Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

26633072 .. 26642078

Gene Structure 9007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G022570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGGGTTGTGGGCAACTGCAAGGAGAGGGTTTGAGAAGGCATTGGCGTCGGAATGGTTCAGTTGGTGGCCCTTTTGGCGGCAGGAGAAGCGGTTGGAGAGGCTGATTGCGGAGGCGGATGCGGATCCCAAGGACCCGGTGAAGCAGAGTGCTCTGTTTGCTGAGCTCAATAAGCACAGTCCTGAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCACGTTGTAGACAGTAGAGGAGTTGCAGAGTATCTTCGAGCTCTTGTGGTCACTGATGCTATAGCTGAATATCTTCCAAACGATGAATCTGGAAAGCCTTCTACTCTTCCTTCGCTGTTGCAAGAATTGAAACAGCGTGCATCAGGCAACTTGGATGAACCCTTTGTCAAACCTGGCATAAATGAGAAGCAACCATTGCATGTGCTGATGGTTGAACCGAAAGTATCAAACAAATCTCGTTTTACTCAAGAGCTTGTCTCAACCATCTTGTTCACAGTTGCGGTTGGATTAGTGTGGTTTATGGGTGCAGCTGCTCTTCAAAAGTACATAGGGAGCTTGGGTGGAATAGGTGCTTCAGGTGTTGGCTCAGGTTCTTCCTATACCCCAAAGGAGTTGAATAAAGAAGTGATTCCAGAAAAGAATGTTAAAACCTTTAAAGATGTCAAAGGCTGTGATGATGCAAAGCAAGAGCTTGAGGAGGTAGTGGAGTACCTCAAAAACCCAACTAAATTTACCCGCCTTGGGGGCAAGTTGCCAAAGGGAATTCTTTTGACAGGAGCACCAGGAACAGGAAAGACATTACTTGCTAAGGCTATTGCTGGAGAAGCTGGGGTGCCATTTTTCTATAGAGCAGGATCTGAGTTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCGTTATTTCAAGCAGCTAAGAAAAAGGCTCCTTGCATCATTTTCATTGATGAAATAGATGCTGTTGGATCCACTCGGAAACAATGGGAAGGGCACACAAAGAAGACGCTGCATCAATTACTGGTTGAAATGGATGGTTTCGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACCAACTTGCCTGATATTCTTGATCCAGCATTGACCAGGCCCGGTCGATTCGACAGGCATATTGTTGTTCCAAATCCAGACGTTCGAGGTCGTCAAGAGATATTGGAACTTTATCTTCAAGATAAGCCATTAGCTGATGATGTGGATGCTAAAGCAATAGCCCGTGGCACACCAGGATTTAATGGGGCAGATCTTGCGAACTTGGTTAATATTGCTGCTATAAAAGCTGCTGTTGACGGGGCTGACAAGTTGACTGGTTCACAATTAGAATTTGCCAAGGACCGGATAGTAATGGGAACAGAACGGAAAACAATGTTCATTTCTGAAGAGTCAAAAAAGCTCACCGCATACCATGAAAGTGGTCATGCAATTGTTGCTCTGAATACTGAGGGGGCACATCCAATTCACAAGGCTACAATCCTACCTCGTGGATCTGCTTTGGGAATGGTCACCCAGCTCCCTTCAAATGACGAGACATCAATTAGCAAGAAGCAGCTATTAGCTCGTCTTGATGTCTGCATGGGAGGAAGAGTAGCAGAAGAGATCATCTTTGGTCAGGATTTTGTCACAACCGGAGCAAGTAGTGATCTAAACACAGCTACAGAGCTGGCCCACTATATGGTATCAAGCTGTGGTATGAGTGACACAATTGGGCCAGTTCATGTCAAAGAGCGACCAAGTTCTGAAATGCAATCTCGTATTGATGCAGAAGTTGTGAAAATGTTAAGGGAAGCATATGATCGTGTAAAGGTCCTCCTAAAGAAGCATGAGAAGGCGTTACATGCATTGGCAAATTCACTTTTGGAGTATGAGACGCTTAATTCAGAAGAAATTAAGCGTATTATGATGCCATATCAGGAAGGGCGGCTGCCTGAGCTACAAGAAGAGCAACAAGAAGAAGGGGATCTTGTATTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

