HEAT repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27640 |
| fragaria_vesca | FvH4_5g29150 |
| malus_domestica | MD08G1233900.v1.1 MD08G1234100.v1.1 MD15G1425400.v1.1 |
| prunus_persica | Prupe.1G571100_v2.0.a1 Prupe.1G571100_v2.0.a1 |
| pyrus_communis | pycom08g20240 pycom15g37710 |
| rosa_chinensis | RchiOBHm_Chr7g0221821 |
| rosa_laevigata | RLG00000002119 |
| rosa_multiflora | Rmu_sc0005834.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00237670 |
| rosa_rugosa | Rorug07G0203600 |
| rosa_samantha | Rh7BG335300 Rh7CG362100 Rh7DG342400 |
| rosa_wichuraiana | Rw7G029220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 138 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1441 |
| Acc16I | TGCGCA | 2 cut(s) | 134, 3108 |
| Acc36I | ACCTGC | 1 cut(s) | 138 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2579 |
| AccI | GTMKAC | 1 cut(s) | 1694 |
| AccII | CGCG | 2 cut(s) | 2495, 2506 |
| AciI | CCGC | 5 cut(s) | 61, 85, 138, 167, 2738 |
| AclWI | GGATC | 6 cut(s) | 412, 1124, 1137, 1160, 1557, 1810 |
| AcoI | YGGCCR | 3 cut(s) | 347, 2941, 3067 |
| AcsI | RAATTY | 8 cut(s) | 566, 605, 684, 1019, 1359, 1522, 1725, 2489 |
| AcuI | CTGAAG | 5 cut(s) | 1391, 2045, 2211, 2568, 3036 |
| AfaI | GTAC | 9 cut(s) | 123, 1260, 1676, 1767, 2025, 2310, 2379, 2610, 2844 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 722, 1385, 2579, 2646, 2744, 2968 |
| AflIII | ACRYGT | 1 cut(s) | 794 |
| AgsI | TTSAA | 9 cut(s) | 374, 683, 704, 985, 1276, 2477, 2704, 2860, 3008 |
| AjiI | CACGTC | 1 cut(s) | 797 |
| AjnI | CCWGG | 2 cut(s) | 801, 3051 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1511, 1543 |
| Alw21I | GWGCWC | 5 cut(s) | 273, 391, 521, 2572, 2817 |
| Alw26I | GTCTC | 5 cut(s) | 151, 506, 1246, 1427, 2920 |
| Alw44I | GTGCAC | 2 cut(s) | 387, 2813 |
| AlwI | GGATC | 6 cut(s) | 412, 1124, 1137, 1160, 1557, 1810 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 13, 130, 2408 |
| AoxI | GGCC | 5 cut(s) | 204, 347, 1401, 2941, 3067 |
| ApaI | GGGCCC | 1 cut(s) | 1405 |
| ApaLI | GTGCAC | 2 cut(s) | 387, 2813 |
| ApoI | RAATTY | 8 cut(s) | 566, 605, 684, 1019, 1359, 1522, 1725, 2489 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 609, 1362, 1523, 2052 |
| AspLEI | GCGC | 6 cut(s) | 118, 135, 1157, 2101, 2508, 3109 |
| AspS9I | GGNCC | 6 cut(s) | 73, 204, 1401, 1402, 1991, 2441 |
| AsuC2I | CCSGG | 1 cut(s) | 335 |
