Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005834.1

Orthogroup ID

OG0013167

Physical Location & Seq

Genomic Coordinates Reverse (-)

42518 .. 50291

Gene Structure 7774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005834.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

atgtcgcagtcgctggagctattgctgatacaattcctgatgccggacaacgacgcccggcggcaagccgaggaccagattaagcggctggccaaagaccctcaggtggtccccgctctcgttcaacacctccgcaccgccaagactcccaacgttcgccagctcgccgccgttcttctccgcaagaagatcaccggccactgggccaagctctctcctcagctcaagaacctcgtcaagcagtccctcattgagagcatcaccatggagcacagtccgccggtgaggcgagccagtgccaatgtagttagtgtcgtcgcaaaatatgctgtcccggctggagaatggccggacttgttgccctttctgtttcaatgtagtcagagtgcgcaggaggagcatagagaggtggcattgatccttttcagctctttgactgaaacaattgggaatacgtttcgaccacatttcgcagatttgcaagctcttcttctgaaatgcttgcaggatgagacaagcaaccgtgtcagagttgctgcactcaaggcagtggggtcttttctagaattcactcatgatgggactgaagtggtcaagtttcgagaattcattcccagcattttaaatgtatcaagacaatgccttgctgctggcgaagaggatgttgctgtaattgcttttgagatttttgatgagttgattgaatctcctgcacctcttcttggggagtctattaaatccattgtgcagttctctcttgaagtttgctcaagtcaaacgttggagtctaacactcgtcatcaggcaatccaaataatctcatggctagcaaagtataaatccaaatcccttaaaaagtataagctcatcattcctattctgcaaattatgtgcccattgcttgccgaatcaactaatggagatgaagatgatgatcttgctccggatcgagctgctgcagaagttattgacactatggctttgaatataccgaagcaagtcttcagtcctgttctcgaatttgcttctttaagcagtcagaatgcaaatcccaagtatagggaagcttctgttactgctttaggtgtcatttcagagggttgtttggattcgatgaaagataagatggaaccagttcttcatcttgttttaggtgctttgagagatcctgaggaaatggtcaggggagctgcttcctttgccttgggtcagtttgctgagcatttacagcctgaaattgtatctcactatgaaagtgtactaccctgcattttgaatgcccttgaggatgcatctgacgaagtgaaggaaaagtcatattatgctttggctgcattttgtgagaacatgggtgaggaaatacttccattccttgatcccttgatggggaaactactaggggctctccatagtagccctcgtaatttgcaggagacatgcatgtctgcgattggttcagttgcttctgctgcagaacaagcctttgttccatatgccgaaagggttttggagttgatgaagagtttcttggtgcttactaatgatgaggatctctgttcacgagcaagagctactgaattagttggaatagttgcgatgtctgtggggagaactgggatggaaccaattttgcccccttatatagaagctgcaatttctggttttggattggaatttagtgagcttcgagaatatactcatggattcttcagtaacattgcagaaattttggatgaaggttttatacagtatcttcctcatgttgtccccctggcattttcctcctgcaatcttgatgatggctctgcagtggacatcgatgagtctgatgacgaaaatattaatggatttggtggagtttcatccgatgacgaagctcatgatgaaccaagagtacgaaatatcagtgtaagaacaggagttttggatgaaaaggctgctgcaactcaagcccttggcttatttgcgcagcatacaaagacttcatatggaccctatttggaggagtcattgaagattctaattagacactcaggctattttcatgaagatgttcggcttcaggcaatcattgccttgaaacatattttaacagcagcacatgcgatataccagaatcataatgaaggagaagcaaaggctaaagaagtactagatactgtcatgaatatttatatcaagactatgactgaagatgatgacaaggaagtggttgctcaagcttgtatgagccttgctgacatcatcaaagattttggatatatggcgattgaaccctatatggctcggctggtcgatgctactttggtactgcttcaggagaaatcagcttgtcagcagatagcatctgatgatgaaattgatgatggtgatgttgaacatgatgaagagctcatggatgcagtctctgacctgctccctgccttcgccaagtcaatgggtcctcattttgcatctaattttgcaaaacttttcggccctttaatggaatttgcgagagcttcacgcccattgcaagatcggaccatggttgttgcctgccttgctgaagttgctcagaacatgggtgctccaattgcagcatatgtcgataatgtgatgcccttggtactcaaggaactatcatcctcagactcaaccaataggaggaatgctgcattttgtgttggagagttgtgcagaaatgggggtgaggggacattcaaatactatggagatatattacgtcggctttccccactatttggggaatctgagccagataatgctgtcagggataatgcagctggtgcagttgcaagaatgataatggtgcaccccgaacttatcccattgaatgaggtacttcctgtttttttgaaagttcttccattaaaagaagatcatgaggagtccatggcagtgtacacttgcatctctactcttgttttatcatctaatgctgagattctttctctggtccctgagttggtcaatgtatttgctcaagttgtggcatcaccacttgaaactatcgaggtcaaagcacatgcaggcagagctttttctcacctgatttcaatttatggtcatcaaatgcagccccttctgaacaatctctcccctcaacatgccaatgcccttgctgcatttgcccccaaaagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0017038 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061608 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT IBN_N Vac14_Fab1_bd

