Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

29070491 .. 29079770

Gene Structure 9280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG270800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGACTACTCTGCAAGCTTCGCTTCTCCTTAACCTCCCACTCACTCCAACTCTTTCTTCTTCTTCTTCTTCTTCACTCAAACGCTTTCACTTCTCTCGCTCGGGTTGTTATAGTTGCAGCCCTGTTTTTCTTCCCAATATCAATGTCTCGTCATCGCCGAGCTCAAGAAATTTCAGATTCAGCGGTCGAAACACGTCGATTCCCTGCACATTGCGCCCGGAGAACGCGAATTTGGATCAAGAATCGAACTTTGTCGACACCCGTTTGGATTCCGAGGGGAAAGAATCGAGCTTGGATGAAATTAACGGCGGGGATTTGAGTAATAGCTCGGTTGCCGGAGCCGAAAGTGAGAAACTTGAGGCGAAGGAGCAGTCTGGGGAGGTGGGTTTGGAGAATGGGGGTGAGGAGAGTGAGGGAGTGGTGGTGGAGAGTGAGGGAAAGAGTGGGGGTTTGGTTGGGAAGAAGAGTGGGAATGGGTTGCCATTGGTGGTGTTCTTCATGGGGTTGTGGGCAACTGCAAGGAGAGGGTTTGAGAAGGCGTTGGCGTCGGAATGGTTCAGTTGGTGGCCCTTTTGGCGGCAGGAGAAGCGGTTGGAGAGGCTGATTGCGGAGGCGGATGCGGATCCCAAGGACCCGGTGAAGCAGAGTGCTCTGTTTGCTGAGCTCAATAAGCACAGTCCTGAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCACGTTGTAGACAGTAGAGGAGTTGCAGAGTATCTTCGAGCTCTTGTGGTCACTGATGCTATAGCTGAATATCTTCCAAACGATGAATCTGGAAAGCCTTCTACTCTTCCTTCGCTGTTGCAAGAATTGAAACAGCGTGCATCAGGCAACTTGGATGAACCCTTTGTCAAACCTGGCATAAATGAGAAGCAGCCATTGCACGTGCTGATGGTTGAACCGAAAGTATCAAACAAATCTCGTTTTACTCAAGAGCTTGTCTCAACCATCTTGTTCACAGTTGCGGTTGGATTAGTGTGGTTTATGGGTGCAGCTGCTCTTCAAAAGTACATAGGGAGCTTGGGTGGAATAGGTGCTTCAGGTGTTGGCTCAGGTTCTTCCTATACCCCAAAAGAGTTGAATAAAGAAGTGATTCCAGAAAAGAATGTTAAAACCTTTAAAGATGTCAAAGGCTGTGATGATGCAAAGCAAGAGCTTGAGGAGGTAGTGGAGTACCTCAAAAACCCAACTAAATTTACCCGCCTTGGGGGCAAGTTGCCAAAGGGAATTCTTTTGACAGGAGCACCAGGAACAGGAAAGACATTACTTGCTAAGGCTATTGCTGGAGAAGCTGGGGTGCCATTTTTCTATAGAGCAGGATCTGAGTTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCGTTATTTCAAGCAGCTAAGAAAAAGGCTCCTTGCATCATTTTCATTGATGAAATAGATGCTGTTGGATCCACTCGGAAACAATGGGAAGGGCACACAAAGAAGACGCTGCATCAATTACTGGTTGAAATGGATGGTTTCGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACCAACTTGCCTGATATTCTTGATCCAGCATTGACCAGGCCCGGTCGATTCGACAGGCATATTGTTGTTCCAAATCCAGACGTTCGAGGTCGTCAAGAGATATTGGAACTTTATCTTCAAGATAAGCCATTAGCTGATGATGTGGATGCTAAAGCAATAGCCCGTGGCACACCAGGATTTAATGGGGCAGATCTTGCGAACTTGGTTAATATTGCTGCTATAAAAGCTGCTGTTGACGGGGCTGACAAGTTGACTGGTTCACAATTAGAATTTGCCAAGGATCGGATAGTAATGGGAACAGAACGGAAAACAATGTTCATATCTGAAGAGTCAAAAAAGCTCACCGCATACCATGAAAGTGGTCATGCAATTGTTGCTCTGAATACTGAGGGGGCACATCCAATTCACAAGGCTACAATCCTACCTCGTGGATCTGCTTTGGGAATGGTCACCCAGCTCCCTTCAAATGACGAGACATCAATTAGCAAGAAGCAGCTATTAGCTCGTCTTGATGTCTGCATGGGAGGAAGAGTAGCAGAAGAGATCATCTTTGGTCAGGATTTTGTCACAACCGGAGCAAGTAGTGATCTAAACACAGCTACAGAGCTGGCCCACTACATGGTATTTCTTTTTCCTTTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

