Rorug07G0246000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0009408
Physical Location & Seq
Forward (+)
22807295 .. 22813305
6011 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0246000.1

Sequence Viewer

Length: 2112 bp
ATGAACGACGGAGGTAATAACCAAGCGGACGAGTCTCCGGTGAGAAAGACCAGAAGAGGACGCGGAGGAAGAGGAGGAGGAGGAGGAGTACGGGAACAACACCACCCTTCTCTCCAAATCGACGATGCATTAAAACTCAACGATCTTCAGTCACCTTTGACTTGTCAGCCTCAGACTCATGAACCCACCACCACTTCCACACCCAGAAACCACAGAAATCCGAGGTCGGCATCCAGGAATCGAGGTGCCCATGTATTCAAACCTCGGTTTGTCAAGAAATCTGAGTTGGGTTCTTCTTCTTCTTCGAATGGCCAACTGGGTTCTTCTTCTTCGAATGAGCAACAGCAAGTGGGTTCTTTGAATGATGAGGTGGGGTCTCTGAGTATTGGTGAAGGAGAAAGTGGGCAGCAAGCGAAACAAGAAGAAGAAAAACATGAAGAAAAGAGAGTTGTGGCTAGTGTAGAGAATGCTGCTGAGGTGTCTGAGTGTGGGAAAGGGGAGGATGATGATGCTGTGACAAGATTGGAAGAGCTGCAGCGCGGTGTCGAAGAGCCGGAGTTGTCAGAAGAGCAGCTGAGGATCAATGATCAAGCTCAGGAGGATGAGTTGCTTGCTATGGAGTCCATTTTCGGAGACAACGTTTTCATCCTTGAAAGACAACGAGGCCTTCGATGTTTTCAGATTCATACACACATTGAAGCTCCTGGTGAAATTGCTGTTTCTACTAAGTTGAATTCATCTAGTGACCTTAAGTCCACAAGTAGTAGTTCTGATGACTTCTCATACTCCTTCACAGTCCAGCATCTTCCACCAATTATGTTGACATGTGCGTTACCCAAATCATACCCAAGCCACCAACCACCTTATTTCACACTATCTGTTCAATGGTTGGATTCTGTTAAAATTTCCAATTTGTGTTCCATGCTGGACTCATTATGGATGGACCAACAAGGACAGGAGGTTATATACCAATGGGTGGAATGGCTACAAAGTTCTTCTCTTTCTCATCTTGGGTTTAATAAGGAAATAATGCTTGGTCCTTATGGTATTAGAGATGCTGGAGATAGACGTGCACTCACAGGAAGTGTATCCCCGGATGCAGATATTCCTTTTCTTCGAAGTTACAATAATGATAGACTCCATGAGAACTTCCGCAATAGTTTGCAGGAATGCTGCATCTGTTTTACTGAGTATGCAGGCGCTGAGTTTGTCAGGCTGCCTTGCAAGCATTTCTTCTGTTGGAAATGCATGAAGACTTATTCTGACATGCATGTCAAGGAAGGTACCATCACCAAATTGAACTGTCCTGATGCAAAATGTCAGGGTATGATCCCGCCAGGTTTGCTAAAACGATTGCTTGGCGATGAAGAGTTTGAACGTTGGGAGTCCTTGATGTTAGAAAAAACACTCCAGTCAATGTCTGATATTGTGTCTTGTCCAAGATGTAAAACACCCTGCATAGAAGATGAAGATGATCATGCCCAATGCTCAAAGTGCTTCTTTAGCTTCTGTACACTTTGCTTGGAGCGGCGCCATGTGGGTGTTCAATGTATGACACCAGAAATGAAGCTCCGTATCCTCCAGGAACGTCAAAACTTCAGTCAGTTAGGCGATGAGCAAAAGCGGAGAGAAAAAGAAATGATCAATGAGATCCTCAGTGTGAGAGAAATACTTAGCGATGCAAAGCAATGCCCGGCTTGCAACATGGCAATATCCCGAGTTGAAGGTTGCAACAAGATGGTGTGTGAAAATTGTGGGCAGTACTTCTGCTACAACTGTGGAAGCGGAATAACTGGATATGATCATTTCAGGGATGGGCAATGTGAACTGTTCCCCCAAGAAACAATTCAGAACTGGCAGGCACAGATGAATCTTCGCCAGAATTTGGGTCAGATACATGCTCAACAGGTCGCTGAACTGGTTGCCCAGCAGGTAGCTGTACACGGACAATTATGTCCCAGTTGTGGTCAGTTTAATGCAAAGTTTAACAATAACAATCATATATCTTGCTGGGCATGCCAACACCACTTTTGCTACTTATGCAAAGAGACCGTGAGGCGAAGCTCTCAGCATTATGGACCGAAGGGTTGCAAACAACACACACCAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

