No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22630 |
| fragaria_vesca | FvH4_5g32101 |
| malus_domestica | MD15G1408300.v1.1 |
| prunus_persica | Prupe.1G552800_v2.0.a1 Prupe.1G552800_v2.0.a1 |
| pyrus_communis | pycom15g36460 |
| rosa_chinensis | RchiOBHm_Chr7g0228151 |
| rosa_laevigata | RLG00000001584 |
| rosa_multiflora | Rmu_sc0001488.1_g000013 Rmu_sc0012031.1_g000015 Rmu_sc0021525.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00231360 |
| rosa_rugosa | Rorug07G0245900 Rorug07G0245900 Rorug07G0246000 Rorug07G0246100 |
| rosa_samantha | Rh7AG400200 Rh7BG381500 Rh7CG418400 Rh7DG396300 |
| rosa_wichuraiana | Rw0G005110 Rw0G011080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 230 |
| AccBSI | CCGCTC | 1 cut(s) | 152 |
| AciI | CCGC | 1 cut(s) | 152 |
| AclWI | GGATC | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 141 |
| AfaI | GTAC | 1 cut(s) | 265 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 353 |
| AgsI | TTSAA | 1 cut(s) | 208 |
| AjiI | CACGTC | 1 cut(s) | 102 |
| AluBI | AGCT | 1 cut(s) | 161 |
| AluI | AGCT | 1 cut(s) | 161 |
| AlwI | GGATC | 1 cut(s) | 106 |
| AoxI | GGCC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 3 cut(s) | 71, 158, 167 |
| ApoI | RAATTY | 1 cut(s) | 141 |
| AspLEI | GCGC | 1 cut(s) | 76 |
| AsuHPI | GGTGA | 1 cut(s) | 57 |
| AsuII | TTCGAA | 1 cut(s) | 145 |
| BbvI | GCAGC | 3 cut(s) | 83, 154, 170 |
| BccI | CCATC | 1 cut(s) | 297 |
| BfoI | RGCGCY | 1 cut(s) | 77 |
| BfuAI | ACCTGC | 1 cut(s) | 230 |
| BisI | GCNGC | 3 cut(s) | 72, 159, 168 |
| BlsI | GCNGC | 3 cut(s) | 73, 160, 169 |
| BmgBI | CACGTC | 1 cut(s) | 102 |
| BmsI | GCATC | 1 cut(s) | 245 |
| Bpu14I | TTCGAA | 1 cut(s) | 145 |
| BsaJI | CCNNGG | 2 cut(s) | 86, 322 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 37, 67 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 353 |
| Bse118I | RCCGGY | 2 cut(s) | 67, 76 |
| BseDI | CCNNGG | 2 cut(s) | 86, 322 |
| BseGI | GGATG | 3 cut(s) | 58, 260, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 353 |
| BseMII | CTCAG | 1 cut(s) | 130 |
| BseRI | GAGGAG | 2 cut(s) | 45, 75 |
| BseXI | GCAGC | 3 cut(s) | 83, 154, 170 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| BshFI | GGCC | 1 cut(s) | 91 |
| BsiSI | CCGG | 2 cut(s) | 68, 77 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 353 |
| BsnI | GGCC | 1 cut(s) | 91 |
| Bsp119I | TTCGAA | 1 cut(s) | 145 |
| Bsp143I | GATC | 2 cut(s) | 111, 201 |
| BspACI | CCGC | 1 cut(s) | 152 |
| BspANI | GGCC | 1 cut(s) | 91 |
| BspCNI | CTCAG | 1 cut(s) | 129 |
| BspMI | ACCTGC | 1 cut(s) | 230 |
| BspPI | GGATC | 1 cut(s) | 106 |
| BspQI | GCTCTTC | 1 cut(s) | 142 |
| BspT104I | TTCGAA | 1 cut(s) | 145 |
| BsrBI | CCGCTC | 1 cut(s) | 152 |
| BsrFI | RCCGGY | 2 cut(s) | 67, 76 |
| BssAI | RCCGGY | 2 cut(s) | 67, 76 |
| BssECI | CCNNGG | 2 cut(s) | 86, 322 |
| BssMI | GATC | 2 cut(s) | 111, 201 |
| BssT1I | CCWWGG | 1 cut(s) | 322 |
| Bst4CI | ACNGT | 1 cut(s) | 248 |
| Bst6I | CTCTTC | 1 cut(s) | 142 |
| BstBI | TTCGAA | 1 cut(s) | 145 |
| BstDEI | CTNAG | 1 cut(s) | 116 |
| BstF5I | GGATG | 3 cut(s) | 58, 260, 339 |
| BstH2I | RGCGCY | 1 cut(s) | 77 |
| BstHHI | GCGC | 1 cut(s) | 76 |
| BstKTI | GATC | 2 cut(s) | 114, 204 |
| BstMBI | GATC | 2 cut(s) | 111, 201 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 164, 167 |
| BstV1I | GCAGC | 3 cut(s) | 83, 154, 170 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 329 |
| BsuRI | GGCC | 1 cut(s) | 91 |
| BtgZI | GCGATG | 1 cut(s) | 316 |
| BtrI | CACGTC | 1 cut(s) | 102 |
| BtsCI | GGATG | 3 cut(s) | 58, 260, 339 |
| BveI | ACCTGC | 1 cut(s) | 230 |
