Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0009292

Physical Location & Seq

Genomic Coordinates Forward (+)

28268437 .. 28274620

Gene Structure 6184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1196700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGGCTGTACGGCAATTGCTTCGCACCGTCTTATCTGGAAGCTCCTCCTCGTCATCCACTGTTACCGCCATTTCCTCCTCCCCTCCAAAACCAAAAACCCCAATTTCAAATCAGCACTTTTCCCCCAACCTCCACCTTCCGAAACGCTGTCGTTTACTGTATAATGTGTATGCTACGAAACCAATGGCGAGATTAATACCAATGGCCATGGCAGCCTCTCTATTCCCCCACATCACCTCCCACACTCTCGCTCTCAAACCCTATATCTGGCCTTTTCCTCGCTCTCCAACCCCGACAACTCTCCTCTTCCTCAGACCCTTCTCTCTCTCCGCCCGCTCCGTCAACTGCTTCTCGGTCCCCCAAACTCCGCGCGCTCCAAACAGCTTCAATGGAGATGTAGGCCCTTACTTGTCCTGTTCTATGCCCCATCAGAGCCTTAAAGTCGCCGTCTTGCTTAGCGGTGGCGTCGATAGCAGTGTCGCCCTCCGCCTCCTCCATGCCGCCGGTCACTCCTGCACCGCCTTCTACCTCAAAATTTGGTTCCAAGAAGACTTTGAGAACTATTGGTCAGAGTGCCCATGGGAAGAAGACTTGAAGTATGCAAAAGCTATCTGCAATCAGGTTGATGTCCCACTAGAAGTTGTGCATTTGACGGATGAATATTGGAAGAATGTGGTTTCCTACATTATTGAAGAGTATCAATGTGGCAGAACTCCTAACCCCGATATTCTTTGCAATACAAGAATAAAGTTTGGTGCATTCATGGACGCCATCAGCAGTATGAAGTTTGACTATGTGGCATCTGGGCATTACGCGAATGTTGTCCACCCACCTGCAAGTCAAACGGACAAAGATTCTGTTCTAGAACTCTCACAAGATATGGTGAAGGATCAAACATACTTCCTTTCAAATCTTTCTCAGGCCCAGCTTAGGAGATTAATATTCCCACTTGGTTGTCTGTCAAAGGATGAAGTTCGCAAACTTGCAACAAAGTTTGATCTGCCTAACAAAGACAGAAAGGATTCACAAGGAATATGCTTTCTAGGGAAGATCAAGTTCAGTGAATTTATAGCGAGACACATAGGGGAGAAGGAAGGTGTCATATTGGAAGCTGAGTCAGGAGATTTCCTAGGAAATCATCGGGGGTTTTGGTTCTACACAATTGGTCAACGACAAGGTCTACACCTCCCTGGAGGACCCTGGTATGCTGTCTTGTTGTATGTTGTCGAGAAGGATATAAAAAACAATGTCGTTTTTGTGTCAAGAAATTACTTTTCAGTTGACAAAAGAAGGCGCCTGTTTCGTGCAGGCTCCTTGAAATGGCTAAATGGTTTGTCCCCAAACCAGATCAGTCAGCTAGAGTGCAAGGTTAGGCATGGGCCTGCCTTTTGTAAGTGCAGCTTTATAATGGAACCTGGTGAAGATGGTCATGAAGATGTCGCAGTTGTCCACTTATCTCAAGATGATCAAGGCCTGGCAGCTGGGCAGTTTGCGGCCTTTTACCAAGGAAGAACCTGCTTGGGCTCCGGTGTAATTTTGGAGTCTTGGGATGATCAAGGTTTTCCAGTGTGTGCAAGAGCCCATGAAAATGCAAGAATGGAAGATAAATCACTTCTCGGTAAACCAGTTAAGATAAAAGTAAAGCCAGAGAGTCTTTTAACAGAGTCTGGTGAGGTAGATGGCGTGGAACTTTGTGGAGGACTGAAAAATCCTGGAATTGCTGCTACTAAACAACCAATGGCAACAACAGAGCAGCAGAAGCACACCAACTTTCAAACCCAAGACCAAGAGGTGTCATGCAGGAGCTGGGCAGTTTCAGATGAAGCGTATGGAATGGAAATAAAGGAAATTTCGAATCTGTTTCGATTTCATGCTCATCCTATTCGGAGGAATGTAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04072 map00561 map00564 map01100 map01110 map04072

