serine--tRNA ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 |
| fragaria_vesca | FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 |
| malus_domestica | MD08G1187900.v1.1 MD15G1373800.v1.1 |
| prunus_persica | Prupe.1G522400_v2.0.a1 Prupe.1G522400_v2.0.a1 |
| pyrus_communis | pycom08g16120 pycom15g33480 pycom15g33490 |
| rosa_chinensis | RchiOBHm_Chr7g0242571 |
| rosa_laevigata | RLG00000000891 |
| rosa_multiflora | Rmu_sc0000429.1_g000097 |
| rosa_roxburghii | Rroxscaffold_3G00222620 |
| rosa_rugosa | Rorug07G0315500 Rorug07G0315600 Rorug07G0315700 Rorug07G0315800 |
| rosa_samantha | Rh7AG470900 Rh7BG441200 Rh7CG487800 Rh7DG456400 |
| rosa_wichuraiana | Rw0G005480 Rw7G039270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 771 |
| AarI | CACCTGC | 2 cut(s) | 605, 817 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 227 |
| AatII | GACGTC | 1 cut(s) | 910 |
| Acc36I | ACCTGC | 4 cut(s) | 99, 605, 614, 817 |
| AccI | GTMKAC | 2 cut(s) | 133, 904 |
| AccII | CGCG | 1 cut(s) | 856 |
| AccIII | TCCGGA | 1 cut(s) | 151 |
| AciI | CCGC | 2 cut(s) | 168, 856 |
| AclWI | GGATC | 3 cut(s) | 243, 910, 923 |
| AcsI | RAATTY | 3 cut(s) | 305, 534, 821 |
| AcuI | CTGAAG | 2 cut(s) | 80, 915 |
| AcvI | CACGTG | 1 cut(s) | 212 |
| AcyI | GRCGYC | 1 cut(s) | 907 |
| AfaI | GTAC | 4 cut(s) | 607, 628, 889, 1023 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 167, 530, 610, 959, 1106 |
| AflII | CTTAAG | 2 cut(s) | 95, 317 |
| AgsI | TTSAA | 5 cut(s) | 183, 245, 434, 577, 737 |
| AjnI | CCWGG | 1 cut(s) | 844 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 28 |
| AluBI | AGCT | 5 cut(s) | 100, 112, 670, 724, 1120 |
| AluI | AGCT | 5 cut(s) | 100, 112, 670, 724, 1120 |
| Alw21I | GWGCWC | 3 cut(s) | 114, 726, 808 |
| Alw26I | GTCTC | 1 cut(s) | 595 |
| Alw44I | GTGCAC | 1 cut(s) | 804 |
| AlwI | GGATC | 3 cut(s) | 243, 910, 923 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 620 |
| Aor13HI | TCCGGA | 1 cut(s) | 151 |
| AoxI | GGCC | 1 cut(s) | 1097 |
| ApaLI | GTGCAC | 1 cut(s) | 804 |
| ApeKI | GCWGC | 3 cut(s) | 204, 281, 620 |
| ApoI | RAATTY | 3 cut(s) | 305, 534, 821 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 892, 924 |
| AspLEI | GCGC | 1 cut(s) | 856 |
| AspS9I | GGNCC | 1 cut(s) | 420 |
| AsuC2I | CCSGG | 1 cut(s) | 793 |
| AsuHPI | GGTGA | 2 cut(s) | 230, 875 |
| AvaII | GGWCC | 1 cut(s) | 420 |
| BaeGI | GKGCMC | 1 cut(s) | 808 |
| BamHI | GGATCC | 1 cut(s) | 915 |
| BanII | GRGCYC | 2 cut(s) | 114, 726 |
| BbrPI | CACGTG | 1 cut(s) | 212 |
