Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0010496

Physical Location & Seq

Genomic Coordinates Reverse (-)

23741227 .. 23743614

Gene Structure 2388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g32870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGCTTTGTACGAGGAAATTCACTCCTGGGAGAACTTCAGTTTGCCCTTGTGTTTTACATGTTGTACAAGCATCGTATGCTAGTTTAAGTTCAGCTAGGTCGTTTGAATCCCAGGTTCGAGCTTGTTCAAATTTTGGGTATGTTTCTGGGTCTGTTGGTTCTCATTGTTTAGCCAAGTCTATTGTGCAAGATTGTATTTTGAGATTACCGAAAAAATCGACATTTGGATTTGGTTTGTTTTCGACTATGGCTGGAACAATCTTGGTCCAGGCTCGAGACCCGGCTAAGTTAAATGTGGAGATACAAAATGCAGTTGATGAGAATAGACTAAATGATGCGTGGAAGTTTTATGAGCAGTATATGGAGATGGATGGGTTTCCTAGGAAGTCTGTTGTTAATAAGCTTTTAGCTGGTTTTGTAGAAAGCTGTGATGTTGAGTGGCTTGAGAAGGCTTATGGGTTGGTGGAGCAGGCTATTGGGGAAAGCAAACAGAACTTGTTGGAGAGAAATATGCTGGTTTTTGTTTCATTTGGTCTCGCGAGAGCTGGGTTGCCAGTTCCTGCGTCGACTGTTTTGAGAAGAATGGTGGAGATGGAGGAATACCCTCCTGTTGCTGCTTGGTCTGCTGTCTTGGCCTACATGTCTCAAACAGCTCAAGGGGCTTATGTTGCTGCTGAGTTGATTCTTGAGATAGGTTACTTGTTCCAAGATCACAGGGTCGACCCACGTAAGAAGTGTAATGCGCCTTTGATTGCTATGAAGCCTAATACAACTGCTTTCAACATTGCTTTGGCTGGTTGTCTCTTGTTTGGAACAACTAAGAAAGCAGAGCAGCTTCTTGACATGATGCCTCGAGTCGGTATCAAAATGGACGCTAACTTATTGGTATTAATGGCACAAATATACGAGAGAAATGGACGGAGAGATGAGCTTAGAAAACTTCAAAGATATGTGGATGAAGCCCATAACCTAACTGATGTCCAGTTTCGCCAGTTCTACAATTGCTTGCTGGCATGCCATTTGAAATTCGGGGATTTAGACTCTGCGTCTAACATGATTTTGGAAATGCTGCGGAAAGCAAAAAAAGCAAGAGGTTCTCTTGCAGTTGCAACACTGGTATTTGATGCTGCTGGAAGGGGAAACAAGTTCCGTCGTGGAGCGATTTCTGAATCATGGCATCATTCAAGCCATAGAGAATCATATGCTTATGGAGACAATAGGTTACCTGGTATTCTTGTATTATCTTATGAAGAGTTTTCTATAGATAGAAATTTCTTGAGACTTGAGGCTGAGGCTAAGGAAGTGCTGGGTGCATTGTTAGCTAAATTGCAGAGCCAAGTTGAATTAGTAACAACTGACCGTGGTATCCTCCAGCCAACTGAAAAAATATTTGCTAAATTAGTAAAGGCCTTTCTGGAAGCAGACAAGACCAAGGATTTGGCGGCCTTCCTTATAAAGGCAGATAGAGAAGATTCCCCAGCTTCCAATGATGATTCAGCCTTGGTAAATGTCATTAATTCATGCATATCGCTTGGATGGTTAGACAAGGCACATGATCTTCTTGATGAAATGTGCTTGGCTGGTGTAAAAACTGGTTCTTCCGTATACGCTGCTCTTTTAAAAGCATATTGTGAAGCAAACCAAGCAGGAAATGCAGCATCACTATTAAGAGATGCTCGTAAGGCTGGGATCCAGCTAGACGCAAGCAGTTATGAGGCGCTGATCCGATCTAAGGTGCTTCAAAATGATACACAGGGAGCTCTTCATTTGTACACTGAGATGAAAGAGGCCAAGATTCCAAAAGCTGGTCATCAGGAGTTTGAGAGGTTGGTGAAAGAATGTGCAGAGGGTTGTGAACCGAGGTTGATGGTAAAGCTGTTGGAGGAAGTGAAGGAAGGGCAGGCGACATTGGATTCTGCTGTTCATGACTGGAACAACGTAATCCACTTTTTCTGCAGGAAGAGATTGATGCAAGATGCTGAGAAGGCACTGAAGAAGATGAGAAGTCTGGGGCATGCCCCAAATGCTCAAACTTTCCATTCTATGGTCACTGGGTATGCTGCTGTAGGAGGAAAATATATAGAGGTAACAGAGCTGTGGGGAGAGATGAAGTCTCTAGCATATAACACCTCAATGAAATTTGACCAGGAACTCCTGGATTCTGTTCTTTACACTTTCGTGAGGGGTGGGTTTTTCAGTAGAGCAAATGAAGTTTTGGAAATGATGGAGAAAGCGAAGATGTTCATTGACAAGTACAAGTACAGAACACTCTTCTTGAAGTACCATAAAACATTACACAAAGGCAAAGCTCCCAAATTCCAGACAGAATCCCAACTTAAAAAGAGAGAAGCAGCATTAGCATTTAAGAACTGGATAGGAGTGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

796

Amino Acids

89.01

Weight (kDa)

8.75

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_At1g68980	PF25245	92 - 220	1.6e-08	At1g68980, TPR repeats
PPR_2	PF13041	644 - 687	1e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03100
fragaria_vesca	FvH4_5g32870
malus_domestica	MD11G1281500.v1.1
prunus_persica	Prupe.8G237400_v2.0.a1
pyrus_communis	pycom11g24960
rosa_chinensis	RchiOBHm_Chr7g0230741 RchiOBHm_Chr7g0230851
rosa_laevigata	RLG00000001478
rosa_multiflora	Rmu_sc0007883.1_g000006 Rmu_sc0010407.1_g000003
rosa_roxburghii	Rroxscaffold_3G00229770
rosa_rugosa	Rorug07G0262500
rosa_samantha	Rh7AG414200 Rh7AG414900 Rh7BG391400 Rh7CG433100 Rh7CG433600 Rh7DG409800
rosa_wichuraiana	Rw7G034240 Rw7G034270 Rw7G034390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AccB7I	CCANNNNNTGG	2 cut(s)	1805, 2044
AccI	GTMKAC	3 cut(s)	566, 720, 1605
AccII	CGCG	1 cut(s)	539
AciI	CCGC	2 cut(s)	1072, 1442
AclWI	GGATC	3 cut(s)	1684, 1697, 1717
AcsI	RAATTY	6 cut(s)	17, 130, 1025, 1270, 2138, 2315
AcuI	CTGAAG	2 cut(s)	21, 2012
AfaI	GTAC	6 cut(s)	10, 66, 1772, 2255, 2261, 2282
AfiI	CCNNNNNNNGG	5 cut(s)	857, 1456, 1732, 1805, 2044
AflIII	ACRYGT	2 cut(s)	58, 639
AgsI	TTSAA	9 cut(s)	107, 129, 781, 944, 1024, 1185, 1343, 1742, 2278
AhdI	GACNNNNNGTC	1 cut(s)	1045
AjnI	CCWGG	6 cut(s)	25, 111, 267, 1225, 2145, 2154
AleI	CACNNNNGTG	1 cut(s)	2177
Alw21I	GWGCWC	1 cut(s)	1762
Alw26I	GTCTC	7 cut(s)	270, 539, 648, 806, 1206, 1273, 2118
AlwI	GGATC	3 cut(s)	1684, 1697, 1717
AlwNI	CAGNNNCTG	1 cut(s)	560
Ama87I	CYCGRG	2 cut(s)	273, 852
AoxI	GGCC	4 cut(s)	633, 1407, 1443, 1788
ApeKI	GCWGC	9 cut(s)	614, 671, 832, 1069, 1127, 1610, 1655, 2060, 2351
ApoI	RAATTY	6 cut(s)	17, 130, 1025, 1270, 2138, 2315
ArsI	GACNNNNNNTTYG	2 cut(s)	1420, 1452
AseI	ATTAAT	2 cut(s)	890, 1515
Asp700I	GAANNNNTTC	1 cut(s)	2240
AspA2I	CCTAGG	1 cut(s)	380