Pfam Domains

Protein Families

tRNA_Me_trans

Protein Analysis

634

Amino Acids

70.91

Weight (kDa)

8.52

Isoelectric Point (pI)

46.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_Me_trans	PF03054	147 - 350	3.2e-78	tRNA methyl transferase HUP domain
tRNA_Me_trans_M	PF20259	355 - 422	2.5e-23	tRNA methyl transferase PRC-barrel domain
tRNA_Me_trans_C	PF20258	432 - 512	9.8e-17	Aminomethyltransferase beta-barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51310
fragaria_vesca	FvH4_5g33050 FvH4_5g33050 FvH4_5g33050
malus_domestica	MD03G1176400.v1.1 MD11G1196700.v1.1
prunus_persica	Prupe.5G028600_v2.0.a1 Prupe.5G028600_v2.0.a1
pyrus_communis	pycom03g13370 pycom11g16970
rosa_chinensis	RchiOBHm_Chr7g0231131
rosa_laevigata	RLG00000001432
rosa_multiflora	Rmu_co8502733.1_g000001 Rmu_sc0012403.1_g000009
rosa_roxburghii	Rroxscaffold_1G00030590 Rroxscaffold_5G00347570
rosa_rugosa	Rorug07G0264900
rosa_samantha	Rh7AG417700 Rh7BG393900 Rh7CG437700 Rh7DG411700
rosa_wichuraiana	Rw7G034590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1406
AarI	CACCTGC	1 cut(s)	841
Acc36I	ACCTGC	2 cut(s)	841, 1523
AccB1I	GGYRCC	1 cut(s)	1293
AccBSI	CCGCTC	1 cut(s)	336
AccI	GTMKAC	1 cut(s)	1180
AccII	CGCG	3 cut(s)	370, 372, 815
AciI	CCGC	9 cut(s)	66, 330, 334, 368, 459, 487, 501, 519, 1493
AclWI	GGATC	1 cut(s)	897
AcoI	YGGCCR	1 cut(s)	204
AcsI	RAATTY	3 cut(s)	534, 1064, 1848
AcyI	GRCGYC	3 cut(s)	465, 768, 1294
AfaI	GTAC	1 cut(s)	9
AfiI	CCNNNNNNNGG	3 cut(s)	267, 930, 1320
AgsI	TTSAA	7 cut(s)	108, 388, 595, 692, 909, 1318, 1775
AjnI	CCWGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
AluBI	AGCT	9 cut(s)	42, 384, 608, 928, 1112, 1357, 1401, 1481, 1806
AluI	AGCT	9 cut(s)	42, 384, 608, 928, 1112, 1357, 1401, 1481, 1806
Alw26I	GTCTC	1 cut(s)	1069
AlwI	GGATC	1 cut(s)	897
AlwNI	CAGNNNCTG	2 cut(s)	1667, 1806
AoxI	GGCC	7 cut(s)	204, 269, 400, 921, 1379, 1471, 1494
ApeKI	GCWGC	5 cut(s)	212, 1398, 1478, 1721, 1753
ApoI	RAATTY	3 cut(s)	534, 1064, 1848
AseI	ATTAAT	2 cut(s)	194, 938
Asp700I	GAANNNNTTC	1 cut(s)	1021
AspA2I	CCTAGG	1 cut(s)	1129
AspLEI	GCGC	3 cut(s)	372, 374, 1296
AspS9I	GGNCC	5 cut(s)	355, 401, 922, 1196, 1379
AsuHPI	GGTGA	4 cut(s)	226, 895, 1430, 1682
AsuII	TTCGAA	1 cut(s)	1853
AvaII	GGWCC	2 cut(s)	355, 1196
AvrII	CCTAGG	1 cut(s)	1129
BaeGI	GKGCMC	1 cut(s)	578
BalI	TGGCCA	1 cut(s)	206
BanI	GGYRCC	1 cut(s)	1293
