Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0010496

Physical Location & Seq

Genomic Coordinates Reverse (-)

55604890 .. 55613927

Gene Structure 9038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG414200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGCTTTCTGCGAGGAAATTCAGCCACGGGAGAGCTTCAGTTTGCCCTTGTGTTTTATATGTTGTACAAGCATCGTATGCTAGTTTAAGTTTAGCTGGGTTGTTTGAATCTCAGGTTCGAGCTTATTCAAATGTTGGGTATGTTTCTGGGTCTGTTACTTCTTATTGTTTGGCCAAGTCCATTGTGCAAGATTGTATTTTGAGATTACCCAAAAAATCTATATCTGAAGTCGGTTCATTTTCGACTATGGCTGGAACAATCTTGGTCCAGGCTCGAGACCCGGCTAAGTTAAATGTGGAGATACAAAATGCAGTTGACGAGCATAGACTAAATGATGCGTGGAAGTTTTATGAGCAATATATGCAGATGGATGGGTTTCCTAGAAAATCTGTTATTAATAGGCTTTTAGCGGGTTTTGTAAAAAGCTCTGATGTTCAGTGGCTTGAGAAGGCTTATGGGTTGGTAGAGCAGGCTATTGGGGAAAACAAACAGAACTTGTTGGAGAGAAACACGCTGATTTATGTTTCATTTGGTCTTGCGAGAGCTGGGTTACCAGTTCCTGCATCGACTGTTTTGAGAAGAATGGTAGAAATGGAAGAATACCCTTCTGTTGCTGCTTGGTCTGCTGTCTTGGCATACATGTCTCAAACAGCTCAAGGGGCTTATGTTGCTGCTGAGTTGATTCTTGAGATAGGTTACTTGTTCCAAGATCACAGGATCGACCCACGTAAGAAGTGTAATGCACCTCTGATTGCTATGAAGCCTAATACTACTGCTTTCAACATTGCTTTGGCTGGTTGTCTCTTGTTTGGAACAACTAAGAAAGCAGAGCAGCTCCTTGACATGATGCCTCGAGTTGGTATCAAAACAGATGCTAACTTATTGATATTAATGGCACAAATATACGAGAGAAATGGACGGAGAGATGAGCTTAGAAAACTTCAAAGATACGTAGATGAAGCCCATAACCTAAGTGATGTCCAGTTTCGCCAGTTCTACAATTGCTTGCTGGCATGCCATTTGAAATTTGGGGATTTAGACTCTGCATCTAACATGGTTTTGGAAATGCTGCGGAAAGCAAAAGAAGCAAGAGGTTCTCTTGCAGTAGCAACTCTGGTATTTGATGCTGCTGGAAGGGGAAGCAAGTTCCCTCATGGAGTTAATTCTGGATCCTGGCATTATTCAAGCCATGGAGAATCATATGCTTATGGAGACAATAGGTTACCTGGTAATCTTGTATTATCTTACGAAGAGTTTTCAAGGGATAGAAATTTCTTGAGACTTGAGGGTGAGGCTAAGGAAGTGCTGGGTGCATTGTTAGCTAAATTGCAGAGCCAAGTTGAATTGGTAACAACTGACTGCGGTATCCTCCAGCCAACTGAAAAAATATTTGCGAAATTAGTCAAGGCCTTTCTAGAAGCAGACAAAACCAAGGATTTGGCTGCTTTTCTTATAAAGGCAGATAAAGAAGATTCCCCAGCTTCCAATGATGACTCAGCCTTGGTTCATGTCATTAATTCATGCATATCGCTTGGATGGTTAGACAAGGCACATGACCTTCTTGATGAAATGTGCTTGGCTGGTGTAAGAACTGGTTCTTCTGTATACGCCACTCTTTTAAAAGCATATTGTGAAGCAAACCAAGCCGGAAATGCAGCATCACTATTAAGAGATGCTCGTAAGGCTGGTATCCAGCTAGATGCAAGCAGTTATGAGGCACTGATCCGATCGAAGGTGCTTCAAAATGATACACAGGGAGCTCTTCATTTGTACACAGAGATGAAAGAGGCTAAGATTCCAAAAGCCGGTCATCAGGAGTTTGAGAGGTTGGTGAAGGAATGTGCAGAGGGTTGTGAACCGAGGTTGATGGTAAAGCTGTTGCAGGAAATAAGGGAAGGGCAGGTGACGTTGGATTCTGCGGTTCATGACTGGAACAATGTAATCCACTTTTTCTGCAGGAAGAGATTGATGCAAGATGCTGAGAAGGCTCTGAAAAAGATGAGAAGTCTCGGGCATGCCCCAAATGCTCAAACTTTCCATTCTATGGTTACTGGGTATGCTGCTGTAGGAGGAAAGTATATAGAGGTAACAGAGCTGTGGGGAGAGATGAAGTCTCTAGCTTTTAACACCTCAATGAAATTTGATCAGGAACTCCTGGATTCTGTTCTTTACACTTTCGTTAGGGGTGGGTTTTTCAGTAGAGCAAATGAAGTCTTGGACATGATGGAGAAAGCGAAGATGTTCATTGACAAGTACAAGTACAGAACACTCTTCTTGAAGTACCATAAAACACTTCACAAAGGCAAAGCTCCCAAATTCCAGACAGAATCCCAACATAAAAAGAGAGAAGCAGCGTTAGCATTTAAGAACTGGATAGGAGTGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

795

Amino Acids

88.87

Weight (kDa)

8.73

Isoelectric Point (pI)

36.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_At1g68980	PF25245	92 - 221	5.9e-09	At1g68980, TPR repeats
PPR_2	PF13041	644 - 687	1e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03100
fragaria_vesca	FvH4_5g32870
malus_domestica	MD11G1281500.v1.1
prunus_persica	Prupe.8G237400_v2.0.a1
pyrus_communis	pycom11g24960
rosa_chinensis	RchiOBHm_Chr7g0230741 RchiOBHm_Chr7g0230851
rosa_laevigata	RLG00000001478
rosa_multiflora	Rmu_sc0007883.1_g000006 Rmu_sc0010407.1_g000003
rosa_roxburghii	Rroxscaffold_3G00229770
rosa_rugosa	Rorug07G0262500
rosa_samantha	Rh7AG414200 Rh7AG414900 Rh7BG391400 Rh7CG433100 Rh7CG433600 Rh7DG409800
rosa_wichuraiana	Rw7G034240 Rw7G034270 Rw7G034390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AarI	CACCTGC	1 cut(s)	1891
Acc36I	ACCTGC	1 cut(s)	1891
AccB7I	CCANNNNNTGG	1 cut(s)	2044
AccI	GTMKAC	1 cut(s)	1605
AciI	CCGC	4 cut(s)	410, 1072, 1362, 1919
AclWI	GGATC	4 cut(s)	725, 1164, 1177, 1717
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	5 cut(s)	17, 1025, 1270, 2138, 2315
AcuI	CTGAAG	2 cut(s)	21, 246
AfaI	GTAC	5 cut(s)	66, 1772, 2255, 2261, 2282
AfiI	CCNNNNNNNGG	4 cut(s)	857, 1732, 1805, 2044
AflIII	ACRYGT	1 cut(s)	639
AjnI	CCWGG	4 cut(s)	267, 1172, 1225, 2154
Alw21I	GWGCWC	1 cut(s)	1762
Alw26I	GTCTC	7 cut(s)	270, 648, 806, 1206, 1273, 2012, 2118
AlwI	GGATC	4 cut(s)	725, 1164, 1177, 1717
AlwNI	CAGNNNCTG	1 cut(s)	560
Ama87I	CYCGRG	3 cut(s)	273, 852, 2009
AoxI	GGCC	2 cut(s)	171, 1407
ApeKI	GCWGC	9 cut(s)	614, 671, 832, 1069, 1127, 1442, 1655, 2060, 2351
ApoI	RAATTY	5 cut(s)	17, 1025, 1270, 2138, 2315
AseI	ATTAAT	3 cut(s)	396, 890, 1515
