Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0013167

Physical Location & Seq

Genomic Coordinates Reverse (-)

25818443 .. 25827353

Gene Structure 8911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002119

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGTCGCAGTCGCTGGAGCTATTGCTGATACAATTTCTGATGCCGGACAACGACGCCCGGCGGCAAGCGGAGGACCAGATTAAGCGGTTGGCCAAAGACCCTCAGGTGGTCCCCGCTCTCGTTCAACACCTCCGCACCGCCAAGACTCCCAACGTTCGCCAACTCGCCGCCGTTCTTCTCCGCAAGAAGATCACCGGCCACTGGGCCAAGCTCTCTCCTCAGCTCAAGAACCTTGTCAAGCAGTCCCTCATTGAGAGCATCACCATGGAGCACAGTCCGCCGGTGAGGCGAGCCAGTGCTAATGTAGTTAGTGTCGTTGCAAAATATGCTGTCCCGGCTGGAGAATGGCCGGACTTGTTGCCCTTTCTGTTTCAATGTAGTCAGAGTGCGCAGGAGGAGCATAGAGAGGTGGCATTGATCCTTTTCAGCTCGTTGACTGAAACAATTGGGAATACGTTTCGACCACATTTCACAGATTTGCAAGCTCTTCTTCTGAAATGCTTGCAGGATGAGACAAGCAACCGTGTCAGAGTTGCTGCACTCAAGGCAGTGGGGTCTTTTCTAGAATTCACTCTTGATGGGACCGAAGTGGTCAAGTTTCGTGAATTCATTCCCAGCATTTTAAATGTATCAAGACAATGCCTTGCTGCTGGCGAAGAGGATGTTGCTGTAATTGCTTTTGAGATTTTTGACGAGTTGATTGAATCTCCTGCCCCTCTTCTTGGGGAGTCTATTAAATCCATTGTGCAGTTCTCTCTTGAAGTTTGCTCAAGTCAAACTTTGGAGTCTAACACTCGTCATCAGGCAATCCAAATAATCTCATGGCTAGCAAAGTATAAATCCAAATCCCTTAAAAAGTATAAGCTCATCATTCCTATTCTGCAAATTATGTGCCCATTGCTTGCCGAATCAACTAATGGAGATGAAGATGATGATCTTGCTTCGGATCGAGCTGCTGCAGAAGTTATTGACACTATGGCTTTGAATATACCGAAGCAAGTCTTCAGTCCTGTTCTCGAATTTGCTTCTTTAAGCAGTCAGAATGCAAATCCCAAGTATAGGGAAGCTTCTGTTACTGCTTTAGGTGTCATTTCAGAGGGTTGTTTGGATTTGATGAAAGATAAGATGGAACCAGTTCTTCATGTTGTTTTAGGTGCTTTGAGAGATCCTGAGGAAATGGTCAGGGGAGCTGCCTCCTTTGCCTTGGGTCAGTTTGCTGAGCATTTACAGCCTGAAATTGTATCTCACTATGAAAGTGTACTACCCTGCATTTTGAATGCCCTTGAGGATGCATCTGACGAAGTGAAGGAAAAGTCATATTATGCTTTGGCTGCATTTTGTGAGAACATGGGTGAGGAAATACTTCCATTCCTTGATCCCTTGATGGGGAAACTACTAGGGGCTCTCCATAGCAGCCCTCGTAATTTGCAGGAGACATGCATGTCTGCAATTGGTTCAGTTGCTTCTGCTGCAGAACAAGCCTTTGTTCCATATGCCGAAAGGGTTTTGGAGTTGATGAAGAGTTTCTTGGTGCTTACTAATGATGAGGATCTCTGTTCACGAGCAAGAGCTACTGAATTAGTTGGAATAGTTGCGATGTCTGTGGGGAGAACTGGGATGGAACCAATTTTGCCCCCTTATATAGAAGCTGCAATTTCTGGTTTTGGATTGGAATTTAGTGAGCTTCGAGAATATACTCATGGATTCTTCAGTAACGTTGCAGAAATTTTGGATGAAGGTTTTATACAGTATCTTCCTCATGTTGTCCCCCTGGCATTTTCCTCCTGCAATCTTGATGATGGCTCTGCAGTGGACATCGATGAGTCTGATGACGAAAATATTAATGGATTTGGTGGAGTTTCATCCGATGACGAAGCTCATGATGAACCAAGAGTACGAAATATCAGTGTAAGAACAGGAGTTTTGGATGAAAAGGCTGCTGCAACTCAAGCTCTTGGCTTATTTGCGCAGCATACAAAGACTTCATATGGACCCTATTTGGAGGAGTCATTGAAGATTCTAATTAGACACTCAGGCTATTTTCATGAAGATGTTCGGCTTCAGGCAATCATTGCCTTGAAACATATTTTGACAGCAGCACATGCGATATACCAGAATCATAATGAAGGAGAAGCAAAGGCTAAAGAAGTACTAGAAACTGTCATGAATATTTATATCAAGACTATGACTGAAGATGATGACAAGGAAGTGGTTGCTCAAGCTTGTATGAGCCTTGCTGACATCATCAAAGATTTTGGATATATGGCGATTGAACCCTATATGTCTCGGCTGGTCGATGCTACTTTGGTACTGCTTCAGGAGAAATCAGCTTGTCAGCAGATAGCATCTGATGATGAAATTGATGATGGTGATGTTGAACATGATGAACAGCTCATGGATGCAGTCTCTGACCTGCTCCCTGCCTTTGCCAAGTCAATGGGTCCTCATTTTGCATCTAATTTTGCAAAACTTTTCGGCCCTTTACTGGAATTTGCGAGAGCTTCACGCCCATTGCAAGATCGGACCATGGTTGTTGCCTGCCTTGCTGAAGTTGCTCAGAACATGGGTGCTCCAATTGCAGCATATGTCGATAATGTGATGCCTTTGGTACTCAAGGAACTATCATCCTCAGACTCAACCAATAGGAGGAATGCTGCATTTTGTGTTGGAGAGCTGTGCAGAAATGGGGGTGAGGGGACATTCAAATACTATGGAGATATATTACGTCGGCTTTCCCCACTATTTGGGGAATCTGAGCCAGATAACGCTGTCAGGGATAATGCAGCTGGTGCAGTTGCAAGAATGATAATGGTGCACCCGGAGCTTATCCCATTGAATGAGGTACTTCCTGTTTTTTTAAAAGTTCTTCCATTAAAAGAAGATCATGAGGAGTCCATGGCAGTGTACACTTGCATCTCTACTCTTGTTTTATCATCTAATGCTGAGATTCTTTCTCTGGTCCCTGAGTTGGTCGATGTATTTGCTCAAGTTGTGGCATCACCACTTGAAACTACCGAGGTCAAAGCACATGCAGGCAGAGCTTTTTCTCACCTGATTTCAATCTATGGTCATCAAATGCAGCCCCTTCTGAACAATCTCTCCCCTCAACATGCCAATGCCCTTGCTGCATTTGCCCCCAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0017038 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061608 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0140104 GO:0140142

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT IBN_N Vac14_Fab1_bd

Protein Analysis

1049

Amino Acids

115.08

Weight (kDa)

4.85

Isoelectric Point (pI)

48.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	23 - 87	2.7e-15	Importin-beta N-terminal domain
TPR_IPO5	PF25780	93 - 251	4e-33	IPO5-like, TPR repeats
HEAT_GCN1	PF23271	294 - 447	1.7e-06	Stalled ribosome sensor GCN1-like, HEAT repeats
TOR1L1_N	PF24714	317 - 535	7e-11	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	351 - 405	9.2e-08	HEAT-like repeat
TPR_IMB1	PF25574	380 - 514	1.9e-10	Importin subunit beta-1-like, TPR repeats
HEAT_MROH2B_C	PF23227	380 - 517	3.9e-06	MROH2B-like, HEAT repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27640
fragaria_vesca	FvH4_5g29150
malus_domestica	MD08G1233900.v1.1 MD08G1234100.v1.1 MD15G1425400.v1.1
prunus_persica	Prupe.1G571100_v2.0.a1 Prupe.1G571100_v2.0.a1
pyrus_communis	pycom08g20240 pycom15g37710
rosa_chinensis	RchiOBHm_Chr7g0221821