BanII	GRGCYC	2 cut(s)	1526, 1582
BbsI	GAAGAC	2 cut(s)	555, 594
BbvI	GCAGC	5 cut(s)	224, 1410, 1490, 1708, 1765
BccI	CCATC	4 cut(s)	435, 779, 1418, 1673
BceAI	ACGGC	2 cut(s)	26, 431
BcgI	CGANNNNNNTGC	1 cut(s)	36
BciT130I	CCWGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
BclI	TGATCA	2 cut(s)	1465, 1552
BcoDI	GTCTC	1 cut(s)	1069
BfaI	CTAG	5 cut(s)	635, 863, 1043, 1130, 1358
BfoI	RGCGCY	1 cut(s)	1297
BfuAI	ACCTGC	2 cut(s)	841, 1523
BisI	GCNGC	7 cut(s)	213, 501, 1399, 1479, 1494, 1722, 1754
BlnI	CCTAGG	1 cut(s)	1129
BlpI	GCTNAGC	1 cut(s)	455
BlsI	GCNGC	7 cut(s)	214, 502, 1400, 1480, 1495, 1723, 1755
Bme1390I	CCNGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
Bme18I	GGWCC	2 cut(s)	355, 1196
BmgT120I	GGNCC	5 cut(s)	355, 401, 922, 1196, 1379
BmiI	GGNNCC	7 cut(s)	357, 542, 1198, 1295, 1312, 1413, 1525
BmrFI	CCNGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
BmsI	GCATC	1 cut(s)	809
BpiI	GAAGAC	2 cut(s)	555, 594
BpmI	CTGGAG	1 cut(s)	1212
Bpu10I	CCTNAGC	1 cut(s)	929
Bpu1102I	GCTNAGC	1 cut(s)	455
Bpu14I	TTCGAA	1 cut(s)	1853
BpuEI	CTTGAG	1 cut(s)	1443
BsaHI	GRCGYC	3 cut(s)	465, 768, 1294
BsaJI	CCNNGG	6 cut(s)	207, 578, 1129, 1189, 1199, 1504
BsaWI	WCCGGW	1 cut(s)	1526
BsaXI	ACNNNNNCTCC	2 cut(s)	221, 251
Bsc4I	CCNNNNNNNGG	3 cut(s)	267, 930, 1320
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	2 cut(s)	1565, 1625
BseBI	CCWGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
BseDI	CCNNGG	6 cut(s)	207, 578, 1129, 1189, 1199, 1504
BseGI	GGATG	5 cut(s)	53, 661, 973, 1555, 1876
BseLI	CCNNNNNNNGG	3 cut(s)	267, 930, 1320
BseMII	CTCAG	3 cut(s)	325, 932, 1104
BseNI	ACTGG	2 cut(s)	1565, 1625
BsePI	GCGCGC	1 cut(s)	370
BseRI	GAGGAG	5 cut(s)	34, 37, 67, 293, 482
BseSI	GKGCMC	1 cut(s)	578
BseXI	GCAGC	5 cut(s)	224, 1410, 1490, 1708, 1765
BseYI	CCCAGC	3 cut(s)	924, 1481, 1806
BsgI	GTGCAG	3 cut(s)	499, 1326, 1417
Bsh1236I	CGCG	3 cut(s)	370, 372, 815
BshFI	GGCC	7 cut(s)	206, 271, 402, 923, 1381, 1473, 1496
BshNI	GGYRCC	1 cut(s)	1293
BsiSI	CCGG	2 cut(s)	504, 1527
BslFI	GGGAC	3 cut(s)	341, 614, 1321
BslI	CCNNNNNNNGG	3 cut(s)	267, 930, 1320
BsmAI	GTCTC	1 cut(s)	1069
BsmFI	GGGAC	3 cut(s)	341, 614, 1321
BsmI	GAATGC	1 cut(s)	758
BsnI	GGCC	7 cut(s)	206, 271, 402, 923, 1381, 1473, 1496
Bsp119I	TTCGAA	1 cut(s)	1853
Bsp1286I	GDGCHC	3 cut(s)	578, 1526, 1582
Bsp143I	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
Bsp1720I	GCTNAGC	1 cut(s)	455