AspLEI	GCGC	2 cut(s)	745, 1720
AspS9I	GGNCC	1 cut(s)	265
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	1 cut(s)	1843
AvaI	CYCGRG	2 cut(s)	273, 852
AvaII	GGWCC	1 cut(s)	265
AvrII	CCTAGG	1 cut(s)	380
BaeI	ACNNNNGTAYC	2 cut(s)	1348, 1381
BamHI	GGATCC	1 cut(s)	1689
BanII	GRGCYC	1 cut(s)	1762
Bbv12I	GWGCWC	1 cut(s)	1762
BbvCI	CCTCAGC	1 cut(s)	1290
BbvI	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1597, 1667, 2047, 2363
BccI	CCATC	6 cut(s)	361, 365, 586, 1530, 1861, 2218
BciT130I	CCWGG	6 cut(s)	27, 113, 269, 1227, 2147, 2156
BciVI	GTATCC	1 cut(s)	1376
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	7 cut(s)	270, 539, 648, 806, 1206, 1273, 2118
BfaI	CTAG	5 cut(s)	81, 96, 381, 1697, 2117
BfmI	CTRYAG	3 cut(s)	1260, 1954, 2064
BfoI	RGCGCY	1 cut(s)	1721
BfuI	GTATCC	1 cut(s)	1376
BlnI	CCTAGG	1 cut(s)	380
Bme1390I	CCNGG	7 cut(s)	27, 113, 269, 281, 1227, 2147, 2156
Bme18I	GGWCC	1 cut(s)	265
BmeRI	GACNNNNNGTC	1 cut(s)	1045
BmeT110I	CYCGRG	2 cut(s)	273, 852
BmgT120I	GGNCC	1 cut(s)	265
BmiI	GGNNCC	1 cut(s)	1691
BmrFI	CCNGG	7 cut(s)	27, 113, 269, 281, 1227, 2147, 2156
BmrI	ACTGGG	1 cut(s)	2061
BmsI	GCATC	9 cut(s)	80, 325, 837, 1114, 1186, 1663, 1667, 1959, 1966
BmuI	ACTGGG	1 cut(s)	2061
BpmI	CTGGAG	1 cut(s)	1355
Bpu10I	CCTNAGC	2 cut(s)	1290, 1296
BpuEI	CTTGAG	5 cut(s)	464, 639, 707, 1297, 1304
BpuMI	CCSGG	1 cut(s)	281
BsaAI	YACGTR	1 cut(s)	728
BsaI	GGTCTC	2 cut(s)	270, 539
BsaJI	CCNNGG	7 cut(s)	26, 111, 380, 1360, 1431, 1500, 1859
Bsc4I	CCNNNNNNNGG	5 cut(s)	857, 1456, 1732, 1805, 2044
Bse1I	ACTGG	8 cut(s)	554, 982, 991, 1119, 1597, 1934, 2056, 2375
Bse3DI	GCAATG	1 cut(s)	783
BseBI	CCWGG	6 cut(s)	27, 113, 269, 1227, 2147, 2156
BseDI	CCNNGG	7 cut(s)	26, 111, 380, 1360, 1431, 1500, 1859
BseGI	GGATG	3 cut(s)	376, 961, 1541
BseLI	CCNNNNNNNGG	5 cut(s)	857, 1456, 1732, 1805, 2044
BseMI	GCAATG	1 cut(s)	783
BseMII	CTCAG	4 cut(s)	666, 1281, 1767, 1971
BseNI	ACTGG	8 cut(s)	554, 982, 991, 1119, 1597, 1934, 2056, 2375
BseXI	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1597, 1667, 2047, 2363
BseYI	CCCAGC	4 cut(s)	545, 1306, 1477, 1685
BsgI	GTGCAG	1 cut(s)	1863
Bsh1236I	CGCG	1 cut(s)	539
BshFI	GGCC	4 cut(s)	635, 1409, 1445, 1790
BsiHKAI	GWGCWC	1 cut(s)	1762
BsiHKCI	CYCGRG	2 cut(s)	273, 852
BsiSI	CCGG	1 cut(s)	281
BslI	CCNNNNNNNGG	5 cut(s)	857, 1456, 1732, 1805, 2044