rosa_laevigata	RLG00000002119
rosa_multiflora	Rmu_sc0005834.1_g000014
rosa_roxburghii	Rroxscaffold_3G00237670
rosa_rugosa	Rorug07G0203600
rosa_samantha	Rh7BG335300 Rh7CG362100 Rh7DG342400
rosa_wichuraiana	Rw7G029220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1441
Acc16I	TGCGCA	2 cut(s)	390, 1968
Acc36I	ACCTGC	1 cut(s)	2421
AccB7I	CCANNNNNTGG	1 cut(s)	2744
AccBSI	CCGCTC	1 cut(s)	116
AciI	CCGC	9 cut(s)	61, 68, 85, 114, 133, 138, 168, 181, 278
AclI	AACGTT	2 cut(s)	153, 1716
AclWI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
AcoI	YGGCCR	3 cut(s)	90, 196, 347
AcsI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
AcuI	CTGAAG	6 cut(s)	988, 1693, 2045, 2211, 2300, 2568
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	7 cut(s)	1260, 1896, 2151, 2310, 2610, 2844, 2906
AjnI	CCWGG	1 cut(s)	1770
AjuI	GAANNNNNNNTTGG	2 cut(s)	1511, 1543
AloI	GAACNNNNNNTCC	2 cut(s)	3083, 3115
Alw21I	GWGCWC	3 cut(s)	273, 2572, 2817
Alw26I	GTCTC	4 cut(s)	506, 1427, 2289, 2410
Alw44I	GTGCAC	1 cut(s)	2813
AlwI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
AlwNI	CAGNNNCTG	2 cut(s)	13, 2408
AoxI	GGCC	5 cut(s)	90, 196, 204, 347, 2476
ApaLI	GTGCAC	1 cut(s)	2813
ApoI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
AseI	ATTAAT	1 cut(s)	1842
Asp700I	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
AspLEI	GCGC	2 cut(s)	391, 1969
AspS9I	GGNCC	9 cut(s)	73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
AsuC2I	CCSGG	3 cut(s)	58, 335, 2819
AsuHPI	GGTGA	8 cut(s)	184, 253, 295, 1364, 2381, 2702, 2991, 3041
AsuNHI	GCTAGC	1 cut(s)	826
AvaII	GGWCC	7 cut(s)	73, 109, 582, 1991, 2441, 2523, 2959
AxyI	CCTNAGG	2 cut(s)	102, 1170
BaeGI	GKGCMC	2 cut(s)	896, 2817
BalI	TGGCCA	1 cut(s)	92
BanII	GRGCYC	1 cut(s)	1405
BarI	GAAGNNNNNNTAC	2 cut(s)	1728, 1760
BauI	CACGAG	1 cut(s)	1560
BbsI	GAAGAC	1 cut(s)	994
Bbv12I	GWGCWC	3 cut(s)	273, 2572, 2817
BbvCI	CCTCAGC	1 cut(s)	219
BccI	CCATC	6 cut(s)	572, 1120, 1378, 1612, 1793, 2360
BceAI	ACGGC	1 cut(s)	155
BcgI	CGANNNNNNTGC	2 cut(s)	2963, 2997
BciT130I	CCWGG	1 cut(s)	1772
BcnI	CCSGG	3 cut(s)	58, 335, 2819
BcoDI	GTCTC	4 cut(s)	506, 1427, 2289, 2410
BfaI	CTAG	4 cut(s)	563, 827, 1397, 2153
BfmI	CTRYAG	3 cut(s)	957, 1470, 1806
BfuAI	ACCTGC	1 cut(s)	2421
BglI	GCCNNNNNGGC	1 cut(s)	286
BlpI	GCTNAGC	1 cut(s)	1218
