Protein of unknown function, DUF547
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21060 AT1G21060 AT1G76620 AT1G76620 |
| fragaria_vesca | FvH4_5g26610 FvH4_5g26610 |
| malus_domestica | MD06G1001000.v1.1 |
| prunus_persica | Prupe.5G001300_v2.0.a1 Prupe.5G001300_v2.0.a1 Prupe.5G001300_v2.0.a1 Prupe.5G001300_v2.0.a1 Prupe.5G001300_v2.0.a1 |
| pyrus_communis | pycom06g00020 |
| rosa_chinensis | RchiOBHm_Chr7g0217551 |
| rosa_laevigata | RLG00000002462 |
| rosa_multiflora | Rmu_co8121272.1_g000001 Rmu_co8214236.1_g000001 Rmu_sc0004631.1_g000001 Rmu_sc0006161.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00241880 |
| rosa_rugosa | Rorug07G0169700 Rorug07G0169700 Rorug07G0169800 |
| rosa_samantha | Rh7AG309700 Rh7BG300800 Rh7CG328900 Rh7DG309300 |
| rosa_wichuraiana | Rw7G026270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 620 |
| Acc16I | TGCGCA | 1 cut(s) | 90 |
| Acc36I | ACCTGC | 2 cut(s) | 2256, 2726 |
| AccB1I | GGYRCC | 2 cut(s) | 2403, 2470 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1870, 2328 |
| AccBSI | CCGCTC | 1 cut(s) | 1882 |
| AccI | GTMKAC | 2 cut(s) | 412, 1338 |
| AccIII | TCCGGA | 1 cut(s) | 595 |
| AclI | AACGTT | 1 cut(s) | 2462 |
| AclWI | GGATC | 4 cut(s) | 561, 1305, 2649, 2662 |
| AcsI | RAATTY | 7 cut(s) | 359, 886, 1110, 1153, 1319, 1374, 1452 |
| AcuI | CTGAAG | 4 cut(s) | 162, 630, 950, 2273 |
| AcyI | GRCGYC | 1 cut(s) | 2471 |
| AfaI | GTAC | 8 cut(s) | 316, 333, 366, 1033, 1385, 1506, 1853, 2091 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1680, 1870, 2328 |
| AflII | CTTAAG | 1 cut(s) | 1885 |
| AflIII | ACRYGT | 2 cut(s) | 1398, 2581 |
| AgeI | ACCGGT | 1 cut(s) | 415 |
| AgsI | TTSAA | 6 cut(s) | 793, 835, 1038, 1171, 1328, 1457 |
| AjiI | CACGTC | 1 cut(s) | 2501 |
| AjnI | CCWGG | 5 cut(s) | 114, 1293, 2116, 2466, 2657 |
| AleI | CACNNNNGTG | 1 cut(s) | 474 |
| Alw21I | GWGCWC | 3 cut(s) | 1100, 1120, 1878 |
| Alw26I | GTCTC | 7 cut(s) | 60, 1448, 1653, 1808, 1888, 1921, 2603 |
| AlwI | GGATC | 4 cut(s) | 561, 1305, 2649, 2662 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1300 |
| Ama87I | CYCGRG | 2 cut(s) | 1786, 1941 |
| Aor13HI | TCCGGA | 1 cut(s) | 595 |
| AoxI | GGCC | 1 cut(s) | 1536 |
| ApoI | RAATTY | 7 cut(s) | 359, 886, 1110, 1153, 1319, 1374, 1452 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1385, 1417, 2285, 2317 |
