Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013167.1

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

27806 .. 38140

Gene Structure 10335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013167.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

atgactactctgcaagcttcgcttctccttaacctcccactcactccaactctttcttcttcttcttcttcactcaaacgctttcactgctctcgctcgggttgttatagttgcagccctgtttttcttcccaatatcaatgtctgttcatcgccgagctcaagaaatttcagattcagcggtcgaaacacgtcgattccctgcacattgcgcccggagaacgcgaatttggatcaaggatcgaactttgtcgacacccgtttggattccgaggggaaagaatcgagcttgggtgaaattaacggcggggatttgagtaatagctcggttgccggagccgaaaggcccgaaagtgagaaacttgaggcgaaggagcagtctggggaggtgggtttggagaatgggggtgagaagagtgagggagtggtggtggagagcgagggaaagagtgggggtttggttgagaagaagagtgggaatgggttgccattggtggtgttcttcatggggttgtgggcaactgcaaggagagggtttgagaaggcattggcgtcggaatggttcagttggtggcccttttggcggcaggagaagcggttggagaggctgattgcggaggcggatgcggatcccaaggacccggtgaagcagagtgctctgtttgctgagctcaataagcacagtcctgagtctgtcatcaagcgctttgaacaaagggatcacgttgtagacagtagaggagttgcagagtatcttcgagctcttgtggtcactgatgctatagctgaatatcttccaaacgatgaatctggaaagccttctactcttccttcgctgttgcaagaattgaaacagcgtgcatcaggcaacttggatgaaccctttgtcaaacctggcataaatgagaagcaaccattgcatgtgctgatggttgaaccgaaagtatcaaacaaatctcgttttactcaagagcttgtctcaaccatcttgttcacagttgcggttggattagtgtggtttatgggtgcagctgctcttcaaaagtacatagggagcttgggtggaataggtgcttcaggtgttggctcaggttcttcctataccccaaaggagttgaataaagaagtgattccagaaaagaatgttaaaacctttaaagatgtcaaaggctgtgatgatgcaaagcaagagcttgaggaggtagtggagtacctcaaaaacccaactaaatttacccgccttgggggcaagttgccaaagggaattcttttgacaggagcaccaggaacaggaaagacattacttgctaaggctattgctggagaagctggggtgccatttttctatagagcaggatctgagtttgaagaaatgtttgttggagttggtgctcggcgtgtaagatcgttatttcaagcagctaagaaaaaggctccttgcatcattttcattgatgaaatagatgctgttggatccactcggaaacaatgggaagggcacacaaagaagacgctgcatcaattactggttgaaatggatggtttcgagcagaatgagggaataattctgatggctgcaaccaacttgcctgatattcttgatccagcattgaccaggcccggtcgattcgacaggcatattgttgttccaaatccagacgttcgaggtcgtcaagagatattggaactttatcttcaagataagccattagctgatgatgtggatgctaaagcaatagcccgtggcacaccaggatttaatggggcagatcttgcgaacttggttaatattgctgctataaaagctgctgttgacggggctgacaagttgactggttcacaattagaatttgccaaggaccggatagtaatgggaacagaacggaaaacaatgttcatttctgaagagtcaaaaaagctcaccgcataccatgaaagtggtcatgcaattgttgctctgaatactgagggggcacatccaattcacaaggctacaatcctacctcgtggatctgctttgggaatggtcacccagctcccttcaaatgacgagacatcaattagcaagaagcagctattagctcgtcttgatgtctgcatgggaggaagagtagcagaagagatcatctttggtcaggattttgtcacaaccggagcaagtagtgatctaaacacagctacagagctggcccactatatggtatcaagctgtggtatgagtgacacaattgggccagttcatgtcaaagagcgaccaagttctgaaatgcaatctcgtattgatgcagaagttgtgaaaatgttaagggaagcatatgatcgtgtaaaggtcctcctaaagaagcatgagaaggcgttacatgcattggcaaattcacttttggagtatgagacgcttaattcagaagaaattaagcgtattatgctgccatatcaggaagggcggctgcctgagctacaagaagagcaacaagaagaaggggatcttgtattgctcaccgcataccatgaaagtggtcatgcaattgttgctctgaatactgagggggcacatccaattcacaaggctacaatcctacctcgtggatctgctttgggaatggtcacccagctcccttcaaatgacgagacatcaattagcaagaagcagctattagctcgtcttgatgtctgcatgggaggaagagtagcagaagagatcatctttggtcaggattttgtcacaaccggagcaagtagtgatctaaacacagctacagagctggcccactatatggtatcaagctgtggtatgagtgacacaattgggccagttcatgtcaaagagcgaccaagttctgaaatgcaatctcgtattgatgcagaagttgtgaaaatgttaagggaagcatatgatcgtgtaaaggtcctcctaaagaagcatgagaaggcgttacatgcattggcaaattcacttttggagtatgagacgcttaattcagaagaaattaagcgtattatgctgccatatcaggaagggcggctgcctgagctacaagaagagcaacaagaagaaggggatcttgtattggtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

