Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Reverse (-)

41811246 .. 41819816

Gene Structure 8571 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002923

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGATTACTCTGCAAGCTTCGCTTCTCCTTAACCTCCCACTCACTCCAACTCTTTCTTCTTCTTCACTCAAACGCTTTCACTTCTCTCGCTCGGGTTCTTATAGTTGCAGCCCTGTTTTTCTTCCCAACATCAATGTCTCTTCATCGCCGAGCTCAAGAAATTTCAGATTCAGCGGTCGGAACACGTCGATTCCCTGCACATTGCACCCGGAGAACGCGAATTTGGATCAAGAATCGAACTTTGTCGACACCCGTTTGGATTCGGAAGGGAAAGAATCGAGCTTCGATGAAATTAACGGCGGGGATTTGAGTAATAGCTCCGTTGCCGGAGCCGAAAGGCCCGAAAGTGAGAAACTTGAGGCGAAGGGGCAGTCTGGGGAGGTGGGTTTGGAGAATGGGGGTGAGAAGAGTGAGGGAGTGGTGGTGGAGAGTGAGGGAAAGAGTGGGGGTTTGGTTGAGAAGAAGAGTGGGAATGGGTTGCCATTGGTGGTGTTCTTCATGGGGTTGTGGGCAACTGCAAGAAGAGGGTTTGAGAAGGCATTGGCGTCGGAATGGTTCAGTTGGTGGCCGTTTTGGCGGCAGGAGAAGCGGTTGGAGAGGCTGATTGCGGAGGCGGATGCGGATCCCAAGGACCCGGTGAAGCAGAGTGCTCTGTTTGCTGAGCTCAATAAGCACAGTCCTGAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCACGTTGTAGACAGTAGAGGAGTTGCAGAGTATCTTCGAGCTCTTGTGGTCACTGATGCTATAGCTGAATATCTTCCAAACGATGAATCTGGAAAGCCTTCTGCTCTTCCCTCACTGTTGCAAGAATTGCAACAGCGTGCATCAGGCAACTTGGATGAACCCTTTGTCAAACCTGGCATAAATGAGAAGCAACCGTTGCACGTGCTGATGGTCGAACCGAAAGTATCAAACAAATCTCGTTTTACTCAAGAGCTTGTCTCAACCATCTTGTTCACAGTTGCTGTTGGATTAGTGTGGTTTATGGGTGCAGCTGCTCTTCAAAAGTACATAGGGAGCTTGGGTGGAATAGGTGCTTCAGGTGTTGGCTCAAGTTCTTCCTATACGCCAAAGGAGTTGAATAAAGAAGTGATTCCAGAAAAGAATGTTAAAACCTTTAAAGATGTCAAAGGCTGTGATGATGCAAAGCAAGAGCTTGAGGAGGTAGTGGAGTACCTCAAAAACCCAACTAAGTTTACCCGCCTTGGGGGCAAGTTGCCAAAGGGAATTCTTTTGACAGGAGCACCAGGAACAGGAAAGACATTACTTGCTAAGGCTATTGCTGGAGAAGCTGGGGTGCCATTTTTCTATAGAGCAGGATCTGAGTTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCGTTATTTCAAGCAGCTAAGAAAAAGGCTCCTTGCATCATTTTCATTGATGAAATAGATGCTGTTGGATCCACTCGGAAACAATGGGAAGGGCACACAAAGAAGACGCTGCATCAATTACTGGTTGAAATGGATGGTTTCGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACCAACTTGCCTGATATTCTTGATCCAGCATTGACCAGGCCCGGTCGATTCGACAGGCATATTGTTGTCCCAAATCCAGACGTCCGAGGTCGTCAAGAGATTTTGGAACTTTATCTTCAAGATAAGCCATTAGCTGATGATGTGGATGCTAAAGCAATAGCCCGTGGCACACCAGGATTTAATGGGGCAGATCTTGCGAACTTGGTTAATATTGCTGCTATAAAAGCTGCTGTTGATGGGGCTGACAAGTTGACTGGTTCACAATTAGAATTTGCCAAGGATAGGATAGTAATGGGAACAGAACGTAAAACAATGTTCATATCTGAAGAGTCAAAAAAGCTCACCGCATACCATGAAAGTGGTCATGCCATTGTTGCTTTGAATACGGAGGGGGCACATCCAATTCACAAGGCTACAATCCTGCCTCGTGGATCTGCTTTGGGAATGGTTACCCAGCTCCCTTCAAGTGATGAGACATCAATTAGCAAGAAGCAGCTATTAGCTCGTCTTGATGTCTGCATGGGAGGAAGAGTAGCAGAAGAGATTATCTTTGGTCAGGATTTTGTCACAACCGGAGCAAGTAGTGATCTAAACACAGCTACAGAGCTGGCCCACTATATGGTATCAAGCTGCGGTATGAGTGACACAATTGGGCCAGTTCATGTCAAAGAGCGACCAAGTTCTGAAATGCAATCTCGTATTGATGCAGAAGTTGTGAAAATGTTAAGGGAAGCATATGATCGTGTAAAGGCCCTCCTAAAGAAGCATGAGAAGGCGTTACATGCACTGGCAAGTGCACTTTTGGAGTATGAGACGCTCAGTTCAGAAGAAATTAAGCGTATTATGCTGCCTTATCAGGAAGGACGGCTGCCTGAGCTACAAGAAGAGCAACAAGAAGAAGGGGATCTTGTATTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

831

Amino Acids

90.66

Weight (kDa)

5.66

Isoelectric Point (pI)

46.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	420 - 548	7.1e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	571 - 614	4.7e-09	AAA+ lid domain
Peptidase_M41	PF01434	630 - 805	8.8e-60	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1656
AccB1I	GGYRCC	1 cut(s)	1327
AccB7I	CCANNNNNTGG	1 cut(s)	2191
AccI	GTMKAC	2 cut(s)	246, 723
AccII	CGCG	1 cut(s)	218
AcoI	YGGCCR	1 cut(s)	566
AcsI	RAATTY	4 cut(s)	160, 220, 1257, 1841
AcuI	CTGAAG	2 cut(s)	1053, 1917
AcvI	CACGTG	1 cut(s)	916
AcyI	GRCGYC	2 cut(s)	545, 1653
AfaI	GTAC	2 cut(s)	1040, 1205
AfeI	AGCGCT	1 cut(s)	698
AfiI	CCNNNNNNNGG	5 cut(s)	1236, 1237, 1283, 1854, 2191
AflIII	ACRYGT	1 cut(s)	183
AgsI	TTSAA	9 cut(s)	704, 1034, 1111, 1361, 1409, 1526, 1691, 1954, 2037
AjiI	CACGTC	1 cut(s)	186
AjnI	CCWGG	4 cut(s)	886, 1276, 1607, 1744
AjuI	GAANNNNNNNTTGG	6 cut(s)	40, 72, 206, 238, 1356, 1388
Alw21I	GWGCWC	7 cut(s)	155, 652, 666, 757, 1276, 1387, 2371
Alw26I	GTCTC	4 cut(s)	142, 976, 2039, 2378
Alw44I	GTGCAC	1 cut(s)	2367
AlwNI	CAGNNNCTG	2 cut(s)	995, 1352
Ama87I	CYCGRG	1 cut(s)	91
Aor51HI	AGCGCT	1 cut(s)	698
AoxI	GGCC	6 cut(s)	338, 566, 1610, 2181, 2225, 2322
ApaLI	GTGCAC	1 cut(s)	2367
ApoI	RAATTY	4 cut(s)	160, 220, 1257, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
Asp700I	GAANNNNTTC	3 cut(s)	786, 811, 1122
AspLEI	GCGC	1 cut(s)	699
AspS9I	GGNCC	6 cut(s)	339, 631, 1611, 2182, 2225, 2323
AsuC2I	CCSGG	3 cut(s)	209, 635, 1614
AsuHPI	GGTGA	3 cut(s)	413, 649, 1906
AvaI	CYCGRG	1 cut(s)	91
