GATA transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24470 AT4G24470 AT4G24470 |
| fragaria_vesca | FvH4_5g34500 FvH4_5g34500 |
| malus_domestica | MD08G1200800.v1.1 MD15G1387700.v1.1 |
| prunus_persica | Prupe.1G534300_v2.0.a1 |
| pyrus_communis | pycom08g17440 pycom15g34800 |
| rosa_chinensis | RchiOBHm_Chr7g0235141 |
| rosa_laevigata | RLG00000001179 |
| rosa_multiflora | Rmu_sc0002239.1_g000022 Rmu_sc0007762.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00226250 |
| rosa_rugosa | Rorug07G0288200.1 Rorug07G0288300 |
| rosa_samantha | Rh7AG442900 Rh7BG415600 Rh7CG463800 Rh7DG432600 |
| rosa_wichuraiana | Rw7G036820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 131, 747 |
| AccB1I | GGYRCC | 2 cut(s) | 47, 71 |
| AccI | GTMKAC | 1 cut(s) | 252 |
| AccII | CGCG | 2 cut(s) | 65, 243 |
| AciI | CCGC | 7 cut(s) | 39, 45, 129, 177, 243, 652, 693 |
| AclWI | GGATC | 1 cut(s) | 28 |
| AcoI | YGGCCR | 2 cut(s) | 7, 244 |
| AcuI | CTGAAG | 1 cut(s) | 804 |
| AcyI | GRCGYC | 2 cut(s) | 72, 132 |
| AfaI | GTAC | 4 cut(s) | 5, 167, 394, 822 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 44, 196, 212, 280 |
| AflIII | ACRYGT | 1 cut(s) | 162 |
| AgsI | TTSAA | 3 cut(s) | 173, 287, 633 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AleI | CACNNNNGTG | 1 cut(s) | 828 |
| AluBI | AGCT | 5 cut(s) | 226, 290, 558, 764, 788 |
| AluI | AGCT | 5 cut(s) | 226, 290, 558, 764, 788 |
| Alw21I | GWGCWC | 1 cut(s) | 641 |
| Alw26I | GTCTC | 2 cut(s) | 681, 733 |
| Alw44I | GTGCAC | 1 cut(s) | 637 |
| AlwI | GGATC | 1 cut(s) | 28 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 803 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 6 cut(s) | 7, 109, 147, 244, 366, 568 |
| ApaLI | GTGCAC | 1 cut(s) | 637 |
| ApeKI | GCWGC | 3 cut(s) | 410, 505, 761 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 282, 628 |
| AspLEI | GCGC | 2 cut(s) | 67, 74 |
| AspS9I | GGNCC | 4 cut(s) | 366, 569, 659, 668 |
| AsuC2I | CCSGG | 1 cut(s) | 69 |
| AsuHPI | GGTGA | 3 cut(s) | 353, 788, 869 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| AvaII | GGWCC | 2 cut(s) | 659, 668 |
| BaeGI | GKGCMC | 1 cut(s) | 641 |
| BanI | GGYRCC | 2 cut(s) | 47, 71 |
| BanII | GRGCYC | 3 cut(s) | 218, 314, 699 |
| Bbv12I | GWGCWC | 1 cut(s) | 641 |
| BbvI | GCAGC | 3 cut(s) | 422, 517, 773 |
| BccI | CCATC | 3 cut(s) | 89, 539, 670 |
| BceAI | ACGGC | 2 cut(s) | 22, 142 |
| BcnI | CCSGG | 1 cut(s) | 69 |
| BcoDI | GTCTC | 2 cut(s) | 681, 733 |
| BfaI | CTAG | 1 cut(s) | 305 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BisI | GCNGC | 6 cut(s) | 130, 244, 411, 506, 653, 762 |
| BlsI | GCNGC | 6 cut(s) | 131, 245, 412, 507, 654, 763 |
| Bme1390I | CCNGG | 1 cut(s) | 69 |