1024

Amino Acids

112.05

Weight (kDa)

5.63

Isoelectric Point (pI)

48.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1333
AccB7I	CCANNNNNTGG	2 cut(s)	2197, 2773
AccI	GTMKAC	2 cut(s)	252, 729
AccII	CGCG	1 cut(s)	224
AcsI	RAATTY	7 cut(s)	166, 226, 1229, 1263, 1847, 2371, 2947
AcuI	CTGAAG	2 cut(s)	1059, 1923
AcyI	GRCGYC	1 cut(s)	551
AfaI	GTAC	2 cut(s)	1046, 1211
AfeI	AGCGCT	1 cut(s)	704
AfiI	CCNNNNNNNGG	7 cut(s)	582, 1242, 1243, 1289, 1860, 2197, 2773
AflIII	ACRYGT	1 cut(s)	189
AjiI	CACGTC	1 cut(s)	192
AjnI	CCWGG	4 cut(s)	892, 1282, 1613, 1750
AjuI	GAANNNNNNNTTGG	6 cut(s)	40, 72, 212, 244, 1362, 1394
Alw21I	GWGCWC	6 cut(s)	161, 658, 672, 763, 1282, 1393
Alw26I	GTCTC	5 cut(s)	982, 2045, 2384, 2621, 2960
AlwNI	CAGNNNCTG	1 cut(s)	1358
Ama87I	CYCGRG	1 cut(s)	97
Aor51HI	AGCGCT	1 cut(s)	704
AoxI	GGCC	7 cut(s)	344, 572, 1616, 2187, 2231, 2763, 2807
ApoI	RAATTY	7 cut(s)	166, 226, 1229, 1263, 1847, 2371, 2947
ArsI	GACNNNNNNTTYG	2 cut(s)	362, 394
Asp700I	GAANNNNTTC	3 cut(s)	792, 817, 1128
AspLEI	GCGC	2 cut(s)	213, 705
AsuC2I	CCSGG	3 cut(s)	215, 641, 1620
AsuHPI	GGTGA	7 cut(s)	305, 419, 655, 1912, 2020, 2488, 2596
AvaI	CYCGRG	1 cut(s)	97
AvaII	GGWCC	4 cut(s)	637, 1858, 2329, 2905
BaeGI	GKGCMC	3 cut(s)	1500, 1975, 2551
BamHI	GGATCC	2 cut(s)	628, 1472
BanI	GGYRCC	1 cut(s)	1333
BanII	GRGCYC	3 cut(s)	161, 672, 763
BauI	CACGAG	2 cut(s)	2004, 2580
BbsI	GAAGAC	1 cut(s)	1514
Bbv12I	GWGCWC	6 cut(s)	161, 658, 672, 763, 1282, 1393
BccI	CCATC	4 cut(s)	922, 992, 1532, 1564
BceAI	ACGGC	1 cut(s)	319
BcgI	CGANNNNNNTGC	2 cut(s)	534, 568
BciT130I	CCWGG	4 cut(s)	894, 1284, 1615, 1752
BcnI	CCSGG	3 cut(s)	215, 641, 1620
BcoDI	GTCTC	5 cut(s)	982, 2045, 2384, 2621, 2960
BfmI	CTRYAG	4 cut(s)	780, 1345, 2178, 2754
BfoI	RGCGCY	1 cut(s)	706
BglI	GCCNNNNNGGC	2 cut(s)	580, 1245
BglII	AGATCT	1 cut(s)	1768
BlpI	GCTNAGC	1 cut(s)	666
Bme1390I	CCNGG	7 cut(s)	215, 641, 894, 1284, 1615, 1620, 1752
Bme18I	GGWCC	4 cut(s)	637, 1858, 2329, 2905
BmeT110I	CYCGRG	1 cut(s)	97
BmgBI	CACGTC	1 cut(s)	192
BmiI	GGNNCC	6 cut(s)	337, 630, 639, 1335, 1434, 1474
BmrFI	CCNGG	7 cut(s)	215, 641, 894, 1284, 1615, 1620, 1752
BpiI	GAAGAC	1 cut(s)	1514
BplI	GAGNNNNNCTC	2 cut(s)	962, 994
BpmI	CTGGAG	1 cut(s)	1341
Bpu10I	CCTNAGC	4 cut(s)	1087, 1308, 2451, 3027
