RchiOBHm_Chr7g0227591

Patellin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0012299
Physical Location & Seq
Forward (+)
50830919 .. 50834632
3714 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20385

Sequence Viewer

Length: 1623 bp
ATGGCTGATGAAACCACCATAACCACCCCGCCACGGGTAGACCAACCACCTTTCGCGGTGGTTGAGTCCGAATCGCCTTCTGTGGCCGAAAAACTCGAGTCTAAAGAAGACCCACTTCCACCGGCGCCATTACCAGAAGTGACAGAGTCTGCCAAGGAAGAAGAGCCACCGCTAGAGCTGCCTCACGAGTCTCCTCCCGAGGTGAAGGCTAAGTCCGAGGAGGAGGTTTTAGTTGTTGGGTCTGTGCAGGCCAAGGAGGGTGAGGAACCAAAGATTCGGAAACCGATTCCGCAGTCTCTGGTTTCGTTCAAAGAGGAAAGCAATATAGTGGCGGATCTCTCAGATTCCGAGAGGAAAGCACTTCAAGAACTGAAGCAGCTCGTCCAGGAGGCTCTCAACACTCGCCAGTTCACTTCCCCAAAACAAGAAGTGAAAGAGACCAAGGACAAACCAGCTCCCAAAACTGAAGAAGACACTGCTGGTTCGGAATCCGAAACAAAGCCGCTCCATGAGCCCAAAATCGAGGAGAACCCAGTGAAGGAAGCAGAGGAAGTAGCTAAGGAAACATCGCAGCTGGCGATTTCTCCTGAGGAGGTTTCAATTTGGGGGGTTCCGCTGCTCAAGGACGACAGGAGCGATGTGATTCTTCTCAAGTTCCTTAGGGCTCGGGACTTCAAGGTGAGAGATGCTTTTGTTATGCTCCGAAACACGATCCAGTGGAGGAAGAAGTTTGGGATCGATGCTCTTGTGGACGAAGATCTCGGTGATGATTTGGAGAAAGTGGTTTTTATGCATGGGTATGACAGAGAGGGTCACCCTGTGTGTTACAATGTGTTTGGGGAGTTTCAGAACAAGGAGCTGTATCAGAAGACGTTTTTGGATGAGGAAAAGAGAACCAAGTTTCTCCGGTGGCGGATTCAGTTCTTGGAGAGAAGCATTAGGAAGCTGGATTTCAGCCCTGGTGGTGTTTGCACTATTTTTCAGGTTAATGATCTTAAGAATTCTCCTGGCCCTGCAAAGAGTGAGCTTCGCTTGGCCACCAAACAAGCCCTTCAGTTGCTTCAGGACAATTATCCCGAGTTTGTAGTCAAACAGGTGTTTGTCAATGCTCCTTGGTGGTATCTTGCGTTCTACACATTGATCAGTCCCTTCATGACACAGAGGACCAAAAGCAAGTTTGTCTTTGCAAGCCCAGCCAAATCTGCAGAGACCCTTTTCAAGTACATTTCTGCTGAGTATGTTCCTATACAATATGGGGGTTTGAGTGTGGATTACTGTGAGTGCAACCCAGAATTCACGATTGCTGATCCAGTCACTGATGTAACCATCAAACCTGGAACAAAGAAGACTGTGGAAATTATAATTTATGAGAAGTGTACCATCGTGTGGGAACTTCGTGTAGTTGGGTGGGAGGTGAGCTACAGTGCTGAGTTTGTTCCCGACTCTCAAGATGCATATACACTGATCATTCAAAAAGCCACAAAGATGGCCCCAACTGATGAACCAGTGCTGCCTCACAGGTTCAAAGTTGGCGAGCTGGGTAAAATATTGCTCACCGTTGACAATCCAACCTCAAAGAAGAAGAGGCTTCTGTACAGGTTCAAGGTCGAACCCTCCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

540

Amino Acids

61.51

Weight (kDa)

5.11

Isoelectric Point (pI)

54.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 185 - 236 1.1e-09 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 260 - 420 6.2e-31 CRAL/TRIO domain
GOLD_PATL1_C PF25099 444 - 528 1.3e-35 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012299)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72160
fragaria_vesca FvH4_5g31710 FvH4_5g31710
malus_domestica MD08G1218000.v1.1 MD15G1405900.v1.1
prunus_persica Prupe.1G555300_v2.0.a1
pyrus_communis pycom08g18900 pycom15g36270
rosa_chinensis RchiOBHm_Chr7g0227591
rosa_laevigata RLG00000001634
rosa_multiflora Rmu_sc0001772.1_g000008