Asp700I	GAANNNNTTC	2 cut(s)	1594, 2240
AspS9I	GGNCC	1 cut(s)	265
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	3 cut(s)	1301, 1843, 1915
AvaI	CYCGRG	3 cut(s)	273, 852, 2009
AvaII	GGWCC	1 cut(s)	265
BaeI	ACNNNNGTAYC	2 cut(s)	1348, 1381
BalI	TGGCCA	1 cut(s)	173
BamHI	GGATCC	1 cut(s)	1169
BanII	GRGCYC	1 cut(s)	1762
Bbv12I	GWGCWC	1 cut(s)	1762
BbvI	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1429, 1667, 2047, 2363
BccI	CCATC	5 cut(s)	361, 365, 1530, 1861, 2218
BciT130I	CCWGG	4 cut(s)	269, 1174, 1227, 2156
BciVI	GTATCC	2 cut(s)	1376, 1700
BclI	TGATCA	1 cut(s)	2143
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	7 cut(s)	270, 648, 806, 1206, 1273, 2012, 2118
BfaI	CTAG	5 cut(s)	81, 381, 1415, 1697, 2117
BfmI	CTRYAG	2 cut(s)	1954, 2064
BfuAI	ACCTGC	1 cut(s)	1891
BfuI	GTATCC	2 cut(s)	1376, 1700
BisI	GCNGC	9 cut(s)	615, 672, 833, 1070, 1128, 1443, 1656, 2061, 2352
BlsI	GCNGC	9 cut(s)	616, 673, 834, 1071, 1129, 1444, 1657, 2062, 2353
Bme1390I	CCNGG	5 cut(s)	269, 281, 1174, 1227, 2156
Bme18I	GGWCC	1 cut(s)	265
BmeT110I	CYCGRG	3 cut(s)	273, 852, 2009
BmgT120I	GGNCC	1 cut(s)	265
BmiI	GGNNCC	1 cut(s)	1171
BmrFI	CCNGG	5 cut(s)	269, 281, 1174, 1227, 2156
BmrI	ACTGGG	1 cut(s)	2061
BmuI	ACTGGG	1 cut(s)	2061
BpmI	CTGGAG	1 cut(s)	1355
Bpu10I	CCTNAGC	1 cut(s)	1296
BpuEI	CTTGAG	5 cut(s)	464, 639, 707, 1297, 1304
BpuMI	CCSGG	1 cut(s)	281
BsaAI	YACGTR	2 cut(s)	728, 952
BsaI	GGTCTC	1 cut(s)	270
BsaJI	CCNNGG	5 cut(s)	25, 1189, 1431, 1500, 1859
Bsc4I	CCNNNNNNNGG	4 cut(s)	857, 1732, 1805, 2044
Bse118I	RCCGGY	1 cut(s)	1805
Bse1I	ACTGG	7 cut(s)	554, 982, 991, 1597, 1934, 2056, 2375
Bse3DI	GCAATG	1 cut(s)	783
BseBI	CCWGG	4 cut(s)	269, 1174, 1227, 2156
BseDI	CCNNGG	5 cut(s)	25, 1189, 1431, 1500, 1859
BseGI	GGATG	2 cut(s)	376, 1541
BseLI	CCNNNNNNNGG	4 cut(s)	857, 1732, 1805, 2044
BseMI	GCAATG	1 cut(s)	783
BseMII	CTCAG	4 cut(s)	125, 666, 1509, 1971
BseNI	ACTGG	7 cut(s)	554, 982, 991, 1597, 1934, 2056, 2375
BseXI	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1429, 1667, 2047, 2363
BseYI	CCCAGC	4 cut(s)	95, 545, 1306, 1477
BsgI	GTGCAG	1 cut(s)	1863
Bsh1285I	CGRYCG	1 cut(s)	1730
BshFI	GGCC	2 cut(s)	173, 1409
BsiEI	CGRYCG	1 cut(s)	1730
BsiHKAI	GWGCWC	1 cut(s)	1762
