tRNA-specific 2-thiouridylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51310 |
| fragaria_vesca | FvH4_5g33050 FvH4_5g33050 FvH4_5g33050 |
| malus_domestica | MD03G1176400.v1.1 MD11G1196700.v1.1 |
| prunus_persica | Prupe.5G028600_v2.0.a1 Prupe.5G028600_v2.0.a1 |
| pyrus_communis | pycom03g13370 pycom11g16970 |
| rosa_chinensis | RchiOBHm_Chr7g0231131 |
| rosa_laevigata | RLG00000001432 |
| rosa_multiflora | Rmu_co8502733.1_g000001 Rmu_sc0012403.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00030590 Rroxscaffold_5G00347570 |
| rosa_rugosa | Rorug07G0264900 |
| rosa_samantha | Rh7AG417700 Rh7BG393900 Rh7CG437700 Rh7DG411700 |
| rosa_wichuraiana | Rw7G034590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 287 |
| Acc36I | ACCTGC | 1 cut(s) | 1319 |
| AccI | GTMKAC | 1 cut(s) | 279 |
| AccIII | TCCGGA | 1 cut(s) | 1322 |
| AciI | CCGC | 8 cut(s) | 153, 270, 273, 298, 312, 330, 443, 1277 |
| AclWI | GGATC | 3 cut(s) | 708, 1101, 1114 |
| AcoI | YGGCCR | 1 cut(s) | 517 |
| AcsI | RAATTY | 5 cut(s) | 345, 560, 843, 875, 1433 |
| AcuI | CTGAAG | 1 cut(s) | 1275 |
| AdeI | CACNNNGTG | 1 cut(s) | 1045 |
| AfaI | GTAC | 3 cut(s) | 456, 1195, 1369 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1116, 1276 |
| AflII | CTTAAG | 1 cut(s) | 740 |
| AgeI | ACCGGT | 1 cut(s) | 1420 |
| AgsI | TTSAA | 6 cut(s) | 356, 406, 503, 1114, 1208, 1382 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 208 |
| AjnI | CCWGG | 3 cut(s) | 1000, 1010, 1299 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 113, 145 |
| AluBI | AGCT | 6 cut(s) | 419, 739, 1153, 1248, 1292, 1376 |
| AluI | AGCT | 6 cut(s) | 419, 739, 1153, 1248, 1292, 1376 |
| Alw26I | GTCTC | 2 cut(s) | 920, 1134 |
| AlwI | GGATC | 3 cut(s) | 708, 1101, 1114 |
| Aor13HI | TCCGGA | 1 cut(s) | 1322 |
| AoxI | GGCC | 3 cut(s) | 517, 1175, 1267 |
| ApeKI | GCWGC | 3 cut(s) | 155, 1274, 1289 |
| ApoI | RAATTY | 5 cut(s) | 345, 560, 843, 875, 1433 |
| AsiGI | ACCGGT | 1 cut(s) | 1420 |
| AspLEI | GCGC | 2 cut(s) | 996, 1092 |
| AspS9I | GGNCC | 4 cut(s) | 733, 1007, 1175, 1267 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 1226 |
| AvaII | GGWCC | 2 cut(s) | 733, 1007 |
| BamHI | GGATCC | 1 cut(s) | 1106 |
| BbsI | GAAGAC | 2 cut(s) | 562, 1404 |
| BbvI | GCAGC | 3 cut(s) | 142, 1286, 1301 |
| BccI | CCATC | 3 cut(s) | 155, 1214, 1387 |
| BceAI | ACGGC | 1 cut(s) | 242 |
| BciT130I | CCWGG | 3 cut(s) | 1002, 1012, 1301 |