| AsuHPI | GGTGA | 8 cut(s) | 253, 791, 1364, 2608, 2702, 2726, 2991, 3041 |
| AsuNHI | GCTAGC | 1 cut(s) | 826 |
| AvaII | GGWCC | 3 cut(s) | 73, 1991, 2441 |
| AxyI | CCTNAGG | 2 cut(s) | 102, 1170 |
| BaeGI | GKGCMC | 4 cut(s) | 391, 896, 1405, 2817 |
| BalI | TGGCCA | 2 cut(s) | 2943, 3069 |
| BamHI | GGATCC | 1 cut(s) | 1129 |
| BanII | GRGCYC | 2 cut(s) | 1405, 1890 |
| BauI | CACGAG | 1 cut(s) | 1560 |
| BbsI | GAAGAC | 1 cut(s) | 1985 |
| Bbv12I | GWGCWC | 5 cut(s) | 273, 391, 521, 2572, 2817 |
| BccI | CCATC | 8 cut(s) | 572, 1378, 1612, 1730, 1793, 2389, 2834, 3078 |
| BceAI | ACGGC | 1 cut(s) | 2042 |
| BciT130I | CCWGG | 2 cut(s) | 803, 3053 |
| BcnI | CCSGG | 1 cut(s) | 335 |
| BcoDI | GTCTC | 5 cut(s) | 151, 506, 1246, 1427, 2920 |
| BfaI | CTAG | 6 cut(s) | 615, 827, 2021, 2153, 2957, 3122 |
| BfmI | CTRYAG | 2 cut(s) | 957, 1806 |
| BfoI | RGCGCY | 1 cut(s) | 1158 |
| BfuAI | ACCTGC | 1 cut(s) | 138 |
| BlpI | GCTNAGC | 1 cut(s) | 1218 |
| BmcAI | AGTACT | 1 cut(s) | 2610 |
| Bme1390I | CCNGG | 3 cut(s) | 335, 803, 3053 |
| Bme18I | GGWCC | 3 cut(s) | 73, 1991, 2441 |
| BmgBI | CACGTC | 1 cut(s) | 797 |
| BmgT120I | GGNCC | 6 cut(s) | 73, 204, 1401, 1402, 1991, 2441 |
| BmiI | GGNNCC | 6 cut(s) | 1131, 1402, 1403, 1623, 1993, 2442 |
| BmrFI | CCNGG | 3 cut(s) | 335, 803, 3053 |
| BmrI | ACTGGG | 3 cut(s) | 211, 1406, 1623 |
| BmtI | GCTAGC | 1 cut(s) | 830 |
| BmuI | ACTGGG | 3 cut(s) | 211, 1406, 1623 |
| BpiI | GAAGAC | 1 cut(s) | 1985 |
| BpmI | CTGGAG | 4 cut(s) | 35, 264, 360, 927 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2142, 2556 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1218 |
| BpuEI | CTTGAG | 6 cut(s) | 527, 754, 1304, 1932, 2202, 2970 |
| BpuMI | CCSGG | 1 cut(s) | 335 |
| Bsa29I | ATCGAT | 1 cut(s) | 1818 |
| BsaBI | GATNNNNATC | 2 cut(s) | 933, 1548 |
| BsaJI | CCNNGG | 2 cut(s) | 264, 2285 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 722, 1385, 2579, 2646, 2744, 2968 |
| Bse118I | RCCGGY | 1 cut(s) | 2786 |
| Bse1I | ACTGG | 7 cut(s) | 18, 206, 281, 843, 1133, 1401, 1618 |
| Bse21I | CCTNAGG | 2 cut(s) | 102, 1170 |
| Bse3DI | GCAATG | 2 cut(s) | 896, 1602 |
| Bse8I | GATNNNNATC | 2 cut(s) | 933, 1548 |
| BseBI | CCWGG | 2 cut(s) | 803, 3053 |
| BseCI | ATCGAT | 1 cut(s) | 1818 |
| BseDI | CCNNGG | 2 cut(s) | 264, 2285 |
| BseGI | GGATG | 7 cut(s) | 514, 589, 870, 1623, 1738, 2345, 2826 |