BsmAI	GTCTC	7 cut(s)	270, 539, 648, 806, 1206, 1273, 2118
BsnI	GGCC	4 cut(s)	635, 1409, 1445, 1790
Bso31I	GGTCTC	2 cut(s)	270, 539
BsoBI	CYCGRG	2 cut(s)	273, 852
Bsp1286I	GDGCHC	1 cut(s)	1762
Bsp1407I	TGTACA	2 cut(s)	64, 1770
Bsp143I	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
Bsp68I	TCGCGA	1 cut(s)	539
BspACI	CCGC	2 cut(s)	1072, 1442
BspANI	GGCC	4 cut(s)	635, 1409, 1445, 1790
BspCNI	CTCAG	4 cut(s)	667, 1282, 1768, 1972
BspFNI	CGCG	1 cut(s)	539
BspHI	TCATGA	1 cut(s)	1924
BspLI	GGNNCC	1 cut(s)	1691
BspMAI	CTGCAG	1 cut(s)	1958
BspPI	GGATC	3 cut(s)	1684, 1697, 1717
BspQI	GCTCTTC	1 cut(s)	1767
BspTNI	GGTCTC	2 cut(s)	270, 539
BsrDI	GCAATG	1 cut(s)	783
BsrGI	TGTACA	2 cut(s)	64, 1770
BsrI	ACTGG	8 cut(s)	554, 982, 991, 1119, 1597, 1934, 2056, 2375
BssECI	CCNNGG	7 cut(s)	26, 111, 380, 1360, 1431, 1500, 1859
BssMI	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
BssNAI	GTATAC	1 cut(s)	1606
BssT1I	CCWWGG	3 cut(s)	380, 1431, 1500
Bst1107I	GTATAC	1 cut(s)	1606
Bst2UI	CCWGG	6 cut(s)	27, 113, 269, 1227, 2147, 2156
Bst4CI	ACNGT	2 cut(s)	571, 1361
Bst6I	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
BstAPI	GCANNNNNTGC	2 cut(s)	77, 1652
BstAUI	TGTACA	2 cut(s)	64, 1770
BstBAI	YACGTR	1 cut(s)	728
BstC8I	GCNNGC	7 cut(s)	471, 1007, 1011, 1015, 1705, 1902, 2016
BstDEI	CTNAG	9 cut(s)	285, 675, 819, 932, 1290, 1296, 1731, 1776, 1980
BstDSI	CCRYGG	1 cut(s)	1360
BstEII	GGTNACC	1 cut(s)	1221
BstENI	CCTNNNNNAGG	1 cut(s)	1454
BstF5I	GGATG	3 cut(s)	376, 961, 1541
BstFNI	CGCG	1 cut(s)	539
BstH2I	RGCGCY	1 cut(s)	1721
BstHHI	GCGC	2 cut(s)	745, 1720
BstKTI	GATC	5 cut(s)	712, 1558, 1692, 1725, 1730
BstMAI	GTCTC	7 cut(s)	270, 539, 648, 806, 1206, 1273, 2118
BstMBI	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
BstNI	CCWGG	6 cut(s)	27, 113, 269, 1227, 2147, 2156
BstNSI	RCATGY	4 cut(s)	62, 643, 1017, 2018
BstPI	GGTNACC	1 cut(s)	1221
BstSCI	CCNGG	7 cut(s)	25, 111, 267, 279, 1225, 2145, 2154
BstSFI	CTRYAG	3 cut(s)	1260, 1954, 2064
BstUI	CGCG	1 cut(s)	539
BstV1I	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1597, 1667, 2047, 2363
BstX2I	RGATCY	1 cut(s)	1689
BstXI	CCANNNNNNTGG	1 cut(s)	1438
BstYI	RGATCY	1 cut(s)	1689
BstZ17I	GTATAC	1 cut(s)	1606
BsuI	GTATCC	1 cut(s)	1376
BsuRI	GGCC	4 cut(s)	635, 1409, 1445, 1790