rosa_roxburghii Rroxscaffold_3G00232020
rosa_rugosa Rorug07G0242000 Rorug07G0242100
rosa_samantha Rh7AG395500 Rh7BG377300 Rh7CG414200 Rh7DG391300
rosa_wichuraiana Rw7G032890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1361
AccB1I GGYRCC 1 cut(s) 124
AccB7I CCANNNNNTGG 1 cut(s) 1386
AccBSI CCGCTC 1 cut(s) 505
AccI GTMKAC 1 cut(s) 39
AccII CGCG 1 cut(s) 56
AciI CCGC 8 cut(s) 29, 56, 170, 290, 332, 503, 614, 913
AclWI GGATC 4 cut(s) 342, 706, 743, 1301
AcoI YGGCCR 2 cut(s) 84, 1035
AcsI RAATTY 2 cut(s) 1000, 1292
AcuI CTGAAG 4 cut(s) 392, 486, 1037, 1046
AcyI GRCGYC 1 cut(s) 125
AdeI CACNNNGTG 1 cut(s) 820
AfaI GTAC 3 cut(s) 1223, 1378, 1595
AfiI CCNNNNNNNGG 4 cut(s) 33, 34, 538, 1386
AflII CTTAAG 1 cut(s) 995
AgsI TTSAA 8 cut(s) 310, 365, 600, 676, 1219, 1472, 1525, 1603
AjnI CCWGG 4 cut(s) 384, 958, 1006, 1333
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
Alw26I GTCTC 4 cut(s) 195, 300, 431, 1202
AlwI GGATC 4 cut(s) 342, 706, 743, 1301
AlwNI CAGNNNCTG 3 cut(s) 149, 298, 1316
Ama87I CYCGRG 4 cut(s) 95, 197, 666, 1076
AoxI GGCC 5 cut(s) 84, 249, 1009, 1035, 1488
ApeKI GCWGC 5 cut(s) 178, 376, 571, 616, 1510
ApoI RAATTY 2 cut(s) 1000, 1292
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 3 cut(s) 1010, 1164, 1489
AsuHPI GGTGA 7 cut(s) 214, 272, 691, 776, 806, 1426, 1546
AvaI CYCGRG 4 cut(s) 95, 197, 666, 1076
AvaII GGWCC 1 cut(s) 1164
AxyI CCTNAGG 2 cut(s) 588, 659
BalI TGGCCA 1 cut(s) 1037
BanI GGYRCC 1 cut(s) 124
BanII GRGCYC 2 cut(s) 516, 667
BauI CACGAG 1 cut(s) 185
BbsI GAAGAC 4 cut(s) 114, 477, 875, 1352
BbvI GCAGC 5 cut(s) 165, 388, 583, 603, 1497
BccI CCATC 3 cut(s) 1334, 1388, 1480
BciT130I CCWGG 4 cut(s) 386, 960, 1008, 1335
BclI TGATCA 2 cut(s) 1140, 1464
BcoDI GTCTC 4 cut(s) 195, 300, 431, 1202
BfaI CTAG 1 cut(s) 173
BfmI CTRYAG 2 cut(s) 1203, 1420
BfoI RGCGCY 1 cut(s) 128
BfrI CTTAAG 1 cut(s) 995
BglII AGATCT 1 cut(s) 757
BisI GCNGC 6 cut(s) 179, 377, 503, 572, 617, 1511
BlsI GCNGC 6 cut(s) 180, 378, 504, 573, 618, 1512
Bme1390I CCNGG 4 cut(s) 386, 960, 1008, 1335
Bme18I GGWCC 1 cut(s) 1164
BmeT110I CYCGRG 4 cut(s) 95, 197, 666, 1076
BmgT120I GGNCC 3 cut(s) 1010, 1164, 1489
BmiI GGNNCC 4 cut(s) 126, 267, 612, 1491
BmrFI CCNGG 4 cut(s) 386, 960, 1008, 1335
BmrI ACTGGG 1 cut(s) 527
BmsI GCATC 3 cut(s) 676, 730, 1441
BmuI ACTGGG 1 cut(s) 527
BpiI GAAGAC 4 cut(s) 114, 477, 875, 1352
Bpu10I CCTNAGC 1 cut(s) 558
BpuEI CTTGAG 3 cut(s) 605, 635, 1431
Bsa29I ATCGAT 1 cut(s) 738
BsaHI GRCGYC 1 cut(s) 125
BsaI GGTCTC 2 cut(s) 431, 1202
BsaJI CCNNGG 8 cut(s) 32, 153, 198, 216, 252, 441, 958, 1112
BsaWI WCCGGW 1 cut(s) 906
Bsc4I CCNNNNNNNGG 4 cut(s) 33, 34, 538, 1386
