MD08G1218000.v1.1

Patellin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0012299
Physical Location & Seq
Forward (+)
28059299 .. 28061553
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1218000.v1.1.491

Sequence Viewer

Length: 1548 bp
ATGGCCGACGAAATCCCCATACCACCACCACCATCAGACCAAGCGCCGCCGCCAGGGCCTCCTGCCGCTTCCGAGGCTGAATCACAGGCTTTGACGGTAGCAGAGTCTAAAGAAGACGCGCCCCCACCACCACCGCTGCCAGAAGTGGCAGAGTCTGGGAAAGAAGAGGCACTTGCACTACCACCAGTGGCGGCGGCAGCGGTGGAAGAGGCGGATAAAAAGCAGATTCCTCCATCTTTGATTTCGTTCAAGGAGGAGAGTAACGTAGTGGCCGATCTCTCAGATTCAGAGAGGAAAGCTCTTCAAGAACTGAAGCAGCTCGTCCAGGAAGCTCTCAACACTCACCAGTTCACGTCCCCAAAAACTAAACCGCAACCAGCACAGGTTTCCGAATCGGAATCAGAACCAAAACCAACTCATGAACCCAAAATGGAAGAGCAGCCACTGATCGAAGCAGAGGAATTAGCTAAAGAAACAACAGTACCGGGGGTGGAGGCGGCGGAGGAAGTTTCCATTTGGGGAGTCCCTCTTCTCAAGGACGAGAGGAGCGATGTCATTCTTCTCAAGTTCCTGAGGGCGAGGGACTTGAAGGTGAAGGATGCCTTTGTCATGCTCCGCAACACCATTCAATGGCGGAAAGAGTTCGGGATCGGCGCTCTTGTGGAGGAGGATCTCGGTGATGATTTGGAGAAGGTGGTGTTTGTTCATGGGTACGATAGGGACGGTCACCCTGTGTGTTACAATGTGTTCGGGGAGTTTCAGAACAAAGAATTGTACCAAAAAACATTCTCGGATGAGGAAAAGCGAACCAAGTTTCTCCGGTGGCGGGTTCAGTTCTTGGAGAAGGGTATTCGAAAGCTTGATCTCACTCCTGCTGGTATTTCTAGTATTTTTCAGGTCAATGATCTCAAGAATTCACCTGGACCCGCAAAGAAGGAACTTCGATTGGCCACCAAACAGGCCCTTCACTTGCTCCAGGACAATTATCCCGAATTCGTAGCCAAACAGGTGTTTATCAATGCTCCTTGGTGGTATCTTGCATTCTACACCATGATCAGTCCGTTCTTGACGCCGAGGACGAAAAGCAAGTTTGTTGTTGCAAGCCCAGCCAAAACCGCAGAAACCCTTTTCAAGTACATCTCTCCTGAGCATGTTCCGATTCAGTATGGTGGCTTGAGTGTCGATTACTGTGACTGCAACCCCGAGTTTACCATTGCGGATCCAGTTGCTGATGTTACAATTAAACCTGCAACAAAACAAACTGTGGAAATCATAATATATGAGAAGTGCACCATTGTGTGGGAGCTCCGTGTGGTCGGATGGGAGGTGAGCTATGGGGCTGAGTTTGTGCCCGAGGCCGAAAATGGATACACAATCATCATACAGAAAGCCACAAAGATGAGCCCAACCGATGAACCGGTGGTGAGTAACAGCTTCAAAGTTGGCGAACTGGGTAAAATACTACTCAAGATTGACAACCCAACCTCGAAAAAGAAAAGGCTTCTGTACAGGTTCAAGATCGAACCCCTCGATTACTCAGGAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

516

Amino Acids

57.61

Weight (kDa)

5.03

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 137 - 207 4e-09 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 231 - 391 1.8e-30 CRAL/TRIO domain
GOLD_PATL1_C PF25099 415 - 499 4.4e-38 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012299)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72160
fragaria_vesca FvH4_5g31710 FvH4_5g31710
malus_domestica MD08G1218000.v1.1 MD15G1405900.v1.1
prunus_persica Prupe.1G555300_v2.0.a1
pyrus_communis pycom08g18900 pycom15g36270
rosa_chinensis RchiOBHm_Chr7g0227591
rosa_laevigata RLG00000001634
rosa_multiflora Rmu_sc0001772.1_g000008