BsiHKCI	CYCGRG	3 cut(s)	273, 852, 2009
BsiSI	CCGG	3 cut(s)	281, 1647, 1806
BslI	CCNNNNNNNGG	4 cut(s)	857, 1732, 1805, 2044
BsmAI	GTCTC	7 cut(s)	270, 648, 806, 1206, 1273, 2012, 2118
BsnI	GGCC	2 cut(s)	173, 1409
Bso31I	GGTCTC	1 cut(s)	270
BsoBI	CYCGRG	3 cut(s)	273, 852, 2009
Bsp1286I	GDGCHC	1 cut(s)	1762
Bsp1407I	TGTACA	2 cut(s)	64, 1770
Bsp143I	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
Bsp19I	CCATGG	1 cut(s)	1189
BspACI	CCGC	4 cut(s)	410, 1072, 1362, 1919
BspANI	GGCC	2 cut(s)	173, 1409
BspCNI	CTCAG	4 cut(s)	124, 667, 1508, 1972
BspHI	TCATGA	1 cut(s)	1924
BspLI	GGNNCC	1 cut(s)	1171
BspMAI	CTGCAG	1 cut(s)	1958
BspMI	ACCTGC	1 cut(s)	1891
BspPI	GGATC	4 cut(s)	725, 1164, 1177, 1717
BspQI	GCTCTTC	1 cut(s)	1767
BspTNI	GGTCTC	1 cut(s)	270
BsrDI	GCAATG	1 cut(s)	783
BsrFI	RCCGGY	1 cut(s)	1805
BsrGI	TGTACA	2 cut(s)	64, 1770
BsrI	ACTGG	7 cut(s)	554, 982, 991, 1597, 1934, 2056, 2375
BssAI	RCCGGY	1 cut(s)	1805
BssECI	CCNNGG	5 cut(s)	25, 1189, 1431, 1500, 1859
BssMI	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
BssNAI	GTATAC	1 cut(s)	1606
BssT1I	CCWWGG	3 cut(s)	1189, 1431, 1500
Bst1107I	GTATAC	1 cut(s)	1606
Bst2UI	CCWGG	4 cut(s)	269, 1174, 1227, 2156
Bst4CI	ACNGT	1 cut(s)	571
Bst6I	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
BstAPI	GCANNNNNTGC	2 cut(s)	77, 361
BstAUI	TGTACA	2 cut(s)	64, 1770
BstBAI	YACGTR	2 cut(s)	728, 952
BstC8I	GCNNGC	6 cut(s)	471, 1007, 1011, 1015, 1705, 2016
BstDSI	CCRYGG	2 cut(s)	25, 1189
BstEII	GGTNACC	2 cut(s)	549, 1221
BstF5I	GGATG	2 cut(s)	376, 1541
BstKTI	GATC	6 cut(s)	712, 720, 1172, 1725, 1730, 2146
BstMAI	GTCTC	7 cut(s)	270, 648, 806, 1206, 1273, 2012, 2118
BstMBI	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
BstMCI	CGRYCG	1 cut(s)	1730
BstNI	CCWGG	4 cut(s)	269, 1174, 1227, 2156
BstNSI	RCATGY	3 cut(s)	643, 1017, 2018
BstPI	GGTNACC	2 cut(s)	549, 1221
BstSCI	CCNGG	5 cut(s)	267, 279, 1172, 1225, 2154
BstSFI	CTRYAG	2 cut(s)	1954, 2064
BstSNI	TACGTA	1 cut(s)	952
BstV1I	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1429, 1667, 2047, 2363
BstX2I	RGATCY	1 cut(s)	1169
BstXI	CCANNNNNNTGG	1 cut(s)	1438
BstYI	RGATCY	1 cut(s)	1169
BstZ17I	GTATAC	1 cut(s)	1606
BsuI	GTATCC	2 cut(s)	1376, 1700
BsuRI	GGCC	2 cut(s)	173, 1409