Protein Analysis

1048

Amino Acids

115.09

Weight (kDa)

4.86

Isoelectric Point (pI)

48.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27640
fragaria_vesca	FvH4_5g29150
malus_domestica	MD08G1233900.v1.1 MD08G1234100.v1.1 MD15G1425400.v1.1
prunus_persica	Prupe.1G571100_v2.0.a1 Prupe.1G571100_v2.0.a1
pyrus_communis	pycom08g20240 pycom15g37710
rosa_chinensis	RchiOBHm_Chr7g0221821
rosa_laevigata	RLG00000002119
rosa_multiflora	Rmu_sc0005834.1_g000014
rosa_roxburghii	Rroxscaffold_3G00237670
rosa_rugosa	Rorug07G0203600
rosa_samantha	Rh7BG335300 Rh7CG362100 Rh7DG342400
rosa_wichuraiana	Rw7G029220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1441
Acc16I	TGCGCA	2 cut(s)	390, 1968
Acc36I	ACCTGC	1 cut(s)	2421
AccB7I	CCANNNNNTGG	1 cut(s)	2744
AccBSI	CCGCTC	1 cut(s)	116
AccIII	TCCGGA	1 cut(s)	943
AciI	CCGC	8 cut(s)	61, 85, 114, 133, 138, 168, 181, 278
AclI	AACGTT	2 cut(s)	153, 779
AclWI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
AcoI	YGGCCR	3 cut(s)	90, 196, 347
AcsI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
AcuI	CTGAAG	7 cut(s)	606, 988, 1693, 2045, 2211, 2300, 2568
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	7 cut(s)	1260, 1896, 2151, 2310, 2610, 2844, 2906
AjnI	CCWGG	1 cut(s)	1770
AjuI	GAANNNNNNNTTGG	2 cut(s)	1511, 1543
AloI	GAACNNNNNNTCC	2 cut(s)	3083, 3115
Alw21I	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
Alw26I	GTCTC	3 cut(s)	506, 1427, 2410
Alw44I	GTGCAC	1 cut(s)	2813
AlwI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
AlwNI	CAGNNNCTG	2 cut(s)	13, 2408
Aor13HI	TCCGGA	1 cut(s)	943
AoxI	GGCC	5 cut(s)	90, 196, 204, 347, 2476
ApaLI	GTGCAC	1 cut(s)	2813
ApoI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
AseI	ATTAAT	1 cut(s)	1842
Asp700I	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
AspLEI	GCGC	2 cut(s)	391, 1969
AspS9I	GGNCC	8 cut(s)	73, 109, 204, 1991, 2441, 2477, 2523, 2959
AsuC2I	CCSGG	2 cut(s)	58, 335
AsuHPI	GGTGA	8 cut(s)	184, 253, 295, 1364, 2381, 2702, 2991, 3041
AsuNHI	GCTAGC	1 cut(s)	826
AvaII	GGWCC	6 cut(s)	73, 109, 1991, 2441, 2523, 2959
AxyI	CCTNAGG	2 cut(s)	102, 1170
BaeGI	GKGCMC	2 cut(s)	896, 2817
BalI	TGGCCA	1 cut(s)	92
BanII	GRGCYC	2 cut(s)	1405, 2394
BarI	GAAGNNNNNNTAC	2 cut(s)	1728, 1760
BauI	CACGAG	1 cut(s)	1560
BbsI	GAAGAC	1 cut(s)	994
Bbv12I	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
BbvCI	CCTCAGC	1 cut(s)	219