738

Amino Acids

80.19

Weight (kDa)

5.82

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	420 - 548	5.9e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	571 - 614	4.1e-09	AAA+ lid domain
Peptidase_M41	PF01434	630 - 735	3.8e-41	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1327
AccB7I	CCANNNNNTGG	1 cut(s)	2191
AccI	GTMKAC	2 cut(s)	255, 723
AccII	CGCG	1 cut(s)	227
AcsI	RAATTY	5 cut(s)	169, 229, 1223, 1257, 1841
AcuI	CTGAAG	2 cut(s)	1053, 1917
AcvI	CACGTG	1 cut(s)	916
AcyI	GRCGYC	1 cut(s)	545
AfaI	GTAC	2 cut(s)	1040, 1205
AfeI	AGCGCT	1 cut(s)	698
AfiI	CCNNNNNNNGG	6 cut(s)	576, 1236, 1237, 1283, 1854, 2191
AflIII	ACRYGT	1 cut(s)	192
AjiI	CACGTC	1 cut(s)	195
AjnI	CCWGG	4 cut(s)	886, 1276, 1607, 1744
AjuI	GAANNNNNNNTTGG	6 cut(s)	40, 72, 215, 247, 1356, 1388
Alw21I	GWGCWC	6 cut(s)	164, 652, 666, 757, 1276, 1387
Alw26I	GTCTC	3 cut(s)	151, 976, 2039
AlwNI	CAGNNNCTG	1 cut(s)	1352
Ama87I	CYCGRG	1 cut(s)	100
Aor51HI	AGCGCT	1 cut(s)	698
AoxI	GGCC	3 cut(s)	566, 1610, 2181
ApoI	RAATTY	5 cut(s)	169, 229, 1223, 1257, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
Asp700I	GAANNNNTTC	3 cut(s)	786, 811, 1122
AspLEI	GCGC	2 cut(s)	216, 699
AspS9I	GGNCC	4 cut(s)	567, 631, 1611, 2182
AsuC2I	CCSGG	3 cut(s)	218, 635, 1614
AsuHPI	GGTGA	4 cut(s)	413, 649, 1906, 2014
AvaI	CYCGRG	1 cut(s)	100
AvaII	GGWCC	1 cut(s)	631
BaeGI	GKGCMC	2 cut(s)	1494, 1969
BamHI	GGATCC	2 cut(s)	622, 1466
BanI	GGYRCC	1 cut(s)	1327
BanII	GRGCYC	3 cut(s)	164, 666, 757
BauI	CACGAG	1 cut(s)	1998
BbrPI	CACGTG	1 cut(s)	916
BbsI	GAAGAC	1 cut(s)	1508
Bbv12I	GWGCWC	6 cut(s)	164, 652, 666, 757, 1276, 1387
BccI	CCATC	4 cut(s)	916, 986, 1526, 1558
BceAI	ACGGC	1 cut(s)	322
BciT130I	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BcnI	CCSGG	3 cut(s)	218, 635, 1614
BcoDI	GTCTC	3 cut(s)	151, 976, 2039
BfmI	CTRYAG	3 cut(s)	774, 1339, 2172
BfoI	RGCGCY	1 cut(s)	700
BglI	GCCNNNNNGGC	2 cut(s)	574, 1239
BglII	AGATCT	1 cut(s)	1762
BlpI	GCTNAGC	1 cut(s)	660
Bme1390I	CCNGG	7 cut(s)	218, 635, 888, 1278, 1609, 1614, 1746
Bme18I	GGWCC	1 cut(s)	631
BmeT110I	CYCGRG	1 cut(s)	100
BmgBI	CACGTC	1 cut(s)	195
BmgT120I	GGNCC	4 cut(s)	567, 631, 1611, 2182
BmiI	GGNNCC	6 cut(s)	340, 624, 633, 1329, 1428, 1468