703

Amino Acids

79.2

Weight (kDa)

5.73

Isoelectric Point (pI)

60.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RWD PF05773 197 - 331 7.1e-23 RWD domain
zf-RING_2 PF13639 389 - 426 6e-06 Ring finger domain
IBR PF01485 459 - 517 2.6e-09 IBR domain, a half RING-finger domain
IBR PF01485 558 - 595 2.5e-06 IBR domain, a half RING-finger domain
IBR_1 PF22191 561 - 594 1.9e-06 IBR domain
Rcat_RNF216 PF26200 562 - 605 2.1e-08 RNF216 Rcat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1271, 1953
Acc36I ACCTGC 1 cut(s) 1921
Acc65I GGTACC 1 cut(s) 1283
AccB1I GGYRCC 3 cut(s) 245, 1283, 1530
AccB7I CCANNNNNTGG 2 cut(s) 976, 1885
AccBSI CCGCTC 1 cut(s) 1528
AccII CGCG 2 cut(s) 63, 540
AciI CCGC 8 cut(s) 26, 63, 540, 1153, 1334, 1528, 1624, 1785
AclI AACGTT 2 cut(s) 639, 1378
AclWI GGATC 3 cut(s) 587, 1324, 1645
AcoI YGGCCR 1 cut(s) 310
AcsI RAATTY 3 cut(s) 733, 903, 1882
AcuI CTGAAG 2 cut(s) 131, 1582
AcyI GRCGYC 1 cut(s) 1531
AfaI GTAC 5 cut(s) 90, 1285, 1513, 1763, 1941
AfiI CCNNNNNNNGG 3 cut(s) 976, 1885, 1964
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 1 cut(s) 824
AhdI GACNNNNNGTC 1 cut(s) 751
AjiI CACGTC 1 cut(s) 1070
AjnI CCWGG 5 cut(s) 233, 703, 1336, 1581, 2104
AjuI GAANNNNNNNTTGG 6 cut(s) 269, 301, 1017, 1049, 1830, 1862
AluBI AGCT 8 cut(s) 532, 574, 593, 701, 1506, 1570, 1937, 2064
AluI AGCT 8 cut(s) 532, 574, 593, 701, 1506, 1570, 1937, 2064
Alw21I GWGCWC 1 cut(s) 1075
Alw26I GTCTC 4 cut(s) 39, 381, 627, 2042
Alw44I GTGCAC 1 cut(s) 1071
AlwI GGATC 3 cut(s) 587, 1324, 1645
AlwNI CAGNNNCTG 1 cut(s) 1202
Ama87I CYCGRG 1 cut(s) 1716
AoxI GGCC 2 cut(s) 310, 664
ApaLI GTGCAC 1 cut(s) 1071
ApeKI GCWGC 7 cut(s) 406, 470, 532, 535, 571, 1173, 1216
ApoI RAATTY 3 cut(s) 733, 903, 1882
ArsI GACNNNNNNTTYG 2 cut(s) 1585, 1617
Asp700I GAANNNNTTC 1 cut(s) 1845
Asp718I GGTACC 1 cut(s) 1283
AspLEI GCGC 3 cut(s) 540, 1202, 1533
AspS9I GGNCC 3 cut(s) 943, 1037, 2078
AsuC2I CCSGG 2 cut(s) 1094, 1694
AsuHPI GGTGA 5 cut(s) 52, 144, 401, 719, 1282
AsuII TTCGAA 3 cut(s) 305, 332, 1117
AvaI CYCGRG 1 cut(s) 1716
AvaII GGWCC 3 cut(s) 943, 1037, 2078
BaeGI GKGCMC 2 cut(s) 250, 1075
BalI TGGCCA 1 cut(s) 312
BanI GGYRCC 3 cut(s) 245, 1283, 1530
BbsI GAAGAC 1 cut(s) 1259
Bbv12I GWGCWC 1 cut(s) 1075
BbvCI CCTCAGC 2 cut(s) 474, 575
BbvI GCAGC 7 cut(s) 418, 457, 519, 547, 583, 1160, 1203