| Bme18I | GGWCC | 2 cut(s) | 659, 668 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 4 cut(s) | 366, 569, 659, 668 |
| BmiI | GGNNCC | 4 cut(s) | 49, 73, 217, 428 |
| BmrFI | CCNGG | 1 cut(s) | 69 |
| BmsI | GCATC | 2 cut(s) | 492, 639 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 137, 169 |
| BpmI | CTGGAG | 2 cut(s) | 202, 786 |
| BpuMI | CCSGG | 1 cut(s) | 69 |
| BsaHI | GRCGYC | 2 cut(s) | 72, 132 |
| BsaI | GGTCTC | 2 cut(s) | 681, 733 |
| BsaJI | CCNNGG | 1 cut(s) | 671 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 200, 230 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 44, 196, 212, 280 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 2 cut(s) | 219, 808 |
| Bse3DI | GCAATG | 3 cut(s) | 357, 691, 819 |
| BseDI | CCNNGG | 1 cut(s) | 671 |
| BseGI | GGATG | 1 cut(s) | 507 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 44, 196, 212, 280 |
| BseMI | GCAATG | 3 cut(s) | 357, 691, 819 |
| BseMII | CTCAG | 3 cut(s) | 410, 511, 810 |
| BseNI | ACTGG | 2 cut(s) | 219, 808 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 1 cut(s) | 641 |
| BseXI | GCAGC | 3 cut(s) | 422, 517, 773 |
| BseYI | CCCAGC | 1 cut(s) | 558 |
| Bsh1236I | CGCG | 2 cut(s) | 65, 243 |
| BshFI | GGCC | 6 cut(s) | 9, 111, 149, 246, 368, 570 |
| BshNI | GGYRCC | 2 cut(s) | 47, 71 |
| BsiHKAI | GWGCWC | 1 cut(s) | 641 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsiSI | CCGG | 3 cut(s) | 42, 69, 383 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 44, 196, 212, 280 |
| BsmAI | GTCTC | 2 cut(s) | 681, 733 |
| BsnI | GGCC | 6 cut(s) | 9, 111, 149, 246, 368, 570 |
| Bso31I | GGTCTC | 2 cut(s) | 681, 733 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 4 cut(s) | 218, 314, 641, 699 |
| Bsp1407I | TGTACA | 2 cut(s) | 165, 820 |
| Bsp143I | GATC | 1 cut(s) | 33 |
| BspACI | CCGC | 7 cut(s) | 39, 45, 129, 177, 243, 652, 693 |
| BspANI | GGCC | 6 cut(s) | 9, 111, 149, 246, 368, 570 |
| BspCNI | CTCAG | 3 cut(s) | 409, 510, 809 |
| BspFNI | CGCG | 2 cut(s) | 65, 243 |
| BspLI | GGNNCC | 4 cut(s) | 49, 73, 217, 428 |
| BspPI | GGATC | 1 cut(s) | 28 |
| BspQI | GCTCTTC | 1 cut(s) | 704 |
| BspT107I | GGYRCC | 2 cut(s) | 47, 71 |
| BspTNI | GGTCTC | 2 cut(s) | 681, 733 |
| BsrDI | GCAATG | 3 cut(s) | 357, 691, 819 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrGI | TGTACA | 2 cut(s) | 165, 820 |
| BsrI | ACTGG | 2 cut(s) | 219, 808 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 1 cut(s) | 671 |
| BssMI | GATC | 1 cut(s) | 33 |
| BssNI | GRCGYC | 2 cut(s) | 72, 132 |
| BssT1I | CCWWGG | 1 cut(s) | 671 |
| Bst4CI | ACNGT | 2 cut(s) | 476, 827 |
| Bst6I | CTCTTC | 1 cut(s) | 704 |
| BstACI | GRCGYC | 2 cut(s) | 72, 132 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 690 |
