FvH4_5g31710

Patellin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012299
Physical Location & Seq
Forward (+)
22878883 .. 22883730
4848 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31710.t2

Sequence Viewer

Length: 1629 bp
ATGGCCGACGAAACCCCCACAGCCACCCCGCCACCGGCAGAGTACCCGCCGGTCACGGTGATTGAGTCGGAATCGCCTTCTGTAGCCAAAAACCTCGAGTCTAAACAAGACCCACTTCCACCAGCTCCAATACCAGAAGTGACGGAGTCTGCCAAACAAGAAGAGCCTCCGCTAGAGCTACCTCAGCAGTCTCCTATCGCAACAGCTAAATCCGAGGACGTTTTAGTTGTTGGGTCTCTGCAAGCCAAGGAGGGTGAGGAGCCCACGATTCGGAAATCGGTTCCGCAGTCTCTGATTTCGTTCAAAGAGGAAAGCAACGTAGTGGCAGATCTGTCAGATTCCGAAAGAAAAGCTCTTCAGGAGTTTAAGCAGCTTGTGCAGGAAGCTCTCAACACTCACCAGTTCAGTTCTCCGAAACAAGAAGTGCGAGAGACCAAGGAAAAAGAAAAGCCAGCTCCCACAACTGAACAAGAAGAAGAAACCCCTGTTTCGGAATCCGAAACAAAGCCACTACATGAGCCCAAAATCGAAGAGAACCCGGTGAAGGAAGCAGAGGAAGTGGCTAAGGAAGCATCACAAACCGCGATTTCTCCGGAGGAGGTTTCGATTTGGGGTGTTCCTCTGCTCAAGGATGACCGGAGCGATGTGATTCTTCTCAAGTTTCTGAGGGCTAGGGACTTCAAGGTGAAAGATGCTTTTGTTATGCTTCGGAACACGATCCACTGGAGGAAGCAGTTTGGGATCGATGCTCTTGTGGAGGAAGATCTCGGTGATGACTTAGAAAAAGTGGTGTTTATGCATGGGTATGATAGGGATGGTCACCCTGTGTGTTACAATGTGTTTGGGGAGTTTCAGAACAAGGAGCTGTATCAGAAGACGTTTTTGGATGAGGAAAAGAGAACCAAGTTTCTCCGGTGGCGGGTTCAGTTCTTGGAGAGAAGTATCAGGAAGCTGGATTTCAGGCCTGGTGGTGTTTGCACTATTTTTCAGGTTAATGATCTTAAGAATTCTCCTGGCCCTGCAAAAAGTGAGCTTCGTTTGGCCACCAAACAAGCCCTTCAGTTGCTTCAGGACAATTATCCCGAGTTTGTAGCCAAACAGGTGTTTATCAATGCTCCATGGTGGTATCTTGCATTCTACACATTGATCAGTCCCTTCTTGACACAAAGGACCAAAAGCAAGTTTGTGTTTGCTAGCCCAGCCAAATCAGCAGATACCCTTTTCAAGTACATTTCTGCTGAGCATGTTCCCATACAATATGGGGGTTTGAGTGTGGATTACTGTGAGTGCAACCCAGAGTTCACGATTGCTGATCCAGTCGCAGAAGTAACCATCAAACCTGGAACTAAGAAGACTGTGGAGATTATAATTTATGAGAAGTGCACCATCGTGTGGGAACTCCGGGTAGTTGGGTGGGAGGTGAGCTATGGAGCTGAATTTGTTCCCGACTCTCAAGGTGCATATACACTGATCATTCAAAAAGCCACAAAGATGAACCCAACTGATGAACCAGTGCTGCATCACCGCTTCAAAGTCAGCGAACTGGGTAAAATATTGCTCACAATTGACAACCCAACCTCAAAGAAGAAAAGGCTTTTGTACAGGTTCAAAATCGAACCCTCCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

543

Amino Acids

61.62

Weight (kDa)

5.23

Isoelectric Point (pI)

58.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 187 - 238 4.8e-10 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 262 - 422 6.2e-31 CRAL/TRIO domain
GOLD_PATL1_C PF25099 446 - 530 9.5e-37 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012299)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72160
fragaria_vesca FvH4_5g31710 FvH4_5g31710
malus_domestica MD08G1218000.v1.1 MD15G1405900.v1.1
prunus_persica Prupe.1G555300_v2.0.a1
pyrus_communis pycom08g18900 pycom15g36270
rosa_chinensis RchiOBHm_Chr7g0227591