BmrFI	CCNGG	7 cut(s)	218, 635, 888, 1278, 1609, 1614, 1746
BmsI	GCATC	8 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708
BpiI	GAAGAC	1 cut(s)	1508
BplI	GAGNNNNNCTC	2 cut(s)	956, 988
BpmI	CTGGAG	1 cut(s)	1335
Bpu10I	CCTNAGC	2 cut(s)	1081, 1302
Bpu1102I	GCTNAGC	1 cut(s)	660
BpuEI	CTTGAG	4 cut(s)	148, 377, 945, 1208
BpuMI	CCSGG	3 cut(s)	218, 635, 1614
BsaAI	YACGTR	1 cut(s)	916
BsaBI	GATNNNNATC	1 cut(s)	621
BsaHI	GRCGYC	1 cut(s)	545
BsaJI	CCNNGG	5 cut(s)	273, 627, 1234, 1735, 1848
BsaWI	WCCGGW	1 cut(s)	2144
BsaXI	ACNNNNNCTCC	8 cut(s)	408, 438, 575, 605, 1039, 1069, 2088, 2118
Bsc4I	CCNNNNNNNGG	6 cut(s)	576, 1236, 1237, 1283, 1854, 2191
Bse1I	ACTGG	2 cut(s)	1524, 1831
Bse3DI	GCAATG	2 cut(s)	209, 908
Bse8I	GATNNNNATC	1 cut(s)	621
BseBI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BseDI	CCNNGG	5 cut(s)	273, 627, 1234, 1735, 1848
BseGI	GGATG	6 cut(s)	301, 622, 874, 1537, 1723, 1969
BseJI	GATNNNNATC	1 cut(s)	621
BseLI	CCNNNNNNNGG	6 cut(s)	576, 1236, 1237, 1283, 1854, 2191
BseMI	GCAATG	2 cut(s)	209, 908
BseMII	CTCAG	5 cut(s)	651, 672, 1095, 1344, 1950
BseNI	ACTGG	2 cut(s)	1524, 1831
BseRI	GAGGAG	3 cut(s)	419, 747, 1205
BseSI	GKGCMC	2 cut(s)	1494, 1969
BseYI	CCCAGC	2 cut(s)	1322, 2025
BsgI	GTGCAG	2 cut(s)	190, 1041
Bsh1236I	CGCG	1 cut(s)	227
Bsh1285I	CGRYCG	2 cut(s)	187, 1618
BshFI	GGCC	3 cut(s)	568, 1612, 2183
BshNI	GGYRCC	1 cut(s)	1327
BsiEI	CGRYCG	2 cut(s)	187, 1618
BsiHKAI	GWGCWC	6 cut(s)	164, 652, 666, 757, 1276, 1387
BsiHKCI	CYCGRG	1 cut(s)	100
BsiSI	CCGG	5 cut(s)	218, 336, 635, 1614, 2145
BslI	CCNNNNNNNGG	6 cut(s)	576, 1236, 1237, 1283, 1854, 2191
BsmAI	GTCTC	3 cut(s)	151, 976, 2039
BsnI	GGCC	3 cut(s)	568, 1612, 2183
BsoBI	CYCGRG	1 cut(s)	100
Bsp1286I	GDGCHC	8 cut(s)	164, 652, 666, 757, 1276, 1387, 1494, 1969
Bsp1720I	GCTNAGC	1 cut(s)	660
BspANI	GGCC	3 cut(s)	568, 1612, 2183
BspCNI	CTCAG	5 cut(s)	652, 673, 1094, 1345, 1951
BspFNI	CGCG	1 cut(s)	227
BspLI	GGNNCC	6 cut(s)	340, 624, 633, 1329, 1428, 1468
BspQI	GCTCTTC	1 cut(s)	1035
BspT107I	GGYRCC	1 cut(s)	1327
BsrDI	GCAATG	2 cut(s)	209, 908
BsrI	ACTGG	2 cut(s)	1524, 1831
BssECI	CCNNGG	5 cut(s)	273, 627, 1234, 1735, 1848
BssNI	GRCGYC	1 cut(s)	545
BssSI	CACGAG	1 cut(s)	1998
BssT1I	CCWWGG	3 cut(s)	627, 1234, 1848
Bst2BI	CACGAG	1 cut(s)	1998
Bst2UI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
Bst4CI	ACNGT	3 cut(s)	677, 728, 991