| BstAUI | TGTACA | 2 cut(s) | 165, 820 |
| BstC8I | GCNNGC | 6 cut(s) | 43, 388, 614, 641, 691, 695 |
| BstDEI | CTNAG | 4 cut(s) | 396, 497, 796, 885 |
| BstF5I | GGATG | 1 cut(s) | 507 |
| BstFNI | CGCG | 2 cut(s) | 65, 243 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 2 cut(s) | 67, 74 |
| BstKTI | GATC | 1 cut(s) | 36 |
| BstMAI | GTCTC | 2 cut(s) | 681, 733 |
| BstMBI | GATC | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 47, 71, 301, 649, 690, 875 |
| BstSCI | CCNGG | 1 cut(s) | 67 |
| BstSLI | GKGCMC | 1 cut(s) | 641 |
| BstUI | CGCG | 2 cut(s) | 65, 243 |
| BstV1I | GCAGC | 3 cut(s) | 422, 517, 773 |
| BstX2I | RGATCY | 1 cut(s) | 33 |
| BstYI | RGATCY | 1 cut(s) | 33 |
| BsuRI | GGCC | 6 cut(s) | 9, 111, 149, 246, 368, 570 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 1 cut(s) | 507 |
| BtsIMutI | CAGTG | 2 cut(s) | 481, 801 |
| Cac8I | GCNNGC | 6 cut(s) | 43, 388, 614, 641, 691, 695 |
| CaiI | CAGNNNCTG | 1 cut(s) | 803 |
| CfoI | GCGC | 2 cut(s) | 67, 74 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 4 cut(s) | 366, 569, 659, 668 |
| CseI | GACGC | 3 cut(s) | 71, 121, 402 |
| Csp6I | GTAC | 4 cut(s) | 4, 166, 393, 821 |
| CviAII | CATG | 4 cut(s) | 22, 196, 346, 609 |
| CviQI | GTAC | 4 cut(s) | 4, 166, 393, 821 |
| DdeI | CTNAG | 4 cut(s) | 396, 497, 796, 885 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DpnI | GATC | 1 cut(s) | 35 |
| DpnII | GATC | 1 cut(s) | 33 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 131, 747 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 131, 747 |
| EaeI | YGGCCR | 2 cut(s) | 7, 244 |
| Eam1104I | CTCTTC | 1 cut(s) | 704 |
| EarI | CTCTTC | 1 cut(s) | 704 |
| EciI | GGCGGA | 1 cut(s) | 192 |
| Eco130I | CCWWGG | 1 cut(s) | 671 |
| Eco24I | GRGCYC | 3 cut(s) | 218, 314, 699 |
| Eco31I | GGTCTC | 2 cut(s) | 681, 733 |
| Eco47I | GGWCC | 2 cut(s) | 659, 668 |
| Eco57I | CTGAAG | 1 cut(s) | 804 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoT14I | CCWWGG | 1 cut(s) | 671 |
| EcoT38I | GRGCYC | 3 cut(s) | 218, 314, 699 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 1 cut(s) | 671 |
| FaeI | CATG | 4 cut(s) | 25, 199, 349, 612 |
| FaiI | YATR | 6 cut(s) | 23, 197, 347, 371, 405, 610 |
| FatI | CATG | 4 cut(s) | 21, 195, 345, 608 |
| FauI | CCCGC | 2 cut(s) | 46, 686 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 6 cut(s) | 130, 244, 411, 506, 653, 762 |
| FokI | GGATG | 1 cut(s) | 514 |
| FriOI | GRGCYC | 3 cut(s) | 218, 314, 699 |
| Fsp4HI | GCNGC | 6 cut(s) | 130, 244, 411, 506, 653, 762 |
| FspBI | CTAG | 1 cut(s) | 305 |
| GlaI | GCGC | 2 cut(s) | 66, 73 |
| GluI | GCNGC | 6 cut(s) | 130, 244, 411, 506, 653, 762 |
| GsaI | CCCAGC | 1 cut(s) | 562 |
