Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0013167

Physical Location & Seq

Genomic Coordinates Forward (+)

20211774 .. 20222411

Gene Structure 10638 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g29150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGTCGCAGTCGCTGGAGCTTTTGCTGATACAGTTCCTGATGCCGGACAACGACGCCCGGCGGCAAGCGGAGGACCAGATTAAGCGGCTGGCTAAGGACCCTCAGGTGGTCCCCGCTCTCGTTCAGCACCTCCGCACCGCCAAGACTCCCAACGTCCGCCAACTCGCCGCCGTTCTTCTCCGCAAGAAGATCACCGGCCACTGGGCCAAGCTCTCTCCTCAGCTCAAGAACCTCGTCAAGCAGTCCCTCATTGAGAGCATCACCATGGAGCACAGTCCTCCGGTGCGGCGAGCCAGTGCCAATGTAGTTAGTGTGGTTGCAAAATATGCTGTCCCAGCCGGAGAATGGCCCGACTTGTTGCCATTTCTGTTCCAATGTAGTCAGAGTGCGCAGGAAGAACATAGAGAGGTGGCATTGATCCTTTTCAGCTCTTTGACTGAAACAATTGGGAATACGTTTCGACCACATTTCGCAGATTTGCAAGCTTTACTTCTGAAATGCTTGCAGGATGAGACTAGCAACCGTGTCAGAGTTGCTGCACTCAAGGCAGTGGGGTCTTTTCTAGAATTCACTCATGATGGGACCGAAGTGGTCAAATTTCGAGAATTCATTCCCAGCATTTTAAATGTATCAAGACAGTGCCTTGCTGCTGGCGAAGAGGATGTTGCTGTAATTGCTTTTGAGATTTTTGACGAGCTGATTGAATCTCCTGCACCTCTTCTTGGGGAGTCTATTAAATCCATTGTGCAGTTCTCTCTCGAAGTTTGCTCAAGTCAAACTTTGGAGTCTAACACACGTCATCAGGCAGTCCAAATAATCTCATGGCTGGCAAAGTATAAATCCAAATCCCTTAAAAAGTATAAGCTCATCATTCCTATCCTGCAAATTATGTGCCAATTGCTTGCCGAATCAACTAATGGAGATGAAGATGATGATCTTGCTCCAGATCGAGCTGCTGCAGAAGTAATTGACACTATGGCTTTGAATCTTCCTAAGCAAGTCTTCAGTCCTGTTCTTGAATTCGCATCTTTAAGCAGTCAGAATGCAAATCCCAAGTATAGGGAAGCTTCTGTTACAGCTTTAGGTGTCATTTCAGAGGGTTGTTTGGAGTTGATGAAAAATAAGTTGGAGCCAGTTCTTCATGTTGTTTTAGGTGCTTTAAGAGATCCTGAGGAAATGGTCAGGGGAGCTGCTTCCTTTGCCTTGGGTCAGTTTGCTGAGCATTTGCAGCCTGAAATTGTATCTCACCATGGAAGTGTACTACCCTGCATTTTGAATGCCCTTGAGGATGCATCTGAGGAAGTGAAGGAAAAGTCATATTATGCTTTGGCTGCATTTTGTGAGAACATGGGTGAGGAAATACTTCCATTCCTTGATCCCTTGATGAGGAAACTACTAGGGGCTCTCCACAGTAGCCCCCGAAATTTGCAGGAGACATGCATGTCTGCGATTGGTTCAGTTGCTTCTGCGGCAGAACAAGCCTTTGTTCCATATGCTGAAAGGGTTTTAGAGTTAATGAAGAGTTTCTTGGTGCTTACTAATGATGAGGATCTCTGCGCTCGAGCAAGAGCTACTGAGTTAGTTGGAATAGTTGCAATGTCTGTGGGGAGAACTGGGATGGAACCAATTTTACCCCCTTATATTGAAGCTGCAATTTCTGGATTTGGATTGGAGTTTAGTGAGCTTCGAGAGTATACTCATGGGTTCTTCAGTAATATTGCAGAAATTCTGGATGATGGTTTTATACAGTATCTTCCTCATGTTGTCCCCCTGGCATTTTCCTCCTGTAATCTGGATGATGGCTCTGCAGTGGACATTGATGAGTCTGATGACGAAAATATTAATGGATTTGGTGGAGTTTCATCCGACGATGAAGCTCATGATGAACCAAGAGTACGAAATATCAGTGTAAGAACAGGAGTTTTGGATGAAAAGGCGGCTGCAACTCAAGCTCTTGGCTTATTTGCGCTTCATACAAAGGCTTCATATGGACCCTATTTGGAGGAGTCATTAAAGATTCTAATAAGACACTCGGGATATTTTCATGAAGATGTTCGGCTTCAGGCAATCACTGCCTTGAAACATATCTTAACAGCAGCACATGCAATTTACCAGAATCATAATGAAGGACAAACAAAGGCTAAAGAAGTTCTAGATACTGTGATGAATATTTATATCAAGACTATGACTGAAGATGACGACAAGGAAGTGGTTTCCCAAGCTTGTTTGAGCCTGGCTGACATCATCAAAGATTTTGGATATATGGCGATTGAACCCTATATGTCTCGGCTGGTCGATGCCACTTTGGTACTTCTTCAGGAGAAATCAGCTTGTCAGCAGTCAGGATCTGATGATGAAATTGATGATGGTGATGTTGAACATGATGAAGAGCTCATGGATGCAGTCTCTGACCTGCTCCCTGCTTATGCCAAGTCCATGGGTCCTCATTTTGCACCTAACTTTGCAAAACTTTTTGGCCCTTTAATGGAGTTTGCGAGAGCTTCACGCCCATTGCAAGATCGGACCATGGTTGTTGCCTGCCTTGCTGAAGTTGCCCAGAACATGGGTGCTCCAATTGCCACATATGTTGATAATGTGATGCCCTTGGTTCTCAAGGAACTAACATCCTCAGACTCAACCAATAGGAGGAATGCTGCATTTTGTGTTGGTGAGTTGTGCAGAAATGGGGGTGAGGGGACATTCAAATATTATGGAGATATATTACGTCGGCTTTCCCCACTATTTGGGGAATCTGAGCCAGATAATGCCGTCAGGGATAATGCAGCTGGTGCAGTTGCAAGAATGATAATGGTGCACCCAGAGCTTATCCCATTGAATGAGGTACTTCCTGTTTTTTTGAAAGTTCTTCCATTAAAAGAAGATCACGAGGAGTCCATGGCAGTTTACACTTGCGTCTCTACTCTTGTTTTATCATCTAATGCCGAGATTCTTTCTCTGGTCCCTGAGTTGGTTAATGTATTTGCTCAAGTTGTGGCATCACCAGTTGAAACTACCGAAGTCAAAGAACATGTAGGCAGAGCTTTTACTCACCTGGTTTCAATCTATGGCCATCAAATGCAGCCCCTTCTTAACAGTCTCTCCCCTCAACATGCAAATGCCCTGGCCGTATTTGCCCCAAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0017038 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061608 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT IBN_N Vac14_Fab1_bd

Protein Analysis

1049

Amino Acids

115.16

Weight (kDa)

4.93

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	23 - 87	2.7e-15	Importin-beta N-terminal domain
TPR_IPO5	PF25780	93 - 251	1.3e-33	IPO5-like, TPR repeats
TOR1L1_N	PF24714	318 - 535	8.4e-12	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	351 - 405	1.1e-07	HEAT-like repeat
TPR_IMB1	PF25574	380 - 515	7.1e-10	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27640
fragaria_vesca	FvH4_5g29150
malus_domestica	MD08G1233900.v1.1 MD08G1234100.v1.1 MD15G1425400.v1.1
prunus_persica	Prupe.1G571100_v2.0.a1 Prupe.1G571100_v2.0.a1
pyrus_communis	pycom08g20240 pycom15g37710
rosa_chinensis	RchiOBHm_Chr7g0221821
rosa_laevigata	RLG00000002119
rosa_multiflora	Rmu_sc0005834.1_g000014