| BclI | TGATCA | 2 cut(s) | 1261, 1348 |
| BcoDI | GTCTC | 2 cut(s) | 920, 1134 |
| BfaI | CTAG | 4 cut(s) | 446, 612, 1271, 1389 |
| BfmI | CTRYAG | 2 cut(s) | 645, 1154 |
| BfoI | RGCGCY | 1 cut(s) | 1093 |
| BfrI | CTTAAG | 1 cut(s) | 740 |
| BfuAI | ACCTGC | 1 cut(s) | 1319 |
| BglII | AGATCT | 1 cut(s) | 934 |
| BisI | GCNGC | 6 cut(s) | 156, 271, 312, 443, 1275, 1290 |
| BlpI | GCTNAGC | 1 cut(s) | 266 |
| BlsI | GCNGC | 6 cut(s) | 157, 272, 313, 444, 1276, 1291 |
| Bme1390I | CCNGG | 3 cut(s) | 1002, 1012, 1301 |
| Bme18I | GGWCC | 2 cut(s) | 733, 1007 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 208 |
| BmgT120I | GGNCC | 4 cut(s) | 733, 1007, 1175, 1267 |
| BmiI | GGNNCC | 3 cut(s) | 1009, 1108, 1321 |
| BmrFI | CCNGG | 3 cut(s) | 1002, 1012, 1301 |
| BmsI | GCATC | 2 cut(s) | 201, 568 |
| BpiI | GAAGAC | 2 cut(s) | 562, 1404 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1315 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 266 |
| BpuEI | CTTGAG | 1 cut(s) | 822 |
| Bsa29I | ATCGAT | 1 cut(s) | 511 |
| BsaI | GGTCTC | 1 cut(s) | 1134 |
| BsaJI | CCNNGG | 5 cut(s) | 389, 940, 1000, 1010, 1300 |
| BsaWI | WCCGGW | 3 cut(s) | 1322, 1420, 1441 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1116, 1276 |
| Bse118I | RCCGGY | 2 cut(s) | 314, 1420 |
| Bse3DI | GCAATG | 3 cut(s) | 15, 39, 1231 |
| BseAI | TCCGGA | 1 cut(s) | 1322 |
| BseBI | CCWGG | 3 cut(s) | 1002, 1012, 1301 |
| BseCI | ATCGAT | 1 cut(s) | 511 |
| BseDI | CCNNGG | 5 cut(s) | 389, 940, 1000, 1010, 1300 |
| BseGI | GGATG | 3 cut(s) | 583, 1351, 1398 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1116, 1276 |
| BseMI | GCAATG | 3 cut(s) | 15, 39, 1231 |
| BseMII | CTCAG | 2 cut(s) | 280, 743 |
| BseRI | GAGGAG | 3 cut(s) | 35, 171, 293 |
| BseXI | GCAGC | 3 cut(s) | 142, 1286, 1301 |
| BseYI | CCCAGC | 1 cut(s) | 1135 |
| BsgI | GTGCAG | 1 cut(s) | 310 |
| BshFI | GGCC | 3 cut(s) | 519, 1177, 1269 |
| BshTI | ACCGGT | 1 cut(s) | 1420 |
| BshVI | ATCGAT | 1 cut(s) | 511 |
| BsiSI | CCGG | 4 cut(s) | 315, 1323, 1421, 1442 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1116, 1276 |
| BsmAI | GTCTC | 2 cut(s) | 920, 1134 |
| BsmI | GAATGC | 1 cut(s) | 389 |
| BsnI | GGCC | 3 cut(s) | 519, 1177, 1269 |
| Bso31I | GGTCTC | 1 cut(s) | 1134 |
| Bsp13I | TCCGGA | 1 cut(s) | 1322 |
| Bsp1407I | TGTACA | 2 cut(s) | 454, 1367 |
| Bsp143I | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 266 |