rosa_roxburghii Rroxscaffold_3G00232020
rosa_rugosa Rorug07G0242000 Rorug07G0242100
rosa_samantha Rh7AG395500 Rh7BG377300 Rh7CG414200 Rh7DG391300
rosa_wichuraiana Rw7G032890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1255
AccB7I CCANNNNNTGG 2 cut(s) 630, 1299
AccII CGCG 1 cut(s) 119
AclWI GGATC 4 cut(s) 656, 678, 1214, 1227
AcoI YGGCCR 3 cut(s) 3, 270, 948
AcsI RAATTY 3 cut(s) 913, 992, 1542
AcuI CTGAAG 1 cut(s) 332
AcyI GRCGYC 1 cut(s) 1070
AdeI CACNNNGTG 1 cut(s) 733
AfaI GTAC 5 cut(s) 483, 713, 776, 1136, 1508
AfiI CCNNNNNNNGG 4 cut(s) 53, 630, 826, 1299
AgeI ACCGGT 1 cut(s) 1417
AgsI TTSAA 7 cut(s) 250, 305, 589, 629, 1132, 1438, 1516
AjiI CACGTC 1 cut(s) 354
AjnI CCWGG 4 cut(s) 52, 324, 919, 975
AleI CACNNNNGTG 1 cut(s) 1295
AluBI AGCT 8 cut(s) 299, 319, 332, 467, 859, 1306, 1332, 1434
AluI AGCT 8 cut(s) 299, 319, 332, 467, 859, 1306, 1332, 1434
Alw21I GWGCWC 2 cut(s) 1292, 1308
Alw44I GTGCAC 1 cut(s) 1288
AlwI GGATC 4 cut(s) 656, 678, 1214, 1227
AlwNI CAGNNNCTG 3 cut(s) 155, 445, 1229
Ama87I CYCGRG 2 cut(s) 1202, 1352
AoxI GGCC 6 cut(s) 3, 56, 270, 948, 960, 1356
ApaLI GTGCAC 1 cut(s) 1288
ApeKI GCWGC 4 cut(s) 136, 197, 316, 439
ApoI RAATTY 3 cut(s) 913, 992, 1542
AsiGI ACCGGT 1 cut(s) 1417
Asp700I GAANNNNTTC 1 cut(s) 641
AspLEI GCGC 3 cut(s) 46, 121, 656
AspS9I GGNCC 3 cut(s) 56, 923, 961
AsuC2I CCSGG 1 cut(s) 486
AsuHPI GGTGA 7 cut(s) 335, 604, 689, 719, 909, 1339, 1435
AsuII TTCGAA 1 cut(s) 853
AvaI CYCGRG 2 cut(s) 1202, 1352
AvaII GGWCC 1 cut(s) 923
AxyI CCTNAGG 1 cut(s) 572
BaeGI GKGCMC 2 cut(s) 1292, 1353
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BalI TGGCCA 1 cut(s) 950
BamHI GGATCC 1 cut(s) 1219
BanII GRGCYC 2 cut(s) 1308, 1406
BbsI GAAGAC 1 cut(s) 120
Bbv12I GWGCWC 2 cut(s) 1292, 1308
BbvI GCAGC 4 cut(s) 123, 209, 328, 451
BccI CCATC 3 cut(s) 40, 241, 1314
BciT130I CCWGG 4 cut(s) 54, 326, 921, 977
BciVI GTATCC 1 cut(s) 1361
BclI TGATCA 1 cut(s) 1053
BcnI CCSGG 1 cut(s) 486
BfaI CTAG 1 cut(s) 885
BfoI RGCGCY 2 cut(s) 47, 657
BfuAI ACCTGC 1 cut(s) 1255
BfuI GTATCC 1 cut(s) 1361
BglI GCCNNNNNGGC 1 cut(s) 55
Bme1390I CCNGG 5 cut(s) 54, 326, 486, 921, 977
Bme18I GGWCC 1 cut(s) 923
BmeT110I CYCGRG 2 cut(s) 1202, 1352
BmgBI CACGTC 1 cut(s) 354
BmgT120I GGNCC 3 cut(s) 56, 923, 961
BmiI GGNNCC 2 cut(s) 925, 1221
BmrFI CCNGG 5 cut(s) 54, 326, 486, 921, 977
BmrI ACTGGG 1 cut(s) 1460
BmsI GCATC 1 cut(s) 589
BmuI ACTGGG 1 cut(s) 1460
BpiI GAAGAC 1 cut(s) 120
BplI GAGNNNNNCTC 2 cut(s) 283, 315