664

Amino Acids

73.19

Weight (kDa)

5.98

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	254 - 382	5e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	405 - 448	3.6e-09	AAA+ lid domain
Peptidase_M41	PF01434	464 - 639	1e-59	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	829
AccB7I	CCANNNNNTGG	1 cut(s)	1693
AccI	GTMKAC	1 cut(s)	225
AciI	CCGC	9 cut(s)	79, 91, 110, 116, 122, 497, 733, 1419, 1939
AclWI	GGATC	9 cut(s)	119, 132, 222, 859, 963, 976, 1091, 1513, 1986
AcsI	RAATTY	4 cut(s)	725, 759, 1343, 1867
AcuI	CTGAAG	2 cut(s)	555, 1419
AcyI	GRCGYC	1 cut(s)	47
AfaI	GTAC	2 cut(s)	542, 707
AfeI	AGCGCT	1 cut(s)	200
AfiI	CCNNNNNNNGG	6 cut(s)	78, 738, 739, 785, 1356, 1693
AjnI	CCWGG	4 cut(s)	388, 778, 1109, 1246
AjuI	GAANNNNNNNTTGG	2 cut(s)	858, 890
Alw21I	GWGCWC	5 cut(s)	154, 168, 259, 778, 889
Alw26I	GTCTC	3 cut(s)	478, 1541, 1880
AlwI	GGATC	9 cut(s)	119, 132, 222, 859, 963, 976, 1091, 1513, 1986
AlwNI	CAGNNNCTG	1 cut(s)	854
Aor51HI	AGCGCT	1 cut(s)	200
AoxI	GGCC	4 cut(s)	68, 1112, 1683, 1727
ApeKI	GCWGC	9 cut(s)	524, 527, 914, 1009, 1070, 1289, 1301, 1567, 1942
ApoI	RAATTY	4 cut(s)	725, 759, 1343, 1867
Asp700I	GAANNNNTTC	3 cut(s)	288, 313, 624
AspLEI	GCGC	1 cut(s)	201
AspS9I	GGNCC	7 cut(s)	69, 133, 1113, 1354, 1684, 1727, 1825
AsuC2I	CCSGG	2 cut(s)	137, 1116
AsuHPI	GGTGA	3 cut(s)	151, 1408, 1516
AvaII	GGWCC	3 cut(s)	133, 1354, 1825
BaeGI	GKGCMC	2 cut(s)	996, 1471
BamHI	GGATCC	2 cut(s)	124, 968
BanI	GGYRCC	1 cut(s)	829
BanII	GRGCYC	2 cut(s)	168, 259
BauI	CACGAG	1 cut(s)	1500
BbsI	GAAGAC	1 cut(s)	1010
Bbv12I	GWGCWC	5 cut(s)	154, 168, 259, 778, 889
BbvI	GCAGC	9 cut(s)	514, 536, 926, 996, 1057, 1276, 1288, 1579, 1929
BccI	CCATC	4 cut(s)	418, 488, 1028, 1060
BcgI	CGANNNNNNTGC	2 cut(s)	30, 64
BciT130I	CCWGG	4 cut(s)	390, 780, 1111, 1248
BcnI	CCSGG	2 cut(s)	137, 1116
BcoDI	GTCTC	3 cut(s)	478, 1541, 1880
BfmI	CTRYAG	3 cut(s)	276, 841, 1674
BfoI	RGCGCY	1 cut(s)	202
BglI	GCCNNNNNGGC	2 cut(s)	76, 741
BglII	AGATCT	1 cut(s)	1264
BlpI	GCTNAGC	1 cut(s)	162
Bme1390I	CCNGG	6 cut(s)	137, 390, 780, 1111, 1116, 1248
Bme18I	GGWCC	3 cut(s)	133, 1354, 1825
BmgT120I	GGNCC	7 cut(s)	69, 133, 1113, 1354, 1684, 1727, 1825
BmiI	GGNNCC	5 cut(s)	126, 135, 831, 930, 970
BmrFI	CCNGG	6 cut(s)	137, 390, 780, 1111, 1116, 1248
BpiI	GAAGAC	1 cut(s)	1010
BplI	GAGNNNNNCTC	2 cut(s)	458, 490