rosa_laevigata RLG00000001634
rosa_multiflora Rmu_sc0001772.1_g000008
rosa_roxburghii Rroxscaffold_3G00232020
rosa_rugosa Rorug07G0242000 Rorug07G0242100
rosa_samantha Rh7AG395500 Rh7BG377300 Rh7CG414200 Rh7DG391300
rosa_wichuraiana Rw7G032890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1367
AccB7I CCANNNNNTGG 1 cut(s) 1392
AccII CGCG 1 cut(s) 584
AccIII TCCGGA 1 cut(s) 592
AciI CCGC 7 cut(s) 29, 47, 170, 284, 582, 919, 1525
AclWI GGATC 3 cut(s) 712, 749, 1307
AcoI YGGCCR 2 cut(s) 3, 1041
AcsI RAATTY 2 cut(s) 1006, 1436
AcuI CTGAAG 3 cut(s) 341, 1043, 1052
AdeI CACNNNGTG 1 cut(s) 826
AfaI GTAC 3 cut(s) 44, 1229, 1601
AfiI CCNNNNNNNGG 6 cut(s) 34, 270, 490, 544, 919, 1392
AflII CTTAAG 1 cut(s) 1001
AgsI TTSAA 6 cut(s) 304, 682, 1225, 1478, 1531, 1609
AjnI CCWGG 3 cut(s) 964, 1012, 1339
AjuI GAANNNNNNNTTGG 2 cut(s) 866, 898
AleI CACNNNNGTG 1 cut(s) 1388
Alw21I GWGCWC 1 cut(s) 1385
Alw26I GTCTC 4 cut(s) 195, 240, 294, 425
Alw44I GTGCAC 1 cut(s) 1381
AlwI GGATC 3 cut(s) 712, 749, 1307
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 2 cut(s) 95, 1082
Aor13HI TCCGGA 1 cut(s) 592
AoxI GGCC 4 cut(s) 3, 962, 1015, 1041
ApaLI GTGCAC 1 cut(s) 1381
ApeKI GCWGC 2 cut(s) 370, 1516
ApoI RAATTY 2 cut(s) 1006, 1436
Asp700I GAANNNNTTC 1 cut(s) 1440
AspS9I GGNCC 2 cut(s) 1016, 1170
AsuC2I CCSGG 2 cut(s) 539, 1403
AsuHPI GGTGA 9 cut(s) 70, 266, 389, 553, 697, 782, 812, 1432, 1514
AsuNHI GCTAGC 1 cut(s) 1193
AvaI CYCGRG 2 cut(s) 95, 1082
AvaII GGWCC 1 cut(s) 1170
BaeGI GKGCMC 1 cut(s) 1385
BalI TGGCCA 1 cut(s) 1043
BanII GRGCYC 2 cut(s) 264, 522
BbsI GAAGAC 2 cut(s) 881, 1358
Bbv12I GWGCWC 1 cut(s) 1385
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 2 cut(s) 382, 1503
BccI CCATC 3 cut(s) 809, 1340, 1394
BciT130I CCWGG 3 cut(s) 966, 1014, 1341
BclI TGATCA 2 cut(s) 1146, 1470
BcnI CCSGG 2 cut(s) 539, 1403
BcoDI GTCTC 4 cut(s) 195, 240, 294, 425
BfaI CTAG 3 cut(s) 173, 672, 1194
BfmI CTRYAG 1 cut(s) 81
BfrI CTTAAG 1 cut(s) 1001
BglII AGATCT 2 cut(s) 328, 763
BisI GCNGC 2 cut(s) 371, 1517
BlpI GCTNAGC 1 cut(s) 1239
BlsI GCNGC 2 cut(s) 372, 1518
Bme1390I CCNGG 5 cut(s) 539, 966, 1014, 1341, 1403
Bme18I GGWCC 1 cut(s) 1170
BmeT110I CYCGRG 2 cut(s) 95, 1082
BmgT120I GGNCC 2 cut(s) 1016, 1170
BmiI GGNNCC 2 cut(s) 261, 282
BmrFI CCNGG 5 cut(s) 539, 966, 1014, 1341, 1403
BmrI ACTGGG 1 cut(s) 1553
BmsI GCATC 4 cut(s) 581, 682, 736, 1528
BmtI GCTAGC 1 cut(s) 1197
BmuI ACTGGG 1 cut(s) 1553
BpiI GAAGAC 2 cut(s) 881, 1358
BpmI CTGGAG 1 cut(s) 745
Bpu10I CCTNAGC 2 cut(s) 183, 564
