Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

14578844 .. 14587994

Gene Structure 9151 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g23210.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGACCACTCTTCAAGCTTCTCTTCTCCTGAACCTCCCACTCACTCCAACCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCAAACGTCTCCACTTCTCTCGTAATTGTAGTCTTCTCTTTGTTCCCAATCTCAATGTCTCCTCATCAAGAAACTTGAGATTCAGCGGCCGGAACACGTCGATTCCCTGCGCATTGCGACCGGAGAACGCGAATTTGGATCAAGAACCGGGCTTTTCCGACACCCATTTGGATTCCGACGGTAAAGACTCGACCTTGGATGAAATTAACGGCGAGGATTTGAGCACCGGTGTCGAAAACCCCGAAAGGGAGGAGCTTGAGGCGAAGGAGGAGGTGGAGTCTGGGGGTGAGGAGAGTGCGGGAGTGGTGGAGGAGAGTGGGGGATTGGTTGGGAAGAAGAGTTGGGTTAGGTTACCAATGGTGGTGTTCTTCATTGGGTTGTGGGCGAGTGTGAGGAGAGGGGTTGAGAAGGCGTTGGCGTCGGAATGGTTCAGTTGGTGGCCGTTTTGGAGGCAGGAGAAGCGGTTGGAGAGGCTGATTGCCGAGGCCGATGCGGATCCTAAGGACCCGGTGAAGCAGAGTGCTCTGTTTGCTGAGCTCAATAAGCACAGTCCTGAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCAGGCTGTAGACAGTAGAGGAGTTGCAGAGTATCTTCGAGCTCTTGTAGTTACTGATGCTATAGCTGAATATCTTCCAAACGATGAATCTGGAAAGCCTTCCAGTCTTCCTTCACTGTTGCAAGAGCTAAAACAGCGTGCATCAGGCAACATGGATGAACCCTTTGTCAACCCTGGCATAAATGAAAAGCAACCATTGCATGTTTTGATGGTTGAACCTAAAGCATCAAACAAATCTCGTTTTACTCAAGAGCTTATCTCAACCATCTTGTTCACAGTAGCGGTTGGATTAGTCTGGTTTATGGGTGCAGCTGCTCTCCAAAAGTACATAGGGAGTTTGGGTGGAATAGGTGCTTCAGGTGTTGGCTCAAGTTCTTCCTATAGCCCAAAGGAGTTAAATAAAGAAGTGATTCCAGAAAAGAATGTTAAAACATTTAAAGATGTCAAAGGTTGTGATGATGCAAAGCAAGAGCTTGAGGAGGTAGTGGAGTACCTCAAAAATCCTACTAAGTTTACCCGCCTTGGGGGCAAGTTGCCAAAGGGAATTCTTTTGACAGGTTCACCAGGAACAGGAAAGACATTACTTGCTAAGGCTATTGCCGGAGAAGCTGGGGTACCATTTTTCTATAGAGCAGGATCTGAGTTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCCTTATTTCAGGCAGCTAAGAAAAAGGCTCCTTGCATCATTTTCATTGATGAAATAGATGCTGTTGGATCCACTCGGAAACAATGGGAAGGCCACACGAAGAAGACGCTGCATCAATTACTGGTTGAAATGGATGGTTTCGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACCAACTTGCCTGATATTCTCGATCCAGCATTGACCAGGCCCGGTCGATTCGACAGGCATATTGTTGTCCCAAATCCAGACGTGCGAGGTCGACAGGAAATATTAGAACTTTATCTTCAAGATAAGCCATTAGCTGATGATGTGGATGCTAAAGCAATAGCCCGTGGCACACCTGGATTTAATGGGGCAGATCTTGCGAACTTGGTTAACATTGCTGCCATAAAAGCTGCTGTTGAAGGGGCTGACAAGTTAACCAGTAAACAATTAGAATTTGCCAAGGACAGGATAGTGATGGGCACAGAAAGAAAAACAATGTTTGTATCTGAGGAATCAAAAAAGCTCACCGCATACCATGAAAGTGGTCATGCCATTGTTGCACTGAATACTGAGGGCGCACATCCAATCCACAAGGCTACAATCATGCCTCGTGGATCTGCTTTGGGAATGGTCACCCAACTCCCTTCAAACGACGAGACATCAGTTAGCAAGAAGCAGCTATTAGCACGTCTTGATGTCTGCATGGGAGGAAGAGTAGCAGAAGAGATCATCTTTGGTCAGGATCATGTCACAACCGGAGCTAGTAGTGATTTGCACACAGCTACAGAGCTGGCCCACTATATGGTATCAAGCTGCGGTATGAGTGACACAATTGGGCCGGTTCATATCAAAGAGCGACCTAGTTCCGAAATGCAATCTCGTATTGATGCAGAAGTTGTGAAAATGTTAAGGGAAGCATATGATCGTGTAAAAGCCCTCCTAAAGAAGCATGAGAAGGCGTTACATGCATTGGCAAATGCACTTTTGGAGTATGAGACGCTTAGTTCAGAAGAAATTAGGCGCATTCTTCTGCCATATCAGGAAGGACGGCTGCCTGAGCCACAAGAAGAGCAACAAGAAGAAGGGGATCTTGTATTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

818

Amino Acids

89.6

Weight (kDa)

5.56

Isoelectric Point (pI)

49.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	407 - 535	5.1e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	558 - 601	1.2e-09	AAA+ lid domain
Peptidase_M41	PF01434	617 - 792	4.2e-60	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	199
Acc65I	GGTACC	1 cut(s)	1288
AccB1I	GGYRCC	1 cut(s)	1288
AccB7I	CCANNNNNTGG	1 cut(s)	2152
AccI	GTMKAC	2 cut(s)	684, 1624
AccII	CGCG	1 cut(s)	218
AciI	CCGC	8 cut(s)	174, 386, 550, 581, 956, 1192, 1878, 2166
AcoI	YGGCCR	2 cut(s)	175, 527
AcsI	RAATTY	3 cut(s)	220, 1218, 1802
AcuI	CTGAAG	1 cut(s)	1014
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	3 cut(s)	1001, 1166, 1290
AfeI	AGCGCT	1 cut(s)	659
AfiI	CCNNNNNNNGG	6 cut(s)	334, 1197, 1198, 1244, 1815, 2152
AflIII	ACRYGT	1 cut(s)	183
AgeI	ACCGGT	1 cut(s)	314
AgsI	TTSAA	8 cut(s)	14, 665, 890, 1322, 1487, 1652, 1769, 1998
AjiI	CACGTC	3 cut(s)	186, 1615, 2039
AjnI	CCWGG	4 cut(s)	847, 1237, 1568, 1705
AjuI	GAANNNNNNNTTGG	6 cut(s)	40, 72, 206, 238, 1317, 1349
Alw21I	GWGCWC	5 cut(s)	314, 613, 627, 718, 1348
Alw26I	GTCTC	4 cut(s)	101, 151, 2000, 2339
AlwNI	CAGNNNCTG	1 cut(s)	1313
Aor51HI	AGCGCT	1 cut(s)	659
AoxI	GGCC	7 cut(s)	175, 527, 573, 1450, 1571, 2142, 2186
ApoI	RAATTY	3 cut(s)	220, 1218, 1802
AsiGI	ACCGGT	1 cut(s)	314
Asp700I	GAANNNNTTC	3 cut(s)	747, 772, 1083
Asp718I	GGTACC	1 cut(s)	1288
AspLEI	GCGC	4 cut(s)	200, 660, 1928, 2373
AspS9I	GGNCC	4 cut(s)	592, 1572, 2143, 2186
AsuC2I	CCSGG	3 cut(s)	237, 596, 1575
AsuHPI	GGTGA	5 cut(s)	386, 610, 1227, 1867, 1975
AvaII	GGWCC	1 cut(s)	592
AxyI	CCTNAGG	1 cut(s)	588
BaeGI	GKGCMC	1 cut(s)	1832
BamHI	GGATCC	2 cut(s)	583, 1427
BanI	GGYRCC	1 cut(s)	1288
BanII	GRGCYC	2 cut(s)	627, 718
BarI	GAAGNNNNNNTAC	2 cut(s)	1272, 1304
BauI	CACGAG	1 cut(s)	1959