BpmI	CTGGAG	1 cut(s)	837
Bpu10I	CCTNAGC	3 cut(s)	583, 804, 1947
Bpu1102I	GCTNAGC	1 cut(s)	162
BpuEI	CTTGAG	2 cut(s)	447, 710
BpuMI	CCSGG	2 cut(s)	137, 1116
BsaBI	GATNNNNATC	1 cut(s)	123
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	4 cut(s)	129, 736, 1237, 1350
BsaWI	WCCGGW	2 cut(s)	1356, 1646
BsaXI	ACNNNNNCTCC	6 cut(s)	77, 107, 541, 571, 1590, 1620
Bsc4I	CCNNNNNNNGG	6 cut(s)	78, 738, 739, 785, 1356, 1693
Bse1I	ACTGG	3 cut(s)	1026, 1333, 1730
Bse3DI	GCAATG	1 cut(s)	410
Bse8I	GATNNNNATC	1 cut(s)	123
BseBI	CCWGG	4 cut(s)	390, 780, 1111, 1248
BseDI	CCNNGG	4 cut(s)	129, 736, 1237, 1350
BseGI	GGATG	5 cut(s)	124, 376, 1039, 1225, 1471
BseJI	GATNNNNATC	1 cut(s)	123
BseLI	CCNNNNNNNGG	6 cut(s)	78, 738, 739, 785, 1356, 1693
BseMI	GCAATG	1 cut(s)	410
BseMII	CTCAG	6 cut(s)	153, 174, 597, 846, 1452, 1938
BseNI	ACTGG	3 cut(s)	1026, 1333, 1730
BseRI	GAGGAG	2 cut(s)	249, 707
BseSI	GKGCMC	2 cut(s)	996, 1471
BseXI	GCAGC	9 cut(s)	514, 536, 926, 996, 1057, 1276, 1288, 1579, 1929
BseYI	CCCAGC	2 cut(s)	824, 1527
BsgI	GTGCAG	1 cut(s)	543
Bsh1285I	CGRYCG	1 cut(s)	1120
BshFI	GGCC	4 cut(s)	70, 1114, 1685, 1729
BshNI	GGYRCC	1 cut(s)	829
BsiEI	CGRYCG	1 cut(s)	1120
BsiHKAI	GWGCWC	5 cut(s)	154, 168, 259, 778, 889
BsiSI	CCGG	4 cut(s)	137, 1116, 1357, 1647
BslI	CCNNNNNNNGG	6 cut(s)	78, 738, 739, 785, 1356, 1693
BsmAI	GTCTC	3 cut(s)	478, 1541, 1880
BsmBI	CGTCTC	1 cut(s)	1880
BsnI	GGCC	4 cut(s)	70, 1114, 1685, 1729
Bsp1286I	GDGCHC	7 cut(s)	154, 168, 259, 778, 889, 996, 1471
Bsp1720I	GCTNAGC	1 cut(s)	162
BspACI	CCGC	9 cut(s)	79, 91, 110, 116, 122, 497, 733, 1419, 1939
BspANI	GGCC	4 cut(s)	70, 1114, 1685, 1729
BspCNI	CTCAG	6 cut(s)	154, 175, 596, 847, 1453, 1939
BspLI	GGNNCC	5 cut(s)	126, 135, 831, 930, 970
BspPI	GGATC	9 cut(s)	119, 132, 222, 859, 963, 976, 1091, 1513, 1986
BspQI	GCTCTTC	2 cut(s)	537, 1953
BspT107I	GGYRCC	1 cut(s)	829
BsrDI	GCAATG	1 cut(s)	410
BsrI	ACTGG	3 cut(s)	1026, 1333, 1730
BssECI	CCNNGG	4 cut(s)	129, 736, 1237, 1350
BssNI	GRCGYC	1 cut(s)	47
BssSI	CACGAG	1 cut(s)	1500
BssT1I	CCWWGG	3 cut(s)	129, 736, 1350
Bst2BI	CACGAG	1 cut(s)	1500
Bst2UI	CCWGG	4 cut(s)	390, 780, 1111, 1248
Bst4CI	ACNGT	3 cut(s)	179, 230, 493
Bst6I	CTCTTC	6 cut(s)	327, 537, 1395, 1597, 1608, 1953
BstACI	GRCGYC	1 cut(s)	47
BstAPI	GCANNNNNTGC	3 cut(s)	412, 1268, 1448
BstC8I	GCNNGC	2 cut(s)	354, 1683