| Bsp19I | CCATGG | 1 cut(s) | 389 |
| BspACI | CCGC | 8 cut(s) | 153, 270, 273, 298, 312, 330, 443, 1277 |
| BspANI | GGCC | 3 cut(s) | 519, 1177, 1269 |
| BspCNI | CTCAG | 2 cut(s) | 279, 742 |
| BspDI | ATCGAT | 1 cut(s) | 511 |
| BspEI | TCCGGA | 1 cut(s) | 1322 |
| BspLI | GGNNCC | 3 cut(s) | 1009, 1108, 1321 |
| BspMAI | CTGCAG | 1 cut(s) | 649 |
| BspMI | ACCTGC | 1 cut(s) | 1319 |
| BspPI | GGATC | 3 cut(s) | 708, 1101, 1114 |
| BspTI | CTTAAG | 1 cut(s) | 740 |
| BspTNI | GGTCTC | 1 cut(s) | 1134 |
| BsrDI | GCAATG | 3 cut(s) | 15, 39, 1231 |
| BsrFI | RCCGGY | 2 cut(s) | 314, 1420 |
| BsrGI | TGTACA | 2 cut(s) | 454, 1367 |
| BssAI | RCCGGY | 2 cut(s) | 314, 1420 |
| BssECI | CCNNGG | 5 cut(s) | 389, 940, 1000, 1010, 1300 |
| BssMI | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| BssT1I | CCWWGG | 2 cut(s) | 389, 940 |
| Bst2UI | CCWGG | 3 cut(s) | 1002, 1012, 1301 |
| Bst4CI | ACNGT | 3 cut(s) | 590, 1158, 1198 |
| Bst6I | CTCTTC | 3 cut(s) | 134, 498, 1413 |
| BstAFI | CTTAAG | 1 cut(s) | 740 |
| BstAUI | TGTACA | 2 cut(s) | 454, 1367 |
| BstDEI | CTNAG | 3 cut(s) | 266, 729, 1315 |
| BstDSI | CCRYGG | 1 cut(s) | 389 |
| BstF5I | GGATG | 3 cut(s) | 583, 1351, 1398 |
| BstH2I | RGCGCY | 1 cut(s) | 1093 |
| BstHHI | GCGC | 2 cut(s) | 996, 1092 |
| BstKTI | GATC | 9 cut(s) | 652, 703, 811, 937, 1109, 1146, 1264, 1351, 1431 |
| BstMAI | GTCTC | 2 cut(s) | 920, 1134 |
| BstMBI | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| BstNI | CCWGG | 3 cut(s) | 1002, 1012, 1301 |
| BstSCI | CCNGG | 3 cut(s) | 1000, 1010, 1299 |
| BstSFI | CTRYAG | 2 cut(s) | 645, 1154 |
| BstV1I | GCAGC | 3 cut(s) | 142, 1286, 1301 |
| BstV2I | GAAGAC | 2 cut(s) | 562, 1404 |
| BstX2I | RGATCY | 2 cut(s) | 934, 1106 |
| BstYI | RGATCY | 2 cut(s) | 934, 1106 |
| Bsu15I | ATCGAT | 1 cut(s) | 511 |
| BsuRI | GGCC | 3 cut(s) | 519, 1177, 1269 |
| BsuTUI | ATCGAT | 1 cut(s) | 511 |
| BtgI | CCRYGG | 1 cut(s) | 389 |
| BtsCI | GGATG | 3 cut(s) | 583, 1351, 1398 |
| BtsI | GCAGTG | 1 cut(s) | 292 |
| BtsIMutI | CAGTG | 3 cut(s) | 292, 877, 1163 |
| BveI | ACCTGC | 1 cut(s) | 1319 |
| CfoI | GCGC | 2 cut(s) | 996, 1092 |
| Cfr10I | RCCGGY | 2 cut(s) | 314, 1420 |
| Cfr13I | GGNCC | 4 cut(s) | 733, 1007, 1175, 1267 |
| ClaI | ATCGAT | 1 cut(s) | 511 |
| Csp6I | GTAC | 3 cut(s) | 455, 1194, 1368 |
| CspAI | ACCGGT | 1 cut(s) | 1420 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 787, 822 |