rosa_roxburghii	Rroxscaffold_3G00237670
rosa_rugosa	Rorug07G0203600
rosa_samantha	Rh7BG335300 Rh7CG362100 Rh7DG342400
rosa_wichuraiana	Rw7G029220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1441
Acc16I	TGCGCA	1 cut(s)	390
Acc36I	ACCTGC	1 cut(s)	2421
AccB7I	CCANNNNNTGG	2 cut(s)	2563, 2744
AccBSI	CCGCTC	1 cut(s)	116
AccI	GTMKAC	1 cut(s)	1694
AclWI	GGATC	5 cut(s)	412, 1160, 1370, 1557, 2353
AcoI	YGGCCR	3 cut(s)	196, 3067, 3123
AcsI	RAATTY	6 cut(s)	566, 596, 605, 1019, 1423, 1725
AcuI	CTGAAG	6 cut(s)	988, 1693, 2045, 2211, 2300, 2568
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	4 cut(s)	1260, 1896, 2310, 2844
AflIII	ACRYGT	2 cut(s)	794, 3028
AjiI	CACGTC	1 cut(s)	797
AjnI	CCWGG	4 cut(s)	1770, 2232, 3051, 3120
AjuI	GAANNNNNNNTTGG	4 cut(s)	1109, 1141, 1511, 1543
Alw21I	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
Alw26I	GTCTC	6 cut(s)	506, 1427, 2289, 2410, 2920, 3101
Alw44I	GTGCAC	1 cut(s)	2813
AlwI	GGATC	5 cut(s)	412, 1160, 1370, 1557, 2353
AlwNI	CAGNNNCTG	4 cut(s)	13, 37, 2348, 2408
Ama87I	CYCGRG	2 cut(s)	1560, 2032
AoxI	GGCC	6 cut(s)	196, 204, 347, 2476, 3067, 3123
ApaLI	GTGCAC	1 cut(s)	2813
ApoI	RAATTY	6 cut(s)	566, 596, 605, 1019, 1423, 1725
AseI	ATTAAT	1 cut(s)	1842
Asp700I	GAANNNNTTC	4 cut(s)	609, 1362, 1523, 2052
AspLEI	GCGC	3 cut(s)	391, 1559, 1969
AsuC2I	CCSGG	1 cut(s)	58
AsuHPI	GGTGA	9 cut(s)	184, 253, 1238, 1364, 2381, 2681, 2702, 2991, 3041
AvaI	CYCGRG	2 cut(s)	1560, 2032
AvaII	GGWCC	8 cut(s)	73, 97, 109, 582, 1991, 2441, 2523, 2959
AxyI	CCTNAGG	2 cut(s)	102, 1170
BaeGI	GKGCMC	1 cut(s)	2817
BalI	TGGCCA	1 cut(s)	3069
BanII	GRGCYC	2 cut(s)	1405, 2394
BauI	CACGAG	1 cut(s)	2885
BbsI	GAAGAC	1 cut(s)	994
Bbv12I	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
BbvCI	CCTCAGC	1 cut(s)	219
BccI	CCATC	6 cut(s)	572, 1612, 1730, 1793, 2360, 3078
BceAI	ACGGC	3 cut(s)	155, 2753, 3110
BciT130I	CCWGG	4 cut(s)	1772, 2234, 3053, 3122
BcnI	CCSGG	1 cut(s)	58
BcoDI	GTCTC	6 cut(s)	506, 1427, 2289, 2410, 2920, 3101
BfaI	CTAG	4 cut(s)	516, 563, 1397, 2153
BfmI	CTRYAG	2 cut(s)	957, 1806
BfuAI	ACCTGC	1 cut(s)	2421
BlpI	GCTNAGC	1 cut(s)	1218
Bme1390I	CCNGG	5 cut(s)	58, 1772, 2234, 3053, 3122
Bme18I	GGWCC	8 cut(s)	73, 97, 109, 582, 1991, 2441, 2523, 2959