AvaII	GGWCC	1 cut(s)	631
BaeGI	GKGCMC	3 cut(s)	1494, 1969, 2371
BamHI	GGATCC	2 cut(s)	622, 1466
BanI	GGYRCC	1 cut(s)	1327
BanII	GRGCYC	3 cut(s)	155, 666, 757
BauI	CACGAG	1 cut(s)	1998
BbrPI	CACGTG	1 cut(s)	916
BbsI	GAAGAC	1 cut(s)	1508
Bbv12I	GWGCWC	7 cut(s)	155, 652, 666, 757, 1276, 1387, 2371
BccI	CCATC	5 cut(s)	916, 986, 1526, 1558, 1802
BceAI	ACGGC	3 cut(s)	313, 553, 2453
BcgI	CGANNNNNNTGC	2 cut(s)	528, 562
BciT130I	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BcnI	CCSGG	3 cut(s)	209, 635, 1614
BcoDI	GTCTC	4 cut(s)	142, 976, 2039, 2378
BfmI	CTRYAG	3 cut(s)	774, 1339, 2172
BfoI	RGCGCY	1 cut(s)	700
BglI	GCCNNNNNGGC	2 cut(s)	574, 1239
BglII	AGATCT	1 cut(s)	1762
BlpI	GCTNAGC	1 cut(s)	660
Bme1390I	CCNGG	7 cut(s)	209, 635, 888, 1278, 1609, 1614, 1746
Bme18I	GGWCC	1 cut(s)	631
BmeT110I	CYCGRG	1 cut(s)	91
BmgBI	CACGTC	1 cut(s)	186
BmgT120I	GGNCC	6 cut(s)	339, 631, 1611, 2182, 2225, 2323
BmiI	GGNNCC	6 cut(s)	331, 624, 633, 1329, 1428, 1468
BmrFI	CCNGG	7 cut(s)	209, 635, 888, 1278, 1609, 1614, 1746
BmsI	GCATC	9 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708, 2266
BpiI	GAAGAC	1 cut(s)	1508
BplI	GAGNNNNNCTC	2 cut(s)	956, 988
BpmI	CTGGAG	1 cut(s)	1335
Bpu10I	CCTNAGC	2 cut(s)	1302, 2445
Bpu1102I	GCTNAGC	1 cut(s)	660
BpuEI	CTTGAG	5 cut(s)	139, 377, 945, 1066, 1208
BpuMI	CCSGG	3 cut(s)	209, 635, 1614
BsaAI	YACGTR	1 cut(s)	916
BsaBI	GATNNNNATC	1 cut(s)	621
BsaHI	GRCGYC	2 cut(s)	545, 1653
BsaJI	CCNNGG	5 cut(s)	627, 1234, 1657, 1735, 1848
BsaWI	WCCGGW	1 cut(s)	2144
BsaXI	ACNNNNNCTCC	8 cut(s)	408, 438, 575, 605, 1039, 1069, 2088, 2118
Bsc4I	CCNNNNNNNGG	5 cut(s)	1236, 1237, 1283, 1854, 2191
Bse1I	ACTGG	4 cut(s)	1524, 1831, 2228, 2364
Bse3DI	GCAATG	1 cut(s)	200
Bse8I	GATNNNNATC	1 cut(s)	621
BseBI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BseDI	CCNNGG	5 cut(s)	627, 1234, 1657, 1735, 1848
BseGI	GGATG	5 cut(s)	622, 874, 1537, 1723, 1969
BseJI	GATNNNNATC	1 cut(s)	621
BseLI	CCNNNNNNNGG	5 cut(s)	1236, 1237, 1283, 1854, 2191
BseMI	GCAATG	1 cut(s)	200
BseMII	CTCAG	5 cut(s)	651, 672, 1344, 2404, 2436
BseNI	ACTGG	4 cut(s)	1524, 1831, 2228, 2364
BseRI	GAGGAG	2 cut(s)	747, 1205
BseSI	GKGCMC	3 cut(s)	1494, 1969, 2371
BseYI	CCCAGC	2 cut(s)	1322, 2025