Bst6I	CTCTTC	6 cut(s)	458, 825, 1035, 1893, 2095, 2106
BstACI	GRCGYC	1 cut(s)	545
BstAPI	GCANNNNNTGC	3 cut(s)	910, 1766, 1946
BstBAI	YACGTR	1 cut(s)	916
BstC8I	GCNNGC	3 cut(s)	15, 852, 2181
BstDEI	CTNAG	7 cut(s)	660, 681, 1081, 1302, 1353, 1416, 1959
BstDSI	CCRYGG	1 cut(s)	1735
BstEII	GGTNACC	1 cut(s)	2020
BstF5I	GGATG	6 cut(s)	301, 622, 874, 1537, 1723, 1969
BstFNI	CGCG	1 cut(s)	227
BstH2I	RGCGCY	1 cut(s)	700
BstHHI	GCGC	2 cut(s)	216, 699
BstMAI	GTCTC	3 cut(s)	151, 976, 2039
BstMCI	CGRYCG	2 cut(s)	187, 1618
BstNI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BstPI	GGTNACC	1 cut(s)	2020
BstSCI	CCNGG	7 cut(s)	216, 633, 886, 1276, 1607, 1612, 1744
BstSFI	CTRYAG	3 cut(s)	774, 1339, 2172
BstSLI	GKGCMC	2 cut(s)	1494, 1969
BstUI	CGCG	1 cut(s)	227
BstV2I	GAAGAC	1 cut(s)	1508
BstX2I	RGATCY	5 cut(s)	622, 1349, 1466, 1762, 2003
BstXI	CCANNNNNNTGG	1 cut(s)	1931
BstYI	RGATCY	5 cut(s)	622, 1349, 1466, 1762, 2003
BsuRI	GGCC	3 cut(s)	568, 1612, 2183
BtgI	CCRYGG	1 cut(s)	1735
BtgZI	GCGATG	1 cut(s)	138
BtrI	CACGTC	1 cut(s)	195
BtsCI	GGATG	6 cut(s)	301, 622, 874, 1537, 1723, 1969
BtsIMutI	CAGTG	1 cut(s)	765
Cac8I	GCNNGC	3 cut(s)	15, 852, 2181
CaiI	CAGNNNCTG	1 cut(s)	1352
CfoI	GCGC	2 cut(s)	216, 699
Cfr13I	GGNCC	4 cut(s)	567, 631, 1611, 2182
CseI	GACGC	2 cut(s)	534, 1513
Csp6I	GTAC	2 cut(s)	1039, 1204
CviAII	CATG	5 cut(s)	499, 1925, 1937, 2092, 2191
CviQI	GTAC	2 cut(s)	1039, 1204
DdeI	CTNAG	7 cut(s)	660, 681, 1081, 1302, 1353, 1416, 1959
DraI	TTTAAA	1 cut(s)	1150
Eam1104I	CTCTTC	6 cut(s)	458, 825, 1035, 1893, 2095, 2106
EarI	CTCTTC	6 cut(s)	458, 825, 1035, 1893, 2095, 2106
EciI	GGCGGA	1 cut(s)	629
Ecl136II	GAGCTC	3 cut(s)	162, 664, 755
Eco130I	CCWWGG	3 cut(s)	627, 1234, 1848
Eco24I	GRGCYC	3 cut(s)	164, 666, 757
Eco47I	GGWCC	1 cut(s)	631
Eco47III	AGCGCT	1 cut(s)	698
Eco53kI	GAGCTC	3 cut(s)	162, 664, 755
Eco57I	CTGAAG	2 cut(s)	1053, 1917
Eco72I	CACGTG	1 cut(s)	916
Eco88I	CYCGRG	1 cut(s)	100
Eco91I	GGTNACC	1 cut(s)	2020
EcoICRI	GAGCTC	3 cut(s)	162, 664, 755
EcoO109I	RGGNCCY	1 cut(s)	631
EcoO65I	GGTNACC	1 cut(s)	2020
EcoRI	GAATTC	1 cut(s)	1257
EcoRII	CCWGG	4 cut(s)	886, 1276, 1607, 1744
EcoT14I	CCWWGG	3 cut(s)	627, 1234, 1848
EcoT38I	GRGCYC	3 cut(s)	164, 666, 757
ErhI	CCWWGG	3 cut(s)	627, 1234, 1848
FaeI	CATG	5 cut(s)	502, 1928, 1940, 2095, 2194
FalI	AAGNNNNNCTT	1 cut(s)	38
FatI	CATG	5 cut(s)	498, 1924, 1936, 2091, 2190
FauI	CCCGC	2 cut(s)	302, 1238