BtgI	CCRYGG	1 cut(s)	1360
BtsCI	GGATG	3 cut(s)	376, 961, 1541
BtsIMutI	CAGTG	4 cut(s)	1112, 1773, 1988, 2049
BtuMI	TCGCGA	1 cut(s)	539
Cac8I	GCNNGC	7 cut(s)	471, 1007, 1011, 1015, 1705, 1902, 2016
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	1 cut(s)	1924
CfoI	GCGC	2 cut(s)	745, 1720
Cfr13I	GGNCC	1 cut(s)	265
CseI	GACGC	4 cut(s)	552, 881, 1035, 1709
CsiI	ACCWGGT	1 cut(s)	1225
Csp6I	GTAC	6 cut(s)	9, 65, 1771, 2254, 2260, 2281
CviQI	GTAC	6 cut(s)	9, 65, 1771, 2254, 2260, 2281
DdeI	CTNAG	9 cut(s)	285, 675, 819, 932, 1290, 1296, 1731, 1776, 1980
DpnI	GATC	5 cut(s)	711, 1557, 1691, 1724, 1729
DpnII	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
DraI	TTTAAA	1 cut(s)	1620
DriI	GACNNNNNGTC	1 cut(s)	1045
Eam1104I	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
Eam1105I	GACNNNNNGTC	1 cut(s)	1045
EarI	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
Ecl136II	GAGCTC	1 cut(s)	1760
Eco130I	CCWWGG	3 cut(s)	380, 1431, 1500
Eco147I	AGGCCT	1 cut(s)	1409
Eco24I	GRGCYC	1 cut(s)	1762
Eco31I	GGTCTC	2 cut(s)	270, 539
Eco47I	GGWCC	1 cut(s)	265
Eco53kI	GAGCTC	1 cut(s)	1760
Eco57I	CTGAAG	2 cut(s)	21, 2012
Eco88I	CYCGRG	2 cut(s)	273, 852
Eco91I	GGTNACC	1 cut(s)	1221
EcoICRI	GAGCTC	1 cut(s)	1760
EcoNI	CCTNNNNNAGG	1 cut(s)	1454
EcoO65I	GGTNACC	1 cut(s)	1221
EcoRII	CCWGG	6 cut(s)	25, 111, 267, 1225, 2145, 2154
EcoT14I	CCWWGG	3 cut(s)	380, 1431, 1500
EcoT22I	ATGCAT	1 cut(s)	1526
EcoT38I	GRGCYC	1 cut(s)	1762
ErhI	CCWWGG	3 cut(s)	380, 1431, 1500
FauNDI	CATATG	1 cut(s)	1201
FblI	GTMKAC	3 cut(s)	566, 720, 1605
FokI	GGATG	3 cut(s)	383, 968, 1548
FriOI	GRGCYC	1 cut(s)	1762
FspBI	CTAG	5 cut(s)	81, 96, 381, 1697, 2117
GlaI	GCGC	2 cut(s)	744, 1719
GsaI	CCCAGC	4 cut(s)	549, 1310, 1481, 1689
GsuI	CTGGAG	1 cut(s)	1355
HaeII	RGCGCY	1 cut(s)	1721
HaeIII	GGCC	4 cut(s)	635, 1409, 1445, 1790
HapII	CCGG	1 cut(s)	281
HgaI	GACGC	4 cut(s)	552, 881, 1035, 1709
HhaI	GCGC	2 cut(s)	745, 1720
Hin6I	GCGC	2 cut(s)	743, 1718
HinP1I	GCGC	2 cut(s)	743, 1718
HincII	GTYRAC	2 cut(s)	567, 721
HindII	GTYRAC	2 cut(s)	567, 721
HindIII	AAGCTT	1 cut(s)	401
HpaII	CCGG	1 cut(s)	281
HphI	GGTGA	1 cut(s)	1843
Hpy166II	GTNNAC	5 cut(s)	567, 721, 1606, 1773, 1856
Hpy188I	TCNGA	2 cut(s)	1168, 1727
Hpy8I	GTNNAC	5 cut(s)	567, 721, 1606, 1773, 1856
Hpy99I	CGWCG	2 cut(s)	568, 1155