BsgI	GTGCAG	2 cut(s)	181, 1041
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	2 cut(s)	178, 1618
BshFI	GGCC	6 cut(s)	340, 568, 1612, 2183, 2227, 2324
BshNI	GGYRCC	1 cut(s)	1327
BsiEI	CGRYCG	2 cut(s)	178, 1618
BsiHKAI	GWGCWC	7 cut(s)	155, 652, 666, 757, 1276, 1387, 2371
BsiHKCI	CYCGRG	1 cut(s)	91
BsiSI	CCGG	5 cut(s)	209, 327, 635, 1614, 2145
BslFI	GGGAC	1 cut(s)	1625
BslI	CCNNNNNNNGG	5 cut(s)	1236, 1237, 1283, 1854, 2191
BsmAI	GTCTC	4 cut(s)	142, 976, 2039, 2378
BsmBI	CGTCTC	1 cut(s)	2378
BsmFI	GGGAC	1 cut(s)	1625
BsnI	GGCC	6 cut(s)	340, 568, 1612, 2183, 2227, 2324
BsoBI	CYCGRG	1 cut(s)	91
Bsp1286I	GDGCHC	9 cut(s)	155, 652, 666, 757, 1276, 1387, 1494, 1969, 2371
Bsp1720I	GCTNAGC	1 cut(s)	660
BspANI	GGCC	6 cut(s)	340, 568, 1612, 2183, 2227, 2324
BspCNI	CTCAG	5 cut(s)	652, 673, 1345, 2403, 2437
BspFNI	CGCG	1 cut(s)	218
BspLI	GGNNCC	6 cut(s)	331, 624, 633, 1329, 1428, 1468
BspQI	GCTCTTC	3 cut(s)	825, 1035, 2451
BspT107I	GGYRCC	1 cut(s)	1327
BsrDI	GCAATG	1 cut(s)	200
BsrI	ACTGG	4 cut(s)	1524, 1831, 2228, 2364
BssECI	CCNNGG	5 cut(s)	627, 1234, 1657, 1735, 1848
BssNI	GRCGYC	2 cut(s)	545, 1653
BssSI	CACGAG	1 cut(s)	1998
BssT1I	CCWWGG	3 cut(s)	627, 1234, 1848
Bst2BI	CACGAG	1 cut(s)	1998
Bst2UI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
Bst4CI	ACNGT	5 cut(s)	677, 728, 831, 909, 991
BstACI	GRCGYC	2 cut(s)	545, 1653
BstAPI	GCANNNNNTGC	3 cut(s)	841, 910, 1766
BstBAI	YACGTR	1 cut(s)	916
BstC8I	GCNNGC	3 cut(s)	15, 852, 2181
BstDEI	CTNAG	8 cut(s)	660, 681, 1221, 1302, 1353, 1416, 2390, 2445
BstDSI	CCRYGG	1 cut(s)	1735
BstEII	GGTNACC	1 cut(s)	2020
BstF5I	GGATG	5 cut(s)	622, 874, 1537, 1723, 1969
BstFNI	CGCG	1 cut(s)	218
BstH2I	RGCGCY	1 cut(s)	700
BstHHI	GCGC	1 cut(s)	699
BstMAI	GTCTC	4 cut(s)	142, 976, 2039, 2378
BstMCI	CGRYCG	2 cut(s)	178, 1618
BstNI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
BstNSI	RCATGY	1 cut(s)	2357
BstPI	GGTNACC	1 cut(s)	2020
BstSCI	CCNGG	7 cut(s)	207, 633, 886, 1276, 1607, 1612, 1744
BstSFI	CTRYAG	3 cut(s)	774, 1339, 2172
BstSLI	GKGCMC	3 cut(s)	1494, 1969, 2371
BstUI	CGCG	1 cut(s)	218
BstV2I	GAAGAC	1 cut(s)	1508
BstX2I	RGATCY	6 cut(s)	622, 1349, 1466, 1762, 2003, 2476
BstXI	CCANNNNNNTGG	1 cut(s)	1931
