Rw7G032890

Patellin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0012299
Physical Location & Seq
Forward (+)
48180739 .. 48182996
2258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G032890.1

Sequence Viewer

Length: 1551 bp
ATGGCTGATGAAACCCCCGTAACCACCCCACCACCGGTAGACCAACCACCTTTCGCGGTGGTTGAGTCCGAATCGCCTTCTGTAGCCGAAAAACTCGATTCTAAAGAAGACCCACTTCCACCGGCGCCATTACCAGAAGTGACAGAGTCTGCCAAGGAAGAAGAGCCACCGCTAGAGCTGCCTCACGAGTCTCCTCCTGAGGTGAAGGCTAAGTCCGAGGAGGAGGTTTTAGTTGTTGGGTCTGTGCAGGCCAAGGAGGGTGAGGAACCAAAGATTCGGAAACCGATTCCGCAGTCTCTGGTTTCGTTCAAAGAGGAAAGCAATATAGTGGCGGATCTCTCAGATTCCGAGAGGAAAGCACTTCAAGAACTGAAGCAGCTCGTCCAGGAGGCTCTCAACACTCGCCAGTTCACTTCCCCAAAACAAGAACCGCTCCATGAGCCCAAAATCGAGGAGAACCCAGTGAAGGAAGCAGAGGAAGTAGCTAAGGAAACATCGCAGCTGGCGATTTCTCCAGAGGAGGTTTCAATTTGGGGTGTTCCGCTGCTCAAGGACGACAGGAGCGATGTGATTCTTCTCAAGTTCCTGAGGGCTCGGGACTTCAAGGTGAGAGATGCTTTTGTTATGCTCCGAAACACGATCCAGTGGAGGAAGAAGTTTGGGATCGATGCTCTTGTGGACGAAGATCTTGGTGATGATTTGGAGAAAGTGGTTTTTATGCATGGGTATGACAGAGAGGGTCACCCTGTGTGTTACAATGTGTTTGGGGAGTTTCAGAACAAGGAGCTGTATCAGAAGACCTTTTTGGATGAGGAAAAGAGAACCAAGTTTCTCCGGTGGCGGATTCAGTTCTTGGAGAGAAGCATTAGGAAGCTGGATTTCAGCCCTGGTGGTGTTTGCACTATTTTTCAGGTTAATGATCTTAAGAATTCTCCTGGCCCTGCAAAGAGTGAGCTTCGCTTGGCCACCAAACAAGCCCTTCAGTTGCTTCAGGACAATTATCCCGAGTTTGTAGTCAAACAGGTGTTTGTCAATGCTCCTTGGTGGTATCTTGCGTTCTACACATTGATCAGTCCCTTCATGACACAGAGGACCAAAAGCAAGTTTGTCTTTGCAAGCCCAGCCAAATCTGCAGAGACCCTTTTCAAGTACATTTCTGCTGAGCATGTTCCTATACAATATGGGGGTTTGAGTGTGGATTACTGTGAGTGCAACCCAGAATTCACGATTGCTGATCCAGTCACTGATGTAACCATCAAACCTGGAACAAAGAAGACTGTGGAAATTATAATTTATGAGAAGTGCACCATCGTGTGGGAACTTCGTGTAGTTGGGTGGGAGGTGAGCTACAGTGCTGAGTTTGTTCCCGACTCTCAAGATGCATATACACTGATCATTCAAAAAGCCACAAAGATGGCCCCAACTGATGAACCAGTGCTGCCTCACAGGTTCAAAGTTGGCGAGCTGGGTAAAATATTGCTCACCATTGACAATCCAACCTCAAAGAAGAAGAGGCTTCTGTACAGGTTCAAGGTCGAACCCTCCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

516

Amino Acids

58.82

Weight (kDa)

5.13

Isoelectric Point (pI)

55.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 121 - 212 1.5e-10 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 236 - 396 9.1e-31 CRAL/TRIO domain
GOLD_PATL1_C PF25099 420 - 504 7.3e-36 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012299)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72160
fragaria_vesca FvH4_5g31710 FvH4_5g31710
malus_domestica MD08G1218000.v1.1 MD15G1405900.v1.1
prunus_persica Prupe.1G555300_v2.0.a1
pyrus_communis pycom08g18900 pycom15g36270
rosa_chinensis RchiOBHm_Chr7g0227591
rosa_laevigata RLG00000001634
rosa_multiflora Rmu_sc0001772.1_g000008
rosa_roxburghii Rroxscaffold_3G00232020
rosa_rugosa Rorug07G0242000 Rorug07G0242100