Bpu1102I GCTNAGC 1 cut(s) 1239
BpuEI CTTGAG 3 cut(s) 611, 641, 1437
BpuMI CCSGG 2 cut(s) 539, 1403
Bsa29I ATCGAT 1 cut(s) 744
BsaI GGTCTC 2 cut(s) 240, 425
BsaJI CCNNGG 4 cut(s) 213, 246, 435, 1118
BsaWI WCCGGW 3 cut(s) 592, 636, 912
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 270, 490, 544, 919, 1392
Bse118I RCCGGY 2 cut(s) 34, 49
Bse1I ACTGG 5 cut(s) 400, 728, 1316, 1511, 1548
BseAI TCCGGA 1 cut(s) 592
BseBI CCWGG 3 cut(s) 966, 1014, 1341
BseCI ATCGAT 1 cut(s) 744
BseDI CCNNGG 4 cut(s) 213, 246, 435, 1118
BseGI GGATG 3 cut(s) 637, 820, 892
BseLI CCNNNNNNNGG 6 cut(s) 34, 270, 490, 544, 919, 1392
BseMII CTCAG 3 cut(s) 197, 656, 1230
BseNI ACTGG 5 cut(s) 400, 728, 1316, 1511, 1548
BseRI GAGGAG 2 cut(s) 272, 611
BseSI GKGCMC 1 cut(s) 1385
BseXI GCAGC 2 cut(s) 382, 1503
BseYI CCCAGC 1 cut(s) 1198
BsgI GTGCAG 1 cut(s) 398
Bsh1236I CGCG 1 cut(s) 584
BshFI GGCC 4 cut(s) 5, 964, 1017, 1043
BshVI ATCGAT 1 cut(s) 744
BsiHKAI GWGCWC 1 cut(s) 1385
BsiHKCI CYCGRG 2 cut(s) 95, 1082
BsiSI CCGG 7 cut(s) 35, 50, 539, 593, 637, 913, 1402
BslFI GGGAC 2 cut(s) 689, 1137
BslI CCNNNNNNNGG 6 cut(s) 34, 270, 490, 544, 919, 1392
BsmAI GTCTC 4 cut(s) 195, 240, 294, 425
BsmFI GGGAC 2 cut(s) 689, 1137
BsmI GAATGC 1 cut(s) 1133
BsnI GGCC 4 cut(s) 5, 964, 1017, 1043
Bso31I GGTCTC 2 cut(s) 240, 425
BsoBI CYCGRG 2 cut(s) 95, 1082
Bsp1286I GDGCHC 3 cut(s) 264, 522, 1385
Bsp13I TCCGGA 1 cut(s) 592
Bsp1407I TGTACA 1 cut(s) 1599
Bsp143I GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
Bsp1720I GCTNAGC 1 cut(s) 1239
Bsp19I CCATGG 1 cut(s) 1118
BspACI CCGC 7 cut(s) 29, 47, 170, 284, 582, 919, 1525
BspANI GGCC 4 cut(s) 5, 964, 1017, 1043
BspCNI CTCAG 3 cut(s) 196, 657, 1231
BspDI ATCGAT 1 cut(s) 744
BspEI TCCGGA 1 cut(s) 592
BspFNI CGCG 1 cut(s) 584
BspLI GGNNCC 2 cut(s) 261, 282
BspOI GCTAGC 1 cut(s) 1197
BspPI GGATC 3 cut(s) 712, 749, 1307
BspQI GCTCTTC 2 cut(s) 156, 360
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 2 cut(s) 240, 425
BsrFI RCCGGY 2 cut(s) 34, 49
BsrGI TGTACA 1 cut(s) 1599
BsrI ACTGG 5 cut(s) 400, 728, 1316, 1511, 1548
BssAI RCCGGY 2 cut(s) 34, 49
BssECI CCNNGG 4 cut(s) 213, 246, 435, 1118
BssMI GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
BssT1I CCWWGG 3 cut(s) 246, 435, 1118
Bst2UI CCWGG 3 cut(s) 966, 1014, 1341
Bst4CI ACNGT 3 cut(s) 58, 1283, 1357
Bst6I CTCTTC 3 cut(s) 156, 360, 525
BstAFI CTTAAG 1 cut(s) 1001
BstAPI GCANNNNNTGC 1 cut(s) 376
BstAUI TGTACA 1 cut(s) 1599
BstC8I GCNNGC 3 cut(s) 243, 453, 1195
BstDEI CTNAG 6 cut(s) 183, 564, 665, 778, 1239, 1347