| AseI | ATTAAT | 1 cut(s) | 966 |
| AsiGI | ACCGGT | 1 cut(s) | 415 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1323 |
| AspLEI | GCGC | 3 cut(s) | 91, 2224, 2473 |
| AspS9I | GGNCC | 7 cut(s) | 112, 418, 508, 806, 1222, 1536, 2293 |
| AsuC2I | CCSGG | 1 cut(s) | 1243 |
| AsuHPI | GGTGA | 3 cut(s) | 997, 2417, 2486 |
| AsuII | TTCGAA | 2 cut(s) | 725, 904 |
| AvaI | CYCGRG | 2 cut(s) | 1786, 1941 |
| AvaII | GGWCC | 6 cut(s) | 112, 418, 508, 806, 1222, 2293 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1344, 1377 |
| BamHI | GGATCC | 1 cut(s) | 2654 |
| BanI | GGYRCC | 2 cut(s) | 2403, 2470 |
| BanII | GRGCYC | 1 cut(s) | 1100 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 706, 738, 1037, 1069, 1178, 1210 |
| BauI | CACGAG | 1 cut(s) | 1891 |
| Bbv12I | GWGCWC | 3 cut(s) | 1100, 1120, 1878 |
| BccI | CCATC | 5 cut(s) | 273, 1604, 1759, 2383, 2442 |
| BceAI | ACGGC | 1 cut(s) | 2426 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 392, 426 |
| BciT130I | CCWGG | 5 cut(s) | 116, 1295, 2118, 2468, 2659 |
| BclI | TGATCA | 1 cut(s) | 2050 |
| BcnI | CCSGG | 1 cut(s) | 1243 |
| BcoDI | GTCTC | 7 cut(s) | 60, 1448, 1653, 1808, 1888, 1921, 2603 |
| BfaI | CTAG | 6 cut(s) | 483, 1202, 1311, 1967, 2067, 2145 |
| BfmI | CTRYAG | 1 cut(s) | 1471 |
| BfoI | RGCGCY | 1 cut(s) | 2474 |
| BfrI | CTTAAG | 1 cut(s) | 1885 |
| BfuAI | ACCTGC | 2 cut(s) | 2256, 2726 |
| BglII | AGATCT | 1 cut(s) | 1994 |
| BmcAI | AGTACT | 2 cut(s) | 1033, 1385 |
| Bme1390I | CCNGG | 6 cut(s) | 116, 1243, 1295, 2118, 2468, 2659 |
| Bme18I | GGWCC | 6 cut(s) | 112, 418, 508, 806, 1222, 2293 |
| BmeT110I | CYCGRG | 2 cut(s) | 1786, 1941 |
| BmgBI | CACGTC | 1 cut(s) | 2501 |
| BmgT120I | GGNCC | 7 cut(s) | 112, 418, 508, 806, 1222, 1536, 2293 |
| BmiI | GGNNCC | 6 cut(s) | 509, 1672, 2333, 2405, 2472, 2656 |
| BmrFI | CCNGG | 6 cut(s) | 116, 1243, 1295, 2118, 2468, 2659 |
| BmsI | GCATC | 7 cut(s) | 614, 636, 978, 1419, 1997, 2461, 2530 |
| BpmI | CTGGAG | 2 cut(s) | 236, 1400 |
| Bpu10I | CCTNAGC | 2 cut(s) | 666, 1212 |
| Bpu14I | TTCGAA | 2 cut(s) | 725, 904 |
| BpuEI | CTTGAG | 5 cut(s) | 257, 263, 645, 694, 932 |
| BpuMI | CCSGG | 1 cut(s) | 1243 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2152 |
| BsaHI | GRCGYC | 1 cut(s) | 2471 |
| BsaI | GGTCTC | 2 cut(s) | 1808, 1888 |