BmcAI	AGTACT	1 cut(s)	2151
Bme1390I	CCNGG	4 cut(s)	58, 335, 1772, 2819
Bme18I	GGWCC	7 cut(s)	73, 109, 582, 1991, 2441, 2523, 2959
BmgT120I	GGNCC	9 cut(s)	73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
BmiI	GGNNCC	7 cut(s)	111, 583, 1131, 1623, 1993, 2442, 2961
BmrFI	CCNGG	4 cut(s)	58, 335, 1772, 2819
BmrI	ACTGGG	2 cut(s)	211, 1623
BmtI	GCTAGC	1 cut(s)	830
BmuI	ACTGGG	2 cut(s)	211, 1623
BpiI	GAAGAC	1 cut(s)	994
BpmI	CTGGAG	2 cut(s)	35, 360
Bpu10I	CCTNAGC	1 cut(s)	219
Bpu1102I	GCTNAGC	1 cut(s)	1218
BpuEI	CTTGAG	8 cut(s)	209, 527, 754, 1304, 1932, 2202, 2597, 2970
BpuMI	CCSGG	3 cut(s)	58, 335, 2819
Bsa29I	ATCGAT	1 cut(s)	1818
BsaBI	GATNNNNATC	3 cut(s)	933, 1548, 3059
BsaHI	GRCGYC	1 cut(s)	54
BsaJI	CCNNGG	6 cut(s)	264, 1203, 1770, 2526, 2895, 3015
BsaXI	ACNNNNNCTCC	2 cut(s)	3083, 3113
Bse118I	RCCGGY	2 cut(s)	194, 280
Bse1I	ACTGG	5 cut(s)	206, 294, 1133, 1618, 2490
Bse21I	CCTNAGG	2 cut(s)	102, 1170
Bse3DI	GCAATG	3 cut(s)	896, 2070, 2510
Bse8I	GATNNNNATC	3 cut(s)	933, 1548, 3059
BseBI	CCWGG	1 cut(s)	1772
BseCI	ATCGAT	1 cut(s)	1818
BseDI	CCNNGG	6 cut(s)	264, 1203, 1770, 2526, 2895, 3015
BseGI	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BseJI	GATNNNNATC	3 cut(s)	933, 1548, 3059
BseMI	GCAATG	3 cut(s)	896, 2070, 2510
BseNI	ACTGG	5 cut(s)	206, 294, 1133, 1618, 2490
BseRI	GAGGAG	4 cut(s)	207, 410, 2018, 2903
BseSI	GKGCMC	2 cut(s)	896, 2817
BseYI	CCCAGC	1 cut(s)	614
BsgI	GTGCAG	4 cut(s)	522, 767, 2698, 2811
BshFI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BshVI	ATCGAT	1 cut(s)	1818
BsiHKAI	GWGCWC	3 cut(s)	273, 2572, 2817
BsiSI	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 2819
BslFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmAI	GTCTC	4 cut(s)	506, 1427, 2289, 2410
BsmFI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
BsmI	GAATGC	3 cut(s)	1048, 1282, 2656
BsnI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
Bsp1286I	GDGCHC	5 cut(s)	273, 896, 1405, 2572, 2817
Bsp1407I	TGTACA	1 cut(s)	2904
Bsp143I	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Bsp1720I	GCTNAGC	1 cut(s)	1218
Bsp19I	CCATGG	3 cut(s)	264, 2526, 2895
BspACI	CCGC	9 cut(s)	61, 68, 85, 114, 133, 138, 168, 181, 278
BspANI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BspDI	ATCGAT	1 cut(s)	1818
BspHI	TCATGA	4 cut(s)	1879, 2044, 2163, 2884