| CviAII | CATG | 7 cut(s) | 229, 390, 574, 691, 1124, 1172, 1211 |
| CviQI | GTAC | 3 cut(s) | 455, 1194, 1368 |
| DdeI | CTNAG | 3 cut(s) | 266, 729, 1315 |
| DpnI | GATC | 9 cut(s) | 651, 702, 810, 936, 1108, 1145, 1263, 1350, 1430 |
| DpnII | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| DraIII | CACNNNGTG | 1 cut(s) | 1045 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 287 |
| DriI | GACNNNNNGTC | 1 cut(s) | 208 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 287 |
| EaeI | YGGCCR | 1 cut(s) | 517 |
| Eam1104I | CTCTTC | 3 cut(s) | 134, 498, 1413 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 208 |
| EarI | CTCTTC | 3 cut(s) | 134, 498, 1413 |
| EciI | GGCGGA | 1 cut(s) | 287 |
| Eco130I | CCWWGG | 2 cut(s) | 389, 940 |
| Eco31I | GGTCTC | 1 cut(s) | 1134 |
| Eco47I | GGWCC | 2 cut(s) | 733, 1007 |
| Eco57I | CTGAAG | 1 cut(s) | 1275 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1007, 1267 |
| EcoRII | CCWGG | 3 cut(s) | 1000, 1010, 1299 |
| EcoT14I | CCWWGG | 2 cut(s) | 389, 940 |
| ErhI | CCWWGG | 2 cut(s) | 389, 940 |
| FaeI | CATG | 7 cut(s) | 232, 393, 577, 694, 1127, 1175, 1214 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 29 |
| FatI | CATG | 7 cut(s) | 228, 389, 573, 690, 1123, 1171, 1210 |
| FauI | CCCGC | 1 cut(s) | 1270 |
| FbaI | TGATCA | 2 cut(s) | 1261, 1348 |
| FblI | GTMKAC | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 6 cut(s) | 156, 271, 312, 443, 1275, 1290 |
| FokI | GGATG | 3 cut(s) | 590, 1358, 1405 |
| Fsp4HI | GCNGC | 6 cut(s) | 156, 271, 312, 443, 1275, 1290 |
| FspBI | CTAG | 4 cut(s) | 446, 612, 1271, 1389 |
| GlaI | GCGC | 2 cut(s) | 995, 1091 |
| GluI | GCNGC | 6 cut(s) | 156, 271, 312, 443, 1275, 1290 |
| GsaI | CCCAGC | 1 cut(s) | 1139 |
| HaeII | RGCGCY | 1 cut(s) | 1093 |
| HaeIII | GGCC | 3 cut(s) | 519, 1177, 1269 |
| HapII | CCGG | 4 cut(s) | 315, 1323, 1421, 1442 |
| HhaI | GCGC | 2 cut(s) | 996, 1092 |
| Hin1II | CATG | 7 cut(s) | 232, 393, 577, 694, 1127, 1175, 1214 |
| Hin6I | GCGC | 2 cut(s) | 994, 1090 |
| HinP1I | GCGC | 2 cut(s) | 994, 1090 |
| HincII | GTYRAC | 4 cut(s) | 202, 280, 980, 1078 |
| HindII | GTYRAC | 4 cut(s) | 202, 280, 980, 1078 |
| HinfI | GANTC | 4 cut(s) | 18, 665, 833, 1337 |
| HpaII | CCGG | 4 cut(s) | 315, 1323, 1421, 1442 |
| HphI | GGTGA | 2 cut(s) | 49, 1226 |
| Hpy166II | GTNNAC | 7 cut(s) | 202, 280, 617, 637, 791, 980, 1078 |