Bse118I RCCGGY 1 cut(s) 121
Bse1I ACTGG 5 cut(s) 406, 533, 715, 1310, 1505
Bse21I CCTNAGG 2 cut(s) 588, 659
BseBI CCWGG 4 cut(s) 386, 960, 1008, 1335
BseCI ATCGAT 1 cut(s) 738
BseDI CCNNGG 8 cut(s) 32, 153, 198, 216, 252, 441, 958, 1112
BseGI GGATG 1 cut(s) 886
BseLI CCNNNNNNNGG 4 cut(s) 33, 34, 538, 1386
BseMII CTCAG 4 cut(s) 354, 579, 1224, 1419
BseNI ACTGG 5 cut(s) 406, 533, 715, 1310, 1505
BseRI GAGGAG 5 cut(s) 183, 233, 236, 539, 605
BseXI GCAGC 5 cut(s) 165, 388, 583, 603, 1497
BseYI CCCAGC 2 cut(s) 1192, 1537
BsgI GTGCAG 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 5 cut(s) 86, 251, 1011, 1037, 1490
BshNI GGYRCC 1 cut(s) 124
BshVI ATCGAT 1 cut(s) 738
BsiHKCI CYCGRG 4 cut(s) 95, 197, 666, 1076
BsiSI CCGG 2 cut(s) 122, 907
BslFI GGGAC 2 cut(s) 683, 1131
BslI CCNNNNNNNGG 4 cut(s) 33, 34, 538, 1386
BsmAI GTCTC 4 cut(s) 195, 300, 431, 1202
BsmFI GGGAC 2 cut(s) 683, 1131
BsnI GGCC 5 cut(s) 86, 251, 1011, 1037, 1490
Bso31I GGTCTC 2 cut(s) 431, 1202
BsoBI CYCGRG 4 cut(s) 95, 197, 666, 1076
Bsp1286I GDGCHC 2 cut(s) 516, 667
Bsp1407I TGTACA 1 cut(s) 1593
Bsp143I GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
BspACI CCGC 8 cut(s) 29, 56, 170, 290, 332, 503, 614, 913
BspANI GGCC 5 cut(s) 86, 251, 1011, 1037, 1490
BspCNI CTCAG 4 cut(s) 353, 580, 1225, 1420
BspDI ATCGAT 1 cut(s) 738
BspFNI CGCG 1 cut(s) 56
BspHI TCATGA 1 cut(s) 1152
BspLI GGNNCC 4 cut(s) 126, 267, 612, 1491
BspMAI CTGCAG 1 cut(s) 1207
BspPI GGATC 4 cut(s) 342, 706, 743, 1301
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 124
BspTI CTTAAG 1 cut(s) 995
BspTNI GGTCTC 2 cut(s) 431, 1202
BsrBI CCGCTC 1 cut(s) 505
BsrFI RCCGGY 1 cut(s) 121
BsrGI TGTACA 1 cut(s) 1593
BsrI ACTGG 5 cut(s) 406, 533, 715, 1310, 1505
BssAI RCCGGY 1 cut(s) 121
BssECI CCNNGG 8 cut(s) 32, 153, 198, 216, 252, 441, 958, 1112
BssMI GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
BssNI GRCGYC 1 cut(s) 125
BssSI CACGAG 1 cut(s) 185
BssT1I CCWWGG 4 cut(s) 153, 252, 441, 1112
Bst2BI CACGAG 1 cut(s) 185
Bst2UI CCWGG 4 cut(s) 386, 960, 1008, 1335
Bst4CI ACNGT 4 cut(s) 1277, 1351, 1424, 1558
Bst6I CTCTTC 2 cut(s) 156, 1577
BstACI GRCGYC 1 cut(s) 125
BstAFI CTTAAG 1 cut(s) 995
BstAUI TGTACA 1 cut(s) 1593
BstC8I GCNNGC 4 cut(s) 249, 576, 1189, 1535
BstDEI CTNAG 7 cut(s) 210, 340, 558, 588, 659, 1233, 1428
BstDSI CCRYGG 1 cut(s) 32
BstEII GGTNACC 1 cut(s) 812
BstF5I GGATG 1 cut(s) 886
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 1 cut(s) 127
BstKTI GATC 8 cut(s) 337, 714, 738, 760, 994, 1143, 1309, 1467
BstMAI GTCTC 4 cut(s) 195, 300, 431, 1202
BstMBI GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