| GsuI | CTGGAG | 2 cut(s) | 202, 786 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 6 cut(s) | 9, 111, 149, 246, 368, 570 |
| HapII | CCGG | 3 cut(s) | 42, 69, 383 |
| HgaI | GACGC | 3 cut(s) | 71, 121, 402 |
| HhaI | GCGC | 2 cut(s) | 67, 74 |
| Hin1I | GRCGYC | 2 cut(s) | 72, 132 |
| Hin1II | CATG | 4 cut(s) | 25, 199, 349, 612 |
| Hin6I | GCGC | 2 cut(s) | 65, 72 |
| HinP1I | GCGC | 2 cut(s) | 65, 72 |
| HinfI | GANTC | 6 cut(s) | 28, 77, 263, 317, 575, 794 |
| HpaII | CCGG | 3 cut(s) | 42, 69, 383 |
| HphI | GGTGA | 3 cut(s) | 353, 788, 869 |
| Hpy166II | GTNNAC | 4 cut(s) | 166, 253, 639, 823 |
| Hpy188I | TCNGA | 6 cut(s) | 33, 157, 316, 470, 544, 799 |
| Hpy188III | TCNNGA | 2 cut(s) | 485, 499 |
| Hpy8I | GTNNAC | 4 cut(s) | 166, 253, 639, 823 |
| Hpy99I | CGWCG | 7 cut(s) | 59, 62, 65, 137, 140, 143, 418 |
| HpyAV | CCTTC | 1 cut(s) | 101 |
| HpyCH4III | ACNGT | 2 cut(s) | 476, 827 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 255 |
| HpyCH4V | TGCA | 9 cut(s) | 25, 355, 494, 505, 599, 612, 639, 684, 833 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 47, 71, 301, 649, 690, 875 |
| HpyF3I | CTNAG | 4 cut(s) | 396, 497, 796, 885 |
| HpySE526I | ACGT | 2 cut(s) | 162, 255 |
| Hsp92I | GRCGYC | 2 cut(s) | 72, 132 |
| Hsp92II | CATG | 4 cut(s) | 25, 199, 349, 612 |
| HspAI | GCGC | 2 cut(s) | 65, 72 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| KroI | GCCGGC | 1 cut(s) | 41 |
| KroNI | GCCGGC | 1 cut(s) | 43 |
| Kzo9I | GATC | 1 cut(s) | 33 |
| LguI | GCTCTTC | 1 cut(s) | 704 |
| LmnI | GCTCC | 1 cut(s) | 221 |
| Lsp1109I | GCAGC | 3 cut(s) | 422, 517, 773 |
| LweI | GCATC | 2 cut(s) | 492, 639 |
| MaeI | CTAG | 1 cut(s) | 305 |
| MaeII | ACGT | 2 cut(s) | 162, 255 |
| MaeIII | GTNAC | 3 cut(s) | 268, 341, 509 |
| MalI | GATC | 1 cut(s) | 35 |
| MboI | GATC | 1 cut(s) | 33 |
| MboII | GAAGA | 3 cut(s) | 315, 522, 691 |
| MflI | RGATCY | 1 cut(s) | 33 |
| MhlI | GDGCHC | 4 cut(s) | 218, 314, 641, 699 |
| MluCI | AATT | 1 cut(s) | 521 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 4 cut(s) | 86, 257, 584, 788 |
| MreI | CGCCGGCG | 1 cut(s) | 41 |
| MroNI | GCCGGC | 1 cut(s) | 41 |
| MroXI | GAANNNNTTC | 2 cut(s) | 282, 628 |
| MseI | TTAA | 1 cut(s) | 419 |
| MslI | CAYNNNNRTG | 4 cut(s) | 350, 644, 806, 828 |
| MspA1I | CMGCKG | 2 cut(s) | 558, 764 |
| MspI | CCGG | 3 cut(s) | 42, 69, 383 |
| MspR9I | CCNGG | 1 cut(s) | 69 |
| MvnI | CGCG | 2 cut(s) | 65, 243 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 47, 71, 301, 649, 690, 875 |
| NaeI | GCCGGC | 1 cut(s) | 43 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NciI | CCSGG | 1 cut(s) | 69 |
| NdeII | GATC | 1 cut(s) | 33 |
| NgoMIV | GCCGGC | 1 cut(s) | 41 |
| NlaIII | CATG | 4 cut(s) | 25, 199, 349, 612 |