BspLI	GGNNCC	7 cut(s)	111, 583, 1131, 1623, 1993, 2442, 2961
BspMAI	CTGCAG	3 cut(s)	961, 1474, 1810
BspMI	ACCTGC	1 cut(s)	2421
BspOI	GCTAGC	1 cut(s)	830
BspPI	GGATC	5 cut(s)	412, 954, 1160, 1370, 1557
BspQI	GCTCTTC	1 cut(s)	492
BsrBI	CCGCTC	1 cut(s)	116
BsrDI	GCAATG	3 cut(s)	896, 2070, 2510
BsrFI	RCCGGY	2 cut(s)	194, 280
BsrGI	TGTACA	1 cut(s)	2904
BsrI	ACTGG	5 cut(s)	206, 294, 1133, 1618, 2490
BssAI	RCCGGY	2 cut(s)	194, 280
BssECI	CCNNGG	6 cut(s)	264, 1203, 1770, 2526, 2895, 3015
BssMI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	1 cut(s)	1560
BssT1I	CCWWGG	4 cut(s)	264, 1203, 2526, 2895
Bst2BI	CACGAG	1 cut(s)	1560
Bst2UI	CCWGG	1 cut(s)	1772
Bst4CI	ACNGT	4 cut(s)	275, 524, 1749, 2161
Bst6I	CTCTTC	4 cut(s)	492, 651, 723, 1514
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	4 cut(s)	326, 2072, 2102, 2789
BstAUI	TGTACA	1 cut(s)	2904
BstC8I	GCNNGC	9 cut(s)	66, 291, 483, 503, 652, 828, 903, 2539, 3034
BstDSI	CCRYGG	3 cut(s)	264, 2526, 2895
BstF5I	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BstHHI	GCGC	2 cut(s)	391, 1969
BstKTI	GATC	9 cut(s)	192, 420, 937, 949, 1168, 1378, 1552, 2521, 2884
BstMAI	GTCTC	4 cut(s)	506, 1427, 2289, 2410
BstMBI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
BstNI	CCWGG	1 cut(s)	1772
BstNSI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
BstSCI	CCNGG	4 cut(s)	56, 333, 1770, 2817
BstSFI	CTRYAG	3 cut(s)	957, 1470, 1806
BstSLI	GKGCMC	2 cut(s)	896, 2817
BstV2I	GAAGAC	1 cut(s)	994
BstX2I	RGATCY	2 cut(s)	1165, 1549
BstXI	CCANNNNNNTGG	1 cut(s)	2437
BstYI	RGATCY	2 cut(s)	1165, 1549
Bsu15I	ATCGAT	1 cut(s)	1818
Bsu36I	CCTNAGG	2 cut(s)	102, 1170
BsuRI	GGCC	5 cut(s)	92, 198, 206, 349, 2478
BsuTUI	ATCGAT	1 cut(s)	1818
BtgI	CCRYGG	3 cut(s)	264, 2526, 2895
BtgZI	GCGATG	1 cut(s)	1610
BtsCI	GGATG	9 cut(s)	514, 667, 1294, 1623, 1738, 1862, 1933, 2404, 2624
BtsI	GCAGTG	3 cut(s)	555, 1815, 2907
BtsIMutI	CAGTG	6 cut(s)	199, 301, 555, 1815, 1912, 2907
BveI	ACCTGC	1 cut(s)	2421
Cac8I	GCNNGC	9 cut(s)	66, 291, 483, 503, 652, 828, 903, 2539, 3034
CaiI	CAGNNNCTG	2 cut(s)	13, 2408
CciI	TCATGA	4 cut(s)	1879, 2044, 2163, 2884
CfoI	GCGC	2 cut(s)	391, 1969
Cfr10I	RCCGGY	2 cut(s)	194, 280
Cfr13I	GGNCC	9 cut(s)	73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
ClaI	ATCGAT	1 cut(s)	1818
CseI	GACGC	1 cut(s)	62