BstDEI	CTNAG	8 cut(s)	162, 183, 583, 804, 855, 918, 1461, 1947
BstDSI	CCRYGG	1 cut(s)	1237
BstEII	GGTNACC	1 cut(s)	1522
BstF5I	GGATG	5 cut(s)	124, 376, 1039, 1225, 1471
BstH2I	RGCGCY	1 cut(s)	202
BstHHI	GCGC	1 cut(s)	201
BstMAI	GTCTC	3 cut(s)	478, 1541, 1880
BstMCI	CGRYCG	1 cut(s)	1120
BstNI	CCWGG	4 cut(s)	390, 780, 1111, 1248
BstNSI	RCATGY	2 cut(s)	419, 1859
BstPI	GGTNACC	1 cut(s)	1522
BstSCI	CCNGG	6 cut(s)	135, 388, 778, 1109, 1114, 1246
BstSFI	CTRYAG	3 cut(s)	276, 841, 1674
BstSLI	GKGCMC	2 cut(s)	996, 1471
BstV1I	GCAGC	9 cut(s)	514, 536, 926, 996, 1057, 1276, 1288, 1579, 1929
BstV2I	GAAGAC	1 cut(s)	1010
BstX2I	RGATCY	6 cut(s)	124, 851, 968, 1264, 1505, 1978
BstXI	CCANNNNNNTGG	1 cut(s)	1433
BstYI	RGATCY	6 cut(s)	124, 851, 968, 1264, 1505, 1978
BsuRI	GGCC	4 cut(s)	70, 1114, 1685, 1729
BtgI	CCRYGG	1 cut(s)	1237
BtsCI	GGATG	5 cut(s)	124, 376, 1039, 1225, 1471
BtsIMutI	CAGTG	1 cut(s)	267
Cac8I	GCNNGC	2 cut(s)	354, 1683
CaiI	CAGNNNCTG	1 cut(s)	854
CfoI	GCGC	1 cut(s)	201
Cfr13I	GGNCC	7 cut(s)	69, 133, 1113, 1354, 1684, 1727, 1825
CseI	GACGC	3 cut(s)	36, 1015, 1897
Csp6I	GTAC	2 cut(s)	541, 706
CviAII	CATG	7 cut(s)	416, 1427, 1439, 1594, 1736, 1841, 1856
CviQI	GTAC	2 cut(s)	541, 706
DdeI	CTNAG	8 cut(s)	162, 183, 583, 804, 855, 918, 1461, 1947
DraI	TTTAAA	1 cut(s)	652
Eam1104I	CTCTTC	6 cut(s)	327, 537, 1395, 1597, 1608, 1953
EarI	CTCTTC	6 cut(s)	327, 537, 1395, 1597, 1608, 1953
EciI	GGCGGA	1 cut(s)	131
Ecl136II	GAGCTC	2 cut(s)	166, 257
Eco130I	CCWWGG	3 cut(s)	129, 736, 1350
Eco24I	GRGCYC	2 cut(s)	168, 259
Eco47I	GGWCC	3 cut(s)	133, 1354, 1825
Eco47III	AGCGCT	1 cut(s)	200
Eco53kI	GAGCTC	2 cut(s)	166, 257
Eco57I	CTGAAG	2 cut(s)	555, 1419
Eco91I	GGTNACC	1 cut(s)	1522
EcoICRI	GAGCTC	2 cut(s)	166, 257
EcoO109I	RGGNCCY	2 cut(s)	133, 1825
EcoO65I	GGTNACC	1 cut(s)	1522
EcoRI	GAATTC	1 cut(s)	759
EcoRII	CCWGG	4 cut(s)	388, 778, 1109, 1246
EcoT14I	CCWWGG	3 cut(s)	129, 736, 1350
EcoT22I	ATGCAT	1 cut(s)	1861
EcoT38I	GRGCYC	2 cut(s)	168, 259
ErhI	CCWWGG	3 cut(s)	129, 736, 1350
Esp3I	CGTCTC	1 cut(s)	1880
FaeI	CATG	7 cut(s)	419, 1430, 1442, 1597, 1739, 1844, 1859
FalI	AAGNNNNNCTT	1 cut(s)	1965
FatI	CATG	7 cut(s)	415, 1426, 1438, 1593, 1735, 1840, 1855
FauI	CCCGC	1 cut(s)	740
FauNDI	CATATG	1 cut(s)	1810
FblI	GTMKAC	1 cut(s)	225
FokI	GGATG	5 cut(s)	131, 383, 1046, 1232, 1458