BccI	CCATC	6 cut(s)	572, 1120, 1378, 1612, 1793, 2360
BceAI	ACGGC	1 cut(s)	155
BciT130I	CCWGG	1 cut(s)	1772
BcnI	CCSGG	2 cut(s)	58, 335
BcoDI	GTCTC	3 cut(s)	506, 1427, 2410
BfaI	CTAG	4 cut(s)	563, 827, 1397, 2153
BfmI	CTRYAG	3 cut(s)	957, 1470, 1806
BfuAI	ACCTGC	1 cut(s)	2421
BglI	GCCNNNNNGGC	1 cut(s)	286
BlpI	GCTNAGC	1 cut(s)	1218
BmcAI	AGTACT	1 cut(s)	2151
Bme1390I	CCNGG	3 cut(s)	58, 335, 1772
Bme18I	GGWCC	6 cut(s)	73, 109, 1991, 2441, 2523, 2959
BmgT120I	GGNCC	8 cut(s)	73, 109, 204, 1991, 2441, 2477, 2523, 2959
BmiI	GGNNCC	6 cut(s)	111, 1131, 1623, 1993, 2442, 2961
BmrFI	CCNGG	3 cut(s)	58, 335, 1772
BmrI	ACTGGG	2 cut(s)	211, 1623
BmtI	GCTAGC	1 cut(s)	830
BmuI	ACTGGG	2 cut(s)	211, 1623
BpiI	GAAGAC	1 cut(s)	994
BpmI	CTGGAG	2 cut(s)	35, 360
Bpu10I	CCTNAGC	1 cut(s)	219
Bpu1102I	GCTNAGC	1 cut(s)	1218
BpuEI	CTTGAG	8 cut(s)	209, 527, 754, 1304, 1932, 2202, 2597, 2970
BpuMI	CCSGG	2 cut(s)	58, 335
Bsa29I	ATCGAT	1 cut(s)	1818
BsaBI	GATNNNNATC	2 cut(s)	933, 1548
BsaHI	GRCGYC	1 cut(s)	54
BsaJI	CCNNGG	8 cut(s)	69, 264, 1203, 1770, 1954, 2526, 2604, 2895
BsaWI	WCCGGW	1 cut(s)	943
BsaXI	ACNNNNNCTCC	2 cut(s)	3083, 3113
Bse118I	RCCGGY	2 cut(s)	194, 280
Bse1I	ACTGG	4 cut(s)	206, 294, 1133, 1618
Bse21I	CCTNAGG	2 cut(s)	102, 1170
Bse3DI	GCAATG	4 cut(s)	896, 1716, 2070, 2510
Bse8I	GATNNNNATC	2 cut(s)	933, 1548
BseAI	TCCGGA	1 cut(s)	943
BseBI	CCWGG	1 cut(s)	1772
BseCI	ATCGAT	1 cut(s)	1818
BseDI	CCNNGG	8 cut(s)	69, 264, 1203, 1770, 1954, 2526, 2604, 2895
BseGI	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BseJI	GATNNNNATC	2 cut(s)	933, 1548
BseMI	GCAATG	4 cut(s)	896, 1716, 2070, 2510
BseNI	ACTGG	4 cut(s)	206, 294, 1133, 1618
BseRI	GAGGAG	4 cut(s)	207, 410, 2018, 2903
BseSI	GKGCMC	2 cut(s)	896, 2817
BseYI	CCCAGC	1 cut(s)	614
BsgI	GTGCAG	5 cut(s)	522, 696, 767, 2698, 2811
BshFI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BshVI	ATCGAT	1 cut(s)	1818
BsiHKAI	GWGCWC	4 cut(s)	273, 2394, 2572, 2817
BsiSI	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 944
BslFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmAI	GTCTC	3 cut(s)	506, 1427, 2410
BsmFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmI	GAATGC	3 cut(s)	1048, 1282, 2656
BsnI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
Bsp1286I	GDGCHC	6 cut(s)	273, 896, 1405, 2394, 2572, 2817
Bsp13I	TCCGGA	1 cut(s)	943
Bsp1407I	TGTACA	1 cut(s)	2904