FblI	GTMKAC	2 cut(s)	255, 723
FokI	GGATG	6 cut(s)	308, 629, 881, 1544, 1730, 1956
FriOI	GRGCYC	3 cut(s)	164, 666, 757
GlaI	GCGC	2 cut(s)	215, 698
GsaI	CCCAGC	2 cut(s)	1326, 2029
GsuI	CTGGAG	1 cut(s)	1335
HaeII	RGCGCY	1 cut(s)	700
HaeIII	GGCC	3 cut(s)	568, 1612, 2183
HapII	CCGG	5 cut(s)	218, 336, 635, 1614, 2145
HgaI	GACGC	2 cut(s)	534, 1513
HhaI	GCGC	2 cut(s)	216, 699
Hin1I	GRCGYC	1 cut(s)	545
Hin1II	CATG	5 cut(s)	502, 1928, 1940, 2095, 2194
Hin6I	GCGC	2 cut(s)	214, 697
HinP1I	GCGC	2 cut(s)	214, 697
HincII	GTYRAC	3 cut(s)	256, 1807, 1824
HindII	GTYRAC	3 cut(s)	256, 1807, 1824
HindIII	AAGCTT	1 cut(s)	15
HpaII	CCGG	5 cut(s)	218, 336, 635, 1614, 2145
HphI	GGTGA	4 cut(s)	413, 649, 1906, 2014
Hpy166II	GTNNAC	6 cut(s)	256, 724, 987, 1807, 1824, 1832
Hpy188I	TCNGA	9 cut(s)	176, 274, 550, 1354, 1476, 1563, 1857, 1897, 1953
Hpy8I	GTNNAC	6 cut(s)	256, 724, 987, 1807, 1824, 1832
Hpy99I	CGWCG	2 cut(s)	199, 550
HpyAV	CCTTC	6 cut(s)	358, 529, 822, 834, 1481, 2043
HpyCH4III	ACNGT	3 cut(s)	677, 728, 991
HpyCH4IV	ACGT	4 cut(s)	194, 717, 915, 1653
HpyF3I	CTNAG	7 cut(s)	660, 681, 1081, 1302, 1353, 1416, 1959
HpySE526I	ACGT	4 cut(s)	194, 717, 915, 1653
Hsp92I	GRCGYC	1 cut(s)	545
Hsp92II	CATG	5 cut(s)	502, 1928, 1940, 2095, 2194
HspAI	GCGC	2 cut(s)	214, 697
LguI	GCTCTTC	1 cut(s)	1035
LmnI	GCTCC	7 cut(s)	338, 367, 1047, 1271, 1432, 2034, 2147
LweI	GCATC	8 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708
MaeII	ACGT	4 cut(s)	194, 717, 915, 1653
MaeIII	GTNAC	3 cut(s)	763, 2020, 2137
MfeI	CAATTG	1 cut(s)	1941
MflI	RGATCY	5 cut(s)	622, 1349, 1466, 1762, 2003
MhlI	GDGCHC	8 cut(s)	164, 652, 666, 757, 1276, 1387, 1494, 1969
MlyI	GAGTC	2 cut(s)	692, 1910
MmeI	TCCRAC	6 cut(s)	71, 528, 573, 979, 1354, 1444
MroXI	GAANNNNTTC	3 cut(s)	786, 811, 1122
MseI	TTAA	6 cut(s)	30, 303, 1140, 1149, 1752, 1779
MslI	CAYNNNNRTG	1 cut(s)	1929
MspA1I	CMGCKG	2 cut(s)	183, 1025
MspI	CCGG	5 cut(s)	218, 336, 635, 1614, 2145
MspR9I	CCNGG	7 cut(s)	218, 635, 888, 1278, 1609, 1614, 1746
MunI	CAATTG	1 cut(s)	1941
MvaI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
MvnI	CGCG	1 cut(s)	227
NciI	CCSGG	3 cut(s)	218, 635, 1614
NlaIII	CATG	5 cut(s)	502, 1928, 1940, 2095, 2194
NlaIV	GGNNCC	6 cut(s)	340, 624, 633, 1329, 1428, 1468
NmeAIII	GCCGAG	2 cut(s)	183, 1366
NmuCI	GTSAC	3 cut(s)	763, 2020, 2137
PciSI	GCTCTTC	1 cut(s)	1035
PcsI	WCGNNNNNNNCGW	1 cut(s)	155