| BseJI | GATNNNNATC | 2 cut(s) | 933, 1548 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 722, 1385, 2579, 2646, 2744, 2968 |
| BseMI | GCAATG | 2 cut(s) | 896, 1602 |
| BseMII | CTCAG | 8 cut(s) | 116, 170, 233, 1161, 1209, 2046, 2570, 2745 |
| BseNI | ACTGG | 7 cut(s) | 18, 206, 281, 843, 1133, 1401, 1618 |
| BseRI | GAGGAG | 1 cut(s) | 207 |
| BseSI | GKGCMC | 4 cut(s) | 391, 896, 1405, 2817 |
| BsgI | GTGCAG | 3 cut(s) | 522, 696, 2811 |
| Bsh1236I | CGCG | 2 cut(s) | 2495, 2506 |
| BshFI | GGCC | 5 cut(s) | 206, 349, 1403, 2943, 3069 |
| BshVI | ATCGAT | 1 cut(s) | 1818 |
| BsiHKAI | GWGCWC | 5 cut(s) | 273, 391, 521, 2572, 2817 |
| BsiSI | CCGG | 4 cut(s) | 44, 335, 350, 2787 |
| BslFI | GGGAC | 4 cut(s) | 229, 317, 2710, 2945 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 722, 1385, 2579, 2646, 2744, 2968 |
| BsmAI | GTCTC | 5 cut(s) | 151, 506, 1246, 1427, 2920 |
| BsmBI | CGTCTC | 2 cut(s) | 506, 2920 |
| BsmFI | GGGAC | 4 cut(s) | 229, 317, 2710, 2945 |
| BsmI | GAATGC | 4 cut(s) | 1048, 1282, 1481, 2656 |
| BsnI | GGCC | 5 cut(s) | 206, 349, 1403, 2943, 3069 |
| Bsp120I | GGGCCC | 1 cut(s) | 1401 |
| Bsp1286I | GDGCHC | 8 cut(s) | 273, 391, 521, 896, 1405, 1890, 2572, 2817 |
| Bsp1407I | TGTACA | 1 cut(s) | 2377 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1218 |
| Bsp19I | CCATGG | 1 cut(s) | 264 |
| Bsp68I | TCGCGA | 1 cut(s) | 2495 |
| BspACI | CCGC | 5 cut(s) | 61, 85, 138, 167, 2738 |
| BspANI | GGCC | 5 cut(s) | 206, 349, 1403, 2943, 3069 |
| BspCNI | CTCAG | 8 cut(s) | 115, 171, 232, 1162, 1210, 2045, 2569, 2746 |
| BspDI | ATCGAT | 1 cut(s) | 1818 |
| BspFNI | CGCG | 2 cut(s) | 2495, 2506 |
| BspHI | TCATGA | 4 cut(s) | 574, 1879, 2044, 2884 |
| BspLI | GGNNCC | 6 cut(s) | 1131, 1402, 1403, 1623, 1993, 2442 |
| BspMAI | CTGCAG | 2 cut(s) | 961, 1810 |
| BspMI | ACCTGC | 1 cut(s) | 138 |
| BspOI | GCTAGC | 1 cut(s) | 830 |
| BspPI | GGATC | 6 cut(s) | 412, 1124, 1137, 1160, 1557, 1810 |
| BspQI | GCTCTTC | 1 cut(s) | 492 |
| BsrDI | GCAATG | 2 cut(s) | 896, 1602 |
| BsrFI | RCCGGY | 1 cut(s) | 2786 |
| BsrGI | TGTACA | 1 cut(s) | 2377 |
| BsrI | ACTGG | 7 cut(s) | 18, 206, 281, 843, 1133, 1401, 1618 |
| BssAI | RCCGGY | 1 cut(s) | 2786 |
| BssECI | CCNNGG | 2 cut(s) | 264, 2285 |
| BssNAI | GTATAC | 1 cut(s) | 1695 |