BtgI	CCRYGG	2 cut(s)	25, 1189
BtsCI	GGATG	2 cut(s)	376, 1541
BtsIMutI	CAGTG	2 cut(s)	443, 1718
BveI	ACCTGC	1 cut(s)	1891
Cac8I	GCNNGC	6 cut(s)	471, 1007, 1011, 1015, 1705, 2016
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	1 cut(s)	1924
Cfr10I	RCCGGY	1 cut(s)	1805
Cfr13I	GGNCC	1 cut(s)	265
CsiI	ACCWGGT	1 cut(s)	1225
Csp6I	GTAC	5 cut(s)	65, 1771, 2254, 2260, 2281
CviQI	GTAC	5 cut(s)	65, 1771, 2254, 2260, 2281
DpnI	GATC	6 cut(s)	711, 719, 1171, 1724, 1729, 2145
DpnII	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
DraI	TTTAAA	1 cut(s)	1620
EaeI	YGGCCR	1 cut(s)	171
Eam1104I	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
EarI	CTCTTC	4 cut(s)	1245, 1767, 1955, 2276
Ecl136II	GAGCTC	1 cut(s)	1760
Eco105I	TACGTA	1 cut(s)	952
Eco130I	CCWWGG	3 cut(s)	1189, 1431, 1500
Eco147I	AGGCCT	1 cut(s)	1409
Eco24I	GRGCYC	1 cut(s)	1762
Eco31I	GGTCTC	1 cut(s)	270
Eco47I	GGWCC	1 cut(s)	265
Eco53kI	GAGCTC	1 cut(s)	1760
Eco57I	CTGAAG	2 cut(s)	21, 246
Eco88I	CYCGRG	3 cut(s)	273, 852, 2009
Eco91I	GGTNACC	2 cut(s)	549, 1221
EcoICRI	GAGCTC	1 cut(s)	1760
EcoO65I	GGTNACC	2 cut(s)	549, 1221
EcoRII	CCWGG	4 cut(s)	267, 1172, 1225, 2154
EcoT14I	CCWWGG	3 cut(s)	1189, 1431, 1500
EcoT22I	ATGCAT	1 cut(s)	1526
EcoT38I	GRGCYC	1 cut(s)	1762
ErhI	CCWWGG	3 cut(s)	1189, 1431, 1500
FauI	CCCGC	1 cut(s)	403
FauNDI	CATATG	1 cut(s)	1201
FbaI	TGATCA	1 cut(s)	2143
FblI	GTMKAC	1 cut(s)	1605
Fnu4HI	GCNGC	9 cut(s)	615, 672, 833, 1070, 1128, 1443, 1656, 2061, 2352
FokI	GGATG	2 cut(s)	383, 1548
FriOI	GRGCYC	1 cut(s)	1762
Fsp4HI	GCNGC	9 cut(s)	615, 672, 833, 1070, 1128, 1443, 1656, 2061, 2352
FspBI	CTAG	5 cut(s)	81, 381, 1415, 1697, 2117
GluI	GCNGC	9 cut(s)	615, 672, 833, 1070, 1128, 1443, 1656, 2061, 2352
GsaI	CCCAGC	4 cut(s)	99, 549, 1310, 1481
GsuI	CTGGAG	1 cut(s)	1355
HaeIII	GGCC	2 cut(s)	173, 1409
HapII	CCGG	3 cut(s)	281, 1647, 1806
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HpaII	CCGG	3 cut(s)	281, 1647, 1806
HphI	GGTGA	3 cut(s)	1301, 1843, 1915
Hpy166II	GTNNAC	4 cut(s)	316, 1606, 1773, 1856
Hpy188I	TCNGA	5 cut(s)	226, 430, 750, 1727, 1992
Hpy8I	GTNNAC	4 cut(s)	316, 1606, 1773, 1856
HpyAV	CCTTC	8 cut(s)	442, 615, 1128, 1568, 1726, 1828, 1889, 1978
HpyCH4III	ACNGT	1 cut(s)	571