BstMWI GCNNNNNNNGC 4 cut(s) 178, 511, 1193, 1202
BstNI CCWGG 4 cut(s) 386, 960, 1008, 1335
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 4 cut(s) 384, 958, 1006, 1333
BstSFI CTRYAG 2 cut(s) 1203, 1420
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 5 cut(s) 165, 388, 583, 603, 1497
BstV2I GAAGAC 4 cut(s) 114, 477, 875, 1352
BstX2I RGATCY 2 cut(s) 334, 757
BstXI CCANNNNNNTGG 1 cut(s) 1486
BstYI RGATCY 2 cut(s) 334, 757
Bsu15I ATCGAT 1 cut(s) 738
Bsu36I CCTNAGG 2 cut(s) 588, 659
BsuRI GGCC 5 cut(s) 86, 251, 1011, 1037, 1490
BsuTUI ATCGAT 1 cut(s) 738
BtgI CCRYGG 1 cut(s) 32
BtgZI GCGATG 2 cut(s) 552, 651
BtsCI GGATG 1 cut(s) 886
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 7 cut(s) 474, 540, 722, 1314, 1429, 1460, 1512
Cac8I GCNNGC 4 cut(s) 249, 576, 1189, 1535
CaiI CAGNNNCTG 3 cut(s) 149, 298, 1316
CciI TCATGA 1 cut(s) 1152
CfoI GCGC 1 cut(s) 127
Cfr10I RCCGGY 1 cut(s) 121
Cfr13I GGNCC 3 cut(s) 1010, 1164, 1489
ClaI ATCGAT 1 cut(s) 738
Csp6I GTAC 3 cut(s) 1222, 1377, 1594
CviAII CATG 3 cut(s) 509, 794, 1153
CviQI GTAC 3 cut(s) 1222, 1377, 1594
DdeI CTNAG 7 cut(s) 210, 340, 558, 588, 659, 1233, 1428
DinI GGCGCC 1 cut(s) 126
DpnI GATC 8 cut(s) 336, 713, 737, 759, 993, 1142, 1308, 1466
DpnII GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
DraIII CACNNNGTG 1 cut(s) 820
EaeI YGGCCR 2 cut(s) 84, 1035
Eam1104I CTCTTC 2 cut(s) 156, 1577
EarI CTCTTC 2 cut(s) 156, 1577
EciI GGCGGA 2 cut(s) 347, 928
Eco130I CCWWGG 4 cut(s) 153, 252, 441, 1112
Eco24I GRGCYC 2 cut(s) 516, 667
Eco31I GGTCTC 2 cut(s) 431, 1202
Eco47I GGWCC 1 cut(s) 1164
Eco57I CTGAAG 4 cut(s) 392, 486, 1037, 1046
Eco81I CCTNAGG 2 cut(s) 588, 659
Eco88I CYCGRG 4 cut(s) 95, 197, 666, 1076
Eco91I GGTNACC 1 cut(s) 812
EcoO65I GGTNACC 1 cut(s) 812
EcoRI GAATTC 2 cut(s) 1000, 1292
EcoRII CCWGG 4 cut(s) 384, 958, 1006, 1333
EcoT14I CCWWGG 4 cut(s) 153, 252, 441, 1112
EcoT22I ATGCAT 2 cut(s) 795, 1456
EcoT38I GRGCYC 2 cut(s) 516, 667
EgeI GGCGCC 1 cut(s) 126
EheI GGCGCC 1 cut(s) 126
ErhI CCWWGG 4 cut(s) 153, 252, 441, 1112
FaeI CATG 3 cut(s) 512, 797, 1156
FalI AAGNNNNNCTT 4 cut(s) 99, 131, 1166, 1198
FaqI GGGAC 2 cut(s) 683, 1131
FatI CATG 3 cut(s) 508, 793, 1152
FauI CCCGC 1 cut(s) 36
FbaI TGATCA 2 cut(s) 1140, 1464
FblI GTMKAC 1 cut(s) 39
Fnu4HI GCNGC 6 cut(s) 179, 377, 503, 572, 617, 1511
FokI GGATG 1 cut(s) 893
FriOI GRGCYC 2 cut(s) 516, 667
Fsp4HI GCNGC 6 cut(s) 179, 377, 503, 572, 617, 1511
FspBI CTAG 1 cut(s) 173
GlaI GCGC 1 cut(s) 126
GluI GCNGC 6 cut(s) 179, 377, 503, 572, 617, 1511
GsaI CCCAGC 2 cut(s) 1196, 1541
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 5 cut(s) 86, 251, 1011, 1037, 1490