| BsaJI | CCNNGG | 8 cut(s) | 295, 547, 981, 1133, 1242, 1414, 1940, 2399 |
| BsaWI | WCCGGW | 2 cut(s) | 415, 595 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1563, 1593, 1882, 1912, 2303, 2333, 2373, 2403 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1680, 1870, 2328 |
| Bse118I | RCCGGY | 2 cut(s) | 415, 2168 |
| Bse1I | ACTGG | 3 cut(s) | 1224, 1332, 2296 |
| Bse3DI | GCAATG | 1 cut(s) | 2516 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2152 |
| BseAI | TCCGGA | 1 cut(s) | 595 |
| BseBI | CCWGG | 5 cut(s) | 116, 1295, 2118, 2468, 2659 |
| BseDI | CCNNGG | 8 cut(s) | 295, 547, 981, 1133, 1242, 1414, 1940, 2399 |
| BseGI | GGATG | 5 cut(s) | 305, 1410, 2007, 2434, 2452 |
| BseJI | GATNNNNATC | 1 cut(s) | 2152 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1680, 1870, 2328 |
| BseMI | GCAATG | 1 cut(s) | 2516 |
| BseMII | CTCAG | 8 cut(s) | 23, 140, 474, 680, 1203, 1461, 1619, 1841 |
| BseNI | ACTGG | 3 cut(s) | 1224, 1332, 2296 |
| BseRI | GAGGAG | 7 cut(s) | 233, 236, 959, 1584, 2324, 2327, 2381 |
| BseYI | CCCAGC | 3 cut(s) | 1258, 1979, 2280 |
| Bsh1285I | CGRYCG | 4 cut(s) | 416, 1641, 2166, 2194 |
| BshFI | GGCC | 1 cut(s) | 1538 |
| BshNI | GGYRCC | 2 cut(s) | 2403, 2470 |
| BshTI | ACCGGT | 1 cut(s) | 415 |
| BsiEI | CGRYCG | 4 cut(s) | 416, 1641, 2166, 2194 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1100, 1120, 1878 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1786, 1941 |
| BsiSI | CCGG | 6 cut(s) | 416, 596, 1242, 1539, 1681, 2169 |
| BslFI | GGGAC | 1 cut(s) | 521 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1680, 1870, 2328 |
| BsmAI | GTCTC | 7 cut(s) | 60, 1448, 1653, 1808, 1888, 1921, 2603 |
| BsmBI | CGTCTC | 2 cut(s) | 1653, 1921 |
| BsmFI | GGGAC | 1 cut(s) | 521 |
| BsmI | GAATGC | 2 cut(s) | 956, 995 |
| BsnI | GGCC | 1 cut(s) | 1538 |
| Bso31I | GGTCTC | 2 cut(s) | 1808, 1888 |
| BsoBI | CYCGRG | 2 cut(s) | 1786, 1941 |
| Bsp119I | TTCGAA | 2 cut(s) | 725, 904 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1100, 1120, 1878 |
| Bsp13I | TCCGGA | 1 cut(s) | 595 |
| Bsp1407I | TGTACA | 4 cut(s) | 331, 364, 1504, 1851 |
| Bsp19I | CCATGG | 2 cut(s) | 1133, 1414 |
| BspANI | GGCC | 1 cut(s) | 1538 |
| BspCNI | CTCAG | 8 cut(s) | 22, 141, 473, 679, 1204, 1460, 1620, 1840 |
| BspEI | TCCGGA | 1 cut(s) | 595 |
| BspHI | TCATGA | 2 cut(s) | 781, 2605 |