| BssSI | CACGAG | 1 cut(s) | 1560 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst1107I | GTATAC | 1 cut(s) | 1695 |
| Bst2BI | CACGAG | 1 cut(s) | 1560 |
| Bst2UI | CCWGG | 2 cut(s) | 803, 3053 |
| Bst4CI | ACNGT | 4 cut(s) | 1679, 1749, 2161, 3063 |
| Bst6I | CTCTTC | 3 cut(s) | 492, 723, 2883 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 326, 1469, 2789 |
| BstAUI | TGTACA | 1 cut(s) | 2377 |
| BstDSI | CCRYGG | 1 cut(s) | 264 |
| BstF5I | GGATG | 7 cut(s) | 514, 589, 870, 1623, 1738, 2345, 2826 |
| BstFNI | CGCG | 2 cut(s) | 2495, 2506 |
| BstH2I | RGCGCY | 1 cut(s) | 1158 |
| BstHHI | GCGC | 6 cut(s) | 118, 135, 1157, 2101, 2508, 3109 |
| BstMAI | GTCTC | 5 cut(s) | 151, 506, 1246, 1427, 2920 |
| BstNI | CCWGG | 2 cut(s) | 803, 3053 |
| BstNSI | RCATGY | 4 cut(s) | 1001, 1440, 1444, 3113 |
| BstSCI | CCNGG | 3 cut(s) | 333, 801, 3051 |
| BstSFI | CTRYAG | 2 cut(s) | 957, 1806 |
| BstSLI | GKGCMC | 4 cut(s) | 391, 896, 1405, 2817 |
| BstUI | CGCG | 2 cut(s) | 2495, 2506 |
| BstV2I | GAAGAC | 1 cut(s) | 1985 |
| BstX2I | RGATCY | 4 cut(s) | 1129, 1165, 1549, 1802 |
| BstYI | RGATCY | 4 cut(s) | 1129, 1165, 1549, 1802 |
| BstZ17I | GTATAC | 1 cut(s) | 1695 |
| Bsu15I | ATCGAT | 1 cut(s) | 1818 |
| Bsu36I | CCTNAGG | 2 cut(s) | 102, 1170 |
| BsuRI | GGCC | 5 cut(s) | 206, 349, 1403, 2943, 3069 |
| BsuTUI | ATCGAT | 1 cut(s) | 1818 |
| BtgI | CCRYGG | 1 cut(s) | 264 |
| BtrI | CACGTC | 1 cut(s) | 797 |
| BtsCI | GGATG | 7 cut(s) | 514, 589, 870, 1623, 1738, 2345, 2826 |
| BtsI | GCAGTG | 5 cut(s) | 555, 644, 1815, 2510, 2799 |
| BtuMI | TCGCGA | 1 cut(s) | 2495 |
| BveI | ACCTGC | 1 cut(s) | 138 |
| CaiI | CAGNNNCTG | 3 cut(s) | 13, 130, 2408 |
| CciI | TCATGA | 4 cut(s) | 574, 1879, 2044, 2884 |
| CfoI | GCGC | 6 cut(s) | 118, 135, 1157, 2101, 2508, 3109 |
| Cfr10I | RCCGGY | 1 cut(s) | 2786 |
| Cfr13I | GGNCC | 6 cut(s) | 73, 204, 1401, 1402, 1991, 2441 |
| ClaI | ATCGAT | 1 cut(s) | 1818 |
| CseI | GACGC | 5 cut(s) | 62, 1182, 2408, 2642, 2902 |
| CsiI | ACCWGGT | 1 cut(s) | 3051 |
| Csp6I | GTAC | 9 cut(s) | 122, 1259, 1675, 1766, 2024, 2309, 2378, 2609, 2843 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1584, 1619 |
| CviQI | GTAC | 9 cut(s) | 122, 1259, 1675, 1766, 2024, 2309, 2378, 2609, 2843 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1441 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1441 |
| EaeI | YGGCCR | 3 cut(s) | 347, 2941, 3067 |