| BbsI | GAAGAC | 2 cut(s) | 93, 1071 |
| Bbv12I | GWGCWC | 3 cut(s) | 114, 726, 808 |
| BbvI | GCAGC | 3 cut(s) | 216, 268, 607 |
| BccI | CCATC | 2 cut(s) | 190, 337 |
| BciT130I | CCWGG | 1 cut(s) | 846 |
| BclI | TGATCA | 1 cut(s) | 493 |
| BcnI | CCSGG | 1 cut(s) | 793 |
| BcoDI | GTCTC | 1 cut(s) | 595 |
| BfaI | CTAG | 3 cut(s) | 338, 1115, 1137 |
| BfmI | CTRYAG | 4 cut(s) | 480, 513, 621, 1074 |
| BfrI | CTTAAG | 2 cut(s) | 95, 317 |
| BfuAI | ACCTGC | 4 cut(s) | 99, 605, 614, 817 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1096 |
| BglII | AGATCT | 2 cut(s) | 262, 742 |
| BisI | GCNGC | 3 cut(s) | 205, 282, 621 |
| BlsI | GCNGC | 3 cut(s) | 206, 283, 622 |
| Bme1390I | CCNGG | 2 cut(s) | 793, 846 |
| Bme18I | GGWCC | 1 cut(s) | 420 |
| BmgT120I | GGNCC | 1 cut(s) | 420 |
| BmiI | GGNNCC | 2 cut(s) | 301, 917 |
| BmrFI | CCNGG | 2 cut(s) | 793, 846 |
| BmrI | ACTGGG | 1 cut(s) | 155 |
| BmsI | GCATC | 7 cut(s) | 268, 324, 569, 797, 831, 887, 950 |
| BmuI | ACTGGG | 1 cut(s) | 155 |
| BpiI | GAAGAC | 2 cut(s) | 93, 1071 |
| BpmI | CTGGAG | 1 cut(s) | 692 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1086 |
| BpuMI | CCSGG | 1 cut(s) | 793 |
| BsaAI | YACGTR | 1 cut(s) | 212 |
| BsaBI | GATNNNNATC | 1 cut(s) | 261 |
| BsaHI | GRCGYC | 1 cut(s) | 907 |
| BsaJI | CCNNGG | 4 cut(s) | 454, 792, 845, 1025 |
| BsaWI | WCCGGW | 2 cut(s) | 151, 918 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 167, 530, 610, 959, 1106 |
| Bse1I | ACTGG | 3 cut(s) | 161, 362, 658 |
| Bse3DI | GCAATG | 1 cut(s) | 595 |
| Bse8I | GATNNNNATC | 1 cut(s) | 261 |
| BseAI | TCCGGA | 1 cut(s) | 151 |
| BseBI | CCWGG | 1 cut(s) | 846 |
| BseDI | CCNNGG | 4 cut(s) | 454, 792, 845, 1025 |
| BseGI | GGATG | 6 cut(s) | 20, 148, 160, 788, 846, 1035 |
| BseJI | GATNNNNATC | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 167, 530, 610, 959, 1106 |
| BseMI | GCAATG | 1 cut(s) | 595 |
| BseMII | CTCAG | 3 cut(s) | 482, 600, 1077 |
| BseNI | ACTGG | 3 cut(s) | 161, 362, 658 |
| BseSI | GKGCMC | 1 cut(s) | 808 |
| BseXI | GCAGC | 3 cut(s) | 216, 268, 607 |
| BsgI | GTGCAG | 1 cut(s) | 1038 |
| Bsh1236I | CGCG | 1 cut(s) | 856 |
| BshFI | GGCC | 1 cut(s) | 1099 |
| BsiHKAI | GWGCWC | 3 cut(s) | 114, 726, 808 |
| BsiSI | CCGG | 3 cut(s) | 152, 792, 919 |
| BslFI | GGGAC | 2 cut(s) | 143, 523 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 167, 530, 610, 959, 1106 |
| BsmAI | GTCTC | 1 cut(s) | 595 |
| BsmFI | GGGAC | 2 cut(s) | 143, 523 |
| BsnI | GGCC | 1 cut(s) | 1099 |
| Bsp1286I | GDGCHC | 3 cut(s) | 114, 726, 808 |