| BspLI | GGNNCC | 6 cut(s) | 509, 1672, 2333, 2405, 2472, 2656 |
| BspMAI | CTGCAG | 1 cut(s) | 1475 |
| BspMI | ACCTGC | 2 cut(s) | 2256, 2726 |
| BspPI | GGATC | 4 cut(s) | 561, 1305, 2649, 2662 |
| BspT104I | TTCGAA | 2 cut(s) | 725, 904 |
| BspT107I | GGYRCC | 2 cut(s) | 2403, 2470 |
| BspTI | CTTAAG | 1 cut(s) | 1885 |
| BspTNI | GGTCTC | 2 cut(s) | 1808, 1888 |
| BsrBI | CCGCTC | 1 cut(s) | 1882 |
| BsrDI | GCAATG | 1 cut(s) | 2516 |
| BsrFI | RCCGGY | 2 cut(s) | 415, 2168 |
| BsrGI | TGTACA | 4 cut(s) | 331, 364, 1504, 1851 |
| BsrI | ACTGG | 3 cut(s) | 1224, 1332, 2296 |
| BssAI | RCCGGY | 2 cut(s) | 415, 2168 |
| BssECI | CCNNGG | 8 cut(s) | 295, 547, 981, 1133, 1242, 1414, 1940, 2399 |
| BssNI | GRCGYC | 1 cut(s) | 2471 |
| BssSI | CACGAG | 1 cut(s) | 1891 |
| BssT1I | CCWWGG | 5 cut(s) | 295, 547, 981, 1133, 1414 |
| Bst2BI | CACGAG | 1 cut(s) | 1891 |
| Bst2UI | CCWGG | 5 cut(s) | 116, 1295, 2118, 2468, 2659 |
| Bst4CI | ACNGT | 6 cut(s) | 354, 1562, 1915, 2107, 2630, 2757 |
| Bst6I | CTCTTC | 5 cut(s) | 175, 637, 1309, 2071, 2515 |
| BstACI | GRCGYC | 1 cut(s) | 2471 |
| BstAFI | CTTAAG | 1 cut(s) | 1885 |
| BstAUI | TGTACA | 4 cut(s) | 331, 364, 1504, 1851 |
| BstBI | TTCGAA | 2 cut(s) | 725, 904 |
| BstC8I | GCNNGC | 4 cut(s) | 954, 993, 2101, 2178 |
| BstDSI | CCRYGG | 2 cut(s) | 1133, 1414 |
| BstF5I | GGATG | 5 cut(s) | 305, 1410, 2007, 2434, 2452 |
| BstH2I | RGCGCY | 1 cut(s) | 2474 |
| BstHHI | GCGC | 3 cut(s) | 91, 2224, 2473 |
| BstMAI | GTCTC | 7 cut(s) | 60, 1448, 1653, 1808, 1888, 1921, 2603 |
| BstMCI | CGRYCG | 4 cut(s) | 416, 1641, 2166, 2194 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 543, 662, 671, 1001, 1268, 1277, 2122, 2182, 2410 |
| BstNI | CCWGG | 5 cut(s) | 116, 1295, 2118, 2468, 2659 |
| BstNSI | RCATGY | 3 cut(s) | 995, 1402, 2585 |
| BstSCI | CCNGG | 6 cut(s) | 114, 1241, 1293, 2116, 2466, 2657 |
| BstSFI | CTRYAG | 1 cut(s) | 1471 |
| BstX2I | RGATCY | 3 cut(s) | 1297, 1994, 2654 |
| BstYI | RGATCY | 3 cut(s) | 1297, 1994, 2654 |
| BsuRI | GGCC | 1 cut(s) | 1538 |
| BtgI | CCRYGG | 2 cut(s) | 1133, 1414 |
| BtgZI | GCGATG | 1 cut(s) | 518 |
| BtrI | CACGTC | 1 cut(s) | 2501 |
| BtsCI | GGATG | 5 cut(s) | 305, 1410, 2007, 2434, 2452 |
| BtsI | GCAGTG | 1 cut(s) | 481 |
| BtsIMutI | CAGTG | 7 cut(s) | 146, 481, 766, 1217, 1339, 2103, 2626 |
| BveI | ACCTGC | 2 cut(s) | 2256, 2726 |
