Rh7BG239700

Plant intracellular Ras-group-related LRR protein 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0016857
Physical Location & Seq
Reverse (-)
21197868 .. 21200463
2596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG239700.1

Sequence Viewer

Length: 1671 bp
ATGGGTGTAAAACTCAAGGAAAACCCACCATCCCCAGCCTTCATAGAAACAGTGGAAGAGATCATGAAAATCTACAAGTCACTGCCACCAAGGCCTTCCATTGAAGAGGTTGAAGCAGCCATGTCTGTGCTCAAAACAGTCGACACTGAAGAAGAACAGAGACTTGAGGAGATATCAAAGAAGGTGGTCCCCAAAGATGTCCCTGAAGAACTCTTCTCTGTTTTGCTGCAGGTGAGGAGGACCATGGTCCTGTTTCAGAGCCATGAACAGAGGAGAGAGGCTTCTGAGGTGGTTGAGTTTGACAAGATGTTTCAGACTTTTGATGGCCTTATTCAGAGGACTTCTGCGCTGGTTTCTGGTGACACCCAGAAGGAGAATCATGTTGCTTTTGGGTACCCAGTTGGGGAAATTGTGAGTGAGCCTGGGATTAGTGATGACAGTCTTGTGGTGATGATGAAGAAGAAGAAGAACAAGGAAGATGAAGAGTTGAAGATAGATGGTTTCAAGGGTTTGGTTAAGAGTTCTTCCACTATTTCTTCAGGAGAGTCTGAGAAATTAAGTCTAATGAAGGTTGCAGCTATAATAGAAAACACTGCTAAAAGTGGAGAAGTAGTTCTTGATCTTAGAGGCAAATTAGTAGATCAAGTGGAGTGGCTTCCAGTATCACTTGGGAAATTATCAGGTGTCACTGAGTTGGACTTGTCCGAAAACCGAATCATGGCTATTCCACCCACCATTGGTGGCCTTAAAGCATTAACAAAGGTTGACTTCCACTCAAACCAACTCATAAACCTTCCAGACTCATTTGGTGAGTTGAGTAATCTCACTGATCTTGATCTCCATGCAAACAGATTGAAATCGCTTCCTGCTTCATTCGGAAACTTGATCAACCTCATGAATCTTGATTTGAGTTCAAATAGCTTCACCCGTTTGCCTGATGTAATTGGGAAGCTGATCAGCTTGAAGACATTGAATGCTGAAACAAATGATCTTGAGGAACTGCCTTTCACAATCGGATCCTGCACATCACTCGCTGAGCTGCATTTGAATTTCAATCAGCTAAGAGCTCTGCCCGAGGCAATTGGAAAGCTCGAAAACTTGGAGATCCTCACAGTTCACTACAACAGAATCAAAGGGTTGCCAACAACAATGGGGAATCTTAGCAGTTTGAAGGAGCTTGATGTTAGCTTCAACGAACTCGAATCCATACCCGAGAACTTGTGTTTTGCAGTGCGCCTCGAAAAACTGAATGTGTCAAACAACTTTGCTGACTTGACAGCTTTGCCGCGGTCAATTGGAAATCTTGAGATGCTTGAAGAGTTGGATATCAGTGATGATCAAATTAGGCACTTACCACTCTCTTTCAGGTTCTTGTCAAAACTGAAGGTTTTCCGTGCCGATGAAACACCTTTGGAAGTTCCCCCAAGACATGTTATCCAGTTGGGTCCTCAGGTAATGCATGCCAACTCTGCTTCCACTTTGGCTTTTCATTTGTGTATGTTGCTTTCGATAATTTCTAGAGTACTGATTCAGCTTCTTTCTTCACAGGCAGTTGTAAAGTACATGGAAGATTATGTTGCCAAGATGGATGCTGCATTTCAACCATTGAAGAAGAAGAAGAAGGGGTTTTGGTTTTGGTTTTGCTCAAAACTCTGCTCCACCAAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000578 GO:0000902 GO:0001654 GO:0001655 GO:0001700 GO:0001708 GO:0001736 GO:0001737 GO:0001738 GO:0001745 GO:0001751 GO:0001752 GO:0001754 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002164 GO:0002165 GO:0002168 GO:0003002 GO:0003006 GO:0003008 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0005918 GO:0005923 GO:0005938 GO:0006355 GO:0006357 GO:0007028 GO:0007043 GO:0007154 GO:0007163 GO:0007164 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007308 GO:0007309 GO:0007314 GO:0007315 GO:0007318 GO:0007350 GO:0007351 GO:0007389 GO:0007391 GO:0007399 GO:0007423 GO:0007444 GO:0007464 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007635 GO:0008104 GO:0008150 