Bsp19I	CCATGG	2 cut(s)	207, 578
BspACI	CCGC	9 cut(s)	66, 330, 334, 368, 459, 487, 501, 519, 1493
BspANI	GGCC	7 cut(s)	206, 271, 402, 923, 1381, 1473, 1496
BspCNI	CTCAG	3 cut(s)	324, 931, 1105
BspFNI	CGCG	3 cut(s)	370, 372, 815
BspHI	TCATGA	1 cut(s)	1429
BspLI	GGNNCC	7 cut(s)	357, 542, 1198, 1295, 1312, 1413, 1525
BspMI	ACCTGC	2 cut(s)	841, 1523
BspPI	GGATC	1 cut(s)	897
BspT104I	TTCGAA	1 cut(s)	1853
BspT107I	GGYRCC	1 cut(s)	1293
BsrBI	CCGCTC	1 cut(s)	336
BsrFI	RCCGGY	1 cut(s)	503
BsrI	ACTGG	2 cut(s)	1565, 1625
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	6 cut(s)	207, 578, 1129, 1189, 1199, 1504
BssHII	GCGCGC	1 cut(s)	370
BssMI	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
BssNI	GRCGYC	3 cut(s)	465, 768, 1294
BssT1I	CCWWGG	4 cut(s)	207, 578, 1129, 1504
Bst2UI	CCWGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
Bst4CI	ACNGT	3 cut(s)	28, 61, 159
Bst6I	CTCTTC	2 cut(s)	311, 687
BstACI	GRCGYC	3 cut(s)	465, 768, 1294
BstBI	TTCGAA	1 cut(s)	1853
BstC8I	GCNNGC	4 cut(s)	334, 372, 1309, 1383
BstDEI	CTNAG	5 cut(s)	311, 455, 918, 929, 1113
BstDSI	CCRYGG	2 cut(s)	207, 578
BstF5I	GGATG	5 cut(s)	53, 661, 973, 1555, 1876
BstFNI	CGCG	3 cut(s)	370, 372, 815
BstH2I	RGCGCY	1 cut(s)	1297
BstHHI	GCGC	3 cut(s)	372, 374, 1296
BstKTI	GATC	6 cut(s)	892, 1000, 1053, 1350, 1468, 1555
BstMAI	GTCTC	1 cut(s)	1069
BstMBI	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 471, 1759
BstNI	CCWGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
BstSCI	CCNGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
BstSLI	GKGCMC	1 cut(s)	578
BstUI	CGCG	3 cut(s)	370, 372, 815
BstV1I	GCAGC	5 cut(s)	224, 1410, 1490, 1708, 1765
BstV2I	GAAGAC	2 cut(s)	555, 594
BsuRI	GGCC	7 cut(s)	206, 271, 402, 923, 1381, 1473, 1496
BtgI	CCRYGG	2 cut(s)	207, 578
BtsCI	GGATG	5 cut(s)	53, 661, 973, 1555, 1876
BtsI	GCAGTG	1 cut(s)	481
BtsIMutI	CAGTG	4 cut(s)	57, 481, 1066, 1572
BveI	ACCTGC	2 cut(s)	841, 1523
Cac8I	GCNNGC	4 cut(s)	334, 372, 1309, 1383
CaiI	CAGNNNCTG	2 cut(s)	1667, 1806
CciI	TCATGA	1 cut(s)	1429
CfoI	GCGC	3 cut(s)	372, 374, 1296
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	5 cut(s)	355, 401, 922, 1196, 1379
CseI	GACGC	2 cut(s)	454, 776
CsiI	ACCWGGT	1 cut(s)	1414
Csp6I	GTAC	1 cut(s)	8
CviAII	CATG	9 cut(s)	208, 497, 579, 763, 1376, 1430, 1583, 1797, 1871
CviQI	GTAC	1 cut(s)	8
DdeI	CTNAG	5 cut(s)	311, 455, 918, 929, 1113