| Cac8I | GCNNGC | 4 cut(s) | 954, 993, 2101, 2178 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1300 |
| CciI | TCATGA | 2 cut(s) | 781, 2605 |
| CfoI | GCGC | 3 cut(s) | 91, 2224, 2473 |
| Cfr10I | RCCGGY | 2 cut(s) | 415, 2168 |
| Cfr13I | GGNCC | 7 cut(s) | 112, 418, 508, 806, 1222, 1536, 2293 |
| CseI | GACGC | 1 cut(s) | 1670 |
| Csp6I | GTAC | 8 cut(s) | 315, 332, 365, 1032, 1384, 1505, 1852, 2090 |
| CspAI | ACCGGT | 1 cut(s) | 415 |
| CviQI | GTAC | 8 cut(s) | 315, 332, 365, 1032, 1384, 1505, 1852, 2090 |
| DinI | GGCGCC | 1 cut(s) | 2472 |
| Eam1104I | CTCTTC | 5 cut(s) | 175, 637, 1309, 2071, 2515 |
| EarI | CTCTTC | 5 cut(s) | 175, 637, 1309, 2071, 2515 |
| EciI | GGCGGA | 1 cut(s) | 1890 |
| Ecl136II | GAGCTC | 1 cut(s) | 1098 |
| Eco130I | CCWWGG | 5 cut(s) | 295, 547, 981, 1133, 1414 |
| Eco24I | GRGCYC | 1 cut(s) | 1100 |
| Eco31I | GGTCTC | 2 cut(s) | 1808, 1888 |
| Eco47I | GGWCC | 6 cut(s) | 112, 418, 508, 806, 1222, 2293 |
| Eco53kI | GAGCTC | 1 cut(s) | 1098 |
| Eco57I | CTGAAG | 4 cut(s) | 162, 630, 950, 2273 |
| Eco88I | CYCGRG | 2 cut(s) | 1786, 1941 |
| EcoICRI | GAGCTC | 1 cut(s) | 1098 |
| EcoRI | GAATTC | 2 cut(s) | 1110, 1153 |
| EcoRII | CCWGG | 5 cut(s) | 114, 1293, 2116, 2466, 2657 |
| EcoT14I | CCWWGG | 5 cut(s) | 295, 547, 981, 1133, 1414 |
| EcoT22I | ATGCAT | 3 cut(s) | 629, 993, 997 |
| EcoT38I | GRGCYC | 1 cut(s) | 1100 |
| EgeI | GGCGCC | 1 cut(s) | 2472 |
| EheI | GGCGCC | 1 cut(s) | 2472 |
| ErhI | CCWWGG | 5 cut(s) | 295, 547, 981, 1133, 1414 |
| Esp3I | CGTCTC | 2 cut(s) | 1653, 1921 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 827, 859, 1513, 1545 |
| FaqI | GGGAC | 1 cut(s) | 521 |
| FauI | CCCGC | 4 cut(s) | 1660, 1887, 2457, 2483 |
| FauNDI | CATATG | 2 cut(s) | 2112, 2714 |
| FbaI | TGATCA | 1 cut(s) | 2050 |
| FblI | GTMKAC | 2 cut(s) | 412, 1338 |
| FokI | GGATG | 5 cut(s) | 312, 1397, 1994, 2421, 2439 |
| FriOI | GRGCYC | 1 cut(s) | 1100 |
| FspBI | CTAG | 6 cut(s) | 483, 1202, 1311, 1967, 2067, 2145 |
| FspI | TGCGCA | 1 cut(s) | 90 |
| GlaI | GCGC | 3 cut(s) | 90, 2223, 2472 |
| GsaI | CCCAGC | 3 cut(s) | 1262, 1983, 2284 |
| GsuI | CTGGAG | 2 cut(s) | 236, 1400 |
| HaeII | RGCGCY | 1 cut(s) | 2474 |
| HaeIII | GGCC | 1 cut(s) | 1538 |
| HapII | CCGG | 6 cut(s) | 416, 596, 1242, 1539, 1681, 2169 |
| HgaI | GACGC | 1 cut(s) | 1670 |