GO:0008283 GO:0008285 GO:0008358 GO:0008544 GO:0008593 GO:0008595 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009790 GO:0009791 GO:0009792 GO:0009798 GO:0009880 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009913 GO:0009948 GO:0009952 GO:0009966 GO:0009987 GO:0009994 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0016020 GO:0016043 GO:0016323 GO:0016327 GO:0016328 GO:0016331 GO:0016332 GO:0016333 GO:0016334 GO:0016335 GO:0016336 GO:0019219 GO:0019222 GO:0019953 GO:0019991 GO:0021700 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0030010 GO:0030011 GO:0030030 GO:0030054 GO:0030100 GO:0030154 GO:0030182 GO:0030707 GO:0030714 GO:0030855 GO:0030859 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031594 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032989 GO:0033036 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035088 GO:0035089 GO:0035090 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035282 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0040008 GO:0042048 GO:0042058 GO:0042067 GO:0042127 GO:0042221 GO:0042706 GO:0043296 GO:0043297 GO:0044085 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045165 GO:0045169 GO:0045175 GO:0045178 GO:0045186 GO:0045197 GO:0045198 GO:0045199 GO:0045202 GO:0045216 GO:0045570 GO:0045571 GO:0045892 GO:0045926 GO:0045934 GO:0046425 GO:0046530 GO:0046552 GO:0046620 GO:0046621 GO:0048056 GO:0048468 GO:0048469 GO:0048477 GO:0048513 GO:0048519 GO:0048523 GO:0048563 GO:0048569 GO:0048583 GO:0048592 GO:0048598 GO:0048599 GO:0048609 GO:0048638 GO:0048640 GO:0048663 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048863 GO:0048869 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050877 GO:0050890 GO:0050896 GO:0051049 GO:0051093 GO:0051128 GO:0051171 GO:0051172 GO:0051179 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0060429 GO:0060562 GO:0060581 GO:0060627 GO:0061162 GO:0061245 GO:0061326 GO:0061339 GO:0065007 GO:0065008 GO:0070160 GO:0071840 GO:0071944 GO:0072001 GO:0072002 GO:0072089 GO:0080090 GO:0090162 GO:0090596 GO:0097574 GO:0098590 GO:0099568 GO:0120036 GO:1901184 GO:1902531 GO:1902679 GO:1903506 GO:1903507 GO:1904892 GO:1990794 GO:2000026 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8

Protein Analysis

556

Amino Acids

62.11

Weight (kDa)

5.41

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 228 - 285 2.2e-08 Leucine rich repeat
LRR_14 PF23598 261 - 351 3.2e-11 Leucine-rich repeat region
LRR_8 PF13855 273 - 331 2e-07 Leucine rich repeat
LRR_14 PF23598 315 - 418 5.3e-12 Leucine-rich repeat region
LRR_8 PF13855 343 - 400 1.6e-08 Leucine rich repeat