BmeT110I	CYCGRG	2 cut(s)	1560, 2032
BmgBI	CACGTC	1 cut(s)	797
BmiI	GGNNCC	8 cut(s)	99, 111, 583, 1131, 1623, 1993, 2442, 2961
BmrFI	CCNGG	5 cut(s)	58, 1772, 2234, 3053, 3122
BmrI	ACTGGG	2 cut(s)	211, 1623
BmsI	GCATC	9 cut(s)	30, 267, 1034, 1279, 1301, 2287, 2389, 2589, 3005
BmuI	ACTGGG	2 cut(s)	211, 1623
BpiI	GAAGAC	1 cut(s)	994
BpmI	CTGGAG	2 cut(s)	35, 927
Bpu10I	CCTNAGC	3 cut(s)	93, 219, 993
Bpu1102I	GCTNAGC	1 cut(s)	1218
BpuEI	CTTGAG	7 cut(s)	209, 527, 754, 1304, 1932, 2597, 2970
BpuMI	CCSGG	1 cut(s)	58
BsaBI	GATNNNNATC	2 cut(s)	933, 1548
BsaHI	GRCGYC	1 cut(s)	54
BsaJI	CCNNGG	9 cut(s)	264, 1203, 1249, 1770, 2436, 2526, 2604, 2895, 3120
BsaWI	WCCGGW	1 cut(s)	280
BsaXI	ACNNNNNCTCC	2 cut(s)	3083, 3113
Bse118I	RCCGGY	1 cut(s)	194
Bse1I	ACTGG	5 cut(s)	206, 294, 1133, 1618, 3002
Bse21I	CCTNAGG	2 cut(s)	102, 1170
Bse3DI	GCAATG	2 cut(s)	1602, 2510
Bse8I	GATNNNNATC	2 cut(s)	933, 1548
BseBI	CCWGG	4 cut(s)	1772, 2234, 3053, 3122
BseDI	CCNNGG	9 cut(s)	264, 1203, 1249, 1770, 2436, 2526, 2604, 2895, 3120
BseJI	GATNNNNATC	2 cut(s)	933, 1548
BseMI	GCAATG	2 cut(s)	1602, 2510
BseMII	CTCAG	9 cut(s)	116, 233, 1161, 1209, 1287, 1566, 2643, 2745, 2955
BseNI	ACTGG	5 cut(s)	206, 294, 1133, 1618, 3002
BseRI	GAGGAG	3 cut(s)	207, 2018, 2903
BseSI	GKGCMC	1 cut(s)	2817
BseYI	CCCAGC	2 cut(s)	334, 614
BsgI	GTGCAG	5 cut(s)	522, 696, 767, 2698, 2811
BshFI	GGCC	6 cut(s)	198, 206, 349, 2478, 3069, 3125
BsiHKAI	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
BsiHKCI	CYCGRG	2 cut(s)	1560, 2032
BsiSI	CCGG	5 cut(s)	44, 58, 195, 281, 339
BslFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmAI	GTCTC	6 cut(s)	506, 1427, 2289, 2410, 2920, 3101
BsmBI	CGTCTC	1 cut(s)	2920
BsmFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmI	GAATGC	3 cut(s)	1048, 1282, 2656
BsnI	GGCC	6 cut(s)	198, 206, 349, 2478, 3069, 3125
BsoBI	CYCGRG	2 cut(s)	1560, 2032
Bsp1286I	GDGCHC	5 cut(s)	273, 1405, 2394, 2572, 2817
Bsp1720I	GCTNAGC	1 cut(s)	1218
Bsp19I	CCATGG	5 cut(s)	264, 1249, 2436, 2526, 2895
BspANI	GGCC	6 cut(s)	198, 206, 349, 2478, 3069, 3125
BspCNI	CTCAG	9 cut(s)	115, 232, 1162, 1210, 1288, 1567, 2642, 2746, 2956
BspHI	TCATGA	3 cut(s)	574, 1879, 2044