| HhaI | GCGC | 3 cut(s) | 91, 2224, 2473 |
| Hin1I | GRCGYC | 1 cut(s) | 2471 |
| Hin6I | GCGC | 3 cut(s) | 89, 2222, 2471 |
| HinP1I | GCGC | 3 cut(s) | 89, 2222, 2471 |
| HincII | GTYRAC | 2 cut(s) | 413, 2504 |
| HindII | GTYRAC | 2 cut(s) | 413, 2504 |
| HindIII | AAGCTT | 2 cut(s) | 856, 950 |
| HinfI | GANTC | 8 cut(s) | 524, 730, 748, 767, 1419, 1649, 2129, 2240 |
| HpaII | CCGG | 6 cut(s) | 416, 596, 1242, 1539, 1681, 2169 |
| HphI | GGTGA | 3 cut(s) | 997, 2417, 2486 |
| Hpy166II | GTNNAC | 7 cut(s) | 413, 752, 1225, 1339, 1363, 2504, 2780 |
| Hpy8I | GTNNAC | 7 cut(s) | 413, 752, 1225, 1339, 1363, 2504, 2780 |
| Hpy99I | CGWCG | 1 cut(s) | 2412 |
| HpyAV | CCTTC | 9 cut(s) | 779, 910, 1039, 1477, 2265, 2311, 2377, 2405, 2673 |
| HpyCH4III | ACNGT | 6 cut(s) | 354, 1562, 1915, 2107, 2630, 2757 |
| HpyCH4IV | ACGT | 3 cut(s) | 379, 2462, 2500 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 543, 662, 671, 1001, 1268, 1277, 2122, 2182, 2410 |
| HpySE526I | ACGT | 3 cut(s) | 379, 2462, 2500 |
| Hsp92I | GRCGYC | 1 cut(s) | 2471 |
| HspAI | GCGC | 3 cut(s) | 89, 2222, 2471 |
| KasI | GGCGCC | 1 cut(s) | 2470 |
| Kpn2I | TCCGGA | 1 cut(s) | 595 |
| Ksp22I | TGATCA | 1 cut(s) | 2050 |
| LmnI | GCTCC | 5 cut(s) | 1103, 1179, 1881, 2056, 2337 |
| LweI | GCATC | 7 cut(s) | 614, 636, 978, 1419, 1997, 2461, 2530 |
| MaeI | CTAG | 6 cut(s) | 483, 1202, 1311, 1967, 2067, 2145 |
| MaeII | ACGT | 3 cut(s) | 379, 2462, 2500 |
| MaeIII | GTNAC | 2 cut(s) | 1401, 1562 |
| MbiI | CCGCTC | 1 cut(s) | 1882 |
| MfeI | CAATTG | 1 cut(s) | 1038 |
| MflI | RGATCY | 3 cut(s) | 1297, 1994, 2654 |
| MhlI | GDGCHC | 3 cut(s) | 1100, 1120, 1878 |
| Mly113I | GGCGCC | 1 cut(s) | 2471 |
| MlyI | GAGTC | 3 cut(s) | 757, 1413, 2123 |
| MmeI | TCCRAC | 3 cut(s) | 75, 215, 2346 |
| Mph1103I | ATGCAT | 3 cut(s) | 629, 993, 997 |
| MroI | TCCGGA | 1 cut(s) | 595 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1323 |
| MseI | TTAA | 5 cut(s) | 78, 861, 966, 1886, 2232 |
| MslI | CAYNNNNRTG | 5 cut(s) | 474, 561, 759, 818, 2631 |
| MspA1I | CMGCKG | 4 cut(s) | 1262, 1476, 1667, 2125 |
| MspCI | CTTAAG | 1 cut(s) | 1885 |
| MspI | CCGG | 6 cut(s) | 416, 596, 1242, 1539, 1681, 2169 |
| MspR9I | CCNGG | 6 cut(s) | 116, 1243, 1295, 2118, 2468, 2659 |
| MunI | CAATTG | 1 cut(s) | 1038 |
| Mva1269I | GAATGC | 2 cut(s) | 956, 995 |