rosa_samantha Rh7AG395500 Rh7BG377300 Rh7CG414200 Rh7DG391300
rosa_wichuraiana Rw7G032890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1289
AccB1I GGYRCC 1 cut(s) 124
AccB7I CCANNNNNTGG 1 cut(s) 1314
AccBSI CCGCTC 1 cut(s) 433
AccI GTMKAC 1 cut(s) 39
AccII CGCG 1 cut(s) 56
AciI CCGC 7 cut(s) 56, 170, 290, 332, 431, 542, 841
AclWI GGATC 4 cut(s) 342, 634, 671, 1229
AcoI YGGCCR 1 cut(s) 963
AcsI RAATTY 2 cut(s) 928, 1220
AcuI CTGAAG 3 cut(s) 392, 965, 974
AcyI GRCGYC 1 cut(s) 125
AdeI CACNNNGTG 1 cut(s) 748
AfaI GTAC 2 cut(s) 1151, 1523
AfiI CCNNNNNNNGG 3 cut(s) 34, 466, 1314
AflII CTTAAG 1 cut(s) 923
AgeI ACCGGT 1 cut(s) 34
AgsI TTSAA 8 cut(s) 310, 365, 528, 604, 1147, 1400, 1453, 1531
AjnI CCWGG 4 cut(s) 384, 886, 934, 1261
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
AleI CACNNNNGTG 1 cut(s) 1310
AluBI AGCT 9 cut(s) 178, 379, 485, 502, 787, 874, 955, 1347, 1465
AluI AGCT 9 cut(s) 178, 379, 485, 502, 787, 874, 955, 1347, 1465
Alw21I GWGCWC 1 cut(s) 1307
Alw26I GTCTC 3 cut(s) 195, 300, 1130
Alw44I GTGCAC 1 cut(s) 1303
AlwI GGATC 4 cut(s) 342, 634, 671, 1229
AlwNI CAGNNNCTG 3 cut(s) 149, 298, 1244
Ama87I CYCGRG 2 cut(s) 594, 1004
AoxI GGCC 4 cut(s) 249, 937, 963, 1416
ApaLI GTGCAC 1 cut(s) 1303
ApeKI GCWGC 5 cut(s) 178, 376, 499, 544, 1438
ApoI RAATTY 2 cut(s) 928, 1220
AsiGI ACCGGT 1 cut(s) 34
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 3 cut(s) 938, 1092, 1417
AsuHPI GGTGA 7 cut(s) 214, 272, 619, 704, 734, 1354, 1474
AvaI CYCGRG 2 cut(s) 594, 1004
AvaII GGWCC 1 cut(s) 1092
AxyI CCTNAGG 2 cut(s) 198, 587
BaeGI GKGCMC 1 cut(s) 1307
BalI TGGCCA 1 cut(s) 965
BanI GGYRCC 1 cut(s) 124
BanII GRGCYC 2 cut(s) 444, 595
BauI CACGAG 1 cut(s) 185
BbsI GAAGAC 3 cut(s) 114, 803, 1280
Bbv12I GWGCWC 1 cut(s) 1307
BbvI GCAGC 5 cut(s) 165, 388, 511, 531, 1425
BccI CCATC 3 cut(s) 1262, 1316, 1408
BciT130I CCWGG 4 cut(s) 386, 888, 936, 1263
BclI TGATCA 2 cut(s) 1068, 1392
BcoDI GTCTC 3 cut(s) 195, 300, 1130
BfaI CTAG 1 cut(s) 173
BfmI CTRYAG 3 cut(s) 81, 1131, 1348
BfoI RGCGCY 1 cut(s) 128
BfrI CTTAAG 1 cut(s) 923
BglII AGATCT 1 cut(s) 685
BisI GCNGC 5 cut(s) 179, 377, 500, 545, 1439
BlpI GCTNAGC 1 cut(s) 1161
BlsI GCNGC 5 cut(s) 180, 378, 501, 546, 1440
Bme1390I CCNGG 4 cut(s) 386, 888, 936, 1263
Bme18I GGWCC 1 cut(s) 1092
BmeT110I CYCGRG 2 cut(s) 594, 1004
BmgT120I GGNCC 3 cut(s) 938, 1092, 1417
BmiI GGNNCC 3 cut(s) 126, 267, 1419
BmrFI CCNGG 4 cut(s) 386, 888, 936, 1263
BmrI ACTGGG 1 cut(s) 455
BmsI GCATC 3 cut(s) 604, 658, 1369
BmuI ACTGGG 1 cut(s) 455
BpiI GAAGAC 3 cut(s) 114, 803, 1280
BpmI CTGGAG 1 cut(s) 498
Bpu10I CCTNAGC 1 cut(s) 486
Bpu1102I GCTNAGC 1 cut(s) 1161