HpyAV	CCTTC	6 cut(s)	442, 1128, 1456, 1885, 1889, 1978
HpyCH4III	ACNGT	2 cut(s)	571, 1361
HpyCH4IV	ACGT	2 cut(s)	727, 1938
HpyF3I	CTNAG	9 cut(s)	285, 675, 819, 932, 1290, 1296, 1731, 1776, 1980
HpySE526I	ACGT	2 cut(s)	727, 1938
HspAI	GCGC	2 cut(s)	743, 1718
Kzo9I	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	4 cut(s)	466, 1157, 1757, 2314
Lsp1109I	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1597, 1667, 2047, 2363
LweI	GCATC	9 cut(s)	80, 325, 837, 1114, 1186, 1663, 1667, 1959, 1966
MabI	ACCWGGT	1 cut(s)	1225
MaeI	CTAG	5 cut(s)	81, 96, 381, 1697, 2117
MaeII	ACGT	2 cut(s)	727, 1938
MaeIII	GTNAC	5 cut(s)	695, 1221, 1348, 2047, 2086
MalI	GATC	5 cut(s)	711, 1557, 1691, 1724, 1729
MboI	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
MfeI	CAATTG	1 cut(s)	1000
MflI	RGATCY	1 cut(s)	1689
MhlI	GDGCHC	1 cut(s)	1762
MlyI	GAGTC	2 cut(s)	864, 1034
MmeI	TCCRAC	2 cut(s)	480, 1860
Mph1103I	ATGCAT	1 cut(s)	1526
MroXI	GAANNNNTTC	1 cut(s)	2240
MseI	TTAA	9 cut(s)	86, 290, 396, 890, 1515, 1619, 1667, 2337, 2364
MslI	CAYNNNNRTG	3 cut(s)	1778, 2132, 2177
MspI	CCGG	1 cut(s)	281
MspR9I	CCNGG	7 cut(s)	27, 113, 269, 281, 1227, 2147, 2156
MunI	CAATTG	1 cut(s)	1000
MvaI	CCWGG	6 cut(s)	27, 113, 269, 1227, 2147, 2156
MvnI	CGCG	1 cut(s)	539
NciI	CCSGG	1 cut(s)	281
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
NlaIV	GGNNCC	1 cut(s)	1691
NmuCI	GTSAC	1 cut(s)	2047
NruI	TCGCGA	1 cut(s)	539
NsiI	ATGCAT	1 cut(s)	1526
NspI	RCATGY	4 cut(s)	62, 643, 1017, 2018
OliI	CACNNNNGTG	1 cut(s)	2177
PaeI	GCATGC	2 cut(s)	1017, 2018
PaeR7I	CTCGAG	2 cut(s)	273, 852
PagI	TCATGA	1 cut(s)	1924
PceI	AGGCCT	1 cut(s)	1409
PciI	ACATGT	2 cut(s)	58, 639
PciSI	GCTCTTC	1 cut(s)	1767
PdmI	GAANNNNTTC	1 cut(s)	2240
PflMI	CCANNNNNTGG	2 cut(s)	1805, 2044
PfoI	TCCNGGA	1 cut(s)	2154
PleI	GAGTC	2 cut(s)	863, 1034
PpsI	GAGTC	2 cut(s)	863, 1034
Ppu21I	YACGTR	1 cut(s)	728
PscI	ACATGT	2 cut(s)	58, 639
PshBI	ATTAAT	2 cut(s)	890, 1515
PsiI	TTATAA	1 cut(s)	1454
Psp124BI	GAGCTC	1 cut(s)	1762
Psp6I	CCWGG	6 cut(s)	25, 111, 267, 1225, 2145, 2154
PspEI	GGTNACC	1 cut(s)	1221
PspFI	CCCAGC	4 cut(s)	545, 1306, 1477, 1685
PspGI	CCWGG	6 cut(s)	25, 111, 267, 1225, 2145, 2154
PspN4I	GGNNCC	1 cut(s)	1691
PspPI	GGNCC	1 cut(s)	265
PspXI	VCTCGAGB	1 cut(s)	852
PstI	CTGCAG	1 cut(s)	1958
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	1 cut(s)	1689