| MvaI | CCWGG | 5 cut(s) | 116, 1295, 2118, 2468, 2659 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 543, 662, 671, 1001, 1268, 1277, 2122, 2182, 2410 |
| NarI | GGCGCC | 1 cut(s) | 2471 |
| NciI | CCSGG | 1 cut(s) | 1243 |
| NcoI | CCATGG | 2 cut(s) | 1133, 1414 |
| NdeI | CATATG | 2 cut(s) | 2112, 2714 |
| NlaIV | GGNNCC | 6 cut(s) | 509, 1672, 2333, 2405, 2472, 2656 |
| NmeAIII | GCCGAG | 2 cut(s) | 1964, 2380 |
| NmuCI | GTSAC | 2 cut(s) | 1401, 1562 |
| NsbI | TGCGCA | 1 cut(s) | 90 |
| NsiI | ATGCAT | 3 cut(s) | 629, 993, 997 |
| NspI | RCATGY | 3 cut(s) | 995, 1402, 2585 |
| NspV | TTCGAA | 2 cut(s) | 725, 904 |
| OliI | CACNNNNGTG | 1 cut(s) | 474 |
| PaeI | GCATGC | 1 cut(s) | 995 |
| PagI | TCATGA | 2 cut(s) | 781, 2605 |
| PciI | ACATGT | 2 cut(s) | 1398, 2581 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 731 |
| PctI | GAATGC | 2 cut(s) | 956, 995 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1323 |
| PfeI | GAWTC | 5 cut(s) | 524, 730, 767, 1649, 2240 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1870, 2328 |
| PfoI | TCCNGGA | 1 cut(s) | 1293 |
| PinAI | ACCGGT | 1 cut(s) | 415 |
| Ple19I | CGATCG | 2 cut(s) | 2166, 2194 |
| PleI | GAGTC | 3 cut(s) | 756, 1413, 2123 |
| PluTI | GGCGCC | 1 cut(s) | 2474 |
| PpsI | GAGTC | 3 cut(s) | 756, 1413, 2123 |
| PscI | ACATGT | 2 cut(s) | 1398, 2581 |
| PshBI | ATTAAT | 1 cut(s) | 966 |
| PsiI | TTATAA | 1 cut(s) | 620 |
| Psp124BI | GAGCTC | 1 cut(s) | 1100 |
| Psp1406I | AACGTT | 1 cut(s) | 2462 |
| Psp6I | CCWGG | 5 cut(s) | 114, 1293, 2116, 2466, 2657 |
| PspFI | CCCAGC | 3 cut(s) | 1258, 1979, 2280 |
| PspGI | CCWGG | 5 cut(s) | 114, 1293, 2116, 2466, 2657 |
| PspN4I | GGNNCC | 6 cut(s) | 509, 1672, 2333, 2405, 2472, 2656 |
| PspPI | GGNCC | 7 cut(s) | 112, 418, 508, 806, 1222, 1536, 2293 |
| PstI | CTGCAG | 1 cut(s) | 1475 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1300 |
| PsuI | RGATCY | 3 cut(s) | 1297, 1994, 2654 |
| PvuI | CGATCG | 2 cut(s) | 2166, 2194 |
| PvuII | CAGCTG | 2 cut(s) | 1476, 2125 |
| RsaI | GTAC | 8 cut(s) | 316, 333, 366, 1033, 1385, 1506, 1853, 2091 |
| RsaNI | GTAC | 8 cut(s) | 315, 332, 365, 1032, 1384, 1505, 1852, 2090 |
| RseI | CAYNNNNRTG | 5 cut(s) | 474, 561, 759, 818, 2631 |
| SacI | GAGCTC | 1 cut(s) | 1100 |
| SalI | GTCGAC | 1 cut(s) | 411 |
| SaqAI | TTAA | 5 cut(s) | 78, 861, 966, 1886, 2232 |