BstYI	RGATCY	6 cut(s)	622, 1349, 1466, 1762, 2003, 2476
BsuRI	GGCC	6 cut(s)	340, 568, 1612, 2183, 2227, 2324
BtgI	CCRYGG	1 cut(s)	1735
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	1 cut(s)	186
BtsCI	GGATG	5 cut(s)	622, 874, 1537, 1723, 1969
BtsIMutI	CAGTG	3 cut(s)	765, 827, 2357
Cac8I	GCNNGC	3 cut(s)	15, 852, 2181
CaiI	CAGNNNCTG	2 cut(s)	995, 1352
CfoI	GCGC	1 cut(s)	699
Cfr13I	GGNCC	6 cut(s)	339, 631, 1611, 2182, 2225, 2323
CseI	GACGC	3 cut(s)	534, 1513, 2395
Csp6I	GTAC	2 cut(s)	1039, 1204
CviAII	CATG	7 cut(s)	499, 1925, 1937, 2092, 2234, 2339, 2354
CviQI	GTAC	2 cut(s)	1039, 1204
DdeI	CTNAG	8 cut(s)	660, 681, 1221, 1302, 1353, 1416, 2390, 2445
DraI	TTTAAA	1 cut(s)	1150
EaeI	YGGCCR	1 cut(s)	566
EciI	GGCGGA	1 cut(s)	629
Ecl136II	GAGCTC	3 cut(s)	153, 664, 755
Eco130I	CCWWGG	3 cut(s)	627, 1234, 1848
Eco24I	GRGCYC	3 cut(s)	155, 666, 757
Eco47I	GGWCC	1 cut(s)	631
Eco47III	AGCGCT	1 cut(s)	698
Eco53kI	GAGCTC	3 cut(s)	153, 664, 755
Eco57I	CTGAAG	2 cut(s)	1053, 1917
Eco72I	CACGTG	1 cut(s)	916
Eco88I	CYCGRG	1 cut(s)	91
Eco91I	GGTNACC	1 cut(s)	2020
EcoICRI	GAGCTC	3 cut(s)	153, 664, 755
EcoO109I	RGGNCCY	2 cut(s)	631, 2323
EcoO65I	GGTNACC	1 cut(s)	2020
EcoRI	GAATTC	1 cut(s)	1257
EcoRII	CCWGG	4 cut(s)	886, 1276, 1607, 1744
EcoT14I	CCWWGG	3 cut(s)	627, 1234, 1848
EcoT38I	GRGCYC	3 cut(s)	155, 666, 757
ErhI	CCWWGG	3 cut(s)	627, 1234, 1848
Esp3I	CGTCTC	1 cut(s)	2378
FaeI	CATG	7 cut(s)	502, 1928, 1940, 2095, 2237, 2342, 2357
FalI	AAGNNNNNCTT	2 cut(s)	38, 2463
FaqI	GGGAC	1 cut(s)	1625
FatI	CATG	7 cut(s)	498, 1924, 1936, 2091, 2233, 2338, 2353
FauI	CCCGC	2 cut(s)	293, 1238
FauNDI	CATATG	1 cut(s)	2308
FblI	GTMKAC	2 cut(s)	246, 723
FokI	GGATG	5 cut(s)	629, 881, 1544, 1730, 1956
FriOI	GRGCYC	3 cut(s)	155, 666, 757
GlaI	GCGC	1 cut(s)	698
GsaI	CCCAGC	2 cut(s)	1326, 2029
GsuI	CTGGAG	1 cut(s)	1335
HaeII	RGCGCY	1 cut(s)	700
HaeIII	GGCC	6 cut(s)	340, 568, 1612, 2183, 2227, 2324
HapII	CCGG	5 cut(s)	209, 327, 635, 1614, 2145
HgaI	GACGC	3 cut(s)	534, 1513, 2395
HhaI	GCGC	1 cut(s)	699
Hin1I	GRCGYC	2 cut(s)	545, 1653
Hin1II	CATG	7 cut(s)	502, 1928, 1940, 2095, 2237, 2342, 2357
Hin6I	GCGC	1 cut(s)	697
HinP1I	GCGC	1 cut(s)	697
HincII	GTYRAC	2 cut(s)	247, 1824