Bpu1102I	GCTNAGC	1 cut(s)	666
BpuEI	CTTGAG	4 cut(s)	145, 383, 951, 1214
BpuMI	CCSGG	3 cut(s)	215, 641, 1620
BsaBI	GATNNNNATC	1 cut(s)	627
BsaHI	GRCGYC	1 cut(s)	551
BsaJI	CCNNGG	5 cut(s)	270, 633, 1240, 1741, 1854
BsaWI	WCCGGW	3 cut(s)	1860, 2150, 2726
Bsc4I	CCNNNNNNNGG	7 cut(s)	582, 1242, 1243, 1289, 1860, 2197, 2773
Bse1I	ACTGG	4 cut(s)	1530, 1837, 2234, 2810
Bse3DI	GCAATG	2 cut(s)	206, 914
Bse8I	GATNNNNATC	1 cut(s)	627
BseBI	CCWGG	4 cut(s)	894, 1284, 1615, 1752
BseDI	CCNNGG	5 cut(s)	270, 633, 1240, 1741, 1854
BseGI	GGATG	6 cut(s)	628, 880, 1543, 1729, 1975, 2551
BseJI	GATNNNNATC	1 cut(s)	627
BseLI	CCNNNNNNNGG	7 cut(s)	582, 1242, 1243, 1289, 1860, 2197, 2773
BseMI	GCAATG	2 cut(s)	206, 914
BseMII	CTCAG	8 cut(s)	657, 678, 1101, 1350, 1956, 2442, 2532, 3018
BseNI	ACTGG	4 cut(s)	1530, 1837, 2234, 2810
BseRI	GAGGAG	2 cut(s)	753, 1211
BseSI	GKGCMC	3 cut(s)	1500, 1975, 2551
BseYI	CCCAGC	3 cut(s)	1328, 2031, 2607
BsgI	GTGCAG	2 cut(s)	187, 1047
Bsh1236I	CGCG	1 cut(s)	224
Bsh1285I	CGRYCG	2 cut(s)	184, 1624
BshFI	GGCC	7 cut(s)	346, 574, 1618, 2189, 2233, 2765, 2809
BshNI	GGYRCC	1 cut(s)	1333
BsiEI	CGRYCG	2 cut(s)	184, 1624
BsiHKAI	GWGCWC	6 cut(s)	161, 658, 672, 763, 1282, 1393
BsiHKCI	CYCGRG	1 cut(s)	97
BsiSI	CCGG	7 cut(s)	215, 333, 641, 1620, 1861, 2151, 2727
BslI	CCNNNNNNNGG	7 cut(s)	582, 1242, 1243, 1289, 1860, 2197, 2773
BsmAI	GTCTC	5 cut(s)	982, 2045, 2384, 2621, 2960
BsmBI	CGTCTC	2 cut(s)	2384, 2960
BsnI	GGCC	7 cut(s)	346, 574, 1618, 2189, 2233, 2765, 2809
BsoBI	CYCGRG	1 cut(s)	97
Bsp1286I	GDGCHC	9 cut(s)	161, 658, 672, 763, 1282, 1393, 1500, 1975, 2551
Bsp1720I	GCTNAGC	1 cut(s)	666
BspANI	GGCC	7 cut(s)	346, 574, 1618, 2189, 2233, 2765, 2809
BspCNI	CTCAG	8 cut(s)	658, 679, 1100, 1351, 1957, 2443, 2533, 3019
BspFNI	CGCG	1 cut(s)	224
BspLI	GGNNCC	6 cut(s)	337, 630, 639, 1335, 1434, 1474
BspQI	GCTCTTC	3 cut(s)	1041, 2457, 3033
BspT107I	GGYRCC	1 cut(s)	1333
BsrDI	GCAATG	2 cut(s)	206, 914
BsrI	ACTGG	4 cut(s)	1530, 1837, 2234, 2810
BssECI	CCNNGG	5 cut(s)	270, 633, 1240, 1741, 1854
BssNI	GRCGYC	1 cut(s)	551
BssSI	CACGAG	2 cut(s)	2004, 2580
BssT1I	CCWWGG	3 cut(s)	633, 1240, 1854
Bst2BI	CACGAG	2 cut(s)	2004, 2580
Bst2UI	CCWGG	4 cut(s)	894, 1284, 1615, 1752