DinI	GGCGCC	1 cut(s)	1295
DpnI	GATC	6 cut(s)	891, 999, 1052, 1349, 1467, 1554
DpnII	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
EaeI	YGGCCR	1 cut(s)	204
Eam1104I	CTCTTC	2 cut(s)	311, 687
EarI	CTCTTC	2 cut(s)	311, 687
EciI	GGCGGA	2 cut(s)	319, 476
Eco130I	CCWWGG	4 cut(s)	207, 578, 1129, 1504
Eco147I	AGGCCT	1 cut(s)	1473
Eco24I	GRGCYC	2 cut(s)	1526, 1582
Eco47I	GGWCC	2 cut(s)	355, 1196
EcoO109I	RGGNCCY	2 cut(s)	401, 1196
EcoRII	CCWGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
EcoT14I	CCWWGG	4 cut(s)	207, 578, 1129, 1504
EcoT38I	GRGCYC	2 cut(s)	1526, 1582
EgeI	GGCGCC	1 cut(s)	1295
EheI	GGCGCC	1 cut(s)	1295
ErhI	CCWWGG	4 cut(s)	207, 578, 1129, 1504
FaeI	CATG	9 cut(s)	211, 500, 582, 766, 1379, 1433, 1586, 1800, 1874
FalI	AAGNNNNNCTT	2 cut(s)	1385, 1417
FaqI	GGGAC	3 cut(s)	341, 614, 1321
FatI	CATG	9 cut(s)	207, 496, 578, 762, 1375, 1429, 1582, 1796, 1870
FauI	CCCGC	1 cut(s)	341
FbaI	TGATCA	2 cut(s)	1465, 1552
FblI	GTMKAC	1 cut(s)	1180
Fnu4HI	GCNGC	7 cut(s)	213, 501, 1399, 1479, 1494, 1722, 1754
FokI	GGATG	5 cut(s)	40, 668, 980, 1562, 1863
FriOI	GRGCYC	2 cut(s)	1526, 1582
Fsp4HI	GCNGC	7 cut(s)	213, 501, 1399, 1479, 1494, 1722, 1754
FspBI	CTAG	5 cut(s)	635, 863, 1043, 1130, 1358
GlaI	GCGC	3 cut(s)	371, 373, 1295
GluI	GCNGC	7 cut(s)	213, 501, 1399, 1479, 1494, 1722, 1754
GsaI	CCCAGC	3 cut(s)	928, 1485, 1810
GsuI	CTGGAG	1 cut(s)	1212
HaeII	RGCGCY	1 cut(s)	1297
HaeIII	GGCC	7 cut(s)	206, 271, 402, 923, 1381, 1473, 1496
HapII	CCGG	2 cut(s)	504, 1527
HgaI	GACGC	2 cut(s)	454, 776
HhaI	GCGC	3 cut(s)	372, 374, 1296
Hin1I	GRCGYC	3 cut(s)	465, 768, 1294
Hin1II	CATG	9 cut(s)	211, 500, 582, 766, 1379, 1433, 1586, 1800, 1874
Hin6I	GCGC	3 cut(s)	370, 372, 1294
HinP1I	GCGC	3 cut(s)	370, 372, 1294
HincII	GTYRAC	3 cut(s)	343, 1169, 1282
HindII	GTYRAC	3 cut(s)	343, 1169, 1282
HinfI	GANTC	7 cut(s)	854, 1022, 1115, 1541, 1651, 1664, 1855
HpaII	CCGG	2 cut(s)	504, 1527
HphI	GGTGA	4 cut(s)	226, 895, 1430, 1682
Hpy166II	GTNNAC	8 cut(s)	155, 343, 826, 1169, 1181, 1282, 1450, 1622
Hpy188I	TCNGA	6 cut(s)	141, 314, 432, 571, 1819, 1887
Hpy188III	TCNNGA	7 cut(s)	36, 863, 1119, 1228, 1263, 1430, 1460
Hpy8I	GTNNAC	8 cut(s)	155, 343, 826, 1169, 1181, 1282, 1450, 1622
Hpy99I	CGWCG	1 cut(s)	470
HpyAV	CCTTC	8 cut(s)	146, 328, 532, 880, 1084, 1088, 1225, 1284
HpyCH4III	ACNGT	3 cut(s)	28, 61, 159
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 471, 1759