BpuEI CTTGAG 3 cut(s) 533, 563, 1359
Bsa29I ATCGAT 1 cut(s) 666
BsaHI GRCGYC 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 5 cut(s) 153, 216, 252, 886, 1040
BsaWI WCCGGW 2 cut(s) 34, 834
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 466, 1314
Bse118I RCCGGY 2 cut(s) 34, 121
Bse1I ACTGG 5 cut(s) 406, 461, 643, 1238, 1433
Bse21I CCTNAGG 2 cut(s) 198, 587
BseBI CCWGG 4 cut(s) 386, 888, 936, 1263
BseCI ATCGAT 1 cut(s) 666
BseDI CCNNGG 5 cut(s) 153, 216, 252, 886, 1040
BseGI GGATG 1 cut(s) 814
BseLI CCNNNNNNNGG 3 cut(s) 34, 466, 1314
BseMII CTCAG 5 cut(s) 189, 354, 578, 1152, 1347
BseNI ACTGG 5 cut(s) 406, 461, 643, 1238, 1433
BseRI GAGGAG 5 cut(s) 183, 233, 236, 467, 533
BseSI GKGCMC 1 cut(s) 1307
BseXI GCAGC 5 cut(s) 165, 388, 511, 531, 1425
BseYI CCCAGC 2 cut(s) 1120, 1465
BsgI GTGCAG 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 4 cut(s) 251, 939, 965, 1418
BshNI GGYRCC 1 cut(s) 124
BshTI ACCGGT 1 cut(s) 34
BshVI ATCGAT 1 cut(s) 666
BsiHKAI GWGCWC 1 cut(s) 1307
BsiHKCI CYCGRG 2 cut(s) 594, 1004
BsiSI CCGG 3 cut(s) 35, 122, 835
BslFI GGGAC 2 cut(s) 611, 1059
BslI CCNNNNNNNGG 3 cut(s) 34, 466, 1314
BsmAI GTCTC 3 cut(s) 195, 300, 1130
BsmFI GGGAC 2 cut(s) 611, 1059
BsnI GGCC 4 cut(s) 251, 939, 965, 1418
Bso31I GGTCTC 1 cut(s) 1130
BsoBI CYCGRG 2 cut(s) 594, 1004
Bsp1286I GDGCHC 3 cut(s) 444, 595, 1307
Bsp1407I TGTACA 1 cut(s) 1521
Bsp143I GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
Bsp1720I GCTNAGC 1 cut(s) 1161
BspACI CCGC 7 cut(s) 56, 170, 290, 332, 431, 542, 841
BspANI GGCC 4 cut(s) 251, 939, 965, 1418
BspCNI CTCAG 5 cut(s) 190, 353, 579, 1153, 1348
BspDI ATCGAT 1 cut(s) 666
BspFNI CGCG 1 cut(s) 56
BspHI TCATGA 1 cut(s) 1080
BspLI GGNNCC 3 cut(s) 126, 267, 1419
BspMAI CTGCAG 1 cut(s) 1135
BspPI GGATC 4 cut(s) 342, 634, 671, 1229
BspQI GCTCTTC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 124
BspTI CTTAAG 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 1130
BsrBI CCGCTC 1 cut(s) 433
BsrFI RCCGGY 2 cut(s) 34, 121
BsrGI TGTACA 1 cut(s) 1521
BsrI ACTGG 5 cut(s) 406, 461, 643, 1238, 1433
BssAI RCCGGY 2 cut(s) 34, 121
BssECI CCNNGG 5 cut(s) 153, 216, 252, 886, 1040
BssMI GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
BssNI GRCGYC 1 cut(s) 125
BssSI CACGAG 1 cut(s) 185
BssT1I CCWWGG 3 cut(s) 153, 252, 1040
Bst2BI CACGAG 1 cut(s) 185
Bst2UI CCWGG 4 cut(s) 386, 888, 936, 1263
Bst4CI ACNGT 3 cut(s) 1205, 1279, 1352
Bst6I CTCTTC 2 cut(s) 156, 1505
BstACI GRCGYC 1 cut(s) 125
BstAFI CTTAAG 1 cut(s) 923
BstAUI TGTACA 1 cut(s) 1521
BstC8I GCNNGC 4 cut(s) 249, 504, 1117, 1463
BstDEI CTNAG 7 cut(s) 198, 210, 340, 486, 587, 1161, 1356