BspLI	GGNNCC	8 cut(s)	99, 111, 583, 1131, 1623, 1993, 2442, 2961
BspMAI	CTGCAG	2 cut(s)	961, 1810
BspMI	ACCTGC	1 cut(s)	2421
BspPI	GGATC	5 cut(s)	412, 1160, 1370, 1557, 2353
BspQI	GCTCTTC	1 cut(s)	2382
BsrBI	CCGCTC	1 cut(s)	116
BsrDI	GCAATG	2 cut(s)	1602, 2510
BsrFI	RCCGGY	1 cut(s)	194
BsrI	ACTGG	5 cut(s)	206, 294, 1133, 1618, 3002
BssAI	RCCGGY	1 cut(s)	194
BssECI	CCNNGG	9 cut(s)	264, 1203, 1249, 1770, 2436, 2526, 2604, 2895, 3120
BssNAI	GTATAC	1 cut(s)	1695
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	1 cut(s)	2885
BssT1I	CCWWGG	7 cut(s)	264, 1203, 1249, 2436, 2526, 2604, 2895
Bst1107I	GTATAC	1 cut(s)	1695
Bst2BI	CACGAG	1 cut(s)	2885
Bst2UI	CCWGG	4 cut(s)	1772, 2234, 3053, 3122
Bst4CI	ACNGT	8 cut(s)	33, 275, 524, 639, 1412, 1749, 2161, 3095
Bst6I	CTCTTC	4 cut(s)	651, 723, 1514, 2382
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	4 cut(s)	326, 2072, 2102, 2789
BstC8I	GCNNGC	9 cut(s)	66, 90, 291, 483, 503, 652, 828, 903, 2539
BstDSI	CCRYGG	5 cut(s)	264, 1249, 2436, 2526, 2895
BstENI	CCTNNNNNAGG	1 cut(s)	1384
BstHHI	GCGC	3 cut(s)	391, 1559, 1969
BstMAI	GTCTC	6 cut(s)	506, 1427, 2289, 2410, 2920, 3101
BstNI	CCWGG	4 cut(s)	1772, 2234, 3053, 3122
BstNSI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
BstSCI	CCNGG	5 cut(s)	56, 1770, 2232, 3051, 3120
BstSFI	CTRYAG	2 cut(s)	957, 1806
BstSLI	GKGCMC	1 cut(s)	2817
BstV2I	GAAGAC	1 cut(s)	994
BstX2I	RGATCY	3 cut(s)	1165, 1549, 2345
BstXI	CCANNNNNNTGG	1 cut(s)	2437
BstYI	RGATCY	3 cut(s)	1165, 1549, 2345
BstZ17I	GTATAC	1 cut(s)	1695
Bsu36I	CCTNAGG	2 cut(s)	102, 1170
BsuRI	GGCC	6 cut(s)	198, 206, 349, 2478, 3069, 3125
BtgI	CCRYGG	5 cut(s)	264, 1249, 2436, 2526, 2895
BtrI	CACGTC	1 cut(s)	797
BtsI	GCAGTG	3 cut(s)	555, 1815, 2070
BtsIMutI	CAGTG	7 cut(s)	199, 301, 555, 644, 1815, 1912, 2070
BveI	ACCTGC	1 cut(s)	2421
Cac8I	GCNNGC	9 cut(s)	66, 90, 291, 483, 503, 652, 828, 903, 2539
CaiI	CAGNNNCTG	4 cut(s)	13, 37, 2348, 2408
CciI	TCATGA	3 cut(s)	574, 1879, 2044
CfoI	GCGC	3 cut(s)	391, 1559, 1969
Cfr10I	RCCGGY	1 cut(s)	194
CseI	GACGC	2 cut(s)	62, 2902
CsiI	ACCWGGT	1 cut(s)	3051
Csp6I	GTAC	4 cut(s)	1259, 1895, 2309, 2843
CspCI	CAANNNNNGTGG	4 cut(s)	1584, 1619, 2569, 2604
CviQI	GTAC	4 cut(s)	1259, 1895, 2309, 2843