BbsI	GAAGAC	3 cut(s)	113, 773, 1469
Bbv12I	GWGCWC	5 cut(s)	314, 613, 627, 718, 1348
BccI	CCATC	5 cut(s)	877, 947, 1487, 1519, 1819
BceAI	ACGGC	3 cut(s)	313, 514, 2414
BcgI	CGANNNNNNTGC	4 cut(s)	301, 335, 560, 594
BciT130I	CCWGG	4 cut(s)	849, 1239, 1570, 1707
BcnI	CCSGG	3 cut(s)	237, 596, 1575
BcoDI	GTCTC	4 cut(s)	101, 151, 2000, 2339
BfaI	CTAG	2 cut(s)	2112, 2211
BfmI	CTRYAG	5 cut(s)	681, 735, 1054, 1300, 2133
BfoI	RGCGCY	1 cut(s)	661
BglI	GCCNNNNNGGC	1 cut(s)	1200
BglII	AGATCT	1 cut(s)	1723
BlpI	GCTNAGC	1 cut(s)	621
Bme1390I	CCNGG	7 cut(s)	237, 596, 849, 1239, 1570, 1575, 1707
Bme18I	GGWCC	1 cut(s)	592
BmgBI	CACGTC	3 cut(s)	186, 1615, 2039
BmgT120I	GGNCC	4 cut(s)	592, 1572, 2143, 2186
BmiI	GGNNCC	5 cut(s)	585, 594, 1290, 1389, 1429
BmrFI	CCNGG	7 cut(s)	237, 596, 849, 1239, 1570, 1575, 1707
BpiI	GAAGAC	3 cut(s)	113, 773, 1469
BplI	GAGNNNNNCTC	2 cut(s)	917, 949
Bpu10I	CCTNAGC	2 cut(s)	1263, 2406
Bpu1102I	GCTNAGC	1 cut(s)	621
BpuEI	CTTGAG	5 cut(s)	184, 365, 906, 1027, 1169
BpuMI	CCSGG	3 cut(s)	237, 596, 1575
BsaBI	GATNNNNATC	1 cut(s)	582
BsaHI	GRCGYC	1 cut(s)	506
BsaJI	CCNNGG	6 cut(s)	282, 570, 847, 1195, 1696, 1809
BsaWI	WCCGGW	3 cut(s)	208, 314, 2105
BsaXI	ACNNNNNCTCC	8 cut(s)	350, 380, 536, 566, 1000, 1030, 2049, 2079
Bsc4I	CCNNNNNNNGG	6 cut(s)	334, 1197, 1198, 1244, 1815, 2152
Bse118I	RCCGGY	2 cut(s)	314, 2188
Bse1I	ACTGG	3 cut(s)	777, 1485, 1788
Bse21I	CCTNAGG	1 cut(s)	588
Bse3DI	GCAATG	3 cut(s)	200, 869, 1743
Bse8I	GATNNNNATC	1 cut(s)	582
BseBI	CCWGG	4 cut(s)	849, 1239, 1570, 1707
BseDI	CCNNGG	6 cut(s)	282, 570, 847, 1195, 1696, 1809
BseGI	GGATG	5 cut(s)	292, 835, 1498, 1684, 1930
BseJI	GATNNNNATC	1 cut(s)	582
BseLI	CCNNNNNNNGG	6 cut(s)	334, 1197, 1198, 1244, 1815, 2152
BseMI	GCAATG	3 cut(s)	200, 869, 1743
BseMII	CTCAG	6 cut(s)	612, 633, 1305, 1848, 1911, 2397
BseNI	ACTGG	3 cut(s)	777, 1485, 1788
BseRI	GAGGAG	8 cut(s)	139, 353, 371, 392, 413, 496, 708, 1166
BseSI	GKGCMC	1 cut(s)	1832
BseX3I	CGGCCG	1 cut(s)	175
BseYI	CCCAGC	1 cut(s)	1283
BsgI	GTGCAG	1 cut(s)	1002
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	3 cut(s)	178, 209, 1579
BshFI	GGCC	7 cut(s)	177, 529, 575, 1452, 1573, 2144, 2188
BshNI	GGYRCC	1 cut(s)	1288
BshTI	ACCGGT	1 cut(s)	314
BsiEI	CGRYCG	3 cut(s)	178, 209, 1579
BsiHKAI	GWGCWC	5 cut(s)	314, 613, 627, 718, 1348