BpmI CTGGAG 1 cut(s) 959
Bpu10I CCTNAGC 1 cut(s) 1146
Bpu14I TTCGAA 1 cut(s) 853
BpuEI CTTGAG 5 cut(s) 518, 548, 893, 1195, 1451
BpuMI CCSGG 1 cut(s) 486
BsaHI GRCGYC 1 cut(s) 1070
BsaJI CCNNGG 6 cut(s) 53, 72, 485, 1025, 1073, 1353
BsaWI WCCGGW 2 cut(s) 819, 1417
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 630, 826, 1299
Bse118I RCCGGY 1 cut(s) 1417
Bse1I ACTGG 4 cut(s) 185, 346, 1223, 1455
Bse21I CCTNAGG 1 cut(s) 572
Bse3DI GCAATG 1 cut(s) 1212
BseBI CCWGG 4 cut(s) 54, 326, 921, 977
BseDI CCNNGG 6 cut(s) 53, 72, 485, 1025, 1073, 1353
BseGI GGATG 3 cut(s) 604, 799, 1325
BseLI CCNNNNNNNGG 4 cut(s) 53, 630, 826, 1299
BseMI GCAATG 1 cut(s) 1212
BseMII CTCAG 4 cut(s) 294, 563, 1137, 1332
BseNI ACTGG 4 cut(s) 185, 346, 1223, 1455
BseRI GAGGAG 3 cut(s) 269, 559, 680
BseSI GKGCMC 2 cut(s) 1292, 1353
BseXI GCAGC 4 cut(s) 123, 209, 328, 451
BseYI CCCAGC 1 cut(s) 1105
Bsh1236I CGCG 1 cut(s) 119
BshFI GGCC 6 cut(s) 5, 58, 272, 950, 962, 1358
BshTI ACCGGT 1 cut(s) 1417
BsiHKAI GWGCWC 2 cut(s) 1292, 1308
BsiHKCI CYCGRG 2 cut(s) 1202, 1352
BsiSI CCGG 3 cut(s) 485, 820, 1418
BslFI GGGAC 4 cut(s) 340, 509, 596, 734
BslI CCNNNNNNNGG 4 cut(s) 53, 630, 826, 1299
BsmFI GGGAC 4 cut(s) 340, 509, 596, 734
BsmI GAATGC 1 cut(s) 1040
BsnI GGCC 6 cut(s) 5, 58, 272, 950, 962, 1358
BsoBI CYCGRG 2 cut(s) 1202, 1352
Bsp119I TTCGAA 1 cut(s) 853
Bsp1286I GDGCHC 4 cut(s) 1292, 1308, 1353, 1406
Bsp1407I TGTACA 1 cut(s) 1506
Bsp143I GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
BspANI GGCC 6 cut(s) 5, 58, 272, 950, 962, 1358
BspCNI CTCAG 4 cut(s) 293, 564, 1138, 1333
BspFNI CGCG 1 cut(s) 119
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 2 cut(s) 925, 1221
BspMI ACCTGC 1 cut(s) 1255
BspPI GGATC 4 cut(s) 656, 678, 1214, 1227
BspQI GCTCTTC 2 cut(s) 306, 429
BspT104I TTCGAA 1 cut(s) 853
BsrDI GCAATG 1 cut(s) 1212
BsrFI RCCGGY 1 cut(s) 1417
BsrGI TGTACA 1 cut(s) 1506
BsrI ACTGG 4 cut(s) 185, 346, 1223, 1455
BssAI RCCGGY 1 cut(s) 1417
BssECI CCNNGG 6 cut(s) 53, 72, 485, 1025, 1073, 1353
BssMI GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
BssNI GRCGYC 1 cut(s) 1070
BssT1I CCWWGG 1 cut(s) 1025
Bst2UI CCWGG 4 cut(s) 54, 326, 921, 977
Bst4CI ACNGT 5 cut(s) 97, 481, 725, 1190, 1264
Bst6I CTCTTC 5 cut(s) 159, 201, 306, 429, 534
BstACI GRCGYC 1 cut(s) 1070
BstAUI TGTACA 1 cut(s) 1506
BstBI TTCGAA 1 cut(s) 853
BstC8I GCNNGC 1 cut(s) 1102
BstDEI CTNAG 5 cut(s) 280, 572, 1146, 1341, 1537
BstEII GGTNACC 1 cut(s) 725
BstF5I GGATG 3 cut(s) 604, 799, 1325
