Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0012486

Physical Location & Seq

Genomic Coordinates Forward (+)

4931596 .. 4948118

Gene Structure 16523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1038500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGACTACTCTACAAGCTTCGCTTCTTCTCAGCCTTTCACTCTCTGCAACCCCTTCTTCTAAATTCAAACGCTTTCAGCTCTCCCGCTCCTCCGCCTCTTTTACTTGGACCCCTAATCTTTATCAAGCTGCGCCTCCAAGTTGTCAAAGTTTCGGATTTATCCATCGTACTTTATCGATTTCTTGCACATTTCACCCTGACAATGCCAGTACGAATCAAGAATCGGACTTGGCGGTGAGTTCTGAAGTCGAAGAATCGAGTTTTAATGAATTTAGTGGGGGGAGTAGCTCGGTATCCAATGTGGGTAAGCAGGAAACTGAGGAATTTGGCGGAGAAAGGTTGGATTTTGAGGTGGAGAGTACGTCTGGGGAAATGGGTTTGGAGAATGGGGACGGAAAGAGTGAGAAGGTGGCGGAAACGGAGGGAAAGAGTGGGAATTTGGTTGGGCAGAAGAATGGAAATGGGATGCCATTGGTGGTGTTCTTGATGGGGTTGTGGGCAACTACAAGAAGTGGGTTCTCGAAGGTGTTGGCTTCCGATTGGTTCAGTTGGTGGCCATTTTCGCAGCAGGAAAAGCGGTTGGAGCGTTTGATTGCAGAGGCTGATGCCAATCCCAAGGACGCTGTAAAGCAGAGTGCTTTGCTGGCTGAGCTCAACAAGCACAGTCCTCAGTCTGTCATCAAGCGCTTTGAACAAAGGGATCATAGTGTGGACAGTAAAGGAGTTGCTGAGTATCTTCGAGCTCTTGTGGTCACTGATGCTATTTCTGATTATCTTCCCGATGACGAATCTGGAAAGCCTTCTAGCCTTCCTTTATTGCTGCAAGAGCTGAAGCAGCGTGCATCAGGCAACATGGACGATCCCTTTCTGAGCCCTGGCATAAATGAGAAGCAGCCATTGCATGTGGTGATGGTTGAACCTAAAGTATCAAATAAATCTCGTTTTGCACAAGAGATTATATCAACTATCTTGTTCACAGTTGCTGTTGGATTAGTGTGGTTCGTGGGTGCTGCTGCTCTTCAAAAGTACATAGGGAGCTTGGGTGGGATAGGTACGTCCGGTGTTGGCTCAAGTTCTTCCTATGCCCCAAAAGAGTTGAATAAAGAAGTGACTCCCGAGAAGAATGTTAAAACATTTAAAGATGTAAAGGGTTGTGATGATGCAAAGAAGGAGCTTGAAGAGGTTGTGGAGTACCTGAAGAACCCAACTAAGTTTACTCGCCTTGGGGGCAAGTTACCTAAGGGAATTCTTTTGACAGGAGCCCCAGGAACTGGAAAGACTTTACTTGCTAAGGCTATTGCTGGAGAAGCTGGTGTACCATTTTTCTATAGAGCAGGATCCGAATTTGAAGAAATGTTTGTTGGAGTTGGTGCTCGCCGTGTAAGGTCCTTATTCCAAGCAGCCAAAAAAAAGGCTCCTTGCATCATCTTTATTGATGAAATAGATGCTGTTGGGTCCACTAGGAAACAATGGGAAGGGCATACGAAGAAAACGCTGCATCAACTACTTGTAGAAATGGATGGTTTTGAGCAGAATGAGGGAATAATTCTGATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCATTGACAAGGCCTGGTAGATTTGATAGGCATATTGTTGTTCCTAATCCGGATGTGCGGGGTCGTCAAGAGATATTGGAGCTCTATCTACAGGACAAACCATTGGGTGATGATATAGATGTTAAAGCTATTGCTCGTGGTACGCCAGGATTCAATGGGGCAGATCTTGCAAACTTGGTAAATATTGCTGCCATTAAAGCTGCTGTTGATGGCGCTGAGAAGCTGACTGCTTCACAGTTGGAGTTTGCGAAGGACAGGATTGTTATGGGTACTGAAAGGAAAACAATGTTCATATCTGAGGACTCGAAAAAGCTCACAGCATATCATGAAAGTGGTCATGCAATTGTTGCTTTGAATACTGAGGGGGCACATCCAATTCACAAGGCAACAATTATGCCTCGTGGGTCTGCTTTAGGAATGGTCACCCAGCTCCCATCAAATGATGAGACATCAGTTAGCAAGAGGCAGTTGTTAGCCCGTCTTGATGTCTGCATGGGAGGAAGAGTGGCAGAAGAGATCATCTTTGGTCAGGATCATATCACAACTGGAGCAAGCAGTGATCTTCACACAGCTACAGAGCTTGCCCACTATATGGTATCAAACTGTGGCATGAGCAACGTCATTGGGCCAGTTCATATCAAAGATCGTCCGAGTCCAGAAATGCAATCTCGTATTGACGCTGAAGTGGTGAAACTGTTAAGAGAAGCATACGATCGTGTAAAAGCACTTCTGAAGAAGCATGAAGAGGCATTGCATACATTGGCAAATGCACTTTTAGAGTACGAAACCCTTGGTGCAGAAGAAATCAAGCGTATTCTTCTTCCATATCAGGATGGCCGGCTACCCGAGCAACAAGAAGAGCAACAAGAGGGGGATCTTGTACTGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010304 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0030163 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

826

Amino Acids

89.99

Weight (kDa)

5.62

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	416 - 544	7e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	567 - 610	3.3e-09	AAA+ lid domain
Peptidase_M41	PF01434	626 - 801	1.6e-59	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53170
fragaria_vesca	FvH4_5g23210 FvH4_5g23210 FvH4_5g23210
malus_domestica	MD06G1038500.v1.1
prunus_persica	Prupe.5G026500_v2.0.a1
pyrus_communis	pycom06g03220
rosa_chinensis	RchiOBHm_Chr7g0212141
rosa_laevigata	RLG00000002923
rosa_multiflora	Rmu_sc0002283.1_g000047 Rmu_sc0013167.1_g000005
rosa_roxburghii	Rroxscaffold_3G00247080
rosa_rugosa	Rorug07G0131400 Rorug07G0131500
rosa_samantha	Rh7AG264400 Rh7BG258300 Rh7CG280900 Rh7DG270800
rosa_wichuraiana	Rw7G022570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1271, 2179
AccBSI	CCGCTC	1 cut(s)	87
AccIII	TCCGGA	1 cut(s)	1636
AciI	CCGC	7 cut(s)	85, 93, 233, 330, 413, 577, 1645
AclWI	GGATC	7 cut(s)	708, 854, 1332, 1345, 1577, 2127, 2469
AcoI	YGGCCR	2 cut(s)	554, 2422
AcsI	RAATTY	6 cut(s)	62, 269, 323, 436, 1245, 1343
AcuI	CTGAAG	5 cut(s)	264, 851, 1217, 2289, 2339
AfeI	AGCGCT	1 cut(s)	686
AfiI	CCNNNNNNNGG	2 cut(s)	1271, 2179
AgsI	TTSAA	9 cut(s)	67, 692, 917, 1022, 1099, 1178, 1349, 1741, 1942
AjnI	CCWGG	4 cut(s)	874, 1264, 1600, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	1344, 1376
Alw21I	GWGCWC	4 cut(s)	654, 745, 1375, 1671
Alw26I	GTCTC	1 cut(s)	2027
AlwI	GGATC	7 cut(s)	708, 854, 1332, 1345, 1577, 2127, 2469