Bsp143I	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Bsp1720I	GCTNAGC	1 cut(s)	1218
Bsp19I	CCATGG	3 cut(s)	264, 2526, 2895
BspACI	CCGC	8 cut(s)	61, 85, 114, 133, 138, 168, 181, 278
BspANI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BspDI	ATCGAT	1 cut(s)	1818
BspEI	TCCGGA	1 cut(s)	943
BspHI	TCATGA	5 cut(s)	574, 1879, 2044, 2163, 2884
BspLI	GGNNCC	6 cut(s)	111, 1131, 1623, 1993, 2442, 2961
BspMAI	CTGCAG	3 cut(s)	961, 1474, 1810
BspMI	ACCTGC	1 cut(s)	2421
BspOI	GCTAGC	1 cut(s)	830
BspPI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
BspQI	GCTCTTC	2 cut(s)	492, 2382
BsrBI	CCGCTC	1 cut(s)	116
BsrDI	GCAATG	4 cut(s)	896, 1716, 2070, 2510
BsrFI	RCCGGY	2 cut(s)	194, 280
BsrGI	TGTACA	1 cut(s)	2904
BsrI	ACTGG	4 cut(s)	206, 294, 1133, 1618
BssAI	RCCGGY	2 cut(s)	194, 280
BssECI	CCNNGG	8 cut(s)	69, 264, 1203, 1770, 1954, 2526, 2604, 2895
BssMI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	1 cut(s)	1560
BssT1I	CCWWGG	6 cut(s)	264, 1203, 1954, 2526, 2604, 2895
Bst2BI	CACGAG	1 cut(s)	1560
Bst2UI	CCWGG	1 cut(s)	1772
Bst4CI	ACNGT	4 cut(s)	275, 524, 1749, 2161
Bst6I	CTCTTC	5 cut(s)	492, 651, 723, 1514, 2382
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	4 cut(s)	326, 2072, 2102, 2789
BstAUI	TGTACA	1 cut(s)	2904
BstDSI	CCRYGG	3 cut(s)	264, 2526, 2895
BstF5I	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BstHHI	GCGC	2 cut(s)	391, 1969
BstKTI	GATC	9 cut(s)	192, 420, 937, 949, 1168, 1378, 1552, 2521, 2884
BstMAI	GTCTC	3 cut(s)	506, 1427, 2410
BstMBI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BstNI	CCWGG	1 cut(s)	1772
BstNSI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
BstSCI	CCNGG	3 cut(s)	56, 333, 1770
BstSFI	CTRYAG	3 cut(s)	957, 1470, 1806
BstSLI	GKGCMC	2 cut(s)	896, 2817
BstV2I	GAAGAC	1 cut(s)	994
BstX2I	RGATCY	2 cut(s)	1165, 1549
BstXI	CCANNNNNNTGG	1 cut(s)	2437
BstYI	RGATCY	2 cut(s)	1165, 1549
Bsu15I	ATCGAT	1 cut(s)	1818
Bsu36I	CCTNAGG	2 cut(s)	102, 1170
BsuRI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BsuTUI	ATCGAT	1 cut(s)	1818
BtgI	CCRYGG	3 cut(s)	264, 2526, 2895
BtgZI	GCGATG	1 cut(s)	1610
BtsCI	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BtsI	GCAGTG	3 cut(s)	555, 1815, 2907
BtsIMutI	CAGTG	6 cut(s)	199, 301, 555, 1815, 1912, 2907
BveI	ACCTGC	1 cut(s)	2421
CaiI	CAGNNNCTG	2 cut(s)	13, 2408
CciI	TCATGA	5 cut(s)	574, 1879, 2044, 2163, 2884
CfoI	GCGC	2 cut(s)	391, 1969