| Bsp13I | TCCGGA | 1 cut(s) | 151 |
| Bsp1407I | TGTACA | 1 cut(s) | 887 |
| Bsp143I | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| BspACI | CCGC | 2 cut(s) | 168, 856 |
| BspANI | GGCC | 1 cut(s) | 1099 |
| BspCNI | CTCAG | 3 cut(s) | 481, 601, 1078 |
| BspEI | TCCGGA | 1 cut(s) | 151 |
| BspFNI | CGCG | 1 cut(s) | 856 |
| BspHI | TCATGA | 1 cut(s) | 375 |
| BspLI | GGNNCC | 2 cut(s) | 301, 917 |
| BspMAI | CTGCAG | 2 cut(s) | 517, 625 |
| BspMI | ACCTGC | 4 cut(s) | 99, 605, 614, 817 |
| BspPI | GGATC | 3 cut(s) | 243, 910, 923 |
| BspQI | GCTCTTC | 1 cut(s) | 714 |
| BspTI | CTTAAG | 2 cut(s) | 95, 317 |
| BsrDI | GCAATG | 1 cut(s) | 595 |
| BsrGI | TGTACA | 1 cut(s) | 887 |
| BsrI | ACTGG | 3 cut(s) | 161, 362, 658 |
| BssECI | CCNNGG | 4 cut(s) | 454, 792, 845, 1025 |
| BssMI | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| BssNAI | GTATAC | 1 cut(s) | 134 |
| BssNI | GRCGYC | 1 cut(s) | 907 |
| Bst1107I | GTATAC | 1 cut(s) | 134 |
| Bst2UI | CCWGG | 1 cut(s) | 846 |
| Bst6I | CTCTTC | 2 cut(s) | 693, 714 |
| BstACI | GRCGYC | 1 cut(s) | 907 |
| BstAFI | CTTAAG | 2 cut(s) | 95, 317 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 620 |
| BstAUI | TGTACA | 1 cut(s) | 887 |
| BstBAI | YACGTR | 1 cut(s) | 212 |
| BstC8I | GCNNGC | 2 cut(s) | 668, 1043 |
| BstDEI | CTNAG | 3 cut(s) | 468, 609, 1086 |
| BstDSI | CCRYGG | 2 cut(s) | 454, 1025 |
| BstF5I | GGATG | 6 cut(s) | 20, 148, 160, 788, 846, 1035 |
| BstFNI | CGCG | 1 cut(s) | 856 |
| BstHHI | GCGC | 1 cut(s) | 856 |
| BstKTI | GATC | 6 cut(s) | 238, 265, 496, 745, 918, 1035 |
| BstMAI | GTCTC | 1 cut(s) | 595 |
| BstMBI | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 620, 629, 1096 |
| BstNI | CCWGG | 1 cut(s) | 846 |
| BstNSI | RCATGY | 1 cut(s) | 1017 |
| BstSCI | CCNGG | 2 cut(s) | 791, 844 |
| BstSFI | CTRYAG | 4 cut(s) | 480, 513, 621, 1074 |
| BstSLI | GKGCMC | 1 cut(s) | 808 |
| BstUI | CGCG | 1 cut(s) | 856 |
| BstV1I | GCAGC | 3 cut(s) | 216, 268, 607 |
| BstV2I | GAAGAC | 2 cut(s) | 93, 1071 |
| BstX2I | RGATCY | 3 cut(s) | 262, 742, 915 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 455 |
| BstYI | RGATCY | 3 cut(s) | 262, 742, 915 |
| BstZ17I | GTATAC | 1 cut(s) | 134 |
| BsuRI | GGCC | 1 cut(s) | 1099 |
| BtgI | CCRYGG | 2 cut(s) | 454, 1025 |
| BtsCI | GGATG | 6 cut(s) | 20, 148, 160, 788, 846, 1035 |
| BtsI | GCAGTG | 1 cut(s) | 336 |
| BtsIMutI | CAGTG | 3 cut(s) | 301, 336, 570 |
| BveI | ACCTGC | 4 cut(s) | 99, 605, 614, 817 |
| Cac8I | GCNNGC | 2 cut(s) | 668, 1043 |