PdmI	GAANNNNTTC	3 cut(s)	786, 811, 1122
PfeI	GAWTC	8 cut(s)	177, 199, 242, 269, 284, 800, 1123, 1620
PflMI	CCANNNNNTGG	1 cut(s)	2191
PleI	GAGTC	2 cut(s)	691, 1909
PmaCI	CACGTG	1 cut(s)	916
PmlI	CACGTG	1 cut(s)	916
PpsI	GAGTC	2 cut(s)	691, 1909
Ppu21I	YACGTR	1 cut(s)	916
PpuMI	RGGWCCY	1 cut(s)	631
Psp124BI	GAGCTC	3 cut(s)	164, 666, 757
Psp5II	RGGWCCY	1 cut(s)	631
Psp6I	CCWGG	4 cut(s)	886, 1276, 1607, 1744
PspCI	CACGTG	1 cut(s)	916
PspEI	GGTNACC	1 cut(s)	2020
PspFI	CCCAGC	2 cut(s)	1322, 2025
PspGI	CCWGG	4 cut(s)	886, 1276, 1607, 1744
PspN4I	GGNNCC	6 cut(s)	340, 624, 633, 1329, 1428, 1468
PspPI	GGNCC	4 cut(s)	567, 631, 1611, 2182
PspPPI	RGGWCCY	1 cut(s)	631
PstNI	CAGNNNCTG	1 cut(s)	1352
PsuI	RGATCY	5 cut(s)	622, 1349, 1466, 1762, 2003
PvuII	CAGCTG	1 cut(s)	1025
RsaI	GTAC	2 cut(s)	1040, 1205
RsaNI	GTAC	2 cut(s)	1039, 1204
RseI	CAYNNNNRTG	1 cut(s)	1929
SacI	GAGCTC	3 cut(s)	164, 666, 757
SalI	GTCGAC	1 cut(s)	254
SapI	GCTCTTC	1 cut(s)	1035
SaqAI	TTAA	6 cut(s)	30, 303, 1140, 1149, 1752, 1779
Sau96I	GGNCC	4 cut(s)	567, 631, 1611, 2182
SchI	GAGTC	2 cut(s)	692, 1910
ScrFI	CCNGG	7 cut(s)	218, 635, 888, 1278, 1609, 1614, 1746
SduI	GDGCHC	8 cut(s)	164, 652, 666, 757, 1276, 1387, 1494, 1969
SfaNI	GCATC	8 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708
SfcI	CTRYAG	3 cut(s)	774, 1339, 2172
SinI	GGWCC	1 cut(s)	631
SmiMI	CAYNNNNRTG	1 cut(s)	1929
SmlI	CTYRAG	4 cut(s)	163, 356, 960, 1187
SmoI	CTYRAG	4 cut(s)	163, 356, 960, 1187
SspI	AATATT	1 cut(s)	1783
SstI	GAGCTC	3 cut(s)	164, 666, 757
StyD4I	CCNGG	7 cut(s)	216, 633, 886, 1276, 1607, 1612, 1744
StyI	CCWWGG	3 cut(s)	627, 1234, 1848
TaaI	ACNGT	3 cut(s)	677, 728, 991
TaiI	ACGT	4 cut(s)	197, 720, 918, 1656
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	1 cut(s)	580
TfiI	GAWTC	8 cut(s)	177, 199, 242, 269, 284, 800, 1123, 1620
Tru1I	TTAA	6 cut(s)	30, 303, 1140, 1149, 1752, 1779
Tru9I	TTAA	6 cut(s)	30, 303, 1140, 1149, 1752, 1779
TscAI	CASTG	1 cut(s)	772
TseFI	GTSAC	3 cut(s)	763, 2020, 2137
Tsp45I	GTSAC	3 cut(s)	763, 2020, 2137
TspDTI	ATGAA	8 cut(s)	312, 487, 813, 885, 1432, 1464, 1879, 1941
TspGWI	ACGGA	1 cut(s)	1891
TspRI	CASTG	1 cut(s)	772
Van91I	CCANNNNNTGG	1 cut(s)	2191
VpaK11BI	GGWCC	1 cut(s)	631
XapI	RAATTY	5 cut(s)	169, 229, 1223, 1257, 1841
XmiI	GTMKAC	2 cut(s)	255, 723
XmnI	GAANNNNTTC	3 cut(s)	786, 811, 1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.