Csp6I	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
CviQI	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
DpnI	GATC	9 cut(s)	191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
DpnII	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
DraI	TTTAAA	2 cut(s)	624, 2859
DrdI	GACNNNNNNGTC	1 cut(s)	1441
DseDI	GACNNNNNNGTC	1 cut(s)	1441
EaeI	YGGCCR	3 cut(s)	90, 196, 347
Eam1104I	CTCTTC	4 cut(s)	492, 651, 723, 1514
EarI	CTCTTC	4 cut(s)	492, 651, 723, 1514
EciI	GGCGGA	1 cut(s)	267
Eco130I	CCWWGG	4 cut(s)	264, 1203, 2526, 2895
Eco24I	GRGCYC	1 cut(s)	1405
Eco47I	GGWCC	7 cut(s)	73, 109, 582, 1991, 2441, 2523, 2959
Eco57I	CTGAAG	6 cut(s)	988, 1693, 2045, 2211, 2300, 2568
Eco81I	CCTNAGG	2 cut(s)	102, 1170
EcoO109I	RGGNCCY	1 cut(s)	2441
EcoRI	GAATTC	2 cut(s)	566, 605
EcoRII	CCWGG	1 cut(s)	1770
EcoT14I	CCWWGG	4 cut(s)	264, 1203, 2526, 2895
EcoT22I	ATGCAT	2 cut(s)	1294, 1442
EcoT38I	GRGCYC	1 cut(s)	1405
ErhI	CCWWGG	4 cut(s)	264, 1203, 2526, 2895
FalI	AAGNNNNNCTT	8 cut(s)	474, 506, 763, 795, 986, 1018, 1511, 1543
FaqI	GGGAC	7 cut(s)	95, 229, 317, 595, 1751, 2710, 2945
FauI	CCCGC	1 cut(s)	121
FauNDI	CATATG	3 cut(s)	1492, 1987, 2584
FokI	GGATG	9 cut(s)	521, 674, 1301, 1630, 1745, 1849, 1940, 2411, 2611
FriOI	GRGCYC	1 cut(s)	1405
FspBI	CTAG	4 cut(s)	563, 827, 1397, 2153
FspI	TGCGCA	2 cut(s)	390, 1968
GlaI	GCGC	2 cut(s)	390, 1968
GsaI	CCCAGC	1 cut(s)	618
GsuI	CTGGAG	2 cut(s)	35, 360
HaeIII	GGCC	5 cut(s)	92, 198, 206, 349, 2478
HapII	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 2819
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	391, 1969
Hin1I	GRCGYC	1 cut(s)	54
Hin6I	GCGC	2 cut(s)	389, 1967
HinP1I	GCGC	2 cut(s)	389, 1967
HincII	GTYRAC	1 cut(s)	435
HindII	GTYRAC	1 cut(s)	435
HindIII	AAGCTT	2 cut(s)	1065, 2220
HpaII	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 2819
HphI	GGTGA	8 cut(s)	184, 253, 295, 1364, 2381, 2702, 2991, 3041
Hpy166II	GTNNAC	7 cut(s)	435, 1259, 1559, 1813, 2815, 2905, 2907
Hpy8I	GTNNAC	7 cut(s)	435, 1259, 1559, 1813, 2815, 2905, 2907
Hpy99I	CGWCG	2 cut(s)	56, 2730
HpyAV	CCTTC	4 cut(s)	1300, 1730, 2120, 3095
HpyCH4III	ACNGT	4 cut(s)	275, 524, 1749, 2161
HpyCH4IV	ACGT	4 cut(s)	153, 455, 1716, 2725
HpySE526I	ACGT	4 cut(s)	153, 455, 1716, 2725
Hsp92I	GRCGYC	1 cut(s)	54
HspAI	GCGC	2 cut(s)	389, 1967