RruI	TCGCGA	1 cut(s)	539
RsaI	GTAC	6 cut(s)	10, 66, 1772, 2255, 2261, 2282
RsaNI	GTAC	6 cut(s)	9, 65, 1771, 2254, 2260, 2281
RseI	CAYNNNNRTG	3 cut(s)	1778, 2132, 2177
SacI	GAGCTC	1 cut(s)	1762
SalI	GTCGAC	2 cut(s)	565, 719
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	9 cut(s)	86, 290, 396, 890, 1515, 1619, 1667, 2337, 2364
Sau3AI	GATC	5 cut(s)	709, 1555, 1689, 1722, 1727
Sau96I	GGNCC	1 cut(s)	265
SchI	GAGTC	2 cut(s)	864, 1034
ScrFI	CCNGG	7 cut(s)	27, 113, 269, 281, 1227, 2147, 2156
SduI	GDGCHC	1 cut(s)	1762
SexAI	ACCWGGT	1 cut(s)	1225
SfaNI	GCATC	9 cut(s)	80, 325, 837, 1114, 1186, 1663, 1667, 1959, 1966
SfcI	CTRYAG	3 cut(s)	1260, 1954, 2064
Sfr274I	CTCGAG	2 cut(s)	273, 852
SinI	GGWCC	1 cut(s)	265
SlaI	CTCGAG	2 cut(s)	273, 852
SmiMI	CAYNNNNRTG	3 cut(s)	1778, 2132, 2177
SmlI	CTYRAG	7 cut(s)	273, 443, 654, 686, 852, 1276, 1283
SmoI	CTYRAG	7 cut(s)	273, 443, 654, 686, 852, 1276, 1283
SphI	GCATGC	2 cut(s)	1017, 2018
SseBI	AGGCCT	1 cut(s)	1409
SsiI	CCGC	2 cut(s)	1072, 1442
SspI	AATATT	1 cut(s)	1389
SspMI	CTAG	5 cut(s)	81, 96, 381, 1697, 2117
SstI	GAGCTC	1 cut(s)	1762
StuI	AGGCCT	1 cut(s)	1409
StyD4I	CCNGG	7 cut(s)	25, 111, 267, 279, 1225, 2145, 2154
StyI	CCWWGG	3 cut(s)	380, 1431, 1500
TaaI	ACNGT	2 cut(s)	571, 1361
TaiI	ACGT	2 cut(s)	730, 1941
TaqI	TCGA	7 cut(s)	118, 218, 242, 274, 566, 720, 853
TatI	WGTACW	4 cut(s)	64, 1770, 2253, 2259
TauI	GCSGC	1 cut(s)	1445
Tru1I	TTAA	9 cut(s)	86, 290, 396, 890, 1515, 1619, 1667, 2337, 2364
Tru9I	TTAA	9 cut(s)	86, 290, 396, 890, 1515, 1619, 1667, 2337, 2364
TscAI	CASTG	4 cut(s)	1119, 1780, 1995, 2056
TseFI	GTSAC	1 cut(s)	2047
TseI	GCWGC	9 cut(s)	614, 671, 832, 1069, 1127, 1610, 1655, 2060, 2351
Tsp45I	GTSAC	1 cut(s)	2047
TspGWI	ACGGA	3 cut(s)	934, 1139, 1591
TspRI	CASTG	4 cut(s)	1119, 1780, 1995, 2056
Van91I	CCANNNNNTGG	2 cut(s)	1805, 2044
VpaK11BI	GGWCC	1 cut(s)	265
VspI	ATTAAT	2 cut(s)	890, 1515
XagI	CCTNNNNNAGG	1 cut(s)	1454
XapI	RAATTY	6 cut(s)	17, 130, 1025, 1270, 2138, 2315
XceI	RCATGY	4 cut(s)	62, 643, 1017, 2018
XhoI	CTCGAG	2 cut(s)	273, 852
XmaJI	CCTAGG	1 cut(s)	380
XmiI	GTMKAC	3 cut(s)	566, 720, 1605
XmnI	GAANNNNTTC	1 cut(s)	2240
XspI	CTAG	5 cut(s)	81, 96, 381, 1697, 2117
Zsp2I	ATGCAT	1 cut(s)	1526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.