Cfr10I	RCCGGY	2 cut(s)	194, 280
Cfr13I	GGNCC	8 cut(s)	73, 109, 204, 1991, 2441, 2477, 2523, 2959
ClaI	ATCGAT	1 cut(s)	1818
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
CviQI	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
DpnI	GATC	9 cut(s)	191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
DpnII	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
DraI	TTTAAA	1 cut(s)	624
DrdI	GACNNNNNNGTC	1 cut(s)	1441
DseDI	GACNNNNNNGTC	1 cut(s)	1441
EaeI	YGGCCR	3 cut(s)	90, 196, 347
Eam1104I	CTCTTC	5 cut(s)	492, 651, 723, 1514, 2382
EarI	CTCTTC	5 cut(s)	492, 651, 723, 1514, 2382
EciI	GGCGGA	1 cut(s)	267
Ecl136II	GAGCTC	1 cut(s)	2392
Eco130I	CCWWGG	6 cut(s)	264, 1203, 1954, 2526, 2604, 2895
Eco24I	GRGCYC	2 cut(s)	1405, 2394
Eco47I	GGWCC	6 cut(s)	73, 109, 1991, 2441, 2523, 2959
Eco53kI	GAGCTC	1 cut(s)	2392
Eco57I	CTGAAG	7 cut(s)	606, 988, 1693, 2045, 2211, 2300, 2568
Eco81I	CCTNAGG	2 cut(s)	102, 1170
EcoICRI	GAGCTC	1 cut(s)	2392
EcoO109I	RGGNCCY	1 cut(s)	2441
EcoRI	GAATTC	2 cut(s)	566, 605
EcoRII	CCWGG	1 cut(s)	1770
EcoT14I	CCWWGG	6 cut(s)	264, 1203, 1954, 2526, 2604, 2895
EcoT22I	ATGCAT	2 cut(s)	1294, 1442
EcoT38I	GRGCYC	2 cut(s)	1405, 2394
ErhI	CCWWGG	6 cut(s)	264, 1203, 1954, 2526, 2604, 2895
FalI	AAGNNNNNCTT	6 cut(s)	474, 506, 986, 1018, 1511, 1543
FaqI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
FauI	CCCGC	1 cut(s)	121
FauNDI	CATATG	3 cut(s)	1492, 1987, 2584
FokI	GGATG	9 cut(s)	521, 674, 1301, 1630, 1745, 1849, 1940, 2411, 2611
FriOI	GRGCYC	2 cut(s)	1405, 2394
FspBI	CTAG	4 cut(s)	563, 827, 1397, 2153
FspI	TGCGCA	2 cut(s)	390, 1968
GlaI	GCGC	2 cut(s)	390, 1968
GsaI	CCCAGC	1 cut(s)	618
GsuI	CTGGAG	2 cut(s)	35, 360
HaeIII	GGCC	5 cut(s)	92, 198, 206, 349, 2478
HapII	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 944
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	391, 1969
Hin1I	GRCGYC	1 cut(s)	54
Hin6I	GCGC	2 cut(s)	389, 1967
HinP1I	GCGC	2 cut(s)	389, 1967
HindIII	AAGCTT	2 cut(s)	1065, 2220
HpaII	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 944
HphI	GGTGA	8 cut(s)	184, 253, 295, 1364, 2381, 2702, 2991, 3041
Hpy166II	GTNNAC	6 cut(s)	1259, 1559, 1813, 2815, 2905, 2907
Hpy8I	GTNNAC	6 cut(s)	1259, 1559, 1813, 2815, 2905, 2907
Hpy99I	CGWCG	3 cut(s)	56, 320, 2730
HpyAV	CCTTC	5 cut(s)	1300, 1730, 2120, 2434, 3095
HpyCH4III	ACNGT	4 cut(s)	275, 524, 1749, 2161
HpyCH4IV	ACGT	4 cut(s)	153, 455, 779, 2725