BstDSI CCRYGG 1 cut(s) 1118
BstEII GGTNACC 1 cut(s) 818
BstF5I GGATG 3 cut(s) 637, 820, 892
BstFNI CGCG 1 cut(s) 584
BstKTI GATC 8 cut(s) 331, 720, 744, 766, 1000, 1149, 1315, 1473
BstMAI GTCTC 4 cut(s) 195, 240, 294, 425
BstMBI GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
BstMWI GCNNNNNNNGC 5 cut(s) 184, 376, 569, 1199, 1208
BstNI CCWGG 3 cut(s) 966, 1014, 1341
BstNSI RCATGY 1 cut(s) 1247
BstPI GGTNACC 1 cut(s) 818
BstSCI CCNGG 5 cut(s) 537, 964, 1012, 1339, 1401
BstSFI CTRYAG 1 cut(s) 81
BstSLI GKGCMC 1 cut(s) 1385
BstUI CGCG 1 cut(s) 584
BstV1I GCAGC 2 cut(s) 382, 1503
BstV2I GAAGAC 2 cut(s) 881, 1358
BstX2I RGATCY 2 cut(s) 328, 763
BstYI RGATCY 2 cut(s) 328, 763
Bsu15I ATCGAT 1 cut(s) 744
BsuRI GGCC 4 cut(s) 5, 964, 1017, 1043
BsuTUI ATCGAT 1 cut(s) 744
BtgI CCRYGG 1 cut(s) 1118
BtgZI GCGATG 1 cut(s) 657
BtsCI GGATG 3 cut(s) 637, 820, 892
BtsIMutI CAGTG 3 cut(s) 721, 1466, 1518
Cac8I GCNNGC 3 cut(s) 243, 453, 1195
CaiI CAGNNNCTG 1 cut(s) 292
Cfr10I RCCGGY 2 cut(s) 34, 49
Cfr13I GGNCC 2 cut(s) 1016, 1170
ClaI ATCGAT 1 cut(s) 744
Csp6I GTAC 3 cut(s) 43, 1228, 1600
CviAII CATG 4 cut(s) 515, 800, 1119, 1244
CviQI GTAC 3 cut(s) 43, 1228, 1600
DdeI CTNAG 6 cut(s) 183, 564, 665, 778, 1239, 1347
DpnI GATC 8 cut(s) 330, 719, 743, 765, 999, 1148, 1314, 1472
DpnII GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
DraIII CACNNNGTG 1 cut(s) 826
EaeI YGGCCR 2 cut(s) 3, 1041
Eam1104I CTCTTC 3 cut(s) 156, 360, 525
EarI CTCTTC 3 cut(s) 156, 360, 525
Eco130I CCWWGG 3 cut(s) 246, 435, 1118
Eco147I AGGCCT 1 cut(s) 964
Eco24I GRGCYC 2 cut(s) 264, 522
Eco31I GGTCTC 2 cut(s) 240, 425
Eco47I GGWCC 1 cut(s) 1170
Eco57I CTGAAG 3 cut(s) 341, 1043, 1052
Eco88I CYCGRG 2 cut(s) 95, 1082
Eco91I GGTNACC 1 cut(s) 818
EcoO65I GGTNACC 1 cut(s) 818
EcoRI GAATTC 1 cut(s) 1006
EcoRII CCWGG 3 cut(s) 964, 1012, 1339
EcoT14I CCWWGG 3 cut(s) 246, 435, 1118
EcoT22I ATGCAT 1 cut(s) 801
EcoT38I GRGCYC 2 cut(s) 264, 522
ErhI CCWWGG 3 cut(s) 246, 435, 1118
FaeI CATG 4 cut(s) 518, 803, 1122, 1247
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FaqI GGGAC 2 cut(s) 689, 1137
FatI CATG 4 cut(s) 514, 799, 1118, 1243
FauI CCCGC 3 cut(s) 36, 54, 912
FbaI TGATCA 2 cut(s) 1146, 1470
Fnu4HI GCNGC 2 cut(s) 371, 1517
FokI GGATG 3 cut(s) 644, 827, 899
FriOI GRGCYC 2 cut(s) 264, 522
Fsp4HI GCNGC 2 cut(s) 371, 1517
FspBI CTAG 3 cut(s) 173, 672, 1194
GluI GCNGC 2 cut(s) 371, 1517
GsaI CCCAGC 1 cut(s) 1202
GsuI CTGGAG 1 cut(s) 745
HaeIII GGCC 4 cut(s) 5, 964, 1017, 1043
HapII CCGG 7 cut(s) 35, 50, 539, 593, 637, 913, 1402