BstEII GGTNACC 1 cut(s) 740
BstF5I GGATG 1 cut(s) 814
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 1 cut(s) 127
BstKTI GATC 8 cut(s) 337, 642, 666, 688, 922, 1071, 1237, 1395
BstMAI GTCTC 3 cut(s) 195, 300, 1130
BstMBI GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
BstMWI GCNNNNNNNGC 4 cut(s) 178, 439, 1121, 1130
BstNI CCWGG 4 cut(s) 386, 888, 936, 1263
BstNSI RCATGY 1 cut(s) 1169
BstPI GGTNACC 1 cut(s) 740
BstSCI CCNGG 4 cut(s) 384, 886, 934, 1261
BstSFI CTRYAG 3 cut(s) 81, 1131, 1348
BstSLI GKGCMC 1 cut(s) 1307
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 5 cut(s) 165, 388, 511, 531, 1425
BstV2I GAAGAC 3 cut(s) 114, 803, 1280
BstX2I RGATCY 2 cut(s) 334, 685
BstXI CCANNNNNNTGG 1 cut(s) 1414
BstYI RGATCY 2 cut(s) 334, 685
Bsu15I ATCGAT 1 cut(s) 666
Bsu36I CCTNAGG 2 cut(s) 198, 587
BsuRI GGCC 4 cut(s) 251, 939, 965, 1418
BsuTUI ATCGAT 1 cut(s) 666
BtgZI GCGATG 2 cut(s) 480, 579
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 6 cut(s) 468, 650, 1242, 1357, 1388, 1440
Cac8I GCNNGC 4 cut(s) 249, 504, 1117, 1463
CaiI CAGNNNCTG 3 cut(s) 149, 298, 1244
CciI TCATGA 1 cut(s) 1080
CfoI GCGC 1 cut(s) 127
Cfr10I RCCGGY 2 cut(s) 34, 121
Cfr13I GGNCC 3 cut(s) 938, 1092, 1417
ClaI ATCGAT 1 cut(s) 666
Csp6I GTAC 2 cut(s) 1150, 1522
CspAI ACCGGT 1 cut(s) 34
CviAII CATG 4 cut(s) 437, 722, 1081, 1166
CviQI GTAC 2 cut(s) 1150, 1522
DdeI CTNAG 7 cut(s) 198, 210, 340, 486, 587, 1161, 1356
DinI GGCGCC 1 cut(s) 126
DpnI GATC 8 cut(s) 336, 641, 665, 687, 921, 1070, 1236, 1394
DpnII GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
DraIII CACNNNGTG 1 cut(s) 748
EaeI YGGCCR 1 cut(s) 963
Eam1104I CTCTTC 2 cut(s) 156, 1505
EarI CTCTTC 2 cut(s) 156, 1505
EciI GGCGGA 2 cut(s) 347, 856
Eco130I CCWWGG 3 cut(s) 153, 252, 1040
Eco24I GRGCYC 2 cut(s) 444, 595
Eco31I GGTCTC 1 cut(s) 1130
Eco47I GGWCC 1 cut(s) 1092
Eco57I CTGAAG 3 cut(s) 392, 965, 974
Eco81I CCTNAGG 2 cut(s) 198, 587
Eco88I CYCGRG 2 cut(s) 594, 1004
Eco91I GGTNACC 1 cut(s) 740
EcoO65I GGTNACC 1 cut(s) 740
EcoRI GAATTC 2 cut(s) 928, 1220
EcoRII CCWGG 4 cut(s) 384, 886, 934, 1261
EcoT14I CCWWGG 3 cut(s) 153, 252, 1040
EcoT22I ATGCAT 2 cut(s) 723, 1384
EcoT38I GRGCYC 2 cut(s) 444, 595
EgeI GGCGCC 1 cut(s) 126
EheI GGCGCC 1 cut(s) 126
ErhI CCWWGG 3 cut(s) 153, 252, 1040
FaeI CATG 4 cut(s) 440, 725, 1084, 1169
FalI AAGNNNNNCTT 4 cut(s) 99, 131, 1094, 1126
FaqI GGGAC 2 cut(s) 611, 1059
FatI CATG 4 cut(s) 436, 721, 1080, 1165
FbaI TGATCA 2 cut(s) 1068, 1392
FblI GTMKAC 1 cut(s) 39
Fnu4HI GCNGC 5 cut(s) 179, 377, 500, 545, 1439
FokI GGATG 1 cut(s) 821
FriOI GRGCYC 2 cut(s) 444, 595