| Hpy188I | TCNGA | 4 cut(s) | 382, 705, 1169, 1255 |
| Hpy188III | TCNNGA | 5 cut(s) | 356, 731, 1059, 1323, 1379 |
| Hpy8I | GTNNAC | 7 cut(s) | 202, 280, 617, 637, 791, 980, 1078 |
| HpyAV | CCTTC | 9 cut(s) | 96, 151, 343, 353, 769, 895, 899, 1021, 1080 |
| HpyCH4III | ACNGT | 3 cut(s) | 590, 1158, 1198 |
| HpyCH4IV | ACGT | 2 cut(s) | 537, 982 |
| HpyCH4V | TGCA | 9 cut(s) | 158, 327, 413, 546, 626, 647, 1161, 1188, 1289 |
| HpyF3I | CTNAG | 3 cut(s) | 266, 729, 1315 |
| HpySE526I | ACGT | 2 cut(s) | 537, 982 |
| Hsp92II | CATG | 7 cut(s) | 232, 393, 577, 694, 1127, 1175, 1214 |
| HspAI | GCGC | 2 cut(s) | 994, 1090 |
| Kpn2I | TCCGGA | 1 cut(s) | 1322 |
| Ksp22I | TGATCA | 2 cut(s) | 1261, 1348 |
| Kzo9I | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| LmnI | GCTCC | 1 cut(s) | 1325 |
| Lsp1109I | GCAGC | 3 cut(s) | 142, 1286, 1301 |
| LweI | GCATC | 2 cut(s) | 201, 568 |
| MaeI | CTAG | 4 cut(s) | 446, 612, 1271, 1389 |
| MaeII | ACGT | 2 cut(s) | 537, 982 |
| MaeIII | GTNAC | 2 cut(s) | 19, 317 |
| MalI | GATC | 9 cut(s) | 651, 702, 810, 936, 1108, 1145, 1263, 1350, 1430 |
| MboI | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| MfeI | CAATTG | 1 cut(s) | 1189 |
| MflI | RGATCY | 2 cut(s) | 934, 1106 |
| MlyI | GAGTC | 3 cut(s) | 27, 827, 1346 |
| MroI | TCCGGA | 1 cut(s) | 1322 |
| MseI | TTAA | 5 cut(s) | 249, 741, 749, 1425, 1453 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspA1I | CMGCKG | 3 cut(s) | 155, 270, 1277 |
| MspCI | CTTAAG | 1 cut(s) | 740 |
| MspI | CCGG | 4 cut(s) | 315, 1323, 1421, 1442 |
| MspR9I | CCNGG | 3 cut(s) | 1002, 1012, 1301 |
| MunI | CAATTG | 1 cut(s) | 1189 |
| Mva1269I | GAATGC | 1 cut(s) | 389 |
| MvaI | CCWGG | 3 cut(s) | 1002, 1012, 1301 |
| NcoI | CCATGG | 1 cut(s) | 389 |
| NdeII | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| NlaIII | CATG | 7 cut(s) | 232, 393, 577, 694, 1127, 1175, 1214 |
| NlaIV | GGNNCC | 3 cut(s) | 1009, 1108, 1321 |
| NmuCI | GTSAC | 2 cut(s) | 19, 317 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 517 |
| PctI | GAATGC | 1 cut(s) | 389 |
| PfeI | GAWTC | 1 cut(s) | 665 |
| PflFI | GACNNNGTC | 1 cut(s) | 692 |
| PinAI | ACCGGT | 1 cut(s) | 1420 |
| PkrI | GCNGC | 6 cut(s) | 157, 272, 313, 444, 1276, 1291 |
| PleI | GAGTC | 3 cut(s) | 26, 827, 1345 |
| PpsI | GAGTC | 3 cut(s) | 26, 827, 1345 |
| PpuMI | RGGWCCY | 1 cut(s) | 1007 |
| Psp5II | RGGWCCY | 1 cut(s) | 1007 |