| Eam1104I | CTCTTC | 3 cut(s) | 492, 723, 2883 |
| EarI | CTCTTC | 3 cut(s) | 492, 723, 2883 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco24I | GRGCYC | 2 cut(s) | 1405, 1890 |
| Eco47I | GGWCC | 3 cut(s) | 73, 1991, 2441 |
| Eco57I | CTGAAG | 5 cut(s) | 1391, 2045, 2211, 2568, 3036 |
| Eco81I | CCTNAGG | 2 cut(s) | 102, 1170 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1401, 1402, 2441 |
| EcoRI | GAATTC | 2 cut(s) | 566, 605 |
| EcoRII | CCWGG | 2 cut(s) | 801, 3051 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| EcoT22I | ATGCAT | 1 cut(s) | 1442 |
| EcoT38I | GRGCYC | 2 cut(s) | 1405, 1890 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| Esp3I | CGTCTC | 2 cut(s) | 506, 2920 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 474, 506 |
| FaqI | GGGAC | 4 cut(s) | 229, 317, 2710, 2945 |
| FauI | CCCGC | 1 cut(s) | 2745 |
| FauNDI | CATATG | 2 cut(s) | 1492, 1987 |
| FblI | GTMKAC | 1 cut(s) | 1694 |
| FokI | GGATG | 7 cut(s) | 521, 596, 857, 1630, 1745, 2332, 2813 |
| FriOI | GRGCYC | 2 cut(s) | 1405, 1890 |
| FspBI | CTAG | 6 cut(s) | 615, 827, 2021, 2153, 2957, 3122 |
| FspI | TGCGCA | 2 cut(s) | 134, 3108 |
| GlaI | GCGC | 6 cut(s) | 117, 134, 1156, 2100, 2507, 3108 |
| GsuI | CTGGAG | 4 cut(s) | 35, 264, 360, 927 |
| HaeII | RGCGCY | 1 cut(s) | 1158 |
| HaeIII | GGCC | 5 cut(s) | 206, 349, 1403, 2943, 3069 |
| HapII | CCGG | 4 cut(s) | 44, 335, 350, 2787 |
| HgaI | GACGC | 5 cut(s) | 62, 1182, 2408, 2642, 2902 |
| HhaI | GCGC | 6 cut(s) | 118, 135, 1157, 2101, 2508, 3109 |
| Hin6I | GCGC | 6 cut(s) | 116, 133, 1155, 2099, 2506, 3107 |
| HinP1I | GCGC | 6 cut(s) | 116, 133, 1155, 2099, 2506, 3107 |
| HindIII | AAGCTT | 2 cut(s) | 1065, 2220 |
| HpaII | CCGG | 4 cut(s) | 44, 335, 350, 2787 |
| HphI | GGTGA | 8 cut(s) | 253, 791, 1364, 2608, 2702, 2726, 2991, 3041 |
| Hpy166II | GTNNAC | 8 cut(s) | 389, 1259, 1559, 1695, 1813, 2110, 2729, 2815 |
| Hpy8I | GTNNAC | 8 cut(s) | 389, 1259, 1559, 1695, 1813, 2110, 2729, 2815 |
| Hpy99I | CGWCG | 1 cut(s) | 56 |
| HpyAV | CCTTC | 6 cut(s) | 1300, 1415, 1927, 2120, 2423, 2854 |
| HpyCH4III | ACNGT | 4 cut(s) | 1679, 1749, 2161, 3063 |
| HpyCH4IV | ACGT | 3 cut(s) | 303, 762, 796 |
| HpySE526I | ACGT | 3 cut(s) | 303, 762, 796 |
| HspAI | GCGC | 6 cut(s) | 116, 133, 1155, 2099, 2506, 3107 |
| LguI | GCTCTTC | 1 cut(s) | 492 |
| LmnI | GCTCC | 5 cut(s) | 16, 268, 946, 2575, 3139 |