Fsp4HI GCNGC 5 cut(s) 179, 377, 500, 545, 1439
FspBI CTAG 1 cut(s) 173
GlaI GCGC 1 cut(s) 126
GluI GCNGC 5 cut(s) 179, 377, 500, 545, 1439
GsaI CCCAGC 2 cut(s) 1124, 1469
GsuI CTGGAG 1 cut(s) 498
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 4 cut(s) 251, 939, 965, 1418
HapII CCGG 3 cut(s) 35, 122, 835
HhaI GCGC 1 cut(s) 127
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 4 cut(s) 440, 725, 1084, 1169
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HpaII CCGG 3 cut(s) 35, 122, 835
HphI GGTGA 7 cut(s) 214, 272, 619, 704, 734, 1354, 1474
Hpy166II GTNNAC 4 cut(s) 40, 411, 679, 1305
Hpy188I TCNGA 8 cut(s) 70, 217, 279, 343, 349, 632, 777, 795
Hpy8I GTNNAC 4 cut(s) 40, 411, 679, 1305
HpyAV CCTTC 5 cut(s) 87, 199, 460, 989, 1087
HpyCH4III ACNGT 3 cut(s) 1205, 1279, 1352
HpyCH4V TGCA 9 cut(s) 247, 721, 900, 944, 1115, 1133, 1212, 1305, 1382
HpyF10VI GCNNNNNNNGC 4 cut(s) 178, 439, 1121, 1130
HpyF3I CTNAG 7 cut(s) 198, 210, 340, 486, 587, 1161, 1356
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 4 cut(s) 440, 725, 1084, 1169
HspAI GCGC 1 cut(s) 125
KasI GGCGCC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 1068, 1392
Kzo9I GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 5 cut(s) 438, 561, 633, 784, 1042
Lsp1109I GCAGC 5 cut(s) 165, 388, 511, 531, 1425
LweI GCATC 3 cut(s) 604, 658, 1369
MaeI CTAG 1 cut(s) 173
MaeIII GTNAC 6 cut(s) 19, 139, 740, 752, 1240, 1249
MalI GATC 8 cut(s) 336, 641, 665, 687, 921, 1070, 1236, 1394
MbiI CCGCTC 1 cut(s) 433
MboI GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
MflI RGATCY 2 cut(s) 334, 685
MhlI GDGCHC 3 cut(s) 444, 595, 1307
MlsI TGGCCA 1 cut(s) 965
MluCI AATT 6 cut(s) 528, 928, 997, 1220, 1284, 1290
MluNI TGGCCA 1 cut(s) 965
Mly113I GGCGCC 1 cut(s) 125
MlyI GAGTC 4 cut(s) 74, 155, 197, 1364
MmeI TCCRAC 1 cut(s) 1520
Mox20I TGGCCA 1 cut(s) 965
Mph1103I ATGCAT 2 cut(s) 723, 1384
MscI TGGCCA 1 cut(s) 965
MseI TTAA 2 cut(s) 915, 924
MslI CAYNNNNRTG 3 cut(s) 726, 1310, 1412
Msp20I TGGCCA 1 cut(s) 965
MspA1I CMGCKG 2 cut(s) 502, 544
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 3 cut(s) 35, 122, 835
MspR9I CCNGG 4 cut(s) 386, 888, 936, 1263
MvaI CCWGG 4 cut(s) 386, 888, 936, 1263
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 4 cut(s) 178, 439, 1121, 1130
NarI GGCGCC 1 cut(s) 125
NdeII GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
NlaIII CATG 4 cut(s) 440, 725, 1084, 1169
NlaIV GGNNCC 3 cut(s) 126, 267, 1419
NmuCI GTSAC 3 cut(s) 139, 740, 1240
NsiI ATGCAT 2 cut(s) 723, 1384
NspI RCATGY 1 cut(s) 1169
OliI CACNNNNGTG 1 cut(s) 1310
PagI TCATGA 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 2 cut(s) 503, 561