FriOI	GRGCYC	2 cut(s)	168, 259
GlaI	GCGC	1 cut(s)	200
GsaI	CCCAGC	2 cut(s)	828, 1531
GsuI	CTGGAG	1 cut(s)	837
HaeII	RGCGCY	1 cut(s)	202
HaeIII	GGCC	4 cut(s)	70, 1114, 1685, 1729
HapII	CCGG	4 cut(s)	137, 1116, 1357, 1647
HgaI	GACGC	3 cut(s)	36, 1015, 1897
HhaI	GCGC	1 cut(s)	201
Hin1I	GRCGYC	1 cut(s)	47
Hin1II	CATG	7 cut(s)	419, 1430, 1442, 1597, 1739, 1844, 1859
Hin6I	GCGC	1 cut(s)	199
HinP1I	GCGC	1 cut(s)	199
HincII	GTYRAC	2 cut(s)	1309, 1326
HindII	GTYRAC	2 cut(s)	1309, 1326
HinfI	GANTC	5 cut(s)	185, 302, 625, 1122, 1403
HpaII	CCGG	4 cut(s)	137, 1116, 1357, 1647
HphI	GGTGA	3 cut(s)	151, 1408, 1516
Hpy166II	GTNNAC	5 cut(s)	226, 489, 1309, 1326, 1334
Hpy188I	TCNGA	8 cut(s)	52, 856, 978, 1065, 1399, 1455, 1759, 1900
Hpy8I	GTNNAC	5 cut(s)	226, 489, 1309, 1326, 1334
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	8 cut(s)	31, 324, 336, 983, 1545, 1840, 1928, 1967
HpyCH4III	ACNGT	3 cut(s)	179, 230, 493
HpyCH4IV	ACGT	2 cut(s)	219, 1155
HpyF3I	CTNAG	8 cut(s)	162, 183, 583, 804, 855, 918, 1461, 1947
HpySE526I	ACGT	2 cut(s)	219, 1155
Hsp92I	GRCGYC	1 cut(s)	47
Hsp92II	CATG	7 cut(s)	419, 1430, 1442, 1597, 1739, 1844, 1859
HspAI	GCGC	1 cut(s)	199
LguI	GCTCTTC	2 cut(s)	537, 1953
LmnI	GCTCC	5 cut(s)	549, 773, 934, 1536, 1649
Lsp1109I	GCAGC	9 cut(s)	514, 536, 926, 996, 1057, 1276, 1288, 1579, 1929
MaeII	ACGT	2 cut(s)	219, 1155
MaeIII	GTNAC	5 cut(s)	265, 1522, 1639, 1715, 1851
MfeI	CAATTG	2 cut(s)	1443, 1722
MflI	RGATCY	6 cut(s)	124, 851, 968, 1264, 1505, 1978
MhlI	GDGCHC	7 cut(s)	154, 168, 259, 778, 889, 996, 1471
MlyI	GAGTC	2 cut(s)	194, 1412
MmeI	TCCRAC	5 cut(s)	30, 75, 481, 856, 946
Mph1103I	ATGCAT	1 cut(s)	1861
MroXI	GAANNNNTTC	3 cut(s)	288, 313, 624
MseI	TTAA	7 cut(s)	642, 651, 1254, 1281, 1799, 1893, 1908
MslI	CAYNNNNRTG	1 cut(s)	1431
MspA1I	CMGCKG	1 cut(s)	527
MspI	CCGG	4 cut(s)	137, 1116, 1357, 1647
MspR9I	CCNGG	6 cut(s)	137, 390, 780, 1111, 1116, 1248
MunI	CAATTG	2 cut(s)	1443, 1722
MvaI	CCWGG	4 cut(s)	390, 780, 1111, 1248
NciI	CCSGG	2 cut(s)	137, 1116
NdeI	CATATG	1 cut(s)	1810
NlaIII	CATG	7 cut(s)	419, 1430, 1442, 1597, 1739, 1844, 1859
NlaIV	GGNNCC	5 cut(s)	126, 135, 831, 930, 970
NmeAIII	GCCGAG	1 cut(s)	868
NmuCI	GTSAC	4 cut(s)	265, 1522, 1639, 1715
NsiI	ATGCAT	1 cut(s)	1861
NspI	RCATGY	2 cut(s)	419, 1859
PciSI	GCTCTTC	2 cut(s)	537, 1953
PdmI	GAANNNNTTC	3 cut(s)	288, 313, 624