AlwNI	CAGNNNCTG	3 cut(s)	602, 983, 1271
Ama87I	CYCGRG	2 cut(s)	1115, 2432
Aor13HI	TCCGGA	1 cut(s)	1636
Aor51HI	AGCGCT	1 cut(s)	686
AoxI	GGCC	4 cut(s)	554, 1598, 2213, 2422
ApoI	RAATTY	6 cut(s)	62, 269, 323, 436, 1245, 1343
Asp700I	GAANNNNTTC	1 cut(s)	799
AspLEI	GCGC	3 cut(s)	133, 687, 1802
AspS9I	GGNCC	4 cut(s)	108, 1386, 1455, 2213
AsuHPI	GGTGA	6 cut(s)	185, 247, 919, 1706, 2002, 2287
AvaI	CYCGRG	2 cut(s)	1115, 2432
AvaII	GGWCC	3 cut(s)	108, 1386, 1455
AxyI	CCTNAGG	1 cut(s)	1239
BaeGI	GKGCMC	1 cut(s)	1957
BalI	TGGCCA	1 cut(s)	556
BamHI	GGATCC	1 cut(s)	1337
BanII	GRGCYC	5 cut(s)	654, 745, 875, 1264, 1671
BarI	GAAGNNNNNNTAC	4 cut(s)	1299, 1331, 2298, 2330
BauI	CACGAG	2 cut(s)	1722, 1986
Bbv12I	GWGCWC	4 cut(s)	654, 745, 1375, 1671
BccI	CCATC	8 cut(s)	171, 481, 904, 1514, 1546, 1790, 2029, 2414
BceAI	ACGGC	1 cut(s)	1362
BciT130I	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BciVI	GTATCC	1 cut(s)	304
BcoDI	GTCTC	1 cut(s)	2027
BfaI	CTAG	2 cut(s)	804, 1461
BfmI	CTRYAG	3 cut(s)	1327, 1676, 2160
BfoI	RGCGCY	2 cut(s)	688, 1803
BfuI	GTATCC	1 cut(s)	304
BglI	GCCNNNNNGGC	1 cut(s)	1227
BglII	AGATCT	1 cut(s)	1750
BlpI	GCTNAGC	1 cut(s)	648
Bme1390I	CCNGG	4 cut(s)	876, 1266, 1602, 1734
Bme18I	GGWCC	3 cut(s)	108, 1386, 1455
BmeT110I	CYCGRG	2 cut(s)	1115, 2432
BmgT120I	GGNCC	4 cut(s)	108, 1386, 1455, 2213
BmiI	GGNNCC	5 cut(s)	110, 1261, 1339, 1416, 1456
BmrFI	CCNGG	4 cut(s)	876, 1266, 1602, 1734
BmsI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
BpmI	CTGGAG	2 cut(s)	1323, 2154
Bpu10I	CCTNAGC	1 cut(s)	1290
Bpu1102I	GCTNAGC	1 cut(s)	648
BpuEI	CTTGAG	1 cut(s)	1054
Bsa29I	ATCGAT	1 cut(s)	176
BsaBI	GATNNNNATC	1 cut(s)	609
BsaJI	CCNNGG	5 cut(s)	615, 874, 1222, 1264, 2377
BsaWI	WCCGGW	2 cut(s)	1058, 1636
BsaXI	ACNNNNNCTCC	6 cut(s)	347, 377, 1027, 1057, 2076, 2106
Bsc4I	CCNNNNNNNGG	2 cut(s)	1271, 2179
Bse118I	RCCGGY	1 cut(s)	2424
Bse1I	ACTGG	5 cut(s)	207, 1276, 2137, 2216, 2475
Bse21I	CCTNAGG	1 cut(s)	1239
Bse3DI	GCAATG	2 cut(s)	896, 2336
Bse8I	GATNNNNATC	1 cut(s)	609
BseAI	TCCGGA	1 cut(s)	1636
BseBI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BseCI	ATCGAT	1 cut(s)	176
BseDI	CCNNGG	5 cut(s)	615, 874, 1222, 1264, 2377
BseGI	GGATG	5 cut(s)	471, 1525, 1645, 1957, 2425
BseJI	GATNNNNATC	1 cut(s)	609