HpyCH4IV	ACGT	3 cut(s)	727, 951, 1907
HpySE526I	ACGT	3 cut(s)	727, 951, 1907
Ksp22I	TGATCA	1 cut(s)	2143
Kzo9I	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	3 cut(s)	840, 1757, 2314
Lsp1109I	GCAGC	9 cut(s)	601, 658, 844, 1056, 1114, 1429, 1667, 2047, 2363
MabI	ACCWGGT	1 cut(s)	1225
MaeI	CTAG	5 cut(s)	81, 381, 1415, 1697, 2117
MaeII	ACGT	3 cut(s)	727, 951, 1907
MaeIII	GTNAC	8 cut(s)	154, 549, 695, 1221, 1348, 1903, 2047, 2086
MalI	GATC	6 cut(s)	711, 719, 1171, 1724, 1729, 2145
MboI	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
MboII	GAAGA	9 cut(s)	591, 608, 1262, 1481, 1590, 1754, 1972, 2248, 2263
MfeI	CAATTG	1 cut(s)	1000
MflI	RGATCY	1 cut(s)	1169
MhlI	GDGCHC	1 cut(s)	1762
MlsI	TGGCCA	1 cut(s)	173
MluNI	TGGCCA	1 cut(s)	173
MlyI	GAGTC	2 cut(s)	1034, 1487
MmeI	TCCRAC	2 cut(s)	480, 1890
Mox20I	TGGCCA	1 cut(s)	173
Mph1103I	ATGCAT	1 cut(s)	1526
MroXI	GAANNNNTTC	2 cut(s)	1594, 2240
MscI	TGGCCA	1 cut(s)	173
MslI	CAYNNNNRTG	2 cut(s)	1778, 2132
Msp20I	TGGCCA	1 cut(s)	173
MspI	CCGG	3 cut(s)	281, 1647, 1806
MspR9I	CCNGG	5 cut(s)	269, 281, 1174, 1227, 2156
MunI	CAATTG	1 cut(s)	1000
MvaI	CCWGG	4 cut(s)	269, 1174, 1227, 2156
NciI	CCSGG	1 cut(s)	281
NcoI	CCATGG	1 cut(s)	1189
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
NlaIV	GGNNCC	1 cut(s)	1171
NmuCI	GTSAC	1 cut(s)	1903
NsiI	ATGCAT	1 cut(s)	1526
NspI	RCATGY	3 cut(s)	643, 1017, 2018
PaeI	GCATGC	2 cut(s)	1017, 2018
PaeR7I	CTCGAG	2 cut(s)	273, 852
PagI	TCATGA	1 cut(s)	1924
PaqCI	CACCTGC	1 cut(s)	1891
PceI	AGGCCT	1 cut(s)	1409
PciI	ACATGT	1 cut(s)	639
PciSI	GCTCTTC	1 cut(s)	1767
PdmI	GAANNNNTTC	2 cut(s)	1594, 2240
PfeI	GAWTC	8 cut(s)	107, 682, 1196, 1472, 1795, 1913, 2159, 2327
PflMI	CCANNNNNTGG	1 cut(s)	2044
PfoI	TCCNGGA	1 cut(s)	2154
PkrI	GCNGC	9 cut(s)	616, 673, 834, 1071, 1129, 1444, 1657, 2062, 2353
Ple19I	CGATCG	1 cut(s)	1730
PleI	GAGTC	2 cut(s)	1034, 1487
PpsI	GAGTC	2 cut(s)	1034, 1487
Ppu21I	YACGTR	2 cut(s)	728, 952
PscI	ACATGT	1 cut(s)	639
PshBI	ATTAAT	3 cut(s)	396, 890, 1515
PsiI	TTATAA	1 cut(s)	1454
Psp124BI	GAGCTC	1 cut(s)	1762
Psp6I	CCWGG	4 cut(s)	267, 1172, 1225, 2154
PspEI	GGTNACC	2 cut(s)	549, 1221
PspFI	CCCAGC	4 cut(s)	95, 545, 1306, 1477
PspGI	CCWGG	4 cut(s)	267, 1172, 1225, 2154