HindII	GTYRAC	2 cut(s)	247, 1824
HindIII	AAGCTT	1 cut(s)	15
HpaII	CCGG	5 cut(s)	209, 327, 635, 1614, 2145
HphI	GGTGA	3 cut(s)	413, 649, 1906
Hpy166II	GTNNAC	7 cut(s)	247, 724, 987, 1227, 1824, 1832, 2369
Hpy8I	GTNNAC	7 cut(s)	247, 724, 987, 1227, 1824, 1832, 2369
Hpy99I	CGWCG	2 cut(s)	190, 550
HpyAV	CCTTC	9 cut(s)	260, 358, 529, 822, 1481, 2043, 2338, 2426, 2465
HpyCH4III	ACNGT	5 cut(s)	677, 728, 831, 909, 991
HpyCH4IV	ACGT	5 cut(s)	185, 717, 915, 1653, 1876
HpyF3I	CTNAG	8 cut(s)	660, 681, 1221, 1302, 1353, 1416, 2390, 2445
HpySE526I	ACGT	5 cut(s)	185, 717, 915, 1653, 1876
Hsp92I	GRCGYC	2 cut(s)	545, 1653
Hsp92II	CATG	7 cut(s)	502, 1928, 1940, 2095, 2237, 2342, 2357
HspAI	GCGC	1 cut(s)	697
LguI	GCTCTTC	3 cut(s)	825, 1035, 2451
LmnI	GCTCC	7 cut(s)	323, 329, 1047, 1271, 1432, 2034, 2147
LweI	GCATC	9 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708, 2266
MaeII	ACGT	5 cut(s)	185, 717, 915, 1653, 1876
MaeIII	GTNAC	5 cut(s)	763, 2020, 2137, 2213, 2349
MfeI	CAATTG	1 cut(s)	2220
MflI	RGATCY	6 cut(s)	622, 1349, 1466, 1762, 2003, 2476
MhlI	GDGCHC	9 cut(s)	155, 652, 666, 757, 1276, 1387, 1494, 1969, 2371
MlyI	GAGTC	2 cut(s)	692, 1910
MmeI	TCCRAC	7 cut(s)	71, 158, 528, 573, 979, 1354, 1444
MroXI	GAANNNNTTC	3 cut(s)	786, 811, 1122
MseI	TTAA	8 cut(s)	30, 294, 1140, 1149, 1752, 1779, 2297, 2406
MslI	CAYNNNNRTG	1 cut(s)	1929
MspA1I	CMGCKG	2 cut(s)	174, 1025
MspI	CCGG	5 cut(s)	209, 327, 635, 1614, 2145
MspR9I	CCNGG	7 cut(s)	209, 635, 888, 1278, 1609, 1614, 1746
MunI	CAATTG	1 cut(s)	2220
MvaI	CCWGG	4 cut(s)	888, 1278, 1609, 1746
MvnI	CGCG	1 cut(s)	218
NciI	CCSGG	3 cut(s)	209, 635, 1614
NdeI	CATATG	1 cut(s)	2308
NlaIII	CATG	7 cut(s)	502, 1928, 1940, 2095, 2237, 2342, 2357
NlaIV	GGNNCC	6 cut(s)	331, 624, 633, 1329, 1428, 1468
NmeAIII	GCCGAG	2 cut(s)	174, 1366
NmuCI	GTSAC	3 cut(s)	763, 2137, 2213
NspI	RCATGY	1 cut(s)	2357
PciSI	GCTCTTC	3 cut(s)	825, 1035, 2451
PdmI	GAANNNNTTC	3 cut(s)	786, 811, 1122
PfeI	GAWTC	8 cut(s)	168, 190, 233, 260, 275, 800, 1123, 1620
PflMI	CCANNNNNTGG	1 cut(s)	2191
PleI	GAGTC	2 cut(s)	691, 1909
PmaCI	CACGTG	1 cut(s)	916
PmlI	CACGTG	1 cut(s)	916
PpsI	GAGTC	2 cut(s)	691, 1909
Ppu21I	YACGTR	1 cut(s)	916
PpuMI	RGGWCCY	1 cut(s)	631