DraI	TTTAAA	1 cut(s)	624
DrdI	GACNNNNNNGTC	1 cut(s)	1441
DseDI	GACNNNNNNGTC	1 cut(s)	1441
EaeI	YGGCCR	3 cut(s)	196, 3067, 3123
Eam1104I	CTCTTC	4 cut(s)	651, 723, 1514, 2382
EarI	CTCTTC	4 cut(s)	651, 723, 1514, 2382
EciI	GGCGGA	1 cut(s)	146
Ecl136II	GAGCTC	1 cut(s)	2392
Eco130I	CCWWGG	7 cut(s)	264, 1203, 1249, 2436, 2526, 2604, 2895
Eco24I	GRGCYC	2 cut(s)	1405, 2394
Eco47I	GGWCC	8 cut(s)	73, 97, 109, 582, 1991, 2441, 2523, 2959
Eco53kI	GAGCTC	1 cut(s)	2392
Eco57I	CTGAAG	6 cut(s)	988, 1693, 2045, 2211, 2300, 2568
Eco81I	CCTNAGG	2 cut(s)	102, 1170
Eco88I	CYCGRG	2 cut(s)	1560, 2032
EcoICRI	GAGCTC	1 cut(s)	2392
EcoNI	CCTNNNNNAGG	1 cut(s)	1384
EcoO109I	RGGNCCY	2 cut(s)	97, 2441
EcoRI	GAATTC	3 cut(s)	566, 605, 1019
EcoRII	CCWGG	4 cut(s)	1770, 2232, 3051, 3120
EcoT14I	CCWWGG	7 cut(s)	264, 1203, 1249, 2436, 2526, 2604, 2895
EcoT22I	ATGCAT	2 cut(s)	1294, 1442
EcoT38I	GRGCYC	2 cut(s)	1405, 2394
ErhI	CCWWGG	7 cut(s)	264, 1203, 1249, 2436, 2526, 2604, 2895
Esp3I	CGTCTC	1 cut(s)	2920
FalI	AAGNNNNNCTT	8 cut(s)	474, 506, 763, 795, 986, 1018, 1511, 1543
FaqI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
FauI	CCCGC	1 cut(s)	121
FauNDI	CATATG	3 cut(s)	1492, 1987, 2584
FblI	GTMKAC	1 cut(s)	1694
FriOI	GRGCYC	2 cut(s)	1405, 2394
FspBI	CTAG	4 cut(s)	516, 563, 1397, 2153
FspI	TGCGCA	1 cut(s)	390
GlaI	GCGC	3 cut(s)	390, 1558, 1968
GsaI	CCCAGC	2 cut(s)	338, 618
GsuI	CTGGAG	2 cut(s)	35, 927
HaeIII	GGCC	6 cut(s)	198, 206, 349, 2478, 3069, 3125
HapII	CCGG	5 cut(s)	44, 58, 195, 281, 339
HgaI	GACGC	2 cut(s)	62, 2902
HhaI	GCGC	3 cut(s)	391, 1559, 1969
Hin1I	GRCGYC	1 cut(s)	54
Hin6I	GCGC	3 cut(s)	389, 1557, 1967
HinP1I	GCGC	3 cut(s)	389, 1557, 1967
HindIII	AAGCTT	3 cut(s)	483, 1065, 2220
HpaII	CCGG	5 cut(s)	44, 58, 195, 281, 339
HphI	GGTGA	9 cut(s)	184, 253, 1238, 1364, 2381, 2681, 2702, 2991, 3041
Hpy166II	GTNNAC	5 cut(s)	1259, 1695, 1813, 2815, 2905
Hpy8I	GTNNAC	5 cut(s)	1259, 1695, 1813, 2815, 2905
Hpy99I	CGWCG	3 cut(s)	56, 1871, 2730
HpyAV	CCTTC	3 cut(s)	1300, 2120, 3095
HpyCH4III	ACNGT	8 cut(s)	33, 275, 524, 639, 1412, 1749, 2161, 3095
HpyCH4IV	ACGT	4 cut(s)	153, 455, 796, 2725
HpySE526I	ACGT	4 cut(s)	153, 455, 796, 2725
Hsp92I	GRCGYC	1 cut(s)	54
HspAI	GCGC	3 cut(s)	389, 1557, 1967