PspN4I	GGNNCC	1 cut(s)	1171
PspPI	GGNCC	1 cut(s)	265
PspXI	VCTCGAGB	1 cut(s)	852
PstI	CTGCAG	1 cut(s)	1958
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	1 cut(s)	1169
PvuI	CGATCG	1 cut(s)	1730
RsaI	GTAC	5 cut(s)	66, 1772, 2255, 2261, 2282
RsaNI	GTAC	5 cut(s)	65, 1771, 2254, 2260, 2281
RseI	CAYNNNNRTG	2 cut(s)	1778, 2132
SacI	GAGCTC	1 cut(s)	1762
SapI	GCTCTTC	1 cut(s)	1767
SatI	GCNGC	9 cut(s)	615, 672, 833, 1070, 1128, 1443, 1656, 2061, 2352
Sau3AI	GATC	6 cut(s)	709, 717, 1169, 1722, 1727, 2143
Sau96I	GGNCC	1 cut(s)	265
SchI	GAGTC	2 cut(s)	1034, 1487
ScrFI	CCNGG	5 cut(s)	269, 281, 1174, 1227, 2156
SduI	GDGCHC	1 cut(s)	1762
SexAI	ACCWGGT	1 cut(s)	1225
SfcI	CTRYAG	2 cut(s)	1954, 2064
Sfr274I	CTCGAG	2 cut(s)	273, 852
SinI	GGWCC	1 cut(s)	265
SlaI	CTCGAG	2 cut(s)	273, 852
SmiMI	CAYNNNNRTG	2 cut(s)	1778, 2132
SmlI	CTYRAG	7 cut(s)	273, 443, 654, 686, 852, 1276, 1283
SmoI	CTYRAG	7 cut(s)	273, 443, 654, 686, 852, 1276, 1283
SnaBI	TACGTA	1 cut(s)	952
SphI	GCATGC	2 cut(s)	1017, 2018
SseBI	AGGCCT	1 cut(s)	1409
SsiI	CCGC	4 cut(s)	410, 1072, 1362, 1919
SspI	AATATT	1 cut(s)	1389
SspMI	CTAG	5 cut(s)	81, 381, 1415, 1697, 2117
SstI	GAGCTC	1 cut(s)	1762
StuI	AGGCCT	1 cut(s)	1409
StyD4I	CCNGG	5 cut(s)	267, 279, 1172, 1225, 2154
StyI	CCWWGG	3 cut(s)	1189, 1431, 1500
TaaI	ACNGT	1 cut(s)	571
TaiI	ACGT	3 cut(s)	730, 954, 1910
TaqI	TCGA	7 cut(s)	118, 242, 274, 566, 720, 853, 1730
TatI	WGTACW	4 cut(s)	64, 1770, 2253, 2259
TfiI	GAWTC	8 cut(s)	107, 682, 1196, 1472, 1795, 1913, 2159, 2327
TscAI	CASTG	2 cut(s)	443, 1725
TseFI	GTSAC	1 cut(s)	1903
TseI	GCWGC	9 cut(s)	614, 671, 832, 1069, 1127, 1442, 1655, 2060, 2351
Tsp45I	GTSAC	1 cut(s)	1903
TspGWI	ACGGA	1 cut(s)	934
TspRI	CASTG	2 cut(s)	443, 1725
Van91I	CCANNNNNTGG	1 cut(s)	2044
VpaK11BI	GGWCC	1 cut(s)	265
VspI	ATTAAT	3 cut(s)	396, 890, 1515
XapI	RAATTY	5 cut(s)	17, 1025, 1270, 2138, 2315
XbaI	TCTAGA	1 cut(s)	1414
XceI	RCATGY	3 cut(s)	643, 1017, 2018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1025
XhoI	CTCGAG	2 cut(s)	273, 852
XmiI	GTMKAC	1 cut(s)	1605
XmnI	GAANNNNTTC	2 cut(s)	1594, 2240
XspI	CTAG	5 cut(s)	81, 381, 1415, 1697, 2117
Zsp2I	ATGCAT	1 cut(s)	1526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.