Hin1II CATG 4 cut(s) 518, 803, 1122, 1247
HinfI GANTC 9 cut(s) 65, 71, 98, 146, 268, 338, 494, 649, 1448
HpaII CCGG 7 cut(s) 35, 50, 539, 593, 637, 913, 1402
HphI GGTGA 9 cut(s) 70, 266, 389, 553, 697, 782, 812, 1432, 1514
Hpy166II GTNNAC 2 cut(s) 1302, 1383
Hpy188III TCNNGA 8 cut(s) 359, 593, 946, 1070, 1082, 1159, 1303, 1445
Hpy8I GTNNAC 2 cut(s) 1302, 1383
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 4 cut(s) 87, 538, 1067, 1165
HpyCH4III ACNGT 3 cut(s) 58, 1283, 1357
HpyCH4IV ACGT 3 cut(s) 219, 318, 878
HpyF10VI GCNNNNNNNGC 5 cut(s) 184, 376, 569, 1199, 1208
HpyF3I CTNAG 6 cut(s) 183, 564, 665, 778, 1239, 1347
HpySE526I ACGT 3 cut(s) 219, 318, 878
Hsp92II CATG 4 cut(s) 518, 803, 1122, 1247
Kpn2I TCCGGA 1 cut(s) 592
Ksp22I TGATCA 2 cut(s) 1146, 1470
Kzo9I GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
LguI GCTCTTC 2 cut(s) 156, 360
LmnI GCTCC 7 cut(s) 130, 259, 460, 639, 862, 1120, 1430
Lsp1109I GCAGC 2 cut(s) 382, 1503
LweI GCATC 4 cut(s) 581, 682, 736, 1528
MaeI CTAG 3 cut(s) 173, 672, 1194
MaeII ACGT 3 cut(s) 219, 318, 878
MaeIII GTNAC 5 cut(s) 52, 139, 818, 830, 1327
MalI GATC 8 cut(s) 330, 719, 743, 765, 999, 1148, 1314, 1472
MboI GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
MfeI CAATTG 1 cut(s) 1563
MflI RGATCY 2 cut(s) 328, 763
MhlI GDGCHC 3 cut(s) 264, 522, 1385
MlsI TGGCCA 1 cut(s) 1043
MluCI AATT 5 cut(s) 1006, 1075, 1368, 1436, 1563
MluNI TGGCCA 1 cut(s) 1043
MlyI GAGTC 4 cut(s) 74, 107, 155, 1442
MmeI TCCRAC 1 cut(s) 48
Mox20I TGGCCA 1 cut(s) 1043
Mph1103I ATGCAT 1 cut(s) 801
MroI TCCGGA 1 cut(s) 592
MroXI GAANNNNTTC 1 cut(s) 1440
MscI TGGCCA 1 cut(s) 1043
MseI TTAA 4 cut(s) 366, 993, 1002, 1627
MslI CAYNNNNRTG 3 cut(s) 804, 1388, 1490
Msp20I TGGCCA 1 cut(s) 1043
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 7 cut(s) 35, 50, 539, 593, 637, 913, 1402
MspR9I CCNGG 5 cut(s) 539, 966, 1014, 1341, 1403
MunI CAATTG 1 cut(s) 1563
Mva1269I GAATGC 1 cut(s) 1133
MvaI CCWGG 3 cut(s) 966, 1014, 1341
MvnI CGCG 1 cut(s) 584
MwoI GCNNNNNNNGC 5 cut(s) 184, 376, 569, 1199, 1208
NciI CCSGG 2 cut(s) 539, 1403
NcoI CCATGG 1 cut(s) 1118
NdeII GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
NheI GCTAGC 1 cut(s) 1193
NlaIII CATG 4 cut(s) 518, 803, 1122, 1247
NlaIV GGNNCC 2 cut(s) 261, 282
NmuCI GTSAC 3 cut(s) 52, 139, 818
NsiI ATGCAT 1 cut(s) 801
NspI RCATGY 1 cut(s) 1247
OliI CACNNNNGTG 1 cut(s) 1388
PaeR7I CTCGAG 1 cut(s) 95
PceI AGGCCT 1 cut(s) 964
PciSI GCTCTTC 2 cut(s) 156, 360
PctI GAATGC 1 cut(s) 1133
PdmI GAANNNNTTC 1 cut(s) 1440