LRR_14 PF23598 424 - 468 2.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016857)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g21720
malus_domestica MD06G1032200.v1.1
prunus_persica Prupe.1G323800_v2.0.a1 Prupe.5G039900_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0209221
rosa_laevigata RLG00000003156
rosa_multiflora Rmu_sc0001701.1_g000009
rosa_roxburghii Rroxscaffold_3G00249620
rosa_rugosa Rorug07G0110400
rosa_samantha Rh7AG244400 Rh7BG239700 Rh7CG259900 Rh7DG251200
rosa_wichuraiana Rw7G020730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 220
Acc36I ACCTGC 1 cut(s) 220
Acc65I GGTACC 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 1288
AciI CCGC 2 cut(s) 1286, 1288
AclWI GGATC 3 cut(s) 1011, 1024, 1099
AcsI RAATTY 1 cut(s) 1048
AcuI CTGAAG 4 cut(s) 168, 225, 522, 1403
AfaI GTAC 3 cut(s) 395, 1524, 1562
AfiI CCNNNNNNNGG 3 cut(s) 403, 718, 737
AflIII ACRYGT 1 cut(s) 1429
AjnI CCWGG 1 cut(s) 421
AloI GAACNNNNNNTCC 2 cut(s) 597, 629
Alw21I GWGCWC 2 cut(s) 132, 1069
Alw26I GTCTC 1 cut(s) 154
AlwI GGATC 3 cut(s) 1011, 1024, 1099
Ama87I CYCGRG 2 cut(s) 1073, 1211
AoxI GGCC 3 cut(s) 92, 325, 742
ApeKI GCWGC 5 cut(s) 116, 226, 575, 1039, 1592
ApoI RAATTY 1 cut(s) 1048
Asp700I GAANNNNTTC 2 cut(s) 612, 1388
Asp718I GGTACC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 349, 1236
AspS9I GGNCC 4 cut(s) 187, 240, 247, 1445
AsuHPI GGTGA 5 cut(s) 244, 371, 460, 821, 916
AvaI CYCGRG 2 cut(s) 1073, 1211
AvaII GGWCC 4 cut(s) 187, 240, 247, 1445
AxyI CCTNAGG 1 cut(s) 1449
BamHI GGATCC 1 cut(s) 1016
BanI GGYRCC 1 cut(s) 393
BanII GRGCYC 1 cut(s) 1069
BbsI GAAGAC 1 cut(s) 971
Bbv12I GWGCWC 2 cut(s) 132, 1069
BbvI GCAGC 5 cut(s) 128, 213, 587, 1026, 1579
BccI CCATC 4 cut(s) 37, 317, 491, 1579
BcgI CGANNNNNNTGC 2 cut(s) 1012, 1046
BciT130I CCWGG 1 cut(s) 423
BclI TGATCA 3 cut(s) 885, 954, 1336
BcoDI GTCTC 1 cut(s) 154
BfaI CTAG 2 cut(s) 1518, 1669
BfmI CTRYAG 1 cut(s) 227
BfuAI ACCTGC 1 cut(s) 220
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 6 cut(s) 117, 227, 576, 1040, 1286, 1593
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 6 cut(s) 118, 228, 577, 1041, 1287, 1594
BmcAI AGTACT 1 cut(s) 1524
Bme1390I CCNGG 1 cut(s) 423
Bme18I GGWCC 4 cut(s) 187, 240, 247, 1445
BmeT110I CYCGRG 2 cut(s) 1073, 1211
BmgT120I GGNCC 4 cut(s) 187, 240, 247, 1445
BmiI GGNNCC 4 cut(s) 189, 395, 1018, 1446
BmrFI CCNGG 1 cut(s) 423
BmrI ACTGGG 1 cut(s) 392
BmsI GCATC 2 cut(s) 1299, 1579
BmuI ACTGGG 1 cut(s) 392
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 971
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuEI CTTGAG 3 cut(s) 185, 1013, 1325
BsaBI GATNNNNATC 2 cut(s) 834, 856
BsaJI CCNNGG 5 cut(s) 89, 243, 422, 1074, 1286
BsaXI ACNNNNNCTCC 2 cut(s) 597, 627
Bsc4I CCNNNNNNNGG 3 cut(s) 403, 718, 737