BccI CCATC 4 cut(s) 934, 1295, 1732, 1808
BciT130I CCWGG 5 cut(s) 235, 705, 1338, 1583, 2106
BciVI GTATCC 2 cut(s) 1099, 1586
BclI TGATCA 4 cut(s) 586, 1474, 1641, 1801
BcnI CCSGG 2 cut(s) 1094, 1694
BcoDI GTCTC 4 cut(s) 39, 381, 627, 2042
BfaI CTAG 2 cut(s) 456, 741
BfmI CTRYAG 1 cut(s) 533
BfoI RGCGCY 2 cut(s) 1203, 1534
BfrI CTTAAG 1 cut(s) 749
BfuAI ACCTGC 1 cut(s) 1921
BfuI GTATCC 2 cut(s) 1099, 1586
BisI GCNGC 8 cut(s) 407, 471, 533, 536, 572, 1174, 1217, 1529
BlsI GCNGC 8 cut(s) 408, 472, 534, 537, 573, 1175, 1218, 1530
BmcAI AGTACT 1 cut(s) 1763
Bme1390I CCNGG 7 cut(s) 235, 705, 1094, 1338, 1583, 1694, 2106
Bme18I GGWCC 3 cut(s) 943, 1037, 2078
BmeRI GACNNNNNGTC 1 cut(s) 751
BmeT110I CYCGRG 1 cut(s) 1716
BmgBI CACGTC 1 cut(s) 1070
BmgT120I GGNCC 3 cut(s) 943, 1037, 2078
BmiI GGNNCC 3 cut(s) 247, 1285, 1532
BmrFI CCNGG 7 cut(s) 235, 705, 1094, 1338, 1583, 1694, 2106
BmrI ACTGGG 2 cut(s) 326, 1953
BmsI GCATC 9 cut(s) 115, 239, 499, 811, 1045, 1087, 1185, 1300, 1669
BmuI ACTGGG 2 cut(s) 326, 1953
BpiI GAAGAC 1 cut(s) 1259
BpmI CTGGAG 3 cut(s) 1080, 1394, 1565
Bpu10I CCTNAGC 3 cut(s) 474, 575, 594
Bpu14I TTCGAA 3 cut(s) 305, 332, 1117
BpuMI CCSGG 2 cut(s) 1094, 1694
BsaHI GRCGYC 1 cut(s) 1531
BsaI GGTCTC 2 cut(s) 381, 2042
BsaJI CCNNGG 3 cut(s) 221, 263, 1092
BsaWI WCCGGW 1 cut(s) 37
BsaXI ACNNNNNCTCC 6 cut(s) 72, 102, 590, 620, 624, 654
Bsc4I CCNNNNNNNGG 3 cut(s) 976, 1885, 1964
Bse1I ACTGG 6 cut(s) 321, 1411, 1798, 1859, 1923, 1959
Bse3DI GCAATG 2 cut(s) 1694, 1826
BseBI CCWGG 5 cut(s) 235, 705, 1338, 1583, 2106
BseDI CCNNGG 3 cut(s) 221, 263, 1092
BseGI GGATG 7 cut(s) 230, 508, 607, 645, 945, 1102, 1819
BseLI CCNNNNNNNGG 3 cut(s) 976, 1885, 1964
BseMI GCAATG 2 cut(s) 1694, 1826
BseNI ACTGG 6 cut(s) 321, 1411, 1798, 1859, 1923, 1959
BseRI GAGGAG 5 cut(s) 87, 90, 93, 96, 99
BseSI GKGCMC 2 cut(s) 250, 1075
BseXI GCAGC 7 cut(s) 418, 457, 519, 547, 583, 1160, 1203
BseYI CCCAGC 2 cut(s) 1926, 2010
Bsh1236I CGCG 2 cut(s) 63, 540
BshFI GGCC 2 cut(s) 312, 666
BshNI GGYRCC 3 cut(s) 245, 1283, 1530
BsiHKAI GWGCWC 1 cut(s) 1075
BsiHKCI CYCGRG 1 cut(s) 1716
BsiSI CCGG 4 cut(s) 38, 554, 1094, 1694
BslFI GGGAC 1 cut(s) 1941
BslI CCNNNNNNNGG 3 cut(s) 976, 1885, 1964
BsmAI GTCTC 4 cut(s) 39, 381, 627, 2042
BsmFI GGGAC 1 cut(s) 1941
BsmI GAATGC 2 cut(s) 472, 1175
BsnI GGCC 2 cut(s) 312, 666
Bso31I GGTCTC 2 cut(s) 381, 2042
BsoBI CYCGRG 1 cut(s) 1716