| MabI | ACCWGGT | 1 cut(s) | 3051 |
| MaeI | CTAG | 6 cut(s) | 615, 827, 2021, 2153, 2957, 3122 |
| MaeII | ACGT | 3 cut(s) | 303, 762, 796 |
| MaeIII | GTNAC | 3 cut(s) | 9, 797, 1072 |
| MfeI | CAATTG | 2 cut(s) | 161, 2574 |
| MflI | RGATCY | 4 cut(s) | 1129, 1165, 1549, 1802 |
| MhlI | GDGCHC | 8 cut(s) | 273, 391, 521, 896, 1405, 1890, 2572, 2817 |
| MlsI | TGGCCA | 2 cut(s) | 2943, 3069 |
| MluNI | TGGCCA | 2 cut(s) | 2943, 3069 |
| MlyI | GAGTC | 3 cut(s) | 1832, 1902, 2900 |
| MmeI | TCCRAC | 3 cut(s) | 1107, 1564, 2647 |
| Mox20I | TGGCCA | 2 cut(s) | 2943, 3069 |
| Mph1103I | ATGCAT | 1 cut(s) | 1442 |
| MroXI | GAANNNNTTC | 4 cut(s) | 609, 1362, 1523, 2052 |
| MscI | TGGCCA | 2 cut(s) | 2943, 3069 |
| MslI | CAYNNNNRTG | 3 cut(s) | 263, 2049, 3114 |
| Msp20I | TGGCCA | 2 cut(s) | 2943, 3069 |
| MspA1I | CMGCKG | 3 cut(s) | 650, 1940, 2338 |
| MspI | CCGG | 4 cut(s) | 44, 335, 350, 2787 |
| MspR9I | CCNGG | 3 cut(s) | 335, 803, 3053 |
| MunI | CAATTG | 2 cut(s) | 161, 2574 |
| Mva1269I | GAATGC | 4 cut(s) | 1048, 1282, 1481, 2656 |
| MvaI | CCWGG | 2 cut(s) | 803, 3053 |
| MvnI | CGCG | 2 cut(s) | 2495, 2506 |
| NciI | CCSGG | 1 cut(s) | 335 |
| NcoI | CCATGG | 1 cut(s) | 264 |
| NdeI | CATATG | 2 cut(s) | 1492, 1987 |
| NheI | GCTAGC | 1 cut(s) | 826 |
| NlaIV | GGNNCC | 6 cut(s) | 1131, 1402, 1403, 1623, 1993, 2442 |
| NmeAIII | GCCGAG | 2 cut(s) | 37, 2266 |
| NmuCI | GTSAC | 2 cut(s) | 9, 797 |
| NruI | TCGCGA | 1 cut(s) | 2495 |
| NsbI | TGCGCA | 2 cut(s) | 134, 3108 |
| NsiI | ATGCAT | 1 cut(s) | 1442 |
| NspI | RCATGY | 4 cut(s) | 1001, 1440, 1444, 3113 |
| PaeI | GCATGC | 1 cut(s) | 3113 |
| PagI | TCATGA | 4 cut(s) | 574, 1879, 2044, 2884 |
| PaqCI | CACCTGC | 1 cut(s) | 138 |
| PciSI | GCTCTTC | 1 cut(s) | 492 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 827 |
| PctI | GAATGC | 4 cut(s) | 1048, 1282, 1481, 2656 |
| PdmI | GAANNNNTTC | 4 cut(s) | 609, 1362, 1523, 2052 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2579 |
| PleI | GAGTC | 3 cut(s) | 1831, 1901, 2899 |
| PpsI | GAGTC | 3 cut(s) | 1831, 1901, 2899 |
| PpuMI | RGGWCCY | 1 cut(s) | 2441 |
| Psp5II | RGGWCCY | 1 cut(s) | 2441 |
| Psp6I | CCWGG | 2 cut(s) | 801, 3051 |
| PspGI | CCWGG | 2 cut(s) | 801, 3051 |
| PspN4I | GGNNCC | 6 cut(s) | 1131, 1402, 1403, 1623, 1993, 2442 |
| PspOMI | GGGCCC | 1 cut(s) | 1401 |
