532, 827, 922
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 9 cut(s) 258, 286, 315, 336, 556, 688, 712, 884, 1022
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 7 cut(s) 105, 364, 568, 809, 1171, 1384, 1618
HpyCH4III ACNGT 5 cut(s) 52, 139, 440, 1156, 1446
HpyCH4IV ACGT 1 cut(s) 122
HpyCH4V TGCA 8 cut(s) 226, 581, 851, 1029, 1048, 1235, 1465, 1601
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 1475
HpyF3I CTNAG 7 cut(s) 285, 555, 629, 1041, 1067, 1166, 1455
HpySE526I ACGT 1 cut(s) 122
Hsp92II CATG 9 cut(s) 67, 247, 266, 383, 727, 851, 1439, 1469, 1573
HspAI GCGC 1 cut(s) 1240
KpnI GGTACC 2 cut(s) 191, 397
Ksp22I TGATCA 3 cut(s) 891, 960, 1342
KspI CCGCGG 1 cut(s) 1295
LmnI GCTCC 3 cut(s) 1101, 1180, 1664
Lsp1109I GCAGC 5 cut(s) 128, 238, 593, 1032, 1585
LweI GCATC 3 cut(s) 35, 1305, 1585
MaeI CTAG 2 cut(s) 1524, 1672
MaeII ACGT 1 cut(s) 122
MaeIII GTNAC 4 cut(s) 78, 359, 691, 946
MfeI CAATTG 2 cut(s) 1086, 1299
MflI RGATCY 3 cut(s) 835, 1022, 1110
MhlI GDGCHC 2 cut(s) 132, 1075
MlyI GAGTC 2 cut(s) 560, 800
MmeI TCCRAC 2 cut(s) 1287, 1308
Mph1103I ATGCAT 1 cut(s) 1467
MroXI GAANNNNTTC 2 cut(s) 618, 1394
MseI TTAA 4 cut(s) 563, 753, 761, 977
MslI CAYNNNNRTG 1 cut(s) 125
MspA1I CMGCKG 1 cut(s) 1294
MunI CAATTG 2 cut(s) 1086, 1299
MvnI CGCG 1 cut(s) 1294
MwoI GCNNNNNNNGC 2 cut(s) 91, 1475
NcoI CCATGG 1 cut(s) 243
NlaIII CATG 9 cut(s) 67, 247, 266, 383, 727, 851, 1439, 1469, 1573
NlaIV GGNNCC 3 cut(s) 189, 395, 1452
NmuCI GTSAC 3 cut(s) 78, 359, 691
NsiI ATGCAT 1 cut(s) 1467
NspI RCATGY 2 cut(s) 1439, 1469
OliI CACNNNNGTG 1 cut(s) 125
PaeI GCATGC 1 cut(s) 1469
PagI TCATGA 1 cut(s) 63
PaqCI CACCTGC 2 cut(s) 172, 220
PceI AGGCCT 1 cut(s) 94
PciI ACATGT 1 cut(s) 1435
PdmI GAANNNNTTC 2 cut(s) 618, 1394
PfeI GAWTC 7 cut(s) 376, 720, 904, 1134, 1162, 1208, 1534
PflMI CCANNNNNTGG 1 cut(s) 1105
PkrI GCNGC 6 cut(s) 118, 228, 583, 1047, 1293, 1600
PleI GAGTC 2 cut(s) 559, 800
PpsI GAGTC 2 cut(s) 559, 800
PpuMI RGGWCCY 1 cut(s) 1451
PscI ACATGT 1 cut(s) 1435
PshAI GACNNNNGTC 1 cut(s) 245
PsiI TTATAA 1 cut(s) 794
Psp124BI GAGCTC 1 cut(s) 1075
Psp5II RGGWCCY 1 cut(s) 1451
PspFI CCCAGC 1 cut(s) 34
PspN4I GGNNCC 3 cut(s) 189, 395, 1452
PspPI GGNCC 3 cut(s) 240, 247, 1451
PspPPI RGGWCCY 1 cut(s) 1451
PsuI RGATCY 3 cut(s) 835, 1022, 1110
RsaI GTAC 5 cut(s) 189, 395, 704, 1530, 1568
RsaNI GTAC 5 cut(s) 188, 394, 703, 1529, 1567
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 1075
SacII CCGCGG 1 cut(s) 1295
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 563, 753, 761, 977
SatI GCNGC 6 cut(s) 117, 227, 582, 1046, 1292, 1599
Sau96I GGNCC 3 cut(s) 240, 247, 1451
ScaI AGTACT 1 cut(s) 1530
SchI GAGTC 2 cut(s) 560, 800
SduI GDGCHC 2 cut(s) 132, 1075
SfaNI GCATC 3 cut(s) 35, 1305, 1585
Sfr303I CCGCGG 1 cut(s) 1295
SgrBI CCGCGG 1 cut(s) 1295
SinI GGWCC 3 cut(s) 240, 247, 1451
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 3 cut(s) 164, 998, 1310
SmoI CTYRAG 3 cut(s) 164, 998, 1310
SphI GCATGC 1 cut(s) 1469
SseBI AGGCCT 1 cut(s) 94
SsiI CCGC 4 cut(s) 347, 734, 1292, 1294
SspMI CTAG 2 cut(s) 1524, 1672
SstI GAGCTC 1 cut(s) 1075
StuI AGGCCT 1 cut(s) 94
StyI CCWWGG 3 cut(s) 15, 89, 243
TaaI ACNGT 5 cut(s) 52, 139, 440, 1156, 1446
TaiI ACGT 1 cut(s) 125
TaqI TCGA 4 cut(s) 141, 1206, 1245, 1514
TatI WGTACW 3 cut(s) 702, 1528, 1566
TauI GCSGC 1 cut(s) 1294
TfiI GAWTC 7 cut(s) 376, 720, 904, 1134, 1162, 1208, 1534
Tru1I TTAA 4 cut(s) 563, 753, 761, 977
Tru9I TTAA 4 cut(s) 563, 753, 761, 977
TscAI CASTG 9 cut(s) 57, 87, 151, 604, 700, 1045, 1161, 1242, 1342
TseFI GTSAC 3 cut(s) 78, 359, 691
TseI GCWGC 5 cut(s) 116, 226, 581, 1045, 1598
Tsp45I GTSAC 3 cut(s) 78, 359, 691
TspDTI ATGAA 8 cut(s) 80, 279, 467, 501, 587, 867, 1422, 1484
TspGWI ACGGA 2 cut(s) 848, 1388
TspRI CASTG 9 cut(s) 57, 87, 151, 604, 700, 1045, 1161, 1242, 1342
Van91I CCANNNNNTGG 1 cut(s) 1105
VpaK11BI GGWCC 3 cut(s) 240, 247, 1451
XapI RAATTY 1 cut(s) 1054
XbaI TCTAGA 1 cut(s) 1523
XceI RCATGY 2 cut(s) 1439, 1469
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 618, 1394
XspI CTAG 2 cut(s) 1524, 1672
ZrmI AGTACT 1 cut(s) 1530
Zsp2I ATGCAT 1 cut(s) 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.