PfeI	GAWTC	3 cut(s)	302, 625, 1122
PflMI	CCANNNNNTGG	1 cut(s)	1693
PleI	GAGTC	2 cut(s)	193, 1411
PpsI	GAGTC	2 cut(s)	193, 1411
PpuMI	RGGWCCY	2 cut(s)	133, 1825
Psp124BI	GAGCTC	2 cut(s)	168, 259
Psp5II	RGGWCCY	2 cut(s)	133, 1825
Psp6I	CCWGG	4 cut(s)	388, 778, 1109, 1246
PspEI	GGTNACC	1 cut(s)	1522
PspFI	CCCAGC	2 cut(s)	824, 1527
PspGI	CCWGG	4 cut(s)	388, 778, 1109, 1246
PspN4I	GGNNCC	5 cut(s)	126, 135, 831, 930, 970
PspPI	GGNCC	7 cut(s)	69, 133, 1113, 1354, 1684, 1727, 1825
PspPPI	RGGWCCY	2 cut(s)	133, 1825
PstNI	CAGNNNCTG	1 cut(s)	854
PsuI	RGATCY	6 cut(s)	124, 851, 968, 1264, 1505, 1978
PvuII	CAGCTG	1 cut(s)	527
RsaI	GTAC	2 cut(s)	542, 707
RsaNI	GTAC	2 cut(s)	541, 706
RseI	CAYNNNNRTG	1 cut(s)	1431
SacI	GAGCTC	2 cut(s)	168, 259
SapI	GCTCTTC	2 cut(s)	537, 1953
SaqAI	TTAA	7 cut(s)	642, 651, 1254, 1281, 1799, 1893, 1908
Sau96I	GGNCC	7 cut(s)	69, 133, 1113, 1354, 1684, 1727, 1825
SchI	GAGTC	2 cut(s)	194, 1412
ScrFI	CCNGG	6 cut(s)	137, 390, 780, 1111, 1116, 1248
SduI	GDGCHC	7 cut(s)	154, 168, 259, 778, 889, 996, 1471
SfcI	CTRYAG	3 cut(s)	276, 841, 1674
SinI	GGWCC	3 cut(s)	133, 1354, 1825
SmiMI	CAYNNNNRTG	1 cut(s)	1431
SmlI	CTYRAG	2 cut(s)	462, 689
SmoI	CTYRAG	2 cut(s)	462, 689
SsiI	CCGC	9 cut(s)	79, 91, 110, 116, 122, 497, 733, 1419, 1939
SspI	AATATT	1 cut(s)	1285
SstI	GAGCTC	2 cut(s)	168, 259
StyD4I	CCNGG	6 cut(s)	135, 388, 778, 1109, 1114, 1246
StyI	CCWWGG	3 cut(s)	129, 736, 1350
TaaI	ACNGT	3 cut(s)	179, 230, 493
TaiI	ACGT	2 cut(s)	222, 1158
TaqI	TCGA	5 cut(s)	253, 1041, 1120, 1125, 1159
TatI	WGTACW	1 cut(s)	540
TauI	GCSGC	2 cut(s)	82, 1942
TfiI	GAWTC	3 cut(s)	302, 625, 1122
Tru1I	TTAA	7 cut(s)	642, 651, 1254, 1281, 1799, 1893, 1908
Tru9I	TTAA	7 cut(s)	642, 651, 1254, 1281, 1799, 1893, 1908
TscAI	CASTG	1 cut(s)	274
TseFI	GTSAC	4 cut(s)	265, 1522, 1639, 1715
TseI	GCWGC	9 cut(s)	524, 527, 914, 1009, 1070, 1289, 1301, 1567, 1942
Tsp45I	GTSAC	4 cut(s)	265, 1522, 1639, 1715
TspDTI	ATGAA	7 cut(s)	315, 387, 934, 966, 1381, 1443, 1724
TspGWI	ACGGA	1 cut(s)	1393
TspRI	CASTG	1 cut(s)	274
Van91I	CCANNNNNTGG	1 cut(s)	1693
VpaK11BI	GGWCC	3 cut(s)	133, 1354, 1825
XapI	RAATTY	4 cut(s)	725, 759, 1343, 1867
XceI	RCATGY	2 cut(s)	419, 1859
XmiI	GTMKAC	1 cut(s)	225
XmnI	GAANNNNTTC	3 cut(s)	288, 313, 624
Zsp2I	ATGCAT	1 cut(s)	1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.