| PspPI | GGNCC | 6 cut(s) | 73, 204, 1401, 1402, 1991, 2441 |
| PspPPI | RGGWCCY | 1 cut(s) | 2441 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1614, 1646 |
| PstI | CTGCAG | 2 cut(s) | 961, 1810 |
| PstNI | CAGNNNCTG | 3 cut(s) | 13, 130, 2408 |
| PsuI | RGATCY | 4 cut(s) | 1129, 1165, 1549, 1802 |
| PvuII | CAGCTG | 3 cut(s) | 650, 1940, 2338 |
| RruI | TCGCGA | 1 cut(s) | 2495 |
| RsaI | GTAC | 9 cut(s) | 123, 1260, 1676, 1767, 2025, 2310, 2379, 2610, 2844 |
| RsaNI | GTAC | 9 cut(s) | 122, 1259, 1675, 1766, 2024, 2309, 2378, 2609, 2843 |
| RseI | CAYNNNNRTG | 3 cut(s) | 263, 2049, 3114 |
| SapI | GCTCTTC | 1 cut(s) | 492 |
| Sau96I | GGNCC | 6 cut(s) | 73, 204, 1401, 1402, 1991, 2441 |
| ScaI | AGTACT | 1 cut(s) | 2610 |
| SchI | GAGTC | 3 cut(s) | 1832, 1902, 2900 |
| ScrFI | CCNGG | 3 cut(s) | 335, 803, 3053 |
| SduI | GDGCHC | 8 cut(s) | 273, 391, 521, 896, 1405, 1890, 2572, 2817 |
| SexAI | ACCWGGT | 1 cut(s) | 3051 |
| SfcI | CTRYAG | 2 cut(s) | 957, 1806 |
| SinI | GGWCC | 3 cut(s) | 73, 1991, 2441 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 263, 2049, 3114 |
| SmlI | CTYRAG | 6 cut(s) | 542, 769, 1283, 1947, 2217, 2985 |
| SmoI | CTYRAG | 6 cut(s) | 542, 769, 1283, 1947, 2217, 2985 |
| SphI | GCATGC | 1 cut(s) | 3113 |
| SsiI | CCGC | 5 cut(s) | 61, 85, 138, 167, 2738 |
| SspI | AATATT | 1 cut(s) | 2708 |
| SspMI | CTAG | 6 cut(s) | 615, 827, 2021, 2153, 2957, 3122 |
| StyD4I | CCNGG | 3 cut(s) | 333, 801, 3051 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 4 cut(s) | 1679, 1749, 2161, 3063 |
| TaiI | ACGT | 3 cut(s) | 306, 765, 799 |
| TaqI | TCGA | 6 cut(s) | 460, 601, 911, 949, 1818, 2589 |
| TatI | WGTACW | 4 cut(s) | 1258, 1674, 2377, 2608 |
| TauI | GCSGC | 3 cut(s) | 64, 88, 170 |
| TseFI | GTSAC | 2 cut(s) | 9, 797 |
| Tsp45I | GTSAC | 2 cut(s) | 9, 797 |
| TspGWI | ACGGA | 1 cut(s) | 1368 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2579 |
| VneI | GTGCAC | 2 cut(s) | 387, 2813 |
| VpaK11BI | GGWCC | 3 cut(s) | 73, 1991, 2441 |
| XapI | RAATTY | 8 cut(s) | 566, 605, 684, 1019, 1359, 1522, 1725, 2489 |
| XbaI | TCTAGA | 1 cut(s) | 2152 |
| XceI | RCATGY | 4 cut(s) | 1001, 1440, 1444, 3113 |
| XmiI | GTMKAC | 1 cut(s) | 1694 |
| XmnI | GAANNNNTTC | 4 cut(s) | 609, 1362, 1523, 2052 |
| XspI | CTAG | 6 cut(s) | 615, 827, 2021, 2153, 2957, 3122 |
| ZrmI | AGTACT | 1 cut(s) | 2610 |
| Zsp2I | ATGCAT | 1 cut(s) | 1442 |