HpySE526I	ACGT	4 cut(s)	153, 455, 779, 2725
Hsp92I	GRCGYC	1 cut(s)	54
HspAI	GCGC	2 cut(s)	389, 1967
Kpn2I	TCCGGA	1 cut(s)	943
Kzo9I	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
LguI	GCTCTTC	2 cut(s)	492, 2382
LmnI	GCTCC	7 cut(s)	16, 268, 397, 946, 1187, 2421, 2575
MaeI	CTAG	4 cut(s)	563, 827, 1397, 2153
MaeII	ACGT	4 cut(s)	153, 455, 779, 2725
MaeIII	GTNAC	2 cut(s)	1072, 1712
MalI	GATC	9 cut(s)	191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
MbiI	CCGCTC	1 cut(s)	116
MboI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
MfeI	CAATTG	2 cut(s)	444, 2574
MflI	RGATCY	2 cut(s)	1165, 1549
MhlI	GDGCHC	6 cut(s)	273, 896, 1405, 2394, 2572, 2817
MlsI	TGGCCA	1 cut(s)	92
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
MmeI	TCCRAC	3 cut(s)	762, 1564, 2647
Mox20I	TGGCCA	1 cut(s)	92
Mph1103I	ATGCAT	2 cut(s)	1294, 1442
MroI	TCCGGA	1 cut(s)	943
MroXI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	9 cut(s)	81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
MslI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
Msp20I	TGGCCA	1 cut(s)	92
MspA1I	CMGCKG	1 cut(s)	2786
MspI	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 944
MspR9I	CCNGG	3 cut(s)	58, 335, 1772
MunI	CAATTG	2 cut(s)	444, 2574
Mva1269I	GAATGC	3 cut(s)	1048, 1282, 2656
MvaI	CCWGG	1 cut(s)	1772
NciI	CCSGG	2 cut(s)	58, 335
NcoI	CCATGG	3 cut(s)	264, 2526, 2895
NdeI	CATATG	3 cut(s)	1492, 1987, 2584
NdeII	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
NheI	GCTAGC	1 cut(s)	826
NlaIV	GGNNCC	6 cut(s)	111, 1131, 1623, 1993, 2442, 2961
NmeAIII	GCCGAG	2 cut(s)	94, 2266
NsbI	TGCGCA	2 cut(s)	390, 1968
NsiI	ATGCAT	2 cut(s)	1294, 1442
NspI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
PagI	TCATGA	5 cut(s)	574, 1879, 2044, 2163, 2884
PciSI	GCTCTTC	2 cut(s)	492, 2382
PctI	GAATGC	3 cut(s)	1048, 1282, 2656
PdmI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
PfeI	GAWTC	8 cut(s)	704, 908, 1109, 1704, 2017, 2116, 2750, 2947
PflMI	CCANNNNNTGG	1 cut(s)	2744
PleI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpsI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpuMI	RGGWCCY	1 cut(s)	2441
PshBI	ATTAAT	1 cut(s)	1842
Psp124BI	GAGCTC	1 cut(s)	2394
Psp1406I	AACGTT	2 cut(s)	153, 779
Psp5II	RGGWCCY	1 cut(s)	2441
Psp6I	CCWGG	1 cut(s)	1770
PspFI	CCCAGC	1 cut(s)	614
PspGI	CCWGG	1 cut(s)	1770