BseLI	CCNNNNNNNGG	2 cut(s)	1271, 2179
BseMI	GCAATG	2 cut(s)	896, 2336
BseMII	CTCAG	9 cut(s)	43, 309, 639, 683, 720, 860, 1794, 1875, 1938
BseNI	ACTGG	5 cut(s)	207, 1276, 2137, 2216, 2475
BseRI	GAGGAG	1 cut(s)	79
BseSI	GKGCMC	1 cut(s)	1957
BseYI	CCCAGC	1 cut(s)	2013
BsgI	GTGCAG	1 cut(s)	2403
Bsh1285I	CGRYCG	1 cut(s)	2302
BshFI	GGCC	4 cut(s)	556, 1600, 2215, 2424
BshVI	ATCGAT	1 cut(s)	176
BsiEI	CGRYCG	1 cut(s)	2302
BsiHKAI	GWGCWC	4 cut(s)	654, 745, 1375, 1671
BsiHKCI	CYCGRG	2 cut(s)	1115, 2432
BsiSI	CCGG	3 cut(s)	1059, 1637, 2425
BslFI	GGGAC	1 cut(s)	404
BslI	CCNNNNNNNGG	2 cut(s)	1271, 2179
BsmAI	GTCTC	1 cut(s)	2027
BsmFI	GGGAC	1 cut(s)	404
BsnI	GGCC	4 cut(s)	556, 1600, 2215, 2424
BsoBI	CYCGRG	2 cut(s)	1115, 2432
Bsp1286I	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
Bsp13I	TCCGGA	1 cut(s)	1636
Bsp1720I	GCTNAGC	1 cut(s)	648
BspACI	CCGC	7 cut(s)	85, 93, 233, 330, 413, 577, 1645
BspANI	GGCC	4 cut(s)	556, 1600, 2215, 2424
BspCNI	CTCAG	9 cut(s)	42, 310, 640, 682, 721, 861, 1795, 1876, 1939
BspDI	ATCGAT	1 cut(s)	176
BspEI	TCCGGA	1 cut(s)	1636
BspHI	TCATGA	1 cut(s)	1912
BspLI	GGNNCC	5 cut(s)	110, 1261, 1339, 1416, 1456
BspPI	GGATC	7 cut(s)	708, 854, 1332, 1345, 1577, 2127, 2469
BspQI	GCTCTTC	2 cut(s)	1023, 2439
BsrBI	CCGCTC	1 cut(s)	87
BsrDI	GCAATG	2 cut(s)	896, 2336
BsrFI	RCCGGY	1 cut(s)	2424
BsrI	ACTGG	5 cut(s)	207, 1276, 2137, 2216, 2475
BssAI	RCCGGY	1 cut(s)	2424
BssECI	CCNNGG	5 cut(s)	615, 874, 1222, 1264, 2377
BssSI	CACGAG	2 cut(s)	1722, 1986
BssT1I	CCWWGG	3 cut(s)	615, 1222, 2377
Bst2BI	CACGAG	2 cut(s)	1722, 1986
Bst2UI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
Bst4CI	ACNGT	6 cut(s)	665, 716, 979, 1824, 2192, 2283
Bst6I	CTCTTC	6 cut(s)	1023, 1173, 2083, 2094, 2325, 2439
BstAPI	GCANNNNNTGC	3 cut(s)	898, 1754, 1934
BstC8I	GCNNGC	6 cut(s)	645, 840, 1375, 2140, 2169, 2426
BstEII	GGTNACC	1 cut(s)	2008
BstF5I	GGATG	5 cut(s)	471, 1525, 1645, 1957, 2425
BstH2I	RGCGCY	2 cut(s)	688, 1803
BstHHI	GCGC	3 cut(s)	133, 687, 1802
BstMAI	GTCTC	1 cut(s)	2027
BstMCI	CGRYCG	1 cut(s)	2302
BstNI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
BstNSI	RCATGY	1 cut(s)	905
BstPI	GGTNACC	1 cut(s)	2008
BstSCI	CCNGG	4 cut(s)	874, 1264, 1600, 1732
BstSFI	CTRYAG	3 cut(s)	1327, 1676, 2160