| Sau96I | GGNCC | 7 cut(s) | 112, 418, 508, 806, 1222, 1536, 2293 |
| ScaI | AGTACT | 2 cut(s) | 1033, 1385 |
| SchI | GAGTC | 3 cut(s) | 757, 1413, 2123 |
| ScrFI | CCNGG | 6 cut(s) | 116, 1243, 1295, 2118, 2468, 2659 |
| SduI | GDGCHC | 3 cut(s) | 1100, 1120, 1878 |
| SfaNI | GCATC | 7 cut(s) | 614, 636, 978, 1419, 1997, 2461, 2530 |
| SfcI | CTRYAG | 1 cut(s) | 1471 |
| SfoI | GGCGCC | 1 cut(s) | 2472 |
| SfuI | TTCGAA | 2 cut(s) | 725, 904 |
| SinI | GGWCC | 6 cut(s) | 112, 418, 508, 806, 1222, 2293 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 474, 561, 759, 818, 2631 |
| SmlI | CTYRAG | 6 cut(s) | 236, 242, 660, 709, 911, 1885 |
| SmoI | CTYRAG | 6 cut(s) | 236, 242, 660, 709, 911, 1885 |
| SphI | GCATGC | 1 cut(s) | 995 |
| SspDI | GGCGCC | 1 cut(s) | 2470 |
| SspI | AATATT | 1 cut(s) | 970 |
| SspMI | CTAG | 6 cut(s) | 483, 1202, 1311, 1967, 2067, 2145 |
| SstI | GAGCTC | 1 cut(s) | 1100 |
| StyD4I | CCNGG | 6 cut(s) | 114, 1241, 1293, 2116, 2466, 2657 |
| StyI | CCWWGG | 5 cut(s) | 295, 547, 981, 1133, 1414 |
| TaaI | ACNGT | 6 cut(s) | 354, 1562, 1915, 2107, 2630, 2757 |
| TaiI | ACGT | 3 cut(s) | 382, 2465, 2503 |
| TaqII | GACCGA | 2 cut(s) | 1627, 1830 |
| TatI | WGTACW | 6 cut(s) | 331, 364, 1031, 1383, 1504, 1851 |
| TauI | GCSGC | 4 cut(s) | 656, 1554, 2199, 2539 |
| TfiI | GAWTC | 5 cut(s) | 524, 730, 767, 1649, 2240 |
| Tru1I | TTAA | 5 cut(s) | 78, 861, 966, 1886, 2232 |
| Tru9I | TTAA | 5 cut(s) | 78, 861, 966, 1886, 2232 |
| TscAI | CASTG | 7 cut(s) | 153, 481, 766, 1224, 1339, 2110, 2633 |
| TseFI | GTSAC | 2 cut(s) | 1401, 1562 |
| Tsp45I | GTSAC | 2 cut(s) | 1401, 1562 |
| TspGWI | ACGGA | 4 cut(s) | 723, 1023, 1581, 2054 |
| TspRI | CASTG | 7 cut(s) | 153, 481, 766, 1224, 1339, 2110, 2633 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1870, 2328 |
| Vha464I | CTTAAG | 1 cut(s) | 1885 |
| VpaK11BI | GGWCC | 6 cut(s) | 112, 418, 508, 806, 1222, 2293 |
| VspI | ATTAAT | 1 cut(s) | 966 |
| XapI | RAATTY | 7 cut(s) | 359, 886, 1110, 1153, 1319, 1374, 1452 |
| XbaI | TCTAGA | 1 cut(s) | 2144 |
| XceI | RCATGY | 3 cut(s) | 995, 1402, 2585 |
| XmiI | GTMKAC | 2 cut(s) | 412, 1338 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1323 |
| XspI | CTAG | 6 cut(s) | 483, 1202, 1311, 1967, 2067, 2145 |
| ZrmI | AGTACT | 2 cut(s) | 1033, 1385 |
| Zsp2I | ATGCAT | 3 cut(s) | 629, 993, 997 |