BstFNI CGCG 1 cut(s) 119
BstH2I RGCGCY 2 cut(s) 47, 657
BstHHI GCGC 3 cut(s) 46, 121, 656
BstKTI GATC 9 cut(s) 277, 450, 651, 673, 865, 907, 1056, 1222, 1521
BstMBI GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
BstMWI GCNNNNNNNGC 5 cut(s) 55, 74, 197, 1106, 1115
BstNI CCWGG 4 cut(s) 54, 326, 921, 977
BstNSI RCATGY 1 cut(s) 1154
BstPI GGTNACC 1 cut(s) 725
BstSCI CCNGG 5 cut(s) 52, 324, 484, 919, 975
BstSLI GKGCMC 2 cut(s) 1292, 1353
BstUI CGCG 1 cut(s) 119
BstV1I GCAGC 4 cut(s) 123, 209, 328, 451
BstV2I GAAGAC 1 cut(s) 120
BstX2I RGATCY 2 cut(s) 670, 1219
BstYI RGATCY 2 cut(s) 670, 1219
Bsu36I CCTNAGG 1 cut(s) 572
BsuI GTATCC 1 cut(s) 1361
BsuRI GGCC 6 cut(s) 5, 58, 272, 950, 962, 1358
BtgZI GCGATG 1 cut(s) 564
BtrI CACGTC 1 cut(s) 354
BtsCI GGATG 3 cut(s) 604, 799, 1325
BtsIMutI CAGTG 2 cut(s) 192, 443
BveI ACCTGC 1 cut(s) 1255
Cac8I GCNNGC 1 cut(s) 1102
CaiI CAGNNNCTG 3 cut(s) 155, 445, 1229
CciI TCATGA 1 cut(s) 418
CfoI GCGC 3 cut(s) 46, 121, 656
Cfr10I RCCGGY 1 cut(s) 1417
Cfr13I GGNCC 3 cut(s) 56, 923, 961
CseI GACGC 2 cut(s) 125, 1078
Csp6I GTAC 5 cut(s) 482, 712, 775, 1135, 1507
CspAI ACCGGT 1 cut(s) 1417
CviAII CATG 5 cut(s) 419, 610, 707, 1051, 1151
CviQI GTAC 5 cut(s) 482, 712, 775, 1135, 1507
DdeI CTNAG 5 cut(s) 280, 572, 1146, 1341, 1537
DpnI GATC 9 cut(s) 276, 449, 650, 672, 864, 906, 1055, 1221, 1520
DpnII GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
DraIII CACNNNGTG 1 cut(s) 733
EaeI YGGCCR 3 cut(s) 3, 270, 948
Eam1104I CTCTTC 5 cut(s) 159, 201, 306, 429, 534
EarI CTCTTC 5 cut(s) 159, 201, 306, 429, 534
EciI GGCGGA 3 cut(s) 227, 515, 649
Ecl136II GAGCTC 1 cut(s) 1306
Eco130I CCWWGG 1 cut(s) 1025
Eco24I GRGCYC 2 cut(s) 1308, 1406
Eco47I GGWCC 1 cut(s) 923
Eco53kI GAGCTC 1 cut(s) 1306
Eco57I CTGAAG 1 cut(s) 332
Eco81I CCTNAGG 1 cut(s) 572
Eco88I CYCGRG 2 cut(s) 1202, 1352
Eco91I GGTNACC 1 cut(s) 725
EcoICRI GAGCTC 1 cut(s) 1306
EcoO109I RGGNCCY 2 cut(s) 56, 961
EcoO65I GGTNACC 1 cut(s) 725
EcoRI GAATTC 2 cut(s) 913, 992
EcoRII CCWGG 4 cut(s) 52, 324, 919, 975
EcoT14I CCWWGG 1 cut(s) 1025
EcoT38I GRGCYC 2 cut(s) 1308, 1406
ErhI CCWWGG 1 cut(s) 1025
FaeI CATG 5 cut(s) 422, 613, 710, 1054, 1154
FalI AAGNNNNNCTT 4 cut(s) 156, 188, 587, 619
FaqI GGGAC 4 cut(s) 340, 509, 596, 734
FatI CATG 5 cut(s) 418, 609, 706, 1050, 1150
FauI CCCGC 2 cut(s) 819, 934
FbaI TGATCA 1 cut(s) 1053
FokI GGATG 3 cut(s) 611, 806, 1332
FriOI GRGCYC 2 cut(s) 1308, 1406
FspBI CTAG 1 cut(s) 885
GlaI GCGC 3 cut(s) 45, 120, 655