Bst4CI	ACNGT	3 cut(s)	683, 734, 997
BstACI	GRCGYC	1 cut(s)	551
BstAPI	GCANNNNNTGC	4 cut(s)	916, 1772, 1952, 2528
BstC8I	GCNNGC	4 cut(s)	15, 858, 2187, 2763
BstDSI	CCRYGG	1 cut(s)	1741
BstEII	GGTNACC	2 cut(s)	2026, 2602
BstF5I	GGATG	6 cut(s)	628, 880, 1543, 1729, 1975, 2551
BstFNI	CGCG	1 cut(s)	224
BstH2I	RGCGCY	1 cut(s)	706
BstHHI	GCGC	2 cut(s)	213, 705
BstMAI	GTCTC	5 cut(s)	982, 2045, 2384, 2621, 2960
BstMCI	CGRYCG	2 cut(s)	184, 1624
BstNI	CCWGG	4 cut(s)	894, 1284, 1615, 1752
BstNSI	RCATGY	3 cut(s)	923, 2363, 2939
BstPI	GGTNACC	2 cut(s)	2026, 2602
BstSCI	CCNGG	7 cut(s)	213, 639, 892, 1282, 1613, 1618, 1750
BstSFI	CTRYAG	4 cut(s)	780, 1345, 2178, 2754
BstSLI	GKGCMC	3 cut(s)	1500, 1975, 2551
BstUI	CGCG	1 cut(s)	224
BstV2I	GAAGAC	1 cut(s)	1514
BstX2I	RGATCY	8 cut(s)	628, 1355, 1472, 1768, 2009, 2482, 2585, 3058
BstXI	CCANNNNNNTGG	2 cut(s)	1937, 2513
BstYI	RGATCY	8 cut(s)	628, 1355, 1472, 1768, 2009, 2482, 2585, 3058
BsuRI	GGCC	7 cut(s)	346, 574, 1618, 2189, 2233, 2765, 2809
BtgI	CCRYGG	1 cut(s)	1741
BtgZI	GCGATG	1 cut(s)	135
BtrI	CACGTC	1 cut(s)	192
BtsCI	GGATG	6 cut(s)	628, 880, 1543, 1729, 1975, 2551
BtsI	GCAGTG	1 cut(s)	85
BtsIMutI	CAGTG	2 cut(s)	85, 771
Cac8I	GCNNGC	4 cut(s)	15, 858, 2187, 2763
CaiI	CAGNNNCTG	1 cut(s)	1358
CfoI	GCGC	2 cut(s)	213, 705
CseI	GACGC	4 cut(s)	540, 1519, 2401, 2977
Csp6I	GTAC	2 cut(s)	1045, 1210
CviQI	GTAC	2 cut(s)	1045, 1210
DraI	TTTAAA	1 cut(s)	1156
EciI	GGCGGA	1 cut(s)	635
Ecl136II	GAGCTC	3 cut(s)	159, 670, 761
Eco130I	CCWWGG	3 cut(s)	633, 1240, 1854
Eco24I	GRGCYC	3 cut(s)	161, 672, 763
Eco47I	GGWCC	4 cut(s)	637, 1858, 2329, 2905
Eco47III	AGCGCT	1 cut(s)	704
Eco53kI	GAGCTC	3 cut(s)	159, 670, 761
Eco57I	CTGAAG	2 cut(s)	1059, 1923
Eco88I	CYCGRG	1 cut(s)	97
Eco91I	GGTNACC	2 cut(s)	2026, 2602
EcoICRI	GAGCTC	3 cut(s)	159, 670, 761
EcoO109I	RGGNCCY	3 cut(s)	637, 2329, 2905
EcoO65I	GGTNACC	2 cut(s)	2026, 2602
EcoRI	GAATTC	1 cut(s)	1263
EcoRII	CCWGG	4 cut(s)	892, 1282, 1613, 1750
EcoT14I	CCWWGG	3 cut(s)	633, 1240, 1854
EcoT22I	ATGCAT	2 cut(s)	2365, 2941
EcoT38I	GRGCYC	3 cut(s)	161, 672, 763
ErhI	CCWWGG	3 cut(s)	633, 1240, 1854
Esp3I	CGTCTC	2 cut(s)	2384, 2960
FalI	AAGNNNNNCTT	4 cut(s)	38, 2469, 2501, 3045
FauI	CCCGC	2 cut(s)	299, 1244
FauNDI	CATATG	2 cut(s)	2314, 2890