| CaiI | CAGNNNCTG | 1 cut(s) | 620 |
| CciI | TCATGA | 1 cut(s) | 375 |
| CfoI | GCGC | 1 cut(s) | 856 |
| Cfr13I | GGNCC | 1 cut(s) | 420 |
| CseI | GACGC | 2 cut(s) | 17, 370 |
| Csp6I | GTAC | 4 cut(s) | 606, 627, 888, 1022 |
| CviAII | CATG | 5 cut(s) | 376, 716, 784, 837, 1014 |
| CviQI | GTAC | 4 cut(s) | 606, 627, 888, 1022 |
| DdeI | CTNAG | 3 cut(s) | 468, 609, 1086 |
| DpnI | GATC | 6 cut(s) | 237, 264, 495, 744, 917, 1034 |
| DpnII | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 227 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 2 cut(s) | 693, 714 |
| EarI | CTCTTC | 2 cut(s) | 693, 714 |
| Ecl136II | GAGCTC | 2 cut(s) | 112, 724 |
| Eco24I | GRGCYC | 2 cut(s) | 114, 726 |
| Eco32I | GATATC | 1 cut(s) | 870 |
| Eco47I | GGWCC | 1 cut(s) | 420 |
| Eco53kI | GAGCTC | 2 cut(s) | 112, 724 |
| Eco57I | CTGAAG | 2 cut(s) | 80, 915 |
| Eco72I | CACGTG | 1 cut(s) | 212 |
| EcoICRI | GAGCTC | 2 cut(s) | 112, 724 |
| EcoO109I | RGGNCCY | 1 cut(s) | 420 |
| EcoRI | GAATTC | 1 cut(s) | 534 |
| EcoRII | CCWGG | 1 cut(s) | 844 |
| EcoRV | GATATC | 1 cut(s) | 870 |
| EcoT38I | GRGCYC | 2 cut(s) | 114, 726 |
| FaeI | CATG | 5 cut(s) | 379, 719, 787, 840, 1017 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 78, 110 |
| FaqI | GGGAC | 2 cut(s) | 143, 523 |
| FatI | CATG | 5 cut(s) | 375, 715, 783, 836, 1013 |
| FauI | CCCGC | 1 cut(s) | 161 |
| FauNDI | CATATG | 1 cut(s) | 540 |
| FbaI | TGATCA | 1 cut(s) | 493 |
| FblI | GTMKAC | 2 cut(s) | 133, 904 |
| Fnu4HI | GCNGC | 3 cut(s) | 205, 282, 621 |
| FokI | GGATG | 6 cut(s) | 7, 135, 167, 775, 853, 1042 |
| FriOI | GRGCYC | 2 cut(s) | 114, 726 |
| Fsp4HI | GCNGC | 3 cut(s) | 205, 282, 621 |
| FspBI | CTAG | 3 cut(s) | 338, 1115, 1137 |
| GlaI | GCGC | 1 cut(s) | 855 |
| GluI | GCNGC | 3 cut(s) | 205, 282, 621 |
| GsuI | CTGGAG | 1 cut(s) | 692 |
| HaeIII | GGCC | 1 cut(s) | 1099 |
| HapII | CCGG | 3 cut(s) | 152, 792, 919 |
| HgaI | GACGC | 2 cut(s) | 17, 370 |
| HhaI | GCGC | 1 cut(s) | 856 |
| Hin1I | GRCGYC | 1 cut(s) | 907 |
| Hin1II | CATG | 5 cut(s) | 379, 719, 787, 840, 1017 |
| Hin6I | GCGC | 1 cut(s) | 854 |
| HinP1I | GCGC | 1 cut(s) | 854 |
| HincII | GTYRAC | 1 cut(s) | 905 |
| HindII | GTYRAC | 1 cut(s) | 905 |
| HindIII | AAGCTT | 1 cut(s) | 98 |
| HinfI | GANTC | 6 cut(s) | 17, 55, 145, 520, 545, 651 |
| HpaII | CCGG | 3 cut(s) | 152, 792, 919 |
| HphI | GGTGA | 2 cut(s) | 230, 875 |
| Hpy166II | GTNNAC | 4 cut(s) | 134, 655, 806, 905 |
| Hpy188I | TCNGA | 4 cut(s) | 25, 60, 289, 934 |