PfeI GAWTC 7 cut(s) 71, 98, 274, 286, 344, 571, 844
PflFI GACNNNGTC 1 cut(s) 145
PflMI CCANNNNNTGG 1 cut(s) 1314
PfoI TCCNGGA 1 cut(s) 384
PinAI ACCGGT 1 cut(s) 34
PkrI GCNGC 5 cut(s) 180, 378, 501, 546, 1440
PleI GAGTC 4 cut(s) 73, 154, 196, 1364
PluTI GGCGCC 1 cut(s) 128
PpsI GAGTC 4 cut(s) 73, 154, 196, 1364
PsiI TTATAA 1 cut(s) 1289
Psp6I CCWGG 4 cut(s) 384, 886, 934, 1261
PspEI GGTNACC 1 cut(s) 740
PspFI CCCAGC 2 cut(s) 1120, 1465
PspGI CCWGG 4 cut(s) 384, 886, 934, 1261
PspN4I GGNNCC 3 cut(s) 126, 267, 1419
PspPI GGNCC 3 cut(s) 938, 1092, 1417
PsrI GAACNNNNNNTAC 2 cut(s) 1040, 1072
PstI CTGCAG 1 cut(s) 1135
PstNI CAGNNNCTG 3 cut(s) 149, 298, 1244
PsuI RGATCY 2 cut(s) 334, 685
PsyI GACNNNGTC 1 cut(s) 145
PvuII CAGCTG 1 cut(s) 502
RsaI GTAC 2 cut(s) 1151, 1523
RsaNI GTAC 2 cut(s) 1150, 1522
RseI CAYNNNNRTG 3 cut(s) 726, 1310, 1412
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 2 cut(s) 915, 924
SatI GCNGC 5 cut(s) 179, 377, 500, 545, 1439
Sau3AI GATC 8 cut(s) 334, 639, 663, 685, 919, 1068, 1234, 1392
Sau96I GGNCC 3 cut(s) 938, 1092, 1417
SchI GAGTC 4 cut(s) 74, 155, 197, 1364
ScrFI CCNGG 4 cut(s) 386, 888, 936, 1263
SduI GDGCHC 3 cut(s) 444, 595, 1307
SfaNI GCATC 3 cut(s) 604, 658, 1369
SfcI CTRYAG 3 cut(s) 81, 1131, 1348
SfoI GGCGCC 1 cut(s) 126
SgrAI CRCCGGYG 1 cut(s) 121
SinI GGWCC 1 cut(s) 1092
SmiMI CAYNNNNRTG 3 cut(s) 726, 1310, 1412
SmlI CTYRAG 4 cut(s) 548, 578, 923, 1374
SmoI CTYRAG 4 cut(s) 548, 578, 923, 1374
Sse9I AATT 6 cut(s) 528, 928, 997, 1220, 1284, 1290
SsiI CCGC 7 cut(s) 56, 170, 290, 332, 431, 542, 841
SspDI GGCGCC 1 cut(s) 124
SspI AATATT 1 cut(s) 1476
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 4 cut(s) 384, 886, 934, 1261
StyI CCWWGG 3 cut(s) 153, 252, 1040
TaaI ACNGT 3 cut(s) 1205, 1279, 1352
TaqI TCGA 4 cut(s) 96, 450, 666, 1536
TasI AATT 6 cut(s) 528, 928, 997, 1220, 1284, 1290
TatI WGTACW 2 cut(s) 1149, 1521
TfiI GAWTC 7 cut(s) 71, 98, 274, 286, 344, 571, 844
Tru1I TTAA 2 cut(s) 915, 924
Tru9I TTAA 2 cut(s) 915, 924
TscAI CASTG 6 cut(s) 468, 650, 1249, 1357, 1395, 1440
TseFI GTSAC 3 cut(s) 139, 740, 1240
TseI GCWGC 5 cut(s) 178, 376, 499, 544, 1438
Tsp45I GTSAC 3 cut(s) 139, 740, 1240
TspDTI ATGAA 3 cut(s) 24, 1069, 1443
TspRI CASTG 6 cut(s) 468, 650, 1249, 1357, 1395, 1440
Tth111I GACNNNGTC 1 cut(s) 145
Van91I CCANNNNNTGG 1 cut(s) 1314
Vha464I CTTAAG 1 cut(s) 923
VneI GTGCAC 1 cut(s) 1303
VpaK11BI GGWCC 1 cut(s) 1092
XapI RAATTY 2 cut(s) 928, 1220
XceI RCATGY 1 cut(s) 1169
XmiI GTMKAC 1 cut(s) 39
XspI CTAG 1 cut(s) 173
Zsp2I ATGCAT 2 cut(s) 723, 1384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.