FblI	GTMKAC	2 cut(s)	252, 729
FokI	GGATG	6 cut(s)	635, 887, 1550, 1736, 1962, 2538
FriOI	GRGCYC	3 cut(s)	161, 672, 763
GlaI	GCGC	2 cut(s)	212, 704
GsaI	CCCAGC	3 cut(s)	1332, 2035, 2611
GsuI	CTGGAG	1 cut(s)	1341
HaeII	RGCGCY	1 cut(s)	706
HaeIII	GGCC	7 cut(s)	346, 574, 1618, 2189, 2233, 2765, 2809
HapII	CCGG	7 cut(s)	215, 333, 641, 1620, 1861, 2151, 2727
HgaI	GACGC	4 cut(s)	540, 1519, 2401, 2977
HhaI	GCGC	2 cut(s)	213, 705
Hin1I	GRCGYC	1 cut(s)	551
Hin6I	GCGC	2 cut(s)	211, 703
HinP1I	GCGC	2 cut(s)	211, 703
HincII	GTYRAC	3 cut(s)	253, 1813, 1830
HindII	GTYRAC	3 cut(s)	253, 1813, 1830
HindIII	AAGCTT	1 cut(s)	15
HinfI	GANTC	9 cut(s)	174, 196, 266, 281, 689, 806, 1129, 1626, 1907
HpaII	CCGG	7 cut(s)	215, 333, 641, 1620, 1861, 2151, 2727
HphI	GGTGA	7 cut(s)	305, 419, 655, 1912, 2020, 2488, 2596
Hpy166II	GTNNAC	6 cut(s)	253, 730, 993, 1813, 1830, 1838
Hpy8I	GTNNAC	6 cut(s)	253, 730, 993, 1813, 1830, 1838
Hpy99I	CGWCG	2 cut(s)	196, 556
HpyCH4III	ACNGT	3 cut(s)	683, 734, 997
HpyCH4IV	ACGT	3 cut(s)	191, 723, 1659
HpySE526I	ACGT	3 cut(s)	191, 723, 1659
Hsp92I	GRCGYC	1 cut(s)	551
HspAI	GCGC	2 cut(s)	211, 703
LguI	GCTCTTC	3 cut(s)	1041, 2457, 3033
LmnI	GCTCC	9 cut(s)	335, 373, 1053, 1277, 1438, 2040, 2153, 2616, 2729
MaeII	ACGT	3 cut(s)	191, 723, 1659
MaeIII	GTNAC	9 cut(s)	769, 2026, 2143, 2219, 2355, 2602, 2719, 2795, 2931
MfeI	CAATTG	4 cut(s)	1947, 2226, 2523, 2802
MflI	RGATCY	8 cut(s)	628, 1355, 1472, 1768, 2009, 2482, 2585, 3058
MhlI	GDGCHC	9 cut(s)	161, 658, 672, 763, 1282, 1393, 1500, 1975, 2551
MlyI	GAGTC	2 cut(s)	698, 1916
MmeI	TCCRAC	6 cut(s)	71, 534, 579, 985, 1360, 1450
Mph1103I	ATGCAT	2 cut(s)	2365, 2941
MroXI	GAANNNNTTC	3 cut(s)	792, 817, 1128
MslI	CAYNNNNRTG	2 cut(s)	1935, 2511
MspA1I	CMGCKG	2 cut(s)	180, 1031
MspI	CCGG	7 cut(s)	215, 333, 641, 1620, 1861, 2151, 2727
MspR9I	CCNGG	7 cut(s)	215, 641, 894, 1284, 1615, 1620, 1752
MunI	CAATTG	4 cut(s)	1947, 2226, 2523, 2802
MvaI	CCWGG	4 cut(s)	894, 1284, 1615, 1752
MvnI	CGCG	1 cut(s)	224
NciI	CCSGG	3 cut(s)	215, 641, 1620
NdeI	CATATG	2 cut(s)	2314, 2890
NlaIV	GGNNCC	6 cut(s)	337, 630, 639, 1335, 1434, 1474
NmeAIII	GCCGAG	2 cut(s)	180, 1372
NmuCI	GTSAC	7 cut(s)	769, 2026, 2143, 2219, 2602, 2719, 2795
NsiI	ATGCAT	2 cut(s)	2365, 2941