HapII CCGG 2 cut(s) 122, 907
HhaI GCGC 1 cut(s) 127
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 3 cut(s) 512, 797, 1156
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 1 cut(s) 1561
HindII GTYRAC 1 cut(s) 1561
HpaII CCGG 2 cut(s) 122, 907
HphI GGTGA 7 cut(s) 214, 272, 691, 776, 806, 1426, 1546
Hpy166II GTNNAC 5 cut(s) 40, 411, 751, 1377, 1561
Hpy8I GTNNAC 5 cut(s) 40, 411, 751, 1377, 1561
HpyAV CCTTC 5 cut(s) 87, 199, 532, 1061, 1159
HpyCH4III ACNGT 4 cut(s) 1277, 1351, 1424, 1558
HpyCH4IV ACGT 1 cut(s) 872
HpyCH4V TGCA 8 cut(s) 247, 793, 972, 1016, 1187, 1205, 1284, 1454
HpyF10VI GCNNNNNNNGC 4 cut(s) 178, 511, 1193, 1202
HpyF3I CTNAG 7 cut(s) 210, 340, 558, 588, 659, 1233, 1428
HpySE526I ACGT 1 cut(s) 872
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 3 cut(s) 512, 797, 1156
HspAI GCGC 1 cut(s) 125
KasI GGCGCC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 1140, 1464
Kzo9I GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 6 cut(s) 460, 510, 633, 705, 856, 1114
Lsp1109I GCAGC 5 cut(s) 165, 388, 583, 603, 1497
LweI GCATC 3 cut(s) 676, 730, 1441
MaeI CTAG 1 cut(s) 173
MaeII ACGT 1 cut(s) 872
MaeIII GTNAC 5 cut(s) 139, 812, 824, 1312, 1321
MalI GATC 8 cut(s) 336, 713, 737, 759, 993, 1142, 1308, 1466
MbiI CCGCTC 1 cut(s) 505
MboI GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
MflI RGATCY 2 cut(s) 334, 757
MhlI GDGCHC 2 cut(s) 516, 667
MlsI TGGCCA 1 cut(s) 1037
MluCI AATT 6 cut(s) 600, 1000, 1069, 1292, 1356, 1362
MluNI TGGCCA 1 cut(s) 1037
Mly113I GGCGCC 1 cut(s) 125
MlyI GAGTC 5 cut(s) 74, 107, 155, 197, 1436
MmeI TCCRAC 1 cut(s) 1592
Mox20I TGGCCA 1 cut(s) 1037
Mph1103I ATGCAT 2 cut(s) 795, 1456
MscI TGGCCA 1 cut(s) 1037
MseI TTAA 2 cut(s) 987, 996
MslI CAYNNNNRTG 2 cut(s) 798, 1484
Msp20I TGGCCA 1 cut(s) 1037
MspA1I CMGCKG 2 cut(s) 574, 616
MspCI CTTAAG 1 cut(s) 995
MspI CCGG 2 cut(s) 122, 907
MspR9I CCNGG 4 cut(s) 386, 960, 1008, 1335
MvaI CCWGG 4 cut(s) 386, 960, 1008, 1335
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 4 cut(s) 178, 511, 1193, 1202
NarI GGCGCC 1 cut(s) 125
NdeII GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
NlaIII CATG 3 cut(s) 512, 797, 1156
NlaIV GGNNCC 4 cut(s) 126, 267, 612, 1491
NmuCI GTSAC 3 cut(s) 139, 812, 1312
NsiI ATGCAT 2 cut(s) 795, 1456
PaeR7I CTCGAG 1 cut(s) 95
PagI TCATGA 1 cut(s) 1152
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 2 cut(s) 575, 633
PfeI GAWTC 7 cut(s) 71, 274, 286, 344, 488, 643, 916
PflFI GACNNNGTC 1 cut(s) 145
PflMI CCANNNNNTGG 1 cut(s) 1386
PfoI TCCNGGA 1 cut(s) 384
PkrI GCNGC 6 cut(s) 180, 378, 504, 573, 618, 1512