Kzo9I	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
LguI	GCTCTTC	1 cut(s)	492
LmnI	GCTCC	7 cut(s)	16, 268, 397, 1187, 2421, 2575, 2821
MaeI	CTAG	4 cut(s)	563, 827, 1397, 2153
MaeII	ACGT	4 cut(s)	153, 455, 1716, 2725
MaeIII	GTNAC	2 cut(s)	1072, 1712
MalI	GATC	9 cut(s)	191, 419, 936, 948, 1167, 1377, 1551, 2520, 2883
MbiI	CCGCTC	1 cut(s)	116
MboI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
MfeI	CAATTG	3 cut(s)	444, 1449, 2574
MflI	RGATCY	2 cut(s)	1165, 1549
MhlI	GDGCHC	5 cut(s)	273, 896, 1405, 2572, 2817
MlsI	TGGCCA	1 cut(s)	92
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
MmeI	TCCRAC	2 cut(s)	1564, 2647
Mox20I	TGGCCA	1 cut(s)	92
Mph1103I	ATGCAT	2 cut(s)	1294, 1442
MroXI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	8 cut(s)	81, 623, 735, 852, 1031, 1842, 2858, 2873
MslI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
Msp20I	TGGCCA	1 cut(s)	92
MspA1I	CMGCKG	1 cut(s)	2786
MspI	CCGG	7 cut(s)	44, 58, 195, 281, 335, 350, 2819
MspR9I	CCNGG	4 cut(s)	58, 335, 1772, 2819
MunI	CAATTG	3 cut(s)	444, 1449, 2574
Mva1269I	GAATGC	3 cut(s)	1048, 1282, 2656
MvaI	CCWGG	1 cut(s)	1772
NciI	CCSGG	3 cut(s)	58, 335, 2819
NcoI	CCATGG	3 cut(s)	264, 2526, 2895
NdeI	CATATG	3 cut(s)	1492, 1987, 2584
NdeII	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
NheI	GCTAGC	1 cut(s)	826
NlaIV	GGNNCC	7 cut(s)	111, 583, 1131, 1623, 1993, 2442, 2961
NmeAIII	GCCGAG	1 cut(s)	2266
NsbI	TGCGCA	2 cut(s)	390, 1968
NsiI	ATGCAT	2 cut(s)	1294, 1442
NspI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
PagI	TCATGA	4 cut(s)	1879, 2044, 2163, 2884
PciSI	GCTCTTC	1 cut(s)	492
PctI	GAATGC	3 cut(s)	1048, 1282, 2656
PdmI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
PfeI	GAWTC	7 cut(s)	704, 908, 1704, 2017, 2116, 2750, 2947
PflMI	CCANNNNNTGG	1 cut(s)	2744
PleI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpsI	GAGTC	7 cut(s)	139, 736, 793, 1831, 2014, 2627, 2899
PpuMI	RGGWCCY	1 cut(s)	2441
PshBI	ATTAAT	1 cut(s)	1842
Psp1406I	AACGTT	2 cut(s)	153, 1716
Psp5II	RGGWCCY	1 cut(s)	2441
Psp6I	CCWGG	1 cut(s)	1770
PspFI	CCCAGC	1 cut(s)	614
PspGI	CCWGG	1 cut(s)	1770
PspN4I	GGNNCC	7 cut(s)	111, 583, 1131, 1623, 1993, 2442, 2961
PspPI	GGNCC	9 cut(s)	73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
PspPPI	RGGWCCY	1 cut(s)	2441
PsrI	GAACNNNNNNTAC	2 cut(s)	1878, 1910