PfeI GAWTC 5 cut(s) 71, 268, 338, 494, 649
PflFI GACNNNGTC 1 cut(s) 145
PflMI CCANNNNNTGG 1 cut(s) 1392
PkrI GCNGC 2 cut(s) 372, 1518
PleI GAGTC 4 cut(s) 73, 106, 154, 1442
PpsI GAGTC 4 cut(s) 73, 106, 154, 1442
PsiI TTATAA 1 cut(s) 1367
Psp6I CCWGG 3 cut(s) 964, 1012, 1339
PspEI GGTNACC 1 cut(s) 818
PspFI CCCAGC 1 cut(s) 1198
PspGI CCWGG 3 cut(s) 964, 1012, 1339
PspN4I GGNNCC 2 cut(s) 261, 282
PspPI GGNCC 2 cut(s) 1016, 1170
PspXI VCTCGAGB 1 cut(s) 95
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 2 cut(s) 328, 763
PsyI GACNNNGTC 1 cut(s) 145
RsaI GTAC 3 cut(s) 44, 1229, 1601
RsaNI GTAC 3 cut(s) 43, 1228, 1600
RseI CAYNNNNRTG 3 cut(s) 804, 1388, 1490
SapI GCTCTTC 2 cut(s) 156, 360
SaqAI TTAA 4 cut(s) 366, 993, 1002, 1627
SatI GCNGC 2 cut(s) 371, 1517
Sau3AI GATC 8 cut(s) 328, 717, 741, 763, 997, 1146, 1312, 1470
Sau96I GGNCC 2 cut(s) 1016, 1170
SchI GAGTC 4 cut(s) 74, 107, 155, 1442
ScrFI CCNGG 5 cut(s) 539, 966, 1014, 1341, 1403
SduI GDGCHC 3 cut(s) 264, 522, 1385
SfaNI GCATC 4 cut(s) 581, 682, 736, 1528
SfcI CTRYAG 1 cut(s) 81
Sfr274I CTCGAG 1 cut(s) 95
SinI GGWCC 1 cut(s) 1170
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 3 cut(s) 804, 1388, 1490
SmlI CTYRAG 5 cut(s) 95, 626, 656, 1001, 1452
SmoI CTYRAG 5 cut(s) 95, 626, 656, 1001, 1452
Sse9I AATT 5 cut(s) 1006, 1075, 1368, 1436, 1563
SseBI AGGCCT 1 cut(s) 964
SsiI CCGC 7 cut(s) 29, 47, 170, 284, 582, 919, 1525
SspI AATATT 1 cut(s) 1554
SspMI CTAG 3 cut(s) 173, 672, 1194
StuI AGGCCT 1 cut(s) 964
StyD4I CCNGG 5 cut(s) 537, 964, 1012, 1339, 1401
StyI CCWWGG 3 cut(s) 246, 435, 1118
TaaI ACNGT 3 cut(s) 58, 1283, 1357
TaiI ACGT 3 cut(s) 222, 321, 881
TaqI TCGA 5 cut(s) 96, 528, 605, 744, 1614
TasI AATT 5 cut(s) 1006, 1075, 1368, 1436, 1563
TatI WGTACW 2 cut(s) 1227, 1599
TfiI GAWTC 5 cut(s) 71, 268, 338, 494, 649
Tru1I TTAA 4 cut(s) 366, 993, 1002, 1627
Tru9I TTAA 4 cut(s) 366, 993, 1002, 1627
TscAI CASTG 3 cut(s) 728, 1473, 1518
TseFI GTSAC 3 cut(s) 52, 139, 818
TseI GCWGC 2 cut(s) 370, 1516
Tsp45I GTSAC 3 cut(s) 52, 139, 818
TspDTI ATGAA 2 cut(s) 1508, 1521
TspGWI ACGGA 1 cut(s) 158
TspRI CASTG 3 cut(s) 728, 1473, 1518
Tth111I GACNNNGTC 1 cut(s) 145
Van91I CCANNNNNTGG 1 cut(s) 1392
Vha464I CTTAAG 1 cut(s) 1001
VneI GTGCAC 1 cut(s) 1381
VpaK11BI GGWCC 1 cut(s) 1170
XapI RAATTY 2 cut(s) 1006, 1436
XceI RCATGY 1 cut(s) 1247
XhoI CTCGAG 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 1440
XspI CTAG 3 cut(s) 173, 672, 1194
Zsp2I ATGCAT 1 cut(s) 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.