GsaI CCCAGC 1 cut(s) 1109
GsuI CTGGAG 1 cut(s) 959
HaeII RGCGCY 2 cut(s) 47, 657
HaeIII GGCC 6 cut(s) 5, 58, 272, 950, 962, 1358
HapII CCGG 3 cut(s) 485, 820, 1418
HgaI GACGC 2 cut(s) 125, 1078
HhaI GCGC 3 cut(s) 46, 121, 656
Hin1I GRCGYC 1 cut(s) 1070
Hin1II CATG 5 cut(s) 422, 613, 710, 1054, 1154
Hin6I GCGC 3 cut(s) 44, 119, 654
HinP1I GCGC 3 cut(s) 44, 119, 654
HindIII AAGCTT 1 cut(s) 857
HinfI GANTC 9 cut(s) 80, 104, 152, 226, 284, 392, 398, 522, 1159
HpaII CCGG 3 cut(s) 485, 820, 1418
HphI GGTGA 7 cut(s) 335, 604, 689, 719, 909, 1339, 1435
Hpy166II GTNNAC 3 cut(s) 351, 1209, 1290
Hpy8I GTNNAC 3 cut(s) 351, 1209, 1290
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 6 cut(s) 583, 589, 685, 838, 928, 974
HpyCH4III ACNGT 5 cut(s) 97, 481, 725, 1190, 1264
HpyCH4IV ACGT 2 cut(s) 264, 353
HpyCH4V TGCA 6 cut(s) 176, 1040, 1100, 1197, 1250, 1290
HpyF10VI GCNNNNNNNGC 5 cut(s) 55, 74, 197, 1106, 1115
HpyF3I CTNAG 5 cut(s) 280, 572, 1146, 1341, 1537
HpySE526I ACGT 2 cut(s) 264, 353
Hsp92I GRCGYC 1 cut(s) 1070
Hsp92II CATG 5 cut(s) 422, 613, 710, 1054, 1154
HspAI GCGC 3 cut(s) 44, 119, 654
Ksp22I TGATCA 1 cut(s) 1053
Kzo9I GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
LguI GCTCTTC 2 cut(s) 306, 429
LmnI GCTCC 6 cut(s) 546, 618, 978, 1027, 1303, 1311
Lsp1109I GCAGC 4 cut(s) 123, 209, 328, 451
LweI GCATC 1 cut(s) 589
MaeI CTAG 1 cut(s) 885
MaeII ACGT 2 cut(s) 264, 353
MaeIII GTNAC 6 cut(s) 260, 725, 737, 1190, 1234, 1427
MalI GATC 9 cut(s) 276, 449, 650, 672, 864, 906, 1055, 1221, 1520
MboI GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
MboII GAAGA 7 cut(s) 125, 176, 218, 293, 446, 521, 551
MflI RGATCY 2 cut(s) 670, 1219
MhlI GDGCHC 4 cut(s) 1292, 1308, 1353, 1406
MlsI TGGCCA 1 cut(s) 950
MluCI AATT 7 cut(s) 461, 770, 913, 982, 992, 1239, 1542
MluNI TGGCCA 1 cut(s) 950
MlyI GAGTC 3 cut(s) 113, 161, 531
MmeI TCCRAC 1 cut(s) 1297
Mox20I TGGCCA 1 cut(s) 950
MroXI GAANNNNTTC 1 cut(s) 641
MscI TGGCCA 1 cut(s) 950
MseI TTAA 2 cut(s) 1242, 1546
MslI CAYNNNNRTG 2 cut(s) 1295, 1397
Msp20I TGGCCA 1 cut(s) 950
MspA1I CMGCKG 2 cut(s) 136, 200
MspI CCGG 3 cut(s) 485, 820, 1418
MspR9I CCNGG 5 cut(s) 54, 326, 486, 921, 977
Mva1269I GAATGC 1 cut(s) 1040
MvaI CCWGG 4 cut(s) 54, 326, 921, 977
MvnI CGCG 1 cut(s) 119
MwoI GCNNNNNNNGC 5 cut(s) 55, 74, 197, 1106, 1115
NciI CCSGG 1 cut(s) 486
NdeII GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
NlaIII CATG 5 cut(s) 422, 613, 710, 1054, 1154
NlaIV GGNNCC 2 cut(s) 925, 1221