Bse1I ACTGG 3 cut(s) 398, 659, 1438
Bse21I CCTNAGG 1 cut(s) 1449
Bse8I GATNNNNATC 2 cut(s) 834, 856
BseBI CCWGG 1 cut(s) 423
BseDI CCNNGG 5 cut(s) 89, 243, 422, 1074, 1286
BseGI GGATG 2 cut(s) 29, 1594
BseJI GATNNNNATC 2 cut(s) 834, 856
BseLI CCNNNNNNNGG 3 cut(s) 403, 718, 737
BseMII CTCAG 5 cut(s) 276, 540, 681, 1026, 1463
BseNI ACTGG 3 cut(s) 398, 659, 1438
BseRI GAGGAG 3 cut(s) 182, 250, 286
BseXI GCAGC 5 cut(s) 128, 213, 587, 1026, 1579
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 1006
Bsh1236I CGCG 1 cut(s) 1288
BshFI GGCC 3 cut(s) 94, 327, 744
BshNI GGYRCC 1 cut(s) 393
BsiHKAI GWGCWC 2 cut(s) 132, 1069
BsiHKCI CYCGRG 2 cut(s) 1073, 1211
BslFI GGGAC 2 cut(s) 173, 185
BslI CCNNNNNNNGG 3 cut(s) 403, 718, 737
BsmAI GTCTC 1 cut(s) 154
BsmFI GGGAC 2 cut(s) 173, 185
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 3 cut(s) 94, 327, 744
BsoBI CYCGRG 2 cut(s) 1073, 1211
Bsp1286I GDGCHC 2 cut(s) 132, 1069
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 2 cut(s) 1286, 1288
BspANI GGCC 3 cut(s) 94, 327, 744
BspCNI CTCAG 5 cut(s) 277, 541, 682, 1027, 1462
BspFNI CGCG 1 cut(s) 1288
BspHI TCATGA 2 cut(s) 63, 894
BspLI GGNNCC 4 cut(s) 189, 395, 1018, 1446
BspMAI CTGCAG 1 cut(s) 231
BspMI ACCTGC 1 cut(s) 220
BspPI GGATC 3 cut(s) 1011, 1024, 1099
BspT107I GGYRCC 1 cut(s) 393
BsrI ACTGG 3 cut(s) 398, 659, 1438
BssECI CCNNGG 5 cut(s) 89, 243, 422, 1074, 1286
BssT1I CCWWGG 2 cut(s) 89, 243
Bst2UI CCWGG 1 cut(s) 423
Bst4CI ACNGT 4 cut(s) 52, 139, 440, 1114
Bst6I CTCTTC 5 cut(s) 51, 99, 218, 477, 1311
BstC8I GCNNGC 1 cut(s) 1461
BstDEI CTNAG 8 cut(s) 285, 549, 623, 690, 1035, 1061, 1160, 1449
BstDSI CCRYGG 2 cut(s) 243, 1286
BstF5I GGATG 2 cut(s) 29, 1594
BstFNI CGCG 1 cut(s) 1288
BstHHI GCGC 2 cut(s) 349, 1236
BstMAI GTCTC 1 cut(s) 154
BstMWI GCNNNNNNNGC 2 cut(s) 91, 1469
BstNI CCWGG 1 cut(s) 423
BstNSI RCATGY 2 cut(s) 1433, 1463
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 1 cut(s) 421
BstSFI CTRYAG 1 cut(s) 227
BstUI CGCG 1 cut(s) 1288
BstV1I GCAGC 5 cut(s) 128, 213, 587, 1026, 1579
BstV2I GAAGAC 1 cut(s) 971
BstX2I RGATCY 2 cut(s) 1016, 1104
BstYI RGATCY 2 cut(s) 1016, 1104
Bsu36I CCTNAGG 1 cut(s) 1449
BsuRI GGCC 3 cut(s) 94, 327, 744
BtgI CCRYGG 2 cut(s) 243, 1286
BtsCI GGATG 2 cut(s) 29, 1594
BtsI GCAGTG 3 cut(s) 80, 591, 1236
BtsIMutI CAGTG 8 cut(s) 57, 80, 144, 591, 687, 825, 1236, 1336
BveI ACCTGC 1 cut(s) 220
Cac8I GCNNGC 1 cut(s) 1461
CciI TCATGA 2 cut(s) 63, 894
CfoI GCGC 2 cut(s) 349, 1236
Cfr13I GGNCC 4 cut(s) 187, 240, 247, 1445
Cfr42I CCGCGG 1 cut(s) 1289
Csp6I GTAC 3 cut(s) 394, 1523, 1561
CspCI CAANNNNNGTGG 4 cut(s) 165, 200, 632, 667
CviQI GTAC 3 cut(s) 394, 1523, 1561