LguI	GCTCTTC	1 cut(s)	2382
LmnI	GCTCC	7 cut(s)	16, 268, 946, 1129, 1187, 2421, 2575
LweI	GCATC	9 cut(s)	30, 267, 1034, 1279, 1301, 2287, 2389, 2589, 3005
MabI	ACCWGGT	1 cut(s)	3051
MaeI	CTAG	4 cut(s)	516, 563, 1397, 2153
MaeII	ACGT	4 cut(s)	153, 455, 796, 2725
MaeIII	GTNAC	1 cut(s)	1072
MbiI	CCGCTC	1 cut(s)	116
MfeI	CAATTG	3 cut(s)	444, 896, 2574
MflI	RGATCY	3 cut(s)	1165, 1549, 2345
MhlI	GDGCHC	5 cut(s)	273, 1405, 2394, 2572, 2817
MlsI	TGGCCA	1 cut(s)	3069
MluNI	TGGCCA	1 cut(s)	3069
MlyI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
MmeI	TCCRAC	3 cut(s)	1107, 1564, 1890
Mox20I	TGGCCA	1 cut(s)	3069
Mph1103I	ATGCAT	2 cut(s)	1294, 1442
MroXI	GAANNNNTTC	4 cut(s)	609, 1362, 1523, 2052
MscI	TGGCCA	1 cut(s)	3069
MslI	CAYNNNNRTG	4 cut(s)	263, 1254, 2049, 3114
Msp20I	TGGCCA	1 cut(s)	3069
MspA1I	CMGCKG	1 cut(s)	2786
MspI	CCGG	5 cut(s)	44, 58, 195, 281, 339
MspR9I	CCNGG	5 cut(s)	58, 1772, 2234, 3053, 3122
MunI	CAATTG	3 cut(s)	444, 896, 2574
Mva1269I	GAATGC	3 cut(s)	1048, 1282, 2656
MvaI	CCWGG	4 cut(s)	1772, 2234, 3053, 3122
NciI	CCSGG	1 cut(s)	58
NcoI	CCATGG	5 cut(s)	264, 1249, 2436, 2526, 2895
NdeI	CATATG	3 cut(s)	1492, 1987, 2584
NlaIV	GGNNCC	8 cut(s)	99, 111, 583, 1131, 1623, 1993, 2442, 2961
NmeAIII	GCCGAG	2 cut(s)	2266, 2968
NsbI	TGCGCA	1 cut(s)	390
NsiI	ATGCAT	2 cut(s)	1294, 1442
NspI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
PaeR7I	CTCGAG	1 cut(s)	1560
PagI	TCATGA	3 cut(s)	574, 1879, 2044
PciI	ACATGT	1 cut(s)	3028
PciSI	GCTCTTC	1 cut(s)	2382
PctI	GAATGC	3 cut(s)	1048, 1282, 2656
PdmI	GAANNNNTTC	4 cut(s)	609, 1362, 1523, 2052
PfeI	GAWTC	7 cut(s)	704, 908, 985, 2017, 2116, 2750, 2947
PflMI	CCANNNNNTGG	2 cut(s)	2563, 2744
PleI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpsI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpuMI	RGGWCCY	2 cut(s)	97, 2441
PscI	ACATGT	1 cut(s)	3028
PshBI	ATTAAT	1 cut(s)	1842
Psp124BI	GAGCTC	1 cut(s)	2394
Psp5II	RGGWCCY	2 cut(s)	97, 2441
Psp6I	CCWGG	4 cut(s)	1770, 2232, 3051, 3120
PspFI	CCCAGC	2 cut(s)	334, 614
PspGI	CCWGG	4 cut(s)	1770, 2232, 3051, 3120
PspN4I	GGNNCC	8 cut(s)	99, 111, 583, 1131, 1623, 1993, 2442, 2961
PspPPI	RGGWCCY	2 cut(s)	97, 2441
PspXI	VCTCGAGB	1 cut(s)	1560