| Hpy188III | TCNNGA | 6 cut(s) | 152, 376, 508, 1085, 1115, 1137 |
| Hpy8I | GTNNAC | 4 cut(s) | 134, 655, 806, 905 |
| Hpy99I | CGWCG | 1 cut(s) | 909 |
| HpyAV | CCTTC | 3 cut(s) | 41, 55, 251 |
| HpyCH4IV | ACGT | 3 cut(s) | 211, 907, 998 |
| HpyCH4V | TGCA | 7 cut(s) | 515, 560, 623, 806, 878, 1007, 1019 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 620, 629, 1096 |
| HpyF3I | CTNAG | 3 cut(s) | 468, 609, 1086 |
| HpySE526I | ACGT | 3 cut(s) | 211, 907, 998 |
| Hsp92I | GRCGYC | 1 cut(s) | 907 |
| Hsp92II | CATG | 5 cut(s) | 379, 719, 787, 840, 1017 |
| HspAI | GCGC | 1 cut(s) | 854 |
| Kpn2I | TCCGGA | 1 cut(s) | 151 |
| Ksp22I | TGATCA | 1 cut(s) | 493 |
| Kzo9I | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| LguI | GCTCTTC | 1 cut(s) | 714 |
| LmnI | GCTCC | 2 cut(s) | 117, 305 |
| Lsp1109I | GCAGC | 3 cut(s) | 216, 268, 607 |
| LweI | GCATC | 7 cut(s) | 268, 324, 569, 797, 831, 887, 950 |
| MaeI | CTAG | 3 cut(s) | 338, 1115, 1137 |
| MaeII | ACGT | 3 cut(s) | 211, 907, 998 |
| MaeIII | GTNAC | 1 cut(s) | 567 |
| MalI | GATC | 6 cut(s) | 237, 264, 495, 744, 917, 1034 |
| MboI | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| MboII | GAAGA | 9 cut(s) | 95, 98, 205, 710, 731, 749, 752, 921, 1076 |
| MflI | RGATCY | 3 cut(s) | 262, 742, 915 |
| MhlI | GDGCHC | 3 cut(s) | 114, 726, 808 |
| MluCI | AATT | 7 cut(s) | 178, 305, 534, 732, 821, 883, 986 |
| MlyI | GAGTC | 3 cut(s) | 26, 139, 660 |
| MmeI | TCCRAC | 2 cut(s) | 139, 472 |
| MroI | TCCGGA | 1 cut(s) | 151 |
| MseI | TTAA | 4 cut(s) | 96, 318, 398, 1001 |
| MslI | CAYNNNNRTG | 1 cut(s) | 153 |
| MspCI | CTTAAG | 2 cut(s) | 95, 317 |
| MspI | CCGG | 3 cut(s) | 152, 792, 919 |
| MspR9I | CCNGG | 2 cut(s) | 793, 846 |
| MvaI | CCWGG | 1 cut(s) | 846 |
| MvnI | CGCG | 1 cut(s) | 856 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 620, 629, 1096 |
| NciI | CCSGG | 1 cut(s) | 793 |
| NdeI | CATATG | 1 cut(s) | 540 |
| NdeII | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| NlaIII | CATG | 5 cut(s) | 379, 719, 787, 840, 1017 |
| NlaIV | GGNNCC | 2 cut(s) | 301, 917 |
| NspI | RCATGY | 1 cut(s) | 1017 |
| PagI | TCATGA | 1 cut(s) | 375 |
| PaqCI | CACCTGC | 2 cut(s) | 605, 817 |
| PciSI | GCTCTTC | 1 cut(s) | 714 |
| PfeI | GAWTC | 3 cut(s) | 55, 520, 545 |
| PkrI | GCNGC | 3 cut(s) | 206, 283, 622 |
| PleI | GAGTC | 3 cut(s) | 25, 139, 659 |
| PmaCI | CACGTG | 1 cut(s) | 212 |
| PmlI | CACGTG | 1 cut(s) | 212 |
| PpsI | GAGTC | 3 cut(s) | 25, 139, 659 |
| Ppu21I | YACGTR | 1 cut(s) | 212 |