NspI	RCATGY	3 cut(s)	923, 2363, 2939
PciSI	GCTCTTC	3 cut(s)	1041, 2457, 3033
PdmI	GAANNNNTTC	3 cut(s)	792, 817, 1128
PfeI	GAWTC	7 cut(s)	174, 196, 266, 281, 806, 1129, 1626
PflMI	CCANNNNNTGG	2 cut(s)	2197, 2773
PleI	GAGTC	2 cut(s)	697, 1915
PpsI	GAGTC	2 cut(s)	697, 1915
PpuMI	RGGWCCY	3 cut(s)	637, 2329, 2905
Psp124BI	GAGCTC	3 cut(s)	161, 672, 763
Psp5II	RGGWCCY	3 cut(s)	637, 2329, 2905
Psp6I	CCWGG	4 cut(s)	892, 1282, 1613, 1750
PspEI	GGTNACC	2 cut(s)	2026, 2602
PspFI	CCCAGC	3 cut(s)	1328, 2031, 2607
PspGI	CCWGG	4 cut(s)	892, 1282, 1613, 1750
PspN4I	GGNNCC	6 cut(s)	337, 630, 639, 1335, 1434, 1474
PspPPI	RGGWCCY	3 cut(s)	637, 2329, 2905
PstNI	CAGNNNCTG	1 cut(s)	1358
PsuI	RGATCY	8 cut(s)	628, 1355, 1472, 1768, 2009, 2482, 2585, 3058
PvuII	CAGCTG	1 cut(s)	1031
RsaI	GTAC	2 cut(s)	1046, 1211
RsaNI	GTAC	2 cut(s)	1045, 1210
RseI	CAYNNNNRTG	2 cut(s)	1935, 2511
SacI	GAGCTC	3 cut(s)	161, 672, 763
SalI	GTCGAC	1 cut(s)	251
SapI	GCTCTTC	3 cut(s)	1041, 2457, 3033
SchI	GAGTC	2 cut(s)	698, 1916
ScrFI	CCNGG	7 cut(s)	215, 641, 894, 1284, 1615, 1620, 1752
SduI	GDGCHC	9 cut(s)	161, 658, 672, 763, 1282, 1393, 1500, 1975, 2551
SfcI	CTRYAG	4 cut(s)	780, 1345, 2178, 2754
SinI	GGWCC	4 cut(s)	637, 1858, 2329, 2905
SmiMI	CAYNNNNRTG	2 cut(s)	1935, 2511
SmlI	CTYRAG	4 cut(s)	160, 362, 966, 1193
SmoI	CTYRAG	4 cut(s)	160, 362, 966, 1193
SspI	AATATT	1 cut(s)	1789
SstI	GAGCTC	3 cut(s)	161, 672, 763
StyD4I	CCNGG	7 cut(s)	213, 639, 892, 1282, 1613, 1618, 1750
StyI	CCWWGG	3 cut(s)	633, 1240, 1854
TaaI	ACNGT	3 cut(s)	683, 734, 997
TaiI	ACGT	3 cut(s)	194, 726, 1662
TatI	WGTACW	1 cut(s)	1044
TauI	GCSGC	3 cut(s)	586, 2446, 3022
TfiI	GAWTC	7 cut(s)	174, 196, 266, 281, 806, 1129, 1626
TscAI	CASTG	2 cut(s)	92, 778
TseFI	GTSAC	7 cut(s)	769, 2026, 2143, 2219, 2602, 2719, 2795
Tsp45I	GTSAC	7 cut(s)	769, 2026, 2143, 2219, 2602, 2719, 2795
TspGWI	ACGGA	1 cut(s)	1897
TspRI	CASTG	2 cut(s)	92, 778
Van91I	CCANNNNNTGG	2 cut(s)	2197, 2773
VpaK11BI	GGWCC	4 cut(s)	637, 1858, 2329, 2905
XapI	RAATTY	7 cut(s)	166, 226, 1229, 1263, 1847, 2371, 2947
XceI	RCATGY	3 cut(s)	923, 2363, 2939
XmiI	GTMKAC	2 cut(s)	252, 729
XmnI	GAANNNNTTC	3 cut(s)	792, 817, 1128
Zsp2I	ATGCAT	2 cut(s)	2365, 2941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.