PspN4I	GGNNCC	6 cut(s)	111, 1131, 1623, 1993, 2442, 2961
PspPI	GGNCC	8 cut(s)	73, 109, 204, 1991, 2441, 2477, 2523, 2959
PspPPI	RGGWCCY	1 cut(s)	2441
PsrI	GAACNNNNNNTAC	2 cut(s)	1878, 1910
PstI	CTGCAG	3 cut(s)	961, 1474, 1810
PstNI	CAGNNNCTG	2 cut(s)	13, 2408
PsuI	RGATCY	2 cut(s)	1165, 1549
PvuII	CAGCTG	1 cut(s)	2786
RsaI	GTAC	7 cut(s)	1260, 1896, 2151, 2310, 2610, 2844, 2906
RsaNI	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
RseI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
SacI	GAGCTC	1 cut(s)	2394
SapI	GCTCTTC	2 cut(s)	492, 2382
SaqAI	TTAA	9 cut(s)	81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
Sau3AI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Sau96I	GGNCC	8 cut(s)	73, 109, 204, 1991, 2441, 2477, 2523, 2959
ScaI	AGTACT	1 cut(s)	2151
SchI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
ScrFI	CCNGG	3 cut(s)	58, 335, 1772
SduI	GDGCHC	6 cut(s)	273, 896, 1405, 2394, 2572, 2817
SfcI	CTRYAG	3 cut(s)	957, 1470, 1806
SgrAI	CRCCGGYG	1 cut(s)	280
SinI	GGWCC	6 cut(s)	73, 109, 1991, 2441, 2523, 2959
SmiMI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
SmlI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1947, 2217, 2612, 2985
SmoI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1947, 2217, 2612, 2985
SsiI	CCGC	8 cut(s)	61, 85, 114, 133, 138, 168, 181, 278
SspI	AATATT	2 cut(s)	1840, 2170
SspMI	CTAG	4 cut(s)	563, 827, 1397, 2153
SstI	GAGCTC	1 cut(s)	2394
StyD4I	CCNGG	3 cut(s)	56, 333, 1770
StyI	CCWWGG	6 cut(s)	264, 1203, 1954, 2526, 2604, 2895
TaaI	ACNGT	4 cut(s)	275, 524, 1749, 2161
TaiI	ACGT	4 cut(s)	156, 458, 782, 2728
TatI	WGTACW	3 cut(s)	1258, 2149, 2904
TauI	GCSGC	3 cut(s)	64, 88, 170
TfiI	GAWTC	8 cut(s)	704, 908, 1109, 1704, 2017, 2116, 2750, 2947
Tru1I	TTAA	9 cut(s)	81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
Tru9I	TTAA	9 cut(s)	81, 623, 735, 852, 1031, 1842, 2090, 2483, 2873
TscAI	CASTG	6 cut(s)	206, 301, 555, 1815, 1912, 2907
TspRI	CASTG	6 cut(s)	206, 301, 555, 1815, 1912, 2907
Van91I	CCANNNNNTGG	1 cut(s)	2744
VneI	GTGCAC	1 cut(s)	2813
VpaK11BI	GGWCC	6 cut(s)	73, 109, 1991, 2441, 2523, 2959
VspI	ATTAAT	1 cut(s)	1842
XapI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
XmnI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
XspI	CTAG	4 cut(s)	563, 827, 1397, 2153
ZrmI	AGTACT	1 cut(s)	2151
Zsp2I	ATGCAT	2 cut(s)	1294, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.