| PpuMI | RGGWCCY | 1 cut(s) | 420 |
| PsiI | TTATAA | 1 cut(s) | 771 |
| Psp124BI | GAGCTC | 2 cut(s) | 114, 726 |
| Psp5II | RGGWCCY | 1 cut(s) | 420 |
| Psp6I | CCWGG | 1 cut(s) | 844 |
| PspCI | CACGTG | 1 cut(s) | 212 |
| PspGI | CCWGG | 1 cut(s) | 844 |
| PspN4I | GGNNCC | 2 cut(s) | 301, 917 |
| PspPI | GGNCC | 1 cut(s) | 420 |
| PspPPI | RGGWCCY | 1 cut(s) | 420 |
| PstI | CTGCAG | 2 cut(s) | 517, 625 |
| PstNI | CAGNNNCTG | 1 cut(s) | 620 |
| PsuI | RGATCY | 3 cut(s) | 262, 742, 915 |
| RsaI | GTAC | 4 cut(s) | 607, 628, 889, 1023 |
| RsaNI | GTAC | 4 cut(s) | 606, 627, 888, 1022 |
| RseI | CAYNNNNRTG | 1 cut(s) | 153 |
| SacI | GAGCTC | 2 cut(s) | 114, 726 |
| SalI | GTCGAC | 1 cut(s) | 903 |
| SapI | GCTCTTC | 1 cut(s) | 714 |
| SaqAI | TTAA | 4 cut(s) | 96, 318, 398, 1001 |
| SatI | GCNGC | 3 cut(s) | 205, 282, 621 |
| Sau3AI | GATC | 6 cut(s) | 235, 262, 493, 742, 915, 1032 |
| Sau96I | GGNCC | 1 cut(s) | 420 |
| SchI | GAGTC | 3 cut(s) | 26, 139, 660 |
| ScrFI | CCNGG | 2 cut(s) | 793, 846 |
| SduI | GDGCHC | 3 cut(s) | 114, 726, 808 |
| SfaNI | GCATC | 7 cut(s) | 268, 324, 569, 797, 831, 887, 950 |
| SfcI | CTRYAG | 4 cut(s) | 480, 513, 621, 1074 |
| SinI | GGWCC | 1 cut(s) | 420 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 153 |
| SmlI | CTYRAG | 2 cut(s) | 95, 317 |
| SmoI | CTYRAG | 2 cut(s) | 95, 317 |
| Sse9I | AATT | 7 cut(s) | 178, 305, 534, 732, 821, 883, 986 |
| SsiI | CCGC | 2 cut(s) | 168, 856 |
| SspMI | CTAG | 3 cut(s) | 338, 1115, 1137 |
| SstI | GAGCTC | 2 cut(s) | 114, 726 |
| StyD4I | CCNGG | 2 cut(s) | 791, 844 |
| TaiI | ACGT | 3 cut(s) | 214, 910, 1001 |
| TaqI | TCGA | 2 cut(s) | 649, 904 |
| TasI | AATT | 7 cut(s) | 178, 305, 534, 732, 821, 883, 986 |
| TatI | WGTACW | 1 cut(s) | 887 |
| TfiI | GAWTC | 3 cut(s) | 55, 520, 545 |
| Tru1I | TTAA | 4 cut(s) | 96, 318, 398, 1001 |
| Tru9I | TTAA | 4 cut(s) | 96, 318, 398, 1001 |
| TscAI | CASTG | 3 cut(s) | 301, 336, 570 |
| TseI | GCWGC | 3 cut(s) | 204, 281, 620 |
| TspDTI | ATGAA | 5 cut(s) | 17, 339, 392, 527, 732 |
| TspGWI | ACGGA | 2 cut(s) | 593, 1042 |
| TspRI | CASTG | 3 cut(s) | 301, 336, 570 |
| Vha464I | CTTAAG | 2 cut(s) | 95, 317 |
| VneI | GTGCAC | 1 cut(s) | 804 |
| VpaK11BI | GGWCC | 1 cut(s) | 420 |
| XapI | RAATTY | 3 cut(s) | 305, 534, 821 |
| XbaI | TCTAGA | 2 cut(s) | 1114, 1136 |
| XceI | RCATGY | 1 cut(s) | 1017 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 193 |
| XmiI | GTMKAC | 2 cut(s) | 133, 904 |
| XspI | CTAG | 3 cut(s) | 338, 1115, 1137 |
| ZraI | GACGTC | 1 cut(s) | 908 |