BstSLI	GKGCMC	1 cut(s)	1957
BstX2I	RGATCY	3 cut(s)	1337, 1750, 2461
BstYI	RGATCY	3 cut(s)	1337, 1750, 2461
Bsu15I	ATCGAT	1 cut(s)	176
Bsu36I	CCTNAGG	1 cut(s)	1239
BsuI	GTATCC	1 cut(s)	304
BsuRI	GGCC	4 cut(s)	556, 1600, 2215, 2424
BsuTUI	ATCGAT	1 cut(s)	176
BtsCI	GGATG	5 cut(s)	471, 1525, 1645, 1957, 2425
BtsI	GCAGTG	1 cut(s)	2149
BtsIMutI	CAGTG	2 cut(s)	753, 2149
Cac8I	GCNNGC	6 cut(s)	645, 840, 1375, 2140, 2169, 2426
CaiI	CAGNNNCTG	3 cut(s)	602, 983, 1271
CciI	TCATGA	1 cut(s)	1912
CfoI	GCGC	3 cut(s)	133, 687, 1802
Cfr10I	RCCGGY	1 cut(s)	2424
Cfr13I	GGNCC	4 cut(s)	108, 1386, 1455, 2213
ClaI	ATCGAT	1 cut(s)	176
CseI	GACGC	2 cut(s)	629, 2273
CviAII	CATG	7 cut(s)	853, 902, 1913, 1925, 2080, 2197, 2327
DraI	TTTAAA	1 cut(s)	1138
EaeI	YGGCCR	2 cut(s)	554, 2422
Eam1104I	CTCTTC	6 cut(s)	1023, 1173, 2083, 2094, 2325, 2439
EarI	CTCTTC	6 cut(s)	1023, 1173, 2083, 2094, 2325, 2439
EciI	GGCGGA	3 cut(s)	82, 345, 428
Ecl136II	GAGCTC	3 cut(s)	652, 743, 1669
Eco130I	CCWWGG	3 cut(s)	615, 1222, 2377
Eco147I	AGGCCT	1 cut(s)	1600
Eco24I	GRGCYC	5 cut(s)	654, 745, 875, 1264, 1671
Eco47I	GGWCC	3 cut(s)	108, 1386, 1455
Eco47III	AGCGCT	1 cut(s)	686
Eco53kI	GAGCTC	3 cut(s)	652, 743, 1669
Eco57I	CTGAAG	5 cut(s)	264, 851, 1217, 2289, 2339
Eco81I	CCTNAGG	1 cut(s)	1239
Eco88I	CYCGRG	2 cut(s)	1115, 2432
Eco91I	GGTNACC	1 cut(s)	2008
EcoICRI	GAGCTC	3 cut(s)	652, 743, 1669
EcoO109I	RGGNCCY	1 cut(s)	1386
EcoO65I	GGTNACC	1 cut(s)	2008
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	4 cut(s)	874, 1264, 1600, 1732
EcoT14I	CCWWGG	3 cut(s)	615, 1222, 2377
EcoT38I	GRGCYC	5 cut(s)	654, 745, 875, 1264, 1671
ErhI	CCWWGG	3 cut(s)	615, 1222, 2377
FaeI	CATG	7 cut(s)	856, 905, 1916, 1928, 2083, 2200, 2330
FalI	AAGNNNNNCTT	1 cut(s)	38
FaqI	GGGAC	1 cut(s)	404
FatI	CATG	7 cut(s)	852, 901, 1912, 1924, 2079, 2196, 2326
FauI	CCCGC	2 cut(s)	92, 1638
FokI	GGATG	5 cut(s)	478, 1532, 1652, 1944, 2432
FriOI	GRGCYC	5 cut(s)	654, 745, 875, 1264, 1671
FspBI	CTAG	2 cut(s)	804, 1461
GlaI	GCGC	3 cut(s)	132, 686, 1801
GsaI	CCCAGC	1 cut(s)	2017
GsuI	CTGGAG	2 cut(s)	1323, 2154
HaeII	RGCGCY	2 cut(s)	688, 1803
HaeIII	GGCC	4 cut(s)	556, 1600, 2215, 2424
HapII	CCGG	3 cut(s)	1059, 1637, 2425
HgaI	GACGC	2 cut(s)	629, 2273
HhaI	GCGC	3 cut(s)	133, 687, 1802