BsiSI	CCGG	9 cut(s)	178, 209, 236, 315, 596, 1275, 1575, 2106, 2189
BslFI	GGGAC	1 cut(s)	1586
BslI	CCNNNNNNNGG	6 cut(s)	334, 1197, 1198, 1244, 1815, 2152
BsmAI	GTCTC	4 cut(s)	101, 151, 2000, 2339
BsmBI	CGTCTC	2 cut(s)	101, 2339
BsmFI	GGGAC	1 cut(s)	1586
BsmI	GAATGC	1 cut(s)	2373
BsnI	GGCC	7 cut(s)	177, 529, 575, 1452, 1573, 2144, 2188
Bsp1286I	GDGCHC	6 cut(s)	314, 613, 627, 718, 1348, 1832
Bsp1720I	GCTNAGC	1 cut(s)	621
BspACI	CCGC	8 cut(s)	174, 386, 550, 581, 956, 1192, 1878, 2166
BspANI	GGCC	7 cut(s)	177, 529, 575, 1452, 1573, 2144, 2188
BspCNI	CTCAG	6 cut(s)	613, 634, 1306, 1849, 1912, 2398
BspFNI	CGCG	1 cut(s)	218
BspLI	GGNNCC	5 cut(s)	585, 594, 1290, 1389, 1429
BspQI	GCTCTTC	1 cut(s)	2412
BspT107I	GGYRCC	1 cut(s)	1288
BsrDI	GCAATG	3 cut(s)	200, 869, 1743
BsrFI	RCCGGY	2 cut(s)	314, 2188
BsrI	ACTGG	3 cut(s)	777, 1485, 1788
BssAI	RCCGGY	2 cut(s)	314, 2188
BssECI	CCNNGG	6 cut(s)	282, 570, 847, 1195, 1696, 1809
BssNI	GRCGYC	1 cut(s)	506
BssSI	CACGAG	1 cut(s)	1959
BssT1I	CCWWGG	3 cut(s)	282, 1195, 1809
Bst2BI	CACGAG	1 cut(s)	1959
Bst2UI	CCWGG	4 cut(s)	849, 1239, 1570, 1707
Bst4CI	ACNGT	5 cut(s)	269, 638, 689, 792, 952
Bst6I	CTCTTC	7 cut(s)	15, 27, 61, 419, 2056, 2067, 2412
BstACI	GRCGYC	1 cut(s)	506
BstAPI	GCANNNNNTGC	2 cut(s)	871, 1727
BstC8I	GCNNGC	2 cut(s)	813, 2142
BstDSI	CCRYGG	1 cut(s)	1696
BstEII	GGTNACC	2 cut(s)	438, 1981
BstF5I	GGATG	5 cut(s)	292, 835, 1498, 1684, 1930
BstFNI	CGCG	1 cut(s)	218
BstH2I	RGCGCY	1 cut(s)	661
BstHHI	GCGC	4 cut(s)	200, 660, 1928, 2373
BstMAI	GTCTC	4 cut(s)	101, 151, 2000, 2339
BstMCI	CGRYCG	3 cut(s)	178, 209, 1579
BstNI	CCWGG	4 cut(s)	849, 1239, 1570, 1707
BstNSI	RCATGY	2 cut(s)	878, 2318
BstPI	GGTNACC	2 cut(s)	438, 1981
BstSCI	CCNGG	7 cut(s)	235, 594, 847, 1237, 1568, 1573, 1705
BstSFI	CTRYAG	5 cut(s)	681, 735, 1054, 1300, 2133
BstSLI	GKGCMC	1 cut(s)	1832
BstUI	CGCG	1 cut(s)	218
BstV2I	GAAGAC	3 cut(s)	113, 773, 1469
BstX2I	RGATCY	7 cut(s)	583, 1310, 1358, 1427, 1723, 1964, 2437
BstXI	CCANNNNNNTGG	1 cut(s)	1892
BstYI	RGATCY	7 cut(s)	583, 1310, 1358, 1427, 1723, 1964, 2437
BstZI	CGGCCG	1 cut(s)	175
Bsu36I	CCTNAGG	1 cut(s)	588
BsuRI	GGCC	7 cut(s)	177, 529, 575, 1452, 1573, 2144, 2188
BtgI	CCRYGG	1 cut(s)	1696
BtrI	CACGTC	3 cut(s)	186, 1615, 2039
BtsCI	GGATG	5 cut(s)	292, 835, 1498, 1684, 1930
BtsIMutI	CAGTG	2 cut(s)	788, 1910
Cac8I	GCNNGC	2 cut(s)	813, 2142