DdeI CTNAG 8 cut(s) 285, 549, 623, 690, 1035, 1061, 1160, 1449
Eam1104I CTCTTC 5 cut(s) 51, 99, 218, 477, 1311
EarI CTCTTC 5 cut(s) 51, 99, 218, 477, 1311
Ecl136II GAGCTC 1 cut(s) 1067
Eco130I CCWWGG 2 cut(s) 89, 243
Eco147I AGGCCT 1 cut(s) 94
Eco24I GRGCYC 1 cut(s) 1069
Eco32I GATATC 2 cut(s) 174, 1327
Eco47I GGWCC 4 cut(s) 187, 240, 247, 1445
Eco53kI GAGCTC 1 cut(s) 1067
Eco57I CTGAAG 4 cut(s) 168, 225, 522, 1403
Eco81I CCTNAGG 1 cut(s) 1449
Eco88I CYCGRG 2 cut(s) 1073, 1211
EcoICRI GAGCTC 1 cut(s) 1067
EcoO109I RGGNCCY 1 cut(s) 1445
EcoRII CCWGG 1 cut(s) 421
EcoRV GATATC 2 cut(s) 174, 1327
EcoT14I CCWWGG 2 cut(s) 89, 243
EcoT22I ATGCAT 1 cut(s) 1461
EcoT38I GRGCYC 1 cut(s) 1069
ErhI CCWWGG 2 cut(s) 89, 243
FalI AAGNNNNNCTT 4 cut(s) 600, 632, 752, 784
FaqI GGGAC 2 cut(s) 173, 185
FbaI TGATCA 3 cut(s) 885, 954, 1336
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 117, 227, 576, 1040, 1286, 1593
FokI GGATG 2 cut(s) 16, 1601
FriOI GRGCYC 1 cut(s) 1069
Fsp4HI GCNGC 6 cut(s) 117, 227, 576, 1040, 1286, 1593
FspBI CTAG 2 cut(s) 1518, 1669
GlaI GCGC 2 cut(s) 348, 1235
GluI GCNGC 6 cut(s) 117, 227, 576, 1040, 1286, 1593
GsaI CCCAGC 1 cut(s) 38
HaeIII GGCC 3 cut(s) 94, 327, 744
HhaI GCGC 2 cut(s) 349, 1236
Hin6I GCGC 2 cut(s) 347, 1234
HinP1I GCGC 2 cut(s) 347, 1234
HincII GTYRAC 2 cut(s) 142, 766
HindII GTYRAC 2 cut(s) 142, 766
HinfI GANTC 9 cut(s) 376, 545, 714, 800, 898, 1128, 1156, 1202, 1528
HphI GGTGA 5 cut(s) 244, 371, 460, 821, 916
Hpy166II GTNNAC 3 cut(s) 142, 766, 1117
Hpy188I TCNGA 8 cut(s) 258, 286, 315, 336, 550, 706, 878, 1016
Hpy8I GTNNAC 3 cut(s) 142, 766, 1117
HpyAV CCTTC 9 cut(s) 49, 105, 175, 364, 562, 803, 1165, 1378, 1615
HpyCH4III ACNGT 4 cut(s) 52, 139, 440, 1114
HpyCH4V TGCA 8 cut(s) 229, 575, 845, 1023, 1042, 1229, 1459, 1595
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 1469
HpyF3I CTNAG 8 cut(s) 285, 549, 623, 690, 1035, 1061, 1160, 1449
HspAI GCGC 2 cut(s) 347, 1234
KpnI GGTACC 1 cut(s) 397
Ksp22I TGATCA 3 cut(s) 885, 954, 1336
KspI CCGCGG 1 cut(s) 1289
LmnI GCTCC 2 cut(s) 1174, 1661
Lsp1109I GCAGC 5 cut(s) 128, 213, 587, 1026, 1579
LweI GCATC 2 cut(s) 1299, 1579
MaeI CTAG 2 cut(s) 1518, 1669
MaeIII GTNAC 3 cut(s) 78, 359, 685
MfeI CAATTG 2 cut(s) 1080, 1293
MflI RGATCY 2 cut(s) 1016, 1104
MhlI GDGCHC 2 cut(s) 132, 1069
MlyI GAGTC 2 cut(s) 554, 794
MmeI TCCRAC 2 cut(s) 675, 1302
Mph1103I ATGCAT 1 cut(s) 1461
MroXI GAANNNNTTC 2 cut(s) 612, 1388
MseI TTAA 4 cut(s) 516, 557, 747, 755
MslI CAYNNNNRTG 1 cut(s) 125
MspA1I CMGCKG 1 cut(s) 1288
MspR9I CCNGG 1 cut(s) 423
MunI CAATTG 2 cut(s) 1080, 1293
Mva1269I GAATGC 1 cut(s) 979
MvaI CCWGG 1 cut(s) 423
MvnI CGCG 1 cut(s) 1288
MwoI GCNNNNNNNGC 2 cut(s) 91, 1469
NcoI CCATGG 1 cut(s) 243