Psp124BI	GAGCTC	3 cut(s)	155, 666, 757
Psp5II	RGGWCCY	1 cut(s)	631
Psp6I	CCWGG	4 cut(s)	886, 1276, 1607, 1744
PspCI	CACGTG	1 cut(s)	916
PspEI	GGTNACC	1 cut(s)	2020
PspFI	CCCAGC	2 cut(s)	1322, 2025
PspGI	CCWGG	4 cut(s)	886, 1276, 1607, 1744
PspN4I	GGNNCC	6 cut(s)	331, 624, 633, 1329, 1428, 1468
PspPI	GGNCC	6 cut(s)	339, 631, 1611, 2182, 2225, 2323
PspPPI	RGGWCCY	1 cut(s)	631
PstNI	CAGNNNCTG	2 cut(s)	995, 1352
PsuI	RGATCY	6 cut(s)	622, 1349, 1466, 1762, 2003, 2476
PvuII	CAGCTG	1 cut(s)	1025
RsaI	GTAC	2 cut(s)	1040, 1205
RsaNI	GTAC	2 cut(s)	1039, 1204
RseI	CAYNNNNRTG	1 cut(s)	1929
SacI	GAGCTC	3 cut(s)	155, 666, 757
SalI	GTCGAC	1 cut(s)	245
SapI	GCTCTTC	3 cut(s)	825, 1035, 2451
SaqAI	TTAA	8 cut(s)	30, 294, 1140, 1149, 1752, 1779, 2297, 2406
Sau96I	GGNCC	6 cut(s)	339, 631, 1611, 2182, 2225, 2323
SchI	GAGTC	2 cut(s)	692, 1910
ScrFI	CCNGG	7 cut(s)	209, 635, 888, 1278, 1609, 1614, 1746
SduI	GDGCHC	9 cut(s)	155, 652, 666, 757, 1276, 1387, 1494, 1969, 2371
SfaNI	GCATC	9 cut(s)	607, 760, 863, 1162, 1443, 1447, 1519, 1708, 2266
SfcI	CTRYAG	3 cut(s)	774, 1339, 2172
SinI	GGWCC	1 cut(s)	631
SmiMI	CAYNNNNRTG	1 cut(s)	1929
SmlI	CTYRAG	5 cut(s)	154, 356, 960, 1081, 1187
SmoI	CTYRAG	5 cut(s)	154, 356, 960, 1081, 1187
SspI	AATATT	1 cut(s)	1783
SstI	GAGCTC	3 cut(s)	155, 666, 757
StyD4I	CCNGG	7 cut(s)	207, 633, 886, 1276, 1607, 1612, 1744
StyI	CCWWGG	3 cut(s)	627, 1234, 1848
TaaI	ACNGT	5 cut(s)	677, 728, 831, 909, 991
TaiI	ACGT	5 cut(s)	188, 720, 918, 1656, 1879
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	1 cut(s)	580
TfiI	GAWTC	8 cut(s)	168, 190, 233, 260, 275, 800, 1123, 1620
Tru1I	TTAA	8 cut(s)	30, 294, 1140, 1149, 1752, 1779, 2297, 2406
Tru9I	TTAA	8 cut(s)	30, 294, 1140, 1149, 1752, 1779, 2297, 2406
TscAI	CASTG	3 cut(s)	772, 834, 2364
TseFI	GTSAC	3 cut(s)	763, 2137, 2213
Tsp45I	GTSAC	3 cut(s)	763, 2137, 2213
TspGWI	ACGGA	2 cut(s)	310, 1973
TspRI	CASTG	3 cut(s)	772, 834, 2364
Van91I	CCANNNNNTGG	1 cut(s)	2191
VneI	GTGCAC	1 cut(s)	2367
VpaK11BI	GGWCC	1 cut(s)	631
XapI	RAATTY	4 cut(s)	160, 220, 1257, 1841
XceI	RCATGY	1 cut(s)	2357
XmiI	GTMKAC	2 cut(s)	246, 723
XmnI	GAANNNNTTC	3 cut(s)	786, 811, 1122
ZraI	GACGTC	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.