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	4 cut(s)	200, 660, 1928, 2373
Cfr10I	RCCGGY	2 cut(s)	314, 2188
Cfr13I	GGNCC	4 cut(s)	592, 1572, 2143, 2186
CseI	GACGC	3 cut(s)	495, 1474, 2356
Csp6I	GTAC	3 cut(s)	1000, 1165, 1289
CspAI	ACCGGT	1 cut(s)	314
CviAII	CATG	9 cut(s)	826, 875, 1886, 1898, 1954, 2053, 2096, 2300, 2315
CviQI	GTAC	3 cut(s)	1000, 1165, 1289
DraI	TTTAAA	1 cut(s)	1111
EaeI	YGGCCR	2 cut(s)	175, 527
EagI	CGGCCG	1 cut(s)	175
Eam1104I	CTCTTC	7 cut(s)	15, 27, 61, 419, 2056, 2067, 2412
EarI	CTCTTC	7 cut(s)	15, 27, 61, 419, 2056, 2067, 2412
Ecl136II	GAGCTC	2 cut(s)	625, 716
EclXI	CGGCCG	1 cut(s)	175
Eco130I	CCWWGG	3 cut(s)	282, 1195, 1809
Eco24I	GRGCYC	2 cut(s)	627, 718
Eco47I	GGWCC	1 cut(s)	592
Eco47III	AGCGCT	1 cut(s)	659
Eco52I	CGGCCG	1 cut(s)	175
Eco53kI	GAGCTC	2 cut(s)	625, 716
Eco57I	CTGAAG	1 cut(s)	1014
Eco81I	CCTNAGG	1 cut(s)	588
Eco91I	GGTNACC	2 cut(s)	438, 1981
EcoICRI	GAGCTC	2 cut(s)	625, 716
EcoO109I	RGGNCCY	1 cut(s)	592
EcoO65I	GGTNACC	2 cut(s)	438, 1981
EcoRI	GAATTC	1 cut(s)	1218
EcoRII	CCWGG	4 cut(s)	847, 1237, 1568, 1705
EcoT14I	CCWWGG	3 cut(s)	282, 1195, 1809
EcoT22I	ATGCAT	1 cut(s)	2320
EcoT38I	GRGCYC	2 cut(s)	627, 718
ErhI	CCWWGG	3 cut(s)	282, 1195, 1809
Esp3I	CGTCTC	2 cut(s)	101, 2339
FaeI	CATG	9 cut(s)	829, 878, 1889, 1901, 1957, 2056, 2099, 2303, 2318
FalI	AAGNNNNNCTT	2 cut(s)	38, 2424
FaqI	GGGAC	1 cut(s)	1586
FatI	CATG	9 cut(s)	825, 874, 1885, 1897, 1953, 2052, 2095, 2299, 2314
FauI	CCCGC	2 cut(s)	379, 1199
FauNDI	CATATG	1 cut(s)	2269
FblI	GTMKAC	2 cut(s)	684, 1624
FokI	GGATG	5 cut(s)	299, 842, 1505, 1691, 1917
FriOI	GRGCYC	2 cut(s)	627, 718
FspBI	CTAG	2 cut(s)	2112, 2211
FspI	TGCGCA	1 cut(s)	199
GlaI	GCGC	4 cut(s)	199, 659, 1927, 2372
GsaI	CCCAGC	1 cut(s)	1287
HaeII	RGCGCY	1 cut(s)	661
HaeIII	GGCC	7 cut(s)	177, 529, 575, 1452, 1573, 2144, 2188
HapII	CCGG	9 cut(s)	178, 209, 236, 315, 596, 1275, 1575, 2106, 2189
HgaI	GACGC	3 cut(s)	495, 1474, 2356
HhaI	GCGC	4 cut(s)	200, 660, 1928, 2373
Hin1I	GRCGYC	1 cut(s)	506
Hin1II	CATG	9 cut(s)	829, 878, 1889, 1901, 1957, 2056, 2099, 2303, 2318
Hin6I	GCGC	4 cut(s)	198, 658, 1926, 2371
HinP1I	GCGC	4 cut(s)	198, 658, 1926, 2371
HincII	GTYRAC	4 cut(s)	844, 1625, 1741, 1785
HindII	GTYRAC	4 cut(s)	844, 1625, 1741, 1785
HindIII	AAGCTT	1 cut(s)	15
HpaI	GTTAAC	2 cut(s)	1741, 1785