PleI GAGTC 5 cut(s) 73, 106, 154, 196, 1436
PluTI GGCGCC 1 cut(s) 128
PpsI GAGTC 5 cut(s) 73, 106, 154, 196, 1436
PsiI TTATAA 1 cut(s) 1361
Psp6I CCWGG 4 cut(s) 384, 958, 1006, 1333
PspEI GGTNACC 1 cut(s) 812
PspFI CCCAGC 2 cut(s) 1192, 1537
PspGI CCWGG 4 cut(s) 384, 958, 1006, 1333
PspN4I GGNNCC 4 cut(s) 126, 267, 612, 1491
PspPI GGNCC 3 cut(s) 1010, 1164, 1489
PspXI VCTCGAGB 1 cut(s) 95
PsrI GAACNNNNNNTAC 2 cut(s) 1112, 1144
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 3 cut(s) 149, 298, 1316
PsuI RGATCY 2 cut(s) 334, 757
PsyI GACNNNGTC 1 cut(s) 145
PvuII CAGCTG 1 cut(s) 574
RsaI GTAC 3 cut(s) 1223, 1378, 1595
RsaNI GTAC 3 cut(s) 1222, 1377, 1594
RseI CAYNNNNRTG 2 cut(s) 798, 1484
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 2 cut(s) 987, 996
SatI GCNGC 6 cut(s) 179, 377, 503, 572, 617, 1511
Sau3AI GATC 8 cut(s) 334, 711, 735, 757, 991, 1140, 1306, 1464
Sau96I GGNCC 3 cut(s) 1010, 1164, 1489
SchI GAGTC 5 cut(s) 74, 107, 155, 197, 1436
ScrFI CCNGG 4 cut(s) 386, 960, 1008, 1335
SduI GDGCHC 2 cut(s) 516, 667
SfaNI GCATC 3 cut(s) 676, 730, 1441
SfcI CTRYAG 2 cut(s) 1203, 1420
SfoI GGCGCC 1 cut(s) 126
Sfr274I CTCGAG 1 cut(s) 95
SgrAI CRCCGGYG 1 cut(s) 121
SinI GGWCC 1 cut(s) 1164
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 2 cut(s) 798, 1484
SmlI CTYRAG 5 cut(s) 95, 620, 650, 995, 1446
SmoI CTYRAG 5 cut(s) 95, 620, 650, 995, 1446
Sse9I AATT 6 cut(s) 600, 1000, 1069, 1292, 1356, 1362
SsiI CCGC 8 cut(s) 29, 56, 170, 290, 332, 503, 614, 913
SspDI GGCGCC 1 cut(s) 124
SspI AATATT 1 cut(s) 1548
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 4 cut(s) 384, 958, 1006, 1333
StyI CCWWGG 4 cut(s) 153, 252, 441, 1112
TaaI ACNGT 4 cut(s) 1277, 1351, 1424, 1558
TaiI ACGT 1 cut(s) 875
TaqI TCGA 4 cut(s) 96, 522, 738, 1608
TasI AATT 6 cut(s) 600, 1000, 1069, 1292, 1356, 1362
TatI WGTACW 2 cut(s) 1221, 1593
TauI GCSGC 1 cut(s) 505
TfiI GAWTC 7 cut(s) 71, 274, 286, 344, 488, 643, 916
Tru1I TTAA 2 cut(s) 987, 996
Tru9I TTAA 2 cut(s) 987, 996
TscAI CASTG 7 cut(s) 481, 540, 722, 1321, 1429, 1467, 1512
TseFI GTSAC 3 cut(s) 139, 812, 1312
TseI GCWGC 5 cut(s) 178, 376, 571, 616, 1510
Tsp45I GTSAC 3 cut(s) 139, 812, 1312
TspDTI ATGAA 3 cut(s) 24, 1141, 1515
TspRI CASTG 7 cut(s) 481, 540, 722, 1321, 1429, 1467, 1512
Tth111I GACNNNGTC 1 cut(s) 145
Van91I CCANNNNNTGG 1 cut(s) 1386
Vha464I CTTAAG 1 cut(s) 995
VpaK11BI GGWCC 1 cut(s) 1164
XapI RAATTY 2 cut(s) 1000, 1292
XhoI CTCGAG 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 39
XspI CTAG 1 cut(s) 173
Zsp2I ATGCAT 2 cut(s) 795, 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.