Bsp119I TTCGAA 3 cut(s) 305, 332, 1117
Bsp1286I GDGCHC 2 cut(s) 250, 1075
Bsp1407I TGTACA 2 cut(s) 1511, 1939
Bsp143I GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
BspACI CCGC 8 cut(s) 26, 63, 540, 1153, 1334, 1528, 1624, 1785
BspANI GGCC 2 cut(s) 312, 666
BspFNI CGCG 2 cut(s) 63, 540
BspHI TCATGA 1 cut(s) 178
BspLI GGNNCC 3 cut(s) 247, 1285, 1532
BspMAI CTGCAG 1 cut(s) 537
BspMI ACCTGC 1 cut(s) 1921
BspPI GGATC 3 cut(s) 587, 1324, 1645
BspQI GCTCTTC 3 cut(s) 522, 543, 561
BspT104I TTCGAA 3 cut(s) 305, 332, 1117
BspT107I GGYRCC 3 cut(s) 245, 1283, 1530
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 2 cut(s) 381, 2042
BsrBI CCGCTC 1 cut(s) 1528
BsrDI GCAATG 2 cut(s) 1694, 1826
BsrGI TGTACA 2 cut(s) 1511, 1939
BsrI ACTGG 6 cut(s) 321, 1411, 1798, 1859, 1923, 1959
BssECI CCNNGG 3 cut(s) 221, 263, 1092
BssMI GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
BssNI GRCGYC 1 cut(s) 1531
Bst2UI CCWGG 5 cut(s) 235, 705, 1338, 1583, 2106
Bst4CI ACNGT 5 cut(s) 796, 1304, 1778, 1830, 2053
Bst6I CTCTTC 6 cut(s) 49, 64, 522, 543, 561, 1362
BstACI GRCGYC 1 cut(s) 1531
BstAFI CTTAAG 1 cut(s) 749
BstAUI TGTACA 2 cut(s) 1511, 1939
BstBI TTCGAA 3 cut(s) 305, 332, 1117
BstC8I GCNNGC 7 cut(s) 411, 612, 1198, 1226, 1699, 1860, 2017
BstF5I GGATG 7 cut(s) 230, 508, 607, 645, 945, 1102, 1819
BstFNI CGCG 2 cut(s) 63, 540
BstH2I RGCGCY 2 cut(s) 1203, 1534
BstHHI GCGC 3 cut(s) 540, 1202, 1533
BstKTI GATC 8 cut(s) 145, 582, 589, 1332, 1477, 1644, 1653, 1804
BstMAI GTCTC 4 cut(s) 39, 381, 627, 2042
BstMBI GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
BstMWI GCNNNNNNNGC 7 cut(s) 1225, 1342, 1494, 1503, 1698, 2016, 2040
BstNI CCWGG 5 cut(s) 235, 705, 1338, 1583, 2106
BstNSI RCATGY 5 cut(s) 828, 1270, 1274, 1901, 2019
BstSCI CCNGG 7 cut(s) 233, 703, 1092, 1336, 1581, 1692, 2104
BstSFI CTRYAG 1 cut(s) 533
BstSLI GKGCMC 2 cut(s) 250, 1075
BstUI CGCG 2 cut(s) 63, 540
BstV1I GCAGC 7 cut(s) 418, 457, 519, 547, 583, 1160, 1203
BstV2I GAAGAC 1 cut(s) 1259
BstX2I RGATCY 1 cut(s) 1650
BstYI RGATCY 1 cut(s) 1650
BsuI GTATCC 2 cut(s) 1099, 1586
BsuRI GGCC 2 cut(s) 312, 666
BtgZI GCGATG 3 cut(s) 1377, 1626, 1692
BtrI CACGTC 1 cut(s) 1070
BtsCI GGATG 7 cut(s) 230, 508, 607, 645, 945, 1102, 1819
BtsIMutI CAGTG 1 cut(s) 1663
BveI ACCTGC 1 cut(s) 1921
Cac8I GCNNGC 7 cut(s) 411, 612, 1198, 1226, 1699, 1860, 2017
CaiI CAGNNNCTG 1 cut(s) 1202