HpaII	CCGG	9 cut(s)	178, 209, 236, 315, 596, 1275, 1575, 2106, 2189
HphI	GGTGA	5 cut(s)	386, 610, 1227, 1867, 1975
Hpy166II	GTNNAC	9 cut(s)	685, 844, 948, 1188, 1235, 1625, 1741, 1785, 1793
Hpy188I	TCNGA	9 cut(s)	247, 265, 511, 1315, 1437, 1524, 1858, 2218, 2359
Hpy8I	GTNNAC	9 cut(s)	685, 844, 948, 1188, 1235, 1625, 1741, 1785, 1793
Hpy99I	CGWCG	4 cut(s)	190, 269, 511, 2006
HpyCH4III	ACNGT	5 cut(s)	269, 638, 689, 792, 952
HpyCH4IV	ACGT	4 cut(s)	94, 185, 1614, 2038
HpySE526I	ACGT	4 cut(s)	94, 185, 1614, 2038
Hsp92I	GRCGYC	1 cut(s)	506
Hsp92II	CATG	9 cut(s)	829, 878, 1889, 1901, 1957, 2056, 2099, 2303, 2318
HspAI	GCGC	4 cut(s)	198, 658, 1926, 2371
KpnI	GGTACC	1 cut(s)	1292
KspAI	GTTAAC	2 cut(s)	1741, 1785
LguI	GCTCTTC	1 cut(s)	2412
LmnI	GCTCC	3 cut(s)	340, 1393, 2108
MaeI	CTAG	2 cut(s)	2112, 2211
MaeII	ACGT	4 cut(s)	94, 185, 1614, 2038
MaeIII	GTNAC	6 cut(s)	438, 724, 1981, 2098, 2174, 2310
MfeI	CAATTG	1 cut(s)	2181
MflI	RGATCY	7 cut(s)	583, 1310, 1358, 1427, 1723, 1964, 2437
MhlI	GDGCHC	6 cut(s)	314, 613, 627, 718, 1348, 1832
MlyI	GAGTC	3 cut(s)	269, 374, 653
MmeI	TCCRAC	8 cut(s)	71, 270, 288, 489, 534, 940, 1315, 1405
Mph1103I	ATGCAT	1 cut(s)	2320
MroXI	GAANNNNTTC	3 cut(s)	747, 772, 1083
MseI	TTAA	8 cut(s)	294, 1070, 1101, 1110, 1713, 1740, 1784, 2258
MslI	CAYNNNNRTG	1 cut(s)	1890
MspA1I	CMGCKG	2 cut(s)	174, 986
MspI	CCGG	9 cut(s)	178, 209, 236, 315, 596, 1275, 1575, 2106, 2189
MspR9I	CCNGG	7 cut(s)	237, 596, 849, 1239, 1570, 1575, 1707
MunI	CAATTG	1 cut(s)	2181
Mva1269I	GAATGC	1 cut(s)	2373
MvaI	CCWGG	4 cut(s)	849, 1239, 1570, 1707
MvnI	CGCG	1 cut(s)	218
NciI	CCSGG	3 cut(s)	237, 596, 1575
NdeI	CATATG	1 cut(s)	2269
NlaIII	CATG	9 cut(s)	829, 878, 1889, 1901, 1957, 2056, 2099, 2303, 2318
NlaIV	GGNNCC	5 cut(s)	585, 594, 1290, 1389, 1429
NmeAIII	GCCGAG	2 cut(s)	595, 1327
NmuCI	GTSAC	3 cut(s)	1981, 2098, 2174
NsbI	TGCGCA	1 cut(s)	199
NsiI	ATGCAT	1 cut(s)	2320
NspI	RCATGY	2 cut(s)	878, 2318
PciSI	GCTCTTC	1 cut(s)	2412
PcsI	WCGNNNNNNNCGW	1 cut(s)	327
PctI	GAATGC	1 cut(s)	2373
PdmI	GAANNNNTTC	3 cut(s)	747, 772, 1083
PfeI	GAWTC	7 cut(s)	168, 190, 260, 761, 1084, 1581, 1862
PflMI	CCANNNNNTGG	1 cut(s)	2152
PinAI	ACCGGT	1 cut(s)	314
PleI	GAGTC	3 cut(s)	269, 373, 652
PpsI	GAGTC	3 cut(s)	269, 373, 652
PpuMI	RGGWCCY	1 cut(s)	592
Psp124BI	GAGCTC	2 cut(s)	627, 718