NmeAIII GCCGAG 1 cut(s) 1098
NmuCI GTSAC 2 cut(s) 725, 1190
NspI RCATGY 1 cut(s) 1154
NspV TTCGAA 1 cut(s) 853
OliI CACNNNNGTG 1 cut(s) 1295
PagI TCATGA 1 cut(s) 418
PciSI GCTCTTC 2 cut(s) 306, 429
PcsI WCGNNNNNNNCGW 4 cut(s) 270, 546, 1076, 1527
PctI GAATGC 1 cut(s) 1040
PdmI GAANNNNTTC 1 cut(s) 641
PfeI GAWTC 6 cut(s) 80, 226, 284, 392, 398, 1159
PflMI CCANNNNNTGG 2 cut(s) 630, 1299
PfoI TCCNGGA 2 cut(s) 324, 975
PinAI ACCGGT 1 cut(s) 1417
PleI GAGTC 3 cut(s) 112, 160, 530
PpsI GAGTC 3 cut(s) 112, 160, 530
Psp124BI GAGCTC 1 cut(s) 1308
Psp6I CCWGG 4 cut(s) 52, 324, 919, 975
PspEI GGTNACC 1 cut(s) 725
PspFI CCCAGC 1 cut(s) 1105
PspGI CCWGG 4 cut(s) 52, 324, 919, 975
PspN4I GGNNCC 2 cut(s) 925, 1221
PspPI GGNCC 3 cut(s) 56, 923, 961
PstNI CAGNNNCTG 3 cut(s) 155, 445, 1229
PsuI RGATCY 2 cut(s) 670, 1219
RsaI GTAC 5 cut(s) 483, 713, 776, 1136, 1508
RsaNI GTAC 5 cut(s) 482, 712, 775, 1135, 1507
RseI CAYNNNNRTG 2 cut(s) 1295, 1397
SacI GAGCTC 1 cut(s) 1308
SapI GCTCTTC 2 cut(s) 306, 429
SaqAI TTAA 2 cut(s) 1242, 1546
Sau3AI GATC 9 cut(s) 274, 447, 648, 670, 862, 904, 1053, 1219, 1518
Sau96I GGNCC 3 cut(s) 56, 923, 961
SchI GAGTC 3 cut(s) 113, 161, 531
ScrFI CCNGG 5 cut(s) 54, 326, 486, 921, 977
SduI GDGCHC 4 cut(s) 1292, 1308, 1353, 1406
SfaNI GCATC 1 cut(s) 589
SfuI TTCGAA 1 cut(s) 853
SinI GGWCC 1 cut(s) 923
SmiMI CAYNNNNRTG 2 cut(s) 1295, 1397
SmlI CTYRAG 5 cut(s) 533, 563, 908, 1174, 1466
SmoI CTYRAG 5 cut(s) 533, 563, 908, 1174, 1466
Sse9I AATT 7 cut(s) 461, 770, 913, 982, 992, 1239, 1542
SspMI CTAG 1 cut(s) 885
SstI GAGCTC 1 cut(s) 1308
StyD4I CCNGG 5 cut(s) 52, 324, 484, 919, 975
StyI CCWWGG 1 cut(s) 1025
TaaI ACNGT 5 cut(s) 97, 481, 725, 1190, 1264
TaiI ACGT 2 cut(s) 267, 356
TaqI TCGA 7 cut(s) 450, 853, 943, 1182, 1487, 1521, 1530
TasI AATT 7 cut(s) 461, 770, 913, 982, 992, 1239, 1542
TatI WGTACW 2 cut(s) 1134, 1506
TauI GCSGC 6 cut(s) 49, 52, 68, 194, 197, 500
TfiI GAWTC 6 cut(s) 80, 226, 284, 392, 398, 1159
Tru1I TTAA 2 cut(s) 1242, 1546
Tru9I TTAA 2 cut(s) 1242, 1546
TscAI CASTG 2 cut(s) 192, 450
TseFI GTSAC 2 cut(s) 725, 1190
TseI GCWGC 4 cut(s) 136, 197, 316, 439
Tsp45I GTSAC 2 cut(s) 725, 1190
TspDTI ATGAA 3 cut(s) 435, 695, 1428
TspGWI ACGGA 2 cut(s) 1050, 1298
TspRI CASTG 2 cut(s) 192, 450
Van91I CCANNNNNTGG 2 cut(s) 630, 1299
VneI GTGCAC 1 cut(s) 1288
VpaK11BI GGWCC 1 cut(s) 923
XapI RAATTY 3 cut(s) 913, 992, 1542
XceI RCATGY 1 cut(s) 1154
XmnI GAANNNNTTC 1 cut(s) 641
XspI CTAG 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.