CciI TCATGA 1 cut(s) 178
CfoI GCGC 3 cut(s) 540, 1202, 1533
Cfr13I GGNCC 3 cut(s) 943, 1037, 2078
CseI GACGC 1 cut(s) 69
Csp6I GTAC 5 cut(s) 89, 1284, 1512, 1762, 1940
CviQI GTAC 5 cut(s) 89, 1284, 1512, 1762, 1940
DinI GGCGCC 1 cut(s) 1532
DpnI GATC 8 cut(s) 144, 581, 588, 1331, 1476, 1643, 1652, 1803
DpnII GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
DrdI GACNNNNNNGTC 2 cut(s) 1271, 1953
DriI GACNNNNNGTC 1 cut(s) 751
DseDI GACNNNNNNGTC 2 cut(s) 1271, 1953
EaeI YGGCCR 1 cut(s) 310
Eam1104I CTCTTC 6 cut(s) 49, 64, 522, 543, 561, 1362
Eam1105I GACNNNNNGTC 1 cut(s) 751
EarI CTCTTC 6 cut(s) 49, 64, 522, 543, 561, 1362
Eco147I AGGCCT 1 cut(s) 666
Eco31I GGTCTC 2 cut(s) 381, 2042
Eco47I GGWCC 3 cut(s) 943, 1037, 2078
Eco57I CTGAAG 2 cut(s) 131, 1582
Eco88I CYCGRG 1 cut(s) 1716
EcoRI GAATTC 1 cut(s) 733
EcoRII CCWGG 5 cut(s) 233, 703, 1336, 1581, 2104
EcoT22I ATGCAT 3 cut(s) 130, 1250, 1272
EgeI GGCGCC 1 cut(s) 1532
EheI GGCGCC 1 cut(s) 1532
FalI AAGNNNNNCTT 4 cut(s) 1217, 1249, 1484, 1516
FaqI GGGAC 1 cut(s) 1941
FauI CCCGC 1 cut(s) 1341
FbaI TGATCA 4 cut(s) 586, 1474, 1641, 1801
Fnu4HI GCNGC 8 cut(s) 407, 471, 533, 536, 572, 1174, 1217, 1529
FokI GGATG 7 cut(s) 217, 515, 614, 632, 952, 1109, 1826
Fsp4HI GCNGC 8 cut(s) 407, 471, 533, 536, 572, 1174, 1217, 1529
FspBI CTAG 2 cut(s) 456, 741
GlaI GCGC 3 cut(s) 539, 1201, 1532
GluI GCNGC 8 cut(s) 407, 471, 533, 536, 572, 1174, 1217, 1529
GsaI CCCAGC 2 cut(s) 1930, 2014
GsuI CTGGAG 3 cut(s) 1080, 1394, 1565
HaeII RGCGCY 2 cut(s) 1203, 1534
HaeIII GGCC 2 cut(s) 312, 666
HapII CCGG 4 cut(s) 38, 554, 1094, 1694
HgaI GACGC 1 cut(s) 69
HhaI GCGC 3 cut(s) 540, 1202, 1533
Hin1I GRCGYC 1 cut(s) 1531
Hin6I GCGC 3 cut(s) 538, 1200, 1531
HinP1I GCGC 3 cut(s) 538, 1200, 1531
HincII GTYRAC 1 cut(s) 822
HindII GTYRAC 1 cut(s) 822
HpaII CCGG 4 cut(s) 38, 554, 1094, 1694
HphI GGTGA 5 cut(s) 52, 144, 401, 719, 1282
Hpy166II GTNNAC 6 cut(s) 756, 822, 1073, 1514, 1826, 1942
Hpy188III TCNNGA 5 cut(s) 179, 274, 596, 1307, 1716
Hpy8I GTNNAC 6 cut(s) 756, 822, 1073, 1514, 1826, 1942
Hpy99I CGWCG 2 cut(s) 11, 125
HpyAV CCTTC 7 cut(s) 117, 386, 677, 799, 1274, 1718, 2077
HpyCH4III ACNGT 5 cut(s) 796, 1304, 1778, 1830, 2053
HpyCH4IV ACGT 4 cut(s) 639, 1069, 1378, 1588
HpyF10VI GCNNNNNNNGC 7 cut(s) 1225, 1342, 1494, 1503, 1698, 2016, 2040
HpySE526I ACGT 4 cut(s) 639, 1069, 1378, 1588
Hsp92I GRCGYC 1 cut(s) 1531