HpyF3I	CTNAG	5 cut(s)	311, 455, 918, 929, 1113
Hsp92I	GRCGYC	3 cut(s)	465, 768, 1294
Hsp92II	CATG	9 cut(s)	211, 500, 582, 766, 1379, 1433, 1586, 1800, 1874
HspAI	GCGC	3 cut(s)	370, 372, 1294
KasI	GGCGCC	1 cut(s)	1293
Ksp22I	TGATCA	2 cut(s)	1465, 1552
Kzo9I	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
LmnI	GCTCC	6 cut(s)	47, 341, 379, 1316, 1529, 1803
Lsp1109I	GCAGC	5 cut(s)	224, 1410, 1490, 1708, 1765
LweI	GCATC	1 cut(s)	809
MabI	ACCWGGT	1 cut(s)	1414
MaeI	CTAG	5 cut(s)	635, 863, 1043, 1130, 1358
MaeIII	GTNAC	2 cut(s)	61, 506
MalI	GATC	6 cut(s)	891, 999, 1052, 1349, 1467, 1554
MbiI	CCGCTC	1 cut(s)	336
MboI	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
MfeI	CAATTG	2 cut(s)	14, 1161
MhlI	GDGCHC	3 cut(s)	578, 1526, 1582
MlsI	TGGCCA	1 cut(s)	206
MluCI	AATT	9 cut(s)	14, 102, 534, 1064, 1161, 1267, 1533, 1716, 1848
MluNI	TGGCCA	1 cut(s)	206
Mly113I	GGCGCC	1 cut(s)	1294
MlyI	GAGTC	4 cut(s)	1124, 1550, 1660, 1673
MmeI	TCCRAC	1 cut(s)	311
Mox20I	TGGCCA	1 cut(s)	206
MroXI	GAANNNNTTC	1 cut(s)	1021
MscI	TGGCCA	1 cut(s)	206
MseI	TTAA	5 cut(s)	194, 438, 938, 1629, 1658
MslI	CAYNNNNRTG	2 cut(s)	1434, 1587
Msp20I	TGGCCA	1 cut(s)	206
MspA1I	CMGCKG	1 cut(s)	1481
MspI	CCGG	2 cut(s)	504, 1527
MspR9I	CCNGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
MunI	CAATTG	2 cut(s)	14, 1161
Mva1269I	GAATGC	1 cut(s)	758
MvaI	CCWGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
MvnI	CGCG	3 cut(s)	370, 372, 815
MwoI	GCNNNNNNNGC	3 cut(s)	212, 471, 1759
NarI	GGCGCC	1 cut(s)	1294
NcoI	CCATGG	2 cut(s)	207, 578
NdeII	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
NlaIII	CATG	9 cut(s)	211, 500, 582, 766, 1379, 1433, 1586, 1800, 1874
NlaIV	GGNNCC	7 cut(s)	357, 542, 1198, 1295, 1312, 1413, 1525
NmuCI	GTSAC	1 cut(s)	506
NspV	TTCGAA	1 cut(s)	1853
PagI	TCATGA	1 cut(s)	1429
PaqCI	CACCTGC	1 cut(s)	841
PauI	GCGCGC	1 cut(s)	370
PceI	AGGCCT	1 cut(s)	1473
PctI	GAATGC	1 cut(s)	758
PdmI	GAANNNNTTC	1 cut(s)	1021
PfeI	GAWTC	3 cut(s)	854, 1022, 1855
PflFI	GACNNNGTC	1 cut(s)	1176
PfoI	TCCNGGA	1 cut(s)	1711
PkrI	GCNGC	7 cut(s)	214, 502, 1400, 1480, 1495, 1723, 1755
PleI	GAGTC	4 cut(s)	1123, 1549, 1659, 1672
PluTI	GGCGCC	1 cut(s)	1297
PpsI	GAGTC	4 cut(s)	1123, 1549, 1659, 1672
PpuMI	RGGWCCY	1 cut(s)	1196
PshBI	ATTAAT	2 cut(s)	194, 938
PsiI	TTATAA	1 cut(s)	1406
Psp5II	RGGWCCY	1 cut(s)	1196
Psp6I	CCWGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