| Psp6I | CCWGG | 3 cut(s) | 1000, 1010, 1299 |
| PspFI | CCCAGC | 1 cut(s) | 1135 |
| PspGI | CCWGG | 3 cut(s) | 1000, 1010, 1299 |
| PspN4I | GGNNCC | 3 cut(s) | 1009, 1108, 1321 |
| PspPI | GGNCC | 4 cut(s) | 733, 1007, 1175, 1267 |
| PspPPI | RGGWCCY | 1 cut(s) | 1007 |
| PstI | CTGCAG | 1 cut(s) | 649 |
| PsuI | RGATCY | 2 cut(s) | 934, 1106 |
| PsyI | GACNNNGTC | 1 cut(s) | 692 |
| RsaI | GTAC | 3 cut(s) | 456, 1195, 1369 |
| RsaNI | GTAC | 3 cut(s) | 455, 1194, 1368 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SalI | GTCGAC | 1 cut(s) | 278 |
| SaqAI | TTAA | 5 cut(s) | 249, 741, 749, 1425, 1453 |
| SatI | GCNGC | 6 cut(s) | 156, 271, 312, 443, 1275, 1290 |
| Sau3AI | GATC | 9 cut(s) | 649, 700, 808, 934, 1106, 1143, 1261, 1348, 1428 |
| Sau96I | GGNCC | 4 cut(s) | 733, 1007, 1175, 1267 |
| SchI | GAGTC | 3 cut(s) | 27, 827, 1346 |
| ScrFI | CCNGG | 3 cut(s) | 1002, 1012, 1301 |
| SfaNI | GCATC | 2 cut(s) | 201, 568 |
| SfcI | CTRYAG | 2 cut(s) | 645, 1154 |
| SinI | GGWCC | 2 cut(s) | 733, 1007 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| SmlI | CTYRAG | 2 cut(s) | 740, 837 |
| SmoI | CTYRAG | 2 cut(s) | 740, 837 |
| SsiI | CCGC | 8 cut(s) | 153, 270, 273, 298, 312, 330, 443, 1277 |
| SspI | AATATT | 2 cut(s) | 473, 753 |
| SspMI | CTAG | 4 cut(s) | 446, 612, 1271, 1389 |
| StyD4I | CCNGG | 3 cut(s) | 1000, 1010, 1299 |
| StyI | CCWWGG | 2 cut(s) | 389, 940 |
| TaaI | ACNGT | 3 cut(s) | 590, 1158, 1198 |
| TaiI | ACGT | 2 cut(s) | 540, 985 |
| TaqI | TCGA | 6 cut(s) | 16, 279, 511, 773, 952, 1180 |
| TaqII | GACCGA | 1 cut(s) | 965 |
| TatI | WGTACW | 2 cut(s) | 454, 1367 |
| TauI | GCSGC | 3 cut(s) | 273, 314, 445 |
| TfiI | GAWTC | 1 cut(s) | 665 |
| Tru1I | TTAA | 5 cut(s) | 249, 741, 749, 1425, 1453 |
| Tru9I | TTAA | 5 cut(s) | 249, 741, 749, 1425, 1453 |
| TscAI | CASTG | 3 cut(s) | 292, 877, 1163 |
| TseFI | GTSAC | 2 cut(s) | 19, 317 |
| TseI | GCWGC | 3 cut(s) | 155, 1274, 1289 |
| Tsp45I | GTSAC | 2 cut(s) | 19, 317 |
| TspDTI | ATGAA | 4 cut(s) | 17, 483, 562, 1242 |
| TspGWI | ACGGA | 1 cut(s) | 671 |
| TspRI | CASTG | 3 cut(s) | 292, 877, 1163 |
| Tth111I | GACNNNGTC | 1 cut(s) | 692 |
| Vha464I | CTTAAG | 1 cut(s) | 740 |
| VpaK11BI | GGWCC | 2 cut(s) | 733, 1007 |
| XapI | RAATTY | 5 cut(s) | 345, 560, 843, 875, 1433 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 589, 1008 |
| XmiI | GTMKAC | 1 cut(s) | 279 |
| XspI | CTAG | 4 cut(s) | 446, 612, 1271, 1389 |