HspAI GCGC 3 cut(s) 538, 1200, 1531
KasI GGCGCC 1 cut(s) 1530
KpnI GGTACC 1 cut(s) 1287
Ksp22I TGATCA 4 cut(s) 586, 1474, 1641, 1801
Kzo9I GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
LguI GCTCTTC 3 cut(s) 522, 543, 561
LmnI GCTCC 3 cut(s) 706, 1525, 1575
Lsp1109I GCAGC 7 cut(s) 418, 457, 519, 547, 583, 1160, 1203
LweI GCATC 9 cut(s) 115, 239, 499, 811, 1045, 1087, 1185, 1300, 1669
MaeI CTAG 2 cut(s) 456, 741
MaeII ACGT 4 cut(s) 639, 1069, 1378, 1588
MaeIII GTNAC 5 cut(s) 150, 514, 743, 831, 1121
MalI GATC 8 cut(s) 144, 581, 588, 1331, 1476, 1643, 1652, 1803
MbiI CCGCTC 1 cut(s) 1528
MboI GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
MflI RGATCY 1 cut(s) 1650
MhlI GDGCHC 2 cut(s) 250, 1075
MlsI TGGCCA 1 cut(s) 312
MluNI TGGCCA 1 cut(s) 312
Mly113I GGCGCC 1 cut(s) 1531
MlyI GAGTC 6 cut(s) 41, 169, 629, 923, 1131, 1394
MmeI TCCRAC 2 cut(s) 870, 1220
Mox20I TGGCCA 1 cut(s) 312
Mph1103I ATGCAT 3 cut(s) 130, 1250, 1272
MroXI GAANNNNTTC 1 cut(s) 1845
MscI TGGCCA 1 cut(s) 312
MseI TTAA 6 cut(s) 131, 750, 900, 1017, 1974, 1986
MslI CAYNNNNRTG 1 cut(s) 1539
Msp20I TGGCCA 1 cut(s) 312
MspA1I CMGCKG 1 cut(s) 574
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 4 cut(s) 38, 554, 1094, 1694
MspR9I CCNGG 7 cut(s) 235, 705, 1094, 1338, 1583, 1694, 2106
Mva1269I GAATGC 2 cut(s) 472, 1175
MvaI CCWGG 5 cut(s) 235, 705, 1338, 1583, 2106
MvnI CGCG 2 cut(s) 63, 540
MwoI GCNNNNNNNGC 7 cut(s) 1225, 1342, 1494, 1503, 1698, 2016, 2040
NarI GGCGCC 1 cut(s) 1531
NciI CCSGG 2 cut(s) 1094, 1694
NdeII GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
NlaIV GGNNCC 3 cut(s) 247, 1285, 1532
NmuCI GTSAC 3 cut(s) 150, 514, 743
NsiI ATGCAT 3 cut(s) 130, 1250, 1272
NspI RCATGY 5 cut(s) 828, 1270, 1274, 1901, 2019
NspV TTCGAA 3 cut(s) 305, 332, 1117
PaeI GCATGC 1 cut(s) 2019
PagI TCATGA 1 cut(s) 178
PceI AGGCCT 1 cut(s) 666
PciI ACATGT 1 cut(s) 824
PciSI GCTCTTC 3 cut(s) 522, 543, 561
PcsI WCGNNNNNNNCGW 2 cut(s) 636, 667
PctI GAATGC 2 cut(s) 472, 1175
PdmI GAANNNNTTC 1 cut(s) 1845
PfeI GAWTC 4 cut(s) 238, 682, 893, 1870
PflMI CCANNNNNTGG 2 cut(s) 976, 1885
PfoI TCCNGGA 2 cut(s) 233, 1581
PkrI GCNGC 8 cut(s) 408, 472, 534, 537, 573, 1175, 1218, 1530
PleI GAGTC 6 cut(s) 40, 169, 628, 923, 1131, 1393
PluTI GGCGCC 1 cut(s) 1534
PpsI GAGTC 6 cut(s) 40, 169, 628, 923, 1131, 1393
PscI ACATGT 1 cut(s) 824
Psp1406I AACGTT 2 cut(s) 639, 1378