Hin1II	CATG	7 cut(s)	856, 905, 1916, 1928, 2083, 2200, 2330
Hin6I	GCGC	3 cut(s)	131, 685, 1800
HinP1I	GCGC	3 cut(s)	131, 685, 1800
HindIII	AAGCTT	1 cut(s)	15
HinfI	GANTC	8 cut(s)	214, 221, 254, 788, 1111, 1737, 1889, 2239
HpaII	CCGG	3 cut(s)	1059, 1637, 2425
HphI	GGTGA	6 cut(s)	185, 247, 919, 1706, 2002, 2287
Hpy166II	GTNNAC	5 cut(s)	712, 975, 1215, 1316, 1458
Hpy8I	GTNNAC	5 cut(s)	712, 975, 1215, 1316, 1458
HpyAV	CCTTC	8 cut(s)	63, 400, 517, 810, 818, 1162, 1469, 1831
HpyCH4III	ACNGT	6 cut(s)	665, 716, 979, 1824, 2192, 2283
HpyCH4IV	ACGT	3 cut(s)	362, 1055, 2205
HpySE526I	ACGT	3 cut(s)	362, 1055, 2205
Hsp92II	CATG	7 cut(s)	856, 905, 1916, 1928, 2083, 2200, 2330
HspAI	GCGC	3 cut(s)	131, 685, 1800
Kpn2I	TCCGGA	1 cut(s)	1636
KroI	GCCGGC	1 cut(s)	2424
KroNI	GCCGGC	1 cut(s)	2426
LguI	GCTCTTC	2 cut(s)	1023, 2439
LmnI	GCTCC	9 cut(s)	92, 583, 1035, 1171, 1259, 1420, 1666, 2022, 2135
LweI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
MaeI	CTAG	2 cut(s)	804, 1461
MaeII	ACGT	3 cut(s)	362, 1055, 2205
MaeIII	GTNAC	4 cut(s)	751, 1108, 1233, 2008
MbiI	CCGCTC	1 cut(s)	87
MfeI	CAATTG	1 cut(s)	1929
MflI	RGATCY	3 cut(s)	1337, 1750, 2461
MhlI	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
MlsI	TGGCCA	1 cut(s)	556
MluNI	TGGCCA	1 cut(s)	556
MlyI	GAGTC	3 cut(s)	1105, 1883, 2248
MmeI	TCCRAC	5 cut(s)	321, 561, 967, 1342, 1806
Mox20I	TGGCCA	1 cut(s)	556
MroI	TCCGGA	1 cut(s)	1636
MroNI	GCCGGC	1 cut(s)	2424
MroXI	GAANNNNTTC	1 cut(s)	799
MscI	TGGCCA	1 cut(s)	556
MseI	TTAA	7 cut(s)	264, 1128, 1137, 1710, 1782, 2285, 2476
MslI	CAYNNNNRTG	1 cut(s)	1917
Msp20I	TGGCCA	1 cut(s)	556
MspI	CCGG	3 cut(s)	1059, 1637, 2425
MspR9I	CCNGG	4 cut(s)	876, 1266, 1602, 1734
MunI	CAATTG	1 cut(s)	1929
MvaI	CCWGG	4 cut(s)	876, 1266, 1602, 1734
NaeI	GCCGGC	1 cut(s)	2426
NgoMIV	GCCGGC	1 cut(s)	2424
NlaIII	CATG	7 cut(s)	856, 905, 1916, 1928, 2083, 2200, 2330
NlaIV	GGNNCC	5 cut(s)	110, 1261, 1339, 1416, 1456
NmuCI	GTSAC	3 cut(s)	751, 1108, 2008
NspI	RCATGY	1 cut(s)	905
PagI	TCATGA	1 cut(s)	1912
PceI	AGGCCT	1 cut(s)	1600
PciSI	GCTCTTC	2 cut(s)	1023, 2439
PdiI	GCCGGC	1 cut(s)	2426
PdmI	GAANNNNTTC	1 cut(s)	799
PfeI	GAWTC	5 cut(s)	214, 221, 254, 788, 1737
PflMI	CCANNNNNTGG	2 cut(s)	1271, 2179
Ple19I	CGATCG	1 cut(s)	2302