PstI	CTGCAG	3 cut(s)	961, 1474, 1810
PstNI	CAGNNNCTG	2 cut(s)	13, 2408
PsuI	RGATCY	2 cut(s)	1165, 1549
PvuII	CAGCTG	1 cut(s)	2786
RsaI	GTAC	7 cut(s)	1260, 1896, 2151, 2310, 2610, 2844, 2906
RsaNI	GTAC	7 cut(s)	1259, 1895, 2150, 2309, 2609, 2843, 2905
RseI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
SapI	GCTCTTC	1 cut(s)	492
SaqAI	TTAA	8 cut(s)	81, 623, 735, 852, 1031, 1842, 2858, 2873
Sau3AI	GATC	9 cut(s)	189, 417, 934, 946, 1165, 1375, 1549, 2518, 2881
Sau96I	GGNCC	9 cut(s)	73, 109, 204, 582, 1991, 2441, 2477, 2523, 2959
ScaI	AGTACT	1 cut(s)	2151
SchI	GAGTC	7 cut(s)	139, 737, 794, 1832, 2015, 2627, 2900
ScrFI	CCNGG	4 cut(s)	58, 335, 1772, 2819
SduI	GDGCHC	5 cut(s)	273, 896, 1405, 2572, 2817
SfcI	CTRYAG	3 cut(s)	957, 1470, 1806
SgrAI	CRCCGGYG	1 cut(s)	280
SinI	GGWCC	7 cut(s)	73, 109, 582, 1991, 2441, 2523, 2959
SmiMI	CAYNNNNRTG	4 cut(s)	263, 2049, 2900, 3114
SmlI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1947, 2217, 2612, 2985
SmoI	CTYRAG	8 cut(s)	224, 542, 769, 1283, 1947, 2217, 2612, 2985
SsiI	CCGC	9 cut(s)	61, 68, 85, 114, 133, 138, 168, 181, 278
SspI	AATATT	2 cut(s)	1840, 2170
SspMI	CTAG	4 cut(s)	563, 827, 1397, 2153
StyD4I	CCNGG	4 cut(s)	56, 333, 1770, 2817
StyI	CCWWGG	4 cut(s)	264, 1203, 2526, 2895
TaaI	ACNGT	4 cut(s)	275, 524, 1749, 2161
TaiI	ACGT	4 cut(s)	156, 458, 1719, 2728
TaqI	TCGA	8 cut(s)	460, 949, 1017, 1687, 1818, 2295, 2589, 2973
TaqII	GACCGA	1 cut(s)	599
TatI	WGTACW	3 cut(s)	1258, 2149, 2904
TauI	GCSGC	2 cut(s)	64, 170
TfiI	GAWTC	7 cut(s)	704, 908, 1704, 2017, 2116, 2750, 2947
Tru1I	TTAA	8 cut(s)	81, 623, 735, 852, 1031, 1842, 2858, 2873
Tru9I	TTAA	8 cut(s)	81, 623, 735, 852, 1031, 1842, 2858, 2873
TscAI	CASTG	6 cut(s)	206, 301, 555, 1815, 1912, 2907
TspRI	CASTG	6 cut(s)	206, 301, 555, 1815, 1912, 2907
Van91I	CCANNNNNTGG	1 cut(s)	2744
VneI	GTGCAC	1 cut(s)	2813
VpaK11BI	GGWCC	7 cut(s)	73, 109, 582, 1991, 2441, 2523, 2959
VspI	ATTAAT	1 cut(s)	1842
XapI	RAATTY	6 cut(s)	566, 605, 1019, 1673, 1725, 2489
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	5 cut(s)	1440, 1444, 2105, 3032, 3113
XmnI	GAANNNNTTC	5 cut(s)	609, 1134, 1362, 1523, 2052
XspI	CTAG	4 cut(s)	563, 827, 1397, 2153
ZrmI	AGTACT	1 cut(s)	2151
Zsp2I	ATGCAT	2 cut(s)	1294, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.