Psp6I CCWGG 5 cut(s) 233, 703, 1336, 1581, 2104
PspFI CCCAGC 2 cut(s) 1926, 2010
PspGI CCWGG 5 cut(s) 233, 703, 1336, 1581, 2104
PspN4I GGNNCC 3 cut(s) 247, 1285, 1532
PspPI GGNCC 3 cut(s) 943, 1037, 2078
PstI CTGCAG 1 cut(s) 537
PstNI CAGNNNCTG 1 cut(s) 1202
PsuI RGATCY 1 cut(s) 1650
PvuII CAGCTG 1 cut(s) 574
RsaI GTAC 5 cut(s) 90, 1285, 1513, 1763, 1941
RsaNI GTAC 5 cut(s) 89, 1284, 1512, 1762, 1940
RseI CAYNNNNRTG 1 cut(s) 1539
SapI GCTCTTC 3 cut(s) 522, 543, 561
SaqAI TTAA 6 cut(s) 131, 750, 900, 1017, 1974, 1986
SatI GCNGC 8 cut(s) 407, 471, 533, 536, 572, 1174, 1217, 1529
Sau3AI GATC 8 cut(s) 142, 579, 586, 1329, 1474, 1641, 1650, 1801
Sau96I GGNCC 3 cut(s) 943, 1037, 2078
ScaI AGTACT 1 cut(s) 1763
SchI GAGTC 6 cut(s) 41, 169, 629, 923, 1131, 1394
ScrFI CCNGG 7 cut(s) 235, 705, 1094, 1338, 1583, 1694, 2106
SduI GDGCHC 2 cut(s) 250, 1075
SfaNI GCATC 9 cut(s) 115, 239, 499, 811, 1045, 1087, 1185, 1300, 1669
SfcI CTRYAG 1 cut(s) 533
SfoI GGCGCC 1 cut(s) 1532
SfuI TTCGAA 3 cut(s) 305, 332, 1117
SinI GGWCC 3 cut(s) 943, 1037, 2078
SmiMI CAYNNNNRTG 1 cut(s) 1539
SmlI CTYRAG 1 cut(s) 749
SmoI CTYRAG 1 cut(s) 749
SphI GCATGC 1 cut(s) 2019
SseBI AGGCCT 1 cut(s) 666
SsiI CCGC 8 cut(s) 26, 63, 540, 1153, 1334, 1528, 1624, 1785
SspDI GGCGCC 1 cut(s) 1530
SspMI CTAG 2 cut(s) 456, 741
StuI AGGCCT 1 cut(s) 666
StyD4I CCNGG 7 cut(s) 233, 703, 1092, 1336, 1581, 1692, 2104
TaaI ACNGT 5 cut(s) 796, 1304, 1778, 1830, 2053
TaiI ACGT 4 cut(s) 642, 1072, 1381, 1591
TaqI TCGA 7 cut(s) 120, 241, 305, 332, 546, 670, 1117
TaqII GACCGA 1 cut(s) 2095
TatI WGTACW 3 cut(s) 1511, 1761, 1939
TauI GCSGC 1 cut(s) 1531
TfiI GAWTC 4 cut(s) 238, 682, 893, 1870
Tru1I TTAA 6 cut(s) 131, 750, 900, 1017, 1974, 1986
Tru9I TTAA 6 cut(s) 131, 750, 900, 1017, 1974, 1986
TscAI CASTG 1 cut(s) 1663
TseFI GTSAC 3 cut(s) 150, 514, 743
TseI GCWGC 7 cut(s) 406, 470, 532, 535, 571, 1173, 1216
Tsp45I GTSAC 3 cut(s) 150, 514, 743
TspGWI ACGGA 3 cut(s) 24, 1562, 1959
TspRI CASTG 1 cut(s) 1663
Van91I CCANNNNNTGG 2 cut(s) 976, 1885
Vha464I CTTAAG 1 cut(s) 749
VneI GTGCAC 1 cut(s) 1071
VpaK11BI GGWCC 3 cut(s) 943, 1037, 2078
XapI RAATTY 3 cut(s) 733, 903, 1882
XceI RCATGY 5 cut(s) 828, 1270, 1274, 1901, 2019
XmnI GAANNNNTTC 1 cut(s) 1845
XspI CTAG 2 cut(s) 456, 741
ZrmI AGTACT 1 cut(s) 1763
Zsp2I ATGCAT 3 cut(s) 130, 1250, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.