PleI	GAGTC	3 cut(s)	1105, 1883, 2247
PpsI	GAGTC	3 cut(s)	1105, 1883, 2247
PpuMI	RGGWCCY	1 cut(s)	1386
Psp124BI	GAGCTC	3 cut(s)	654, 745, 1671
Psp5II	RGGWCCY	1 cut(s)	1386
Psp6I	CCWGG	4 cut(s)	874, 1264, 1600, 1732
PspEI	GGTNACC	1 cut(s)	2008
PspFI	CCCAGC	1 cut(s)	2013
PspGI	CCWGG	4 cut(s)	874, 1264, 1600, 1732
PspN4I	GGNNCC	5 cut(s)	110, 1261, 1339, 1416, 1456
PspPI	GGNCC	4 cut(s)	108, 1386, 1455, 2213
PspPPI	RGGWCCY	1 cut(s)	1386
PstNI	CAGNNNCTG	3 cut(s)	602, 983, 1271
PsuI	RGATCY	3 cut(s)	1337, 1750, 2461
PvuI	CGATCG	1 cut(s)	2302
RseI	CAYNNNNRTG	1 cut(s)	1917
SacI	GAGCTC	3 cut(s)	654, 745, 1671
SapI	GCTCTTC	2 cut(s)	1023, 2439
SaqAI	TTAA	7 cut(s)	264, 1128, 1137, 1710, 1782, 2285, 2476
Sau96I	GGNCC	4 cut(s)	108, 1386, 1455, 2213
SchI	GAGTC	3 cut(s)	1105, 1883, 2248
ScrFI	CCNGG	4 cut(s)	876, 1266, 1602, 1734
SduI	GDGCHC	7 cut(s)	654, 745, 875, 1264, 1375, 1671, 1957
SfaNI	GCATC	8 cut(s)	456, 595, 748, 851, 1150, 1431, 1435, 1507
SfcI	CTRYAG	3 cut(s)	1327, 1676, 2160
SinI	GGWCC	3 cut(s)	108, 1386, 1455
SmiMI	CAYNNNNRTG	1 cut(s)	1917
SmlI	CTYRAG	1 cut(s)	1069
SmoI	CTYRAG	1 cut(s)	1069
SseBI	AGGCCT	1 cut(s)	1600
SsiI	CCGC	7 cut(s)	85, 93, 233, 330, 413, 577, 1645
SspI	AATATT	1 cut(s)	1771
SspMI	CTAG	2 cut(s)	804, 1461
SstI	GAGCTC	3 cut(s)	654, 745, 1671
StuI	AGGCCT	1 cut(s)	1600
StyD4I	CCNGG	4 cut(s)	874, 1264, 1600, 1732
StyI	CCWWGG	3 cut(s)	615, 1222, 2377
TaaI	ACNGT	6 cut(s)	665, 716, 979, 1824, 2192, 2283
TaiI	ACGT	3 cut(s)	365, 1058, 2208
TaqI	TCGA	6 cut(s)	176, 249, 257, 521, 739, 1892
TatI	WGTACW	2 cut(s)	1026, 2467
TfiI	GAWTC	5 cut(s)	214, 221, 254, 788, 1737
Tru1I	TTAA	7 cut(s)	264, 1128, 1137, 1710, 1782, 2285, 2476
Tru9I	TTAA	7 cut(s)	264, 1128, 1137, 1710, 1782, 2285, 2476
TscAI	CASTG	2 cut(s)	760, 2149
TseFI	GTSAC	3 cut(s)	751, 1108, 2008
Tsp45I	GTSAC	3 cut(s)	751, 1108, 2008
TspDTI	ATGAA	6 cut(s)	282, 1452, 1867, 1929, 2210, 2343
TspGWI	ACGGA	2 cut(s)	408, 434
TspRI	CASTG	2 cut(s)	760, 2149
Van91I	CCANNNNNTGG	2 cut(s)	1271, 2179
VpaK11BI	GGWCC	3 cut(s)	108, 1386, 1455
XapI	RAATTY	6 cut(s)	62, 269, 323, 436, 1245, 1343
XceI	RCATGY	1 cut(s)	905
XmnI	GAANNNNTTC	1 cut(s)	799
XspI	CTAG	2 cut(s)	804, 1461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.