NlaIV GGNNCC 4 cut(s) 189, 395, 1018, 1446
NmuCI GTSAC 3 cut(s) 78, 359, 685
NsiI ATGCAT 1 cut(s) 1461
NspI RCATGY 2 cut(s) 1433, 1463
PaeI GCATGC 1 cut(s) 1463
PagI TCATGA 2 cut(s) 63, 894
PaqCI CACCTGC 1 cut(s) 220
PceI AGGCCT 1 cut(s) 94
PciI ACATGT 1 cut(s) 1429
PctI GAATGC 1 cut(s) 979
PdmI GAANNNNTTC 2 cut(s) 612, 1388
PfeI GAWTC 7 cut(s) 376, 714, 898, 1128, 1156, 1202, 1528
PkrI GCNGC 6 cut(s) 118, 228, 577, 1041, 1287, 1594
PleI GAGTC 2 cut(s) 553, 794
PpsI GAGTC 2 cut(s) 553, 794
PpuMI RGGWCCY 1 cut(s) 1445
PscI ACATGT 1 cut(s) 1429
PshAI GACNNNNGTC 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 1069
Psp5II RGGWCCY 1 cut(s) 1445
Psp6I CCWGG 1 cut(s) 421
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 421
PspN4I GGNNCC 4 cut(s) 189, 395, 1018, 1446
PspPI GGNCC 4 cut(s) 187, 240, 247, 1445
PspPPI RGGWCCY 1 cut(s) 1445
PstI CTGCAG 1 cut(s) 231
PsuI RGATCY 2 cut(s) 1016, 1104
RsaI GTAC 3 cut(s) 395, 1524, 1562
RsaNI GTAC 3 cut(s) 394, 1523, 1561
RseI CAYNNNNRTG 1 cut(s) 125
SacI GAGCTC 1 cut(s) 1069
SacII CCGCGG 1 cut(s) 1289
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 516, 557, 747, 755
SatI GCNGC 6 cut(s) 117, 227, 576, 1040, 1286, 1593
Sau96I GGNCC 4 cut(s) 187, 240, 247, 1445
ScaI AGTACT 1 cut(s) 1524
SchI GAGTC 2 cut(s) 554, 794
ScrFI CCNGG 1 cut(s) 423
SduI GDGCHC 2 cut(s) 132, 1069
SfaNI GCATC 2 cut(s) 1299, 1579
SfcI CTRYAG 1 cut(s) 227
Sfr303I CCGCGG 1 cut(s) 1289
SgrBI CCGCGG 1 cut(s) 1289
SinI GGWCC 4 cut(s) 187, 240, 247, 1445
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 4 cut(s) 14, 164, 992, 1304
SmoI CTYRAG 4 cut(s) 14, 164, 992, 1304
SphI GCATGC 1 cut(s) 1463
SseBI AGGCCT 1 cut(s) 94
SsiI CCGC 2 cut(s) 1286, 1288
SspMI CTAG 2 cut(s) 1518, 1669
SstI GAGCTC 1 cut(s) 1069
StuI AGGCCT 1 cut(s) 94
StyD4I CCNGG 1 cut(s) 421
StyI CCWWGG 2 cut(s) 89, 243
TaaI ACNGT 4 cut(s) 52, 139, 440, 1114
TaqI TCGA 5 cut(s) 141, 1092, 1200, 1239, 1508
TatI WGTACW 2 cut(s) 1522, 1560
TauI GCSGC 1 cut(s) 1288
TfiI GAWTC 7 cut(s) 376, 714, 898, 1128, 1156, 1202, 1528
Tru1I TTAA 4 cut(s) 516, 557, 747, 755
Tru9I TTAA 4 cut(s) 516, 557, 747, 755
TscAI CASTG 8 cut(s) 57, 87, 151, 598, 694, 832, 1236, 1336
TseFI GTSAC 3 cut(s) 78, 359, 685
TseI GCWGC 5 cut(s) 116, 226, 575, 1039, 1592
Tsp45I GTSAC 3 cut(s) 78, 359, 685
TspGWI ACGGA 1 cut(s) 1382
TspRI CASTG 8 cut(s) 57, 87, 151, 598, 694, 832, 1236, 1336
VpaK11BI GGWCC 4 cut(s) 187, 240, 247, 1445
XapI RAATTY 1 cut(s) 1048
XbaI TCTAGA 1 cut(s) 1517
XceI RCATGY 2 cut(s) 1433, 1463
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 612, 1388
XspI CTAG 2 cut(s) 1518, 1669
ZrmI AGTACT 1 cut(s) 1524
Zsp2I ATGCAT 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.