PsrI	GAACNNNNNNTAC	4 cut(s)	1614, 1646, 1878, 1910
PstI	CTGCAG	2 cut(s)	961, 1810
PstNI	CAGNNNCTG	4 cut(s)	13, 37, 2348, 2408
PsuI	RGATCY	3 cut(s)	1165, 1549, 2345
PvuII	CAGCTG	1 cut(s)	2786
RsaI	GTAC	4 cut(s)	1260, 1896, 2310, 2844
RsaNI	GTAC	4 cut(s)	1259, 1895, 2309, 2843
RseI	CAYNNNNRTG	4 cut(s)	263, 1254, 2049, 3114
SacI	GAGCTC	1 cut(s)	2394
SapI	GCTCTTC	1 cut(s)	2382
SchI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
ScrFI	CCNGG	5 cut(s)	58, 1772, 2234, 3053, 3122
SduI	GDGCHC	5 cut(s)	273, 1405, 2394, 2572, 2817
SexAI	ACCWGGT	1 cut(s)	3051
SfaNI	GCATC	9 cut(s)	30, 267, 1034, 1279, 1301, 2287, 2389, 2589, 3005
SfcI	CTRYAG	2 cut(s)	957, 1806
Sfr274I	CTCGAG	1 cut(s)	1560
SinI	GGWCC	8 cut(s)	73, 97, 109, 582, 1991, 2441, 2523, 2959
SlaI	CTCGAG	1 cut(s)	1560
SmiMI	CAYNNNNRTG	4 cut(s)	263, 1254, 2049, 3114
SmlI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1560, 1947, 2612, 2985
SmoI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1560, 1947, 2612, 2985
SspI	AATATT	4 cut(s)	1717, 1840, 2170, 2708
SspMI	CTAG	4 cut(s)	516, 563, 1397, 2153
SstI	GAGCTC	1 cut(s)	2394
StyD4I	CCNGG	5 cut(s)	56, 1770, 2232, 3051, 3120
StyI	CCWWGG	7 cut(s)	264, 1203, 1249, 2436, 2526, 2604, 2895
TaaI	ACNGT	8 cut(s)	33, 275, 524, 639, 1412, 1749, 2161, 3095
TaiI	ACGT	4 cut(s)	156, 458, 799, 2728
TaqI	TCGA	7 cut(s)	460, 601, 759, 949, 1561, 1687, 2295
TaqII	GACCGA	1 cut(s)	599
TatI	WGTACW	1 cut(s)	1258
TauI	GCSGC	6 cut(s)	64, 88, 170, 289, 1472, 1940
TfiI	GAWTC	7 cut(s)	704, 908, 985, 2017, 2116, 2750, 2947
TscAI	CASTG	7 cut(s)	206, 301, 555, 644, 1815, 1912, 2077
TspRI	CASTG	7 cut(s)	206, 301, 555, 644, 1815, 1912, 2077
Van91I	CCANNNNNTGG	2 cut(s)	2563, 2744
VneI	GTGCAC	1 cut(s)	2813
VpaK11BI	GGWCC	8 cut(s)	73, 97, 109, 582, 1991, 2441, 2523, 2959
VspI	ATTAAT	1 cut(s)	1842
XagI	CCTNNNNNAGG	1 cut(s)	1384
XapI	RAATTY	6 cut(s)	566, 596, 605, 1019, 1423, 1725
XbaI	TCTAGA	2 cut(s)	562, 2152
XceI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	342
XhoI	CTCGAG	1 cut(s)	1560
XmiI	GTMKAC	1 cut(s)	1694
XmnI	GAANNNNTTC	4 cut(s)	609, 1362, 1523, 2052
XspI	CTAG	4 cut(s)	516, 563, 1397, 2153
Zsp2I	ATGCAT	2 cut(s)	1294, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.