PspFI	CCCAGC	3 cut(s)	924, 1481, 1806
PspGI	CCWGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
PspN4I	GGNNCC	7 cut(s)	357, 542, 1198, 1295, 1312, 1413, 1525
PspPI	GGNCC	5 cut(s)	355, 401, 922, 1196, 1379
PspPPI	RGGWCCY	1 cut(s)	1196
PstNI	CAGNNNCTG	2 cut(s)	1667, 1806
PsyI	GACNNNGTC	1 cut(s)	1176
PteI	GCGCGC	1 cut(s)	370
PvuII	CAGCTG	1 cut(s)	1481
RsaI	GTAC	1 cut(s)	9
RsaNI	GTAC	1 cut(s)	8
RseI	CAYNNNNRTG	2 cut(s)	1434, 1587
SaqAI	TTAA	5 cut(s)	194, 438, 938, 1629, 1658
SatI	GCNGC	7 cut(s)	213, 501, 1399, 1479, 1494, 1722, 1754
Sau3AI	GATC	6 cut(s)	889, 997, 1050, 1347, 1465, 1552
Sau96I	GGNCC	5 cut(s)	355, 401, 922, 1196, 1379
SchI	GAGTC	4 cut(s)	1124, 1550, 1660, 1673
ScrFI	CCNGG	5 cut(s)	1191, 1201, 1416, 1475, 1713
SduI	GDGCHC	3 cut(s)	578, 1526, 1582
SexAI	ACCWGGT	1 cut(s)	1414
SfaNI	GCATC	1 cut(s)	809
SfoI	GGCGCC	1 cut(s)	1295
SfuI	TTCGAA	1 cut(s)	1853
SinI	GGWCC	2 cut(s)	355, 1196
SmiMI	CAYNNNNRTG	2 cut(s)	1434, 1587
SmlI	CTYRAG	1 cut(s)	1458
SmoI	CTYRAG	1 cut(s)	1458
Sse9I	AATT	9 cut(s)	14, 102, 534, 1064, 1161, 1267, 1533, 1716, 1848
SseBI	AGGCCT	1 cut(s)	1473
SsiI	CCGC	9 cut(s)	66, 330, 334, 368, 459, 487, 501, 519, 1493
SspDI	GGCGCC	1 cut(s)	1293
SspI	AATATT	2 cut(s)	662, 942
SspMI	CTAG	5 cut(s)	635, 863, 1043, 1130, 1358
StuI	AGGCCT	1 cut(s)	1473
StyD4I	CCNGG	5 cut(s)	1189, 1199, 1414, 1473, 1711
StyI	CCWWGG	4 cut(s)	207, 578, 1129, 1504
TaaI	ACNGT	3 cut(s)	28, 61, 159
TaqI	TCGA	4 cut(s)	468, 1227, 1853, 1864
TaqII	GACCGA	1 cut(s)	343
TasI	AATT	9 cut(s)	14, 102, 534, 1064, 1161, 1267, 1533, 1716, 1848
TauI	GCSGC	2 cut(s)	503, 1496
TfiI	GAWTC	3 cut(s)	854, 1022, 1855
Tru1I	TTAA	5 cut(s)	194, 438, 938, 1629, 1658
Tru9I	TTAA	5 cut(s)	194, 438, 938, 1629, 1658
TscAI	CASTG	4 cut(s)	64, 481, 1066, 1572
TseFI	GTSAC	1 cut(s)	506
TseI	GCWGC	5 cut(s)	212, 1398, 1478, 1721, 1753
Tsp45I	GTSAC	1 cut(s)	506
TspDTI	ATGAA	8 cut(s)	672, 751, 797, 984, 1446, 1599, 1836, 1859
TspGWI	ACGGA	3 cut(s)	328, 668, 860
TspRI	CASTG	4 cut(s)	64, 481, 1066, 1572
Tth111I	GACNNNGTC	1 cut(s)	1176
VpaK11BI	GGWCC	2 cut(s)	355, 1196
VspI	ATTAAT	2 cut(s)	194, 938
XapI	RAATTY	3 cut(s)	534, 1064, 1848
XbaI	TCTAGA	1 cut(s)	862
XmaJI	CCTAGG	1 cut(s)	1129
XmiI	GTMKAC	1 cut(s)	1180
XmnI	GAANNNNTTC	1 cut(s)	1021
XspI	CTAG	5 cut(s)	635, 863, 1043, 1130, 1358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.