| NlaIV | GGNNCC | 4 cut(s) | 49, 73, 217, 428 |
| NmeAIII | GCCGAG | 1 cut(s) | 100 |
| NmuCI | GTSAC | 1 cut(s) | 341 |
| OliI | CACNNNNGTG | 1 cut(s) | 828 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PciSI | GCTCTTC | 1 cut(s) | 704 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 132 |
| PdiI | GCCGGC | 1 cut(s) | 43 |
| PdmI | GAANNNNTTC | 2 cut(s) | 282, 628 |
| PfeI | GAWTC | 2 cut(s) | 28, 317 |
| PkrI | GCNGC | 6 cut(s) | 131, 245, 412, 507, 654, 763 |
| PleI | GAGTC | 4 cut(s) | 85, 257, 583, 788 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 4 cut(s) | 85, 257, 583, 788 |
| PspFI | CCCAGC | 1 cut(s) | 558 |
| PspN4I | GGNNCC | 4 cut(s) | 49, 73, 217, 428 |
| PspPI | GGNCC | 4 cut(s) | 366, 569, 659, 668 |
| PspXI | VCTCGAGB | 1 cut(s) | 119 |
| PstNI | CAGNNNCTG | 1 cut(s) | 803 |
| PsuI | RGATCY | 1 cut(s) | 33 |
| PvuII | CAGCTG | 2 cut(s) | 558, 764 |
| RsaI | GTAC | 4 cut(s) | 5, 167, 394, 822 |
| RsaNI | GTAC | 4 cut(s) | 4, 166, 393, 821 |
| RseI | CAYNNNNRTG | 4 cut(s) | 350, 644, 806, 828 |
| SapI | GCTCTTC | 1 cut(s) | 704 |
| SaqAI | TTAA | 1 cut(s) | 419 |
| SatI | GCNGC | 6 cut(s) | 130, 244, 411, 506, 653, 762 |
| Sau3AI | GATC | 1 cut(s) | 33 |
| Sau96I | GGNCC | 4 cut(s) | 366, 569, 659, 668 |
| SchI | GAGTC | 4 cut(s) | 86, 257, 584, 788 |
| ScrFI | CCNGG | 1 cut(s) | 69 |
| SduI | GDGCHC | 4 cut(s) | 218, 314, 641, 699 |
| SfaNI | GCATC | 2 cut(s) | 492, 639 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SgrAI | CRCCGGYG | 1 cut(s) | 41 |
| SinI | GGWCC | 2 cut(s) | 659, 668 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 350, 644, 806, 828 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| Sse9I | AATT | 1 cut(s) | 521 |
| SsiI | CCGC | 7 cut(s) | 39, 45, 129, 177, 243, 652, 693 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspMI | CTAG | 1 cut(s) | 305 |
| StyD4I | CCNGG | 1 cut(s) | 67 |
| StyI | CCWWGG | 1 cut(s) | 671 |
| TaaI | ACNGT | 2 cut(s) | 476, 827 |
| TaiI | ACGT | 2 cut(s) | 165, 258 |
| TaqI | TCGA | 4 cut(s) | 84, 120, 141, 192 |
| TasI | AATT | 1 cut(s) | 521 |
| TatI | WGTACW | 3 cut(s) | 165, 392, 820 |
| TauI | GCSGC | 3 cut(s) | 132, 246, 655 |
| TfiI | GAWTC | 2 cut(s) | 28, 317 |
| Tru1I | TTAA | 1 cut(s) | 419 |
| Tru9I | TTAA | 1 cut(s) | 419 |
| TscAI | CASTG | 2 cut(s) | 481, 808 |
| TseFI | GTSAC | 1 cut(s) | 341 |
| TseI | GCWGC | 3 cut(s) | 410, 505, 761 |
| Tsp45I | GTSAC | 1 cut(s) | 341 |
| TspGWI | ACGGA | 3 cut(s) | 256, 419, 470 |
| TspRI | CASTG | 2 cut(s) | 481, 808 |
| VneI | GTGCAC | 1 cut(s) | 637 |
| VpaK11BI | GGWCC | 2 cut(s) | 659, 668 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XmiI | GTMKAC | 1 cut(s) | 252 |
| XmnI | GAANNNNTTC | 2 cut(s) | 282, 628 |
| XspI | CTAG | 1 cut(s) | 305 |