| CfoI | GCGC | 1 cut(s) | 76 |
| Cfr10I | RCCGGY | 2 cut(s) | 67, 76 |
| Csp6I | GTAC | 1 cut(s) | 264 |
| CviAII | CATG | 1 cut(s) | 25 |
| CviJI | RGCY | 3 cut(s) | 91, 138, 161 |
| CviKI_1 | RGCY | 3 cut(s) | 91, 138, 161 |
| CviQI | GTAC | 1 cut(s) | 264 |
| DdeI | CTNAG | 1 cut(s) | 116 |
| DpnI | GATC | 2 cut(s) | 113, 203 |
| DpnII | GATC | 2 cut(s) | 111, 201 |
| Eam1104I | CTCTTC | 1 cut(s) | 142 |
| EarI | CTCTTC | 1 cut(s) | 142 |
| Eco130I | CCWWGG | 1 cut(s) | 322 |
| EcoRI | GAATTC | 1 cut(s) | 141 |
| EcoT14I | CCWWGG | 1 cut(s) | 322 |
| ErhI | CCWWGG | 1 cut(s) | 322 |
| FaeI | CATG | 1 cut(s) | 28 |
| FaiI | YATR | 2 cut(s) | 26, 135 |
| FatI | CATG | 1 cut(s) | 24 |
| FauI | CCCGC | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 159, 168 |
| FokI | GGATG | 3 cut(s) | 45, 267, 346 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 159, 168 |
| GlaI | GCGC | 1 cut(s) | 75 |
| GluI | GCNGC | 3 cut(s) | 72, 159, 168 |
| HaeII | RGCGCY | 1 cut(s) | 77 |
| HaeIII | GGCC | 1 cut(s) | 91 |
| HapII | CCGG | 2 cut(s) | 68, 77 |
| HhaI | GCGC | 1 cut(s) | 76 |
| Hin1II | CATG | 1 cut(s) | 28 |
| Hin6I | GCGC | 1 cut(s) | 74 |
| HinP1I | GCGC | 1 cut(s) | 74 |
| HpaII | CCGG | 2 cut(s) | 68, 77 |
| HphI | GGTGA | 1 cut(s) | 57 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 119 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| HpyAV | CCTTC | 5 cut(s) | 72, 102, 221, 264, 331 |
| HpyCH4III | ACNGT | 1 cut(s) | 248 |
| HpyCH4IV | ACGT | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 2 cut(s) | 158, 258 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 164, 167 |
| HpyF3I | CTNAG | 1 cut(s) | 116 |
| HpySE526I | ACGT | 1 cut(s) | 101 |
| Hsp92II | CATG | 1 cut(s) | 28 |
| HspAI | GCGC | 1 cut(s) | 74 |
| Kzo9I | GATC | 2 cut(s) | 111, 201 |
| LguI | GCTCTTC | 1 cut(s) | 142 |
| LmnI | GCTCC | 1 cut(s) | 236 |
| LpnPI | CCDG | 7 cut(s) | 81, 90, 162, 235, 252, 364, 387 |
| Lsp1109I | GCAGC | 3 cut(s) | 83, 154, 170 |
| LweI | GCATC | 1 cut(s) | 245 |
| MaeII | ACGT | 1 cut(s) | 101 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MalI | GATC | 2 cut(s) | 113, 203 |
| MbiI | CCGCTC | 1 cut(s) | 152 |
| MboI | GATC | 2 cut(s) | 111, 201 |
| MboII | GAAGA | 1 cut(s) | 159 |
| MfeI | CAATTG | 1 cut(s) | 240 |
| MluCI | AATT | 2 cut(s) | 141, 240 |
| MnlI | CCTC | 7 cut(s) | 32, 66, 96, 125, 176, 356, 377 |
| MseI | TTAA | 1 cut(s) | 368 |
| MspI | CCGG | 2 cut(s) | 68, 77 |
| MunI | CAATTG | 1 cut(s) | 240 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 164, 167 |
| NdeII | GATC | 2 cut(s) | 111, 201 |
| NlaIII | CATG | 1 cut(s) | 28 |
| NmeAIII | GCCGAG | 1 cut(s) | 67 |
| NspV | TTCGAA | 1 cut(s) | 145 |
| PciSI | GCTCTTC | 1 cut(s) | 142 |
| PkrI | GCNGC | 3 cut(s) | 73, 160, 169 |
| RsaI | GTAC | 1 cut(s) | 265 |
| RsaNI | GTAC | 1 cut(s) | 264 |
| SapI | GCTCTTC | 1 cut(s) | 142 |
| SaqAI | TTAA | 1 cut(s) | 368 |
| SatI | GCNGC | 3 cut(s) | 72, 159, 168 |
| Sau3AI | GATC | 2 cut(s) | 111, 201 |
| SetI | ASST | 6 cut(s) | 43, 104, 163, 215, 224, 353 |
| SfaNI | GCATC | 1 cut(s) | 245 |
| SfuI | TTCGAA | 1 cut(s) | 145 |
| Sse9I | AATT | 2 cut(s) | 141, 240 |
| SsiI | CCGC | 1 cut(s) | 152 |
| SspI | AATATT | 1 cut(s) | 292 |
| StyI | CCWWGG | 1 cut(s) | 322 |
| TaaI | ACNGT | 1 cut(s) | 248 |
| TaiI | ACGT | 1 cut(s) | 104 |
| TaqI | TCGA | 2 cut(s) | 145, 200 |
| TasI | AATT | 2 cut(s) | 141, 240 |
| Tru1I | TTAA | 1 cut(s) | 368 |
| Tru9I | TTAA | 1 cut(s) | 368 |
| TseI | GCWGC | 3 cut(s) | 71, 158, 167 |
| TspDTI | ATGAA | 2 cut(s) | 41, 350 |
| XapI | RAATTY | 1 cut(s) | 141 |