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	4 cut(s)	847, 1237, 1568, 1705
PspEI	GGTNACC	2 cut(s)	438, 1981
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	4 cut(s)	847, 1237, 1568, 1705
PspN4I	GGNNCC	5 cut(s)	585, 594, 1290, 1389, 1429
PspPI	GGNCC	4 cut(s)	592, 1572, 2143, 2186
PspPPI	RGGWCCY	1 cut(s)	592
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	7 cut(s)	583, 1310, 1358, 1427, 1723, 1964, 2437
PvuII	CAGCTG	1 cut(s)	986
RsaI	GTAC	3 cut(s)	1001, 1166, 1290
RsaNI	GTAC	3 cut(s)	1000, 1165, 1289
RseI	CAYNNNNRTG	1 cut(s)	1890
SacI	GAGCTC	2 cut(s)	627, 718
SalI	GTCGAC	1 cut(s)	1623
SapI	GCTCTTC	1 cut(s)	2412
SaqAI	TTAA	8 cut(s)	294, 1070, 1101, 1110, 1713, 1740, 1784, 2258
Sau96I	GGNCC	4 cut(s)	592, 1572, 2143, 2186
SchI	GAGTC	3 cut(s)	269, 374, 653
ScrFI	CCNGG	7 cut(s)	237, 596, 849, 1239, 1570, 1575, 1707
SduI	GDGCHC	6 cut(s)	314, 613, 627, 718, 1348, 1832
SfcI	CTRYAG	5 cut(s)	681, 735, 1054, 1300, 2133
SgrAI	CRCCGGYG	1 cut(s)	314
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	1890
SmlI	CTYRAG	5 cut(s)	163, 344, 921, 1042, 1148
SmoI	CTYRAG	5 cut(s)	163, 344, 921, 1042, 1148
SsiI	CCGC	8 cut(s)	174, 386, 550, 581, 956, 1192, 1878, 2166
SspI	AATATT	1 cut(s)	1635
SspMI	CTAG	2 cut(s)	2112, 2211
SstI	GAGCTC	2 cut(s)	627, 718
StyD4I	CCNGG	7 cut(s)	235, 594, 847, 1237, 1568, 1573, 1705
StyI	CCWWGG	3 cut(s)	282, 1195, 1809
TaaI	ACNGT	5 cut(s)	269, 638, 689, 792, 952
TaiI	ACGT	4 cut(s)	97, 188, 1617, 2041
TaqI	TCGA	9 cut(s)	188, 278, 321, 712, 1500, 1554, 1579, 1584, 1624
TatI	WGTACW	1 cut(s)	999
TauI	GCSGC	1 cut(s)	177
TfiI	GAWTC	7 cut(s)	168, 190, 260, 761, 1084, 1581, 1862
Tru1I	TTAA	8 cut(s)	294, 1070, 1101, 1110, 1713, 1740, 1784, 2258
Tru9I	TTAA	8 cut(s)	294, 1070, 1101, 1110, 1713, 1740, 1784, 2258
TscAI	CASTG	2 cut(s)	795, 1917
TseFI	GTSAC	3 cut(s)	1981, 2098, 2174
Tsp45I	GTSAC	3 cut(s)	1981, 2098, 2174
TspDTI	ATGAA	9 cut(s)	303, 448, 774, 846, 873, 1393, 1425, 1902, 2183
TspRI	CASTG	2 cut(s)	795, 1917
Van91I	CCANNNNNTGG	1 cut(s)	2152
VpaK11BI	GGWCC	1 cut(s)	592
XapI	RAATTY	3 cut(s)	220, 1218, 1802
XceI	RCATGY	2 cut(s)	878, 2318
XmiI	GTMKAC	2 cut(s)	684, 1624
XmnI	GAANNNNTTC	3 cut(s)	747, 772, 1083
XspI	CTAG	2 cut(s)	2112, 2211
Zsp2I	ATGCAT	1 cut(s)	2320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.