Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0002669

Physical Location & Seq

Genomic Coordinates Reverse (-)

64907068 .. 64912042

Gene Structure 4975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG456400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGGTTTTGGCGGGACTACCTTACAAACCCTCAAGCTGGCCGCAATTCCTTCACCTTCTTTTTCTTTCCGCTCCGTTTTCAACCCATTATCCAAAACCATCCTCTACCGCCATAGCCATACACAAAGGCTTCAAGCTCCTCTCTTCTTCGTTAAGGGTTTCTCAGTCTCGGCCGTACAAGCCACTGCCCCCGCAGCACCAAAAGCAACAAGCCCAGATGAGAAAGGTGTGAAACAGCAATGGAAAGCTGCGATAGATTTCAAGTGGATAAGGGAGAACAAGGATGCTGTTGCTGCCAATATAAACAAGAGGAACTCCAATGCCAATTTGGAACTTGTGCTTCAGCTCTACAATCAAATGTTGAATCTTCAAAAGGAAGTTGAGCGGCTTCGTGCGGAAAGGAATGCAGTGGCAAACAAGATGAAGGGGAAGTTGGAACCCTCTGAGCGTCAAAAACTCATAGAGGAAGGTAAGAATCTGAAGGAAGGCCTTCTTACATTGGAAGAAGACCTGCTTAAGCTTACTGATGAGCTCCAACAGGAAGCACAATGTATACCAAATATGACTCATCCAGATGTCCCAATAGGCGGGGAGGACAGTTCAACTGTTAGAAAGACGGTAGGCAGCCCTCGTGAGTTTAACTTTCCTATCAAGGATCACCTTCAACTTGGCAAGGATCTAGATCTTTTTGATTTTGATGCTGCTGCAGAGGTCAGTGGCTCAAAATTCTACTATCTAAAGAATGAAGCAGTGATGCTAGAGATGGGTCTTATCAACTGGACGCTCTTGGAAGTCATGAAACGGGGCTTCACACCTTTAACAACCCCAGAGATTGTAAGGTCCTCTGTTGTTGAAAAATGTGGTTTCCAACCCCGTGGAGCAAATACCCAGGTTTATTCTATTGAGGGTAGTGATCAATGCCTCATCGGCACTGCAGAGATTCCTGTTGGGGGAATTCACATGGATTCTATTCTTTCTGCATCAGTGTTACCTTTGAAATATGTGGCAGTCTCCCATTGCTTCCGTACTGAGGCAGGAGCTGCAGGTTCAGCAACAAGGGGTCTGTATCGAGTCCACCAGTTCAGCAAGTTGGAGATGTTTATATTATGCCAACCAGAGGAGAGTGACTTTTACCATGAAGAGCTCATAAAAATTGAAGAAGATCTATACTCATCACTAGGATTACATTATAAAACTCTGGACATGGCATCTGGGGATTTAGGTGCGCCGGCTTATCGTAAATTTGATATTGAGGCATGGATGCCTGGTTTAGCGCGGTTTGGTGAGATATCAAGCGCATCAAACTGTACAGACTACCAAAGTCGCCGTCTTGGGATCCGGTATCGTTCTTCAGAACCAGCATCAACAAATCCTAAAAAGGGTAAAGGCAACCTCTCTCCACCACAATTTGTTCATACATTAAATGCAACAGCATGTGCAGTACCACGAATGATCGTCTGCCTGCTGGAAAATAACCAGCAAGAAGATGGCTCTGTCGTAATTCCTGAGCCATTGAGGCCATTTATGGGTGGCATAGAGCTTATACAACCTAAATCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004828 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006434 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Seryl_tRNA_N tRNA-synt_2b

Protein Analysis

520

Amino Acids

57.75

Weight (kDa)

6.82

Isoelectric Point (pI)

51.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seryl_tRNA_N	PF02403	85 - 188	6e-21	Seryl-tRNA synthetase N-terminal domain
tRNA-synt_2b	PF00587	304 - 492	1.5e-30	tRNA synthetase class II core domain (G, H, P, S and T)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870
fragaria_vesca	FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670
malus_domestica	MD08G1187900.v1.1 MD15G1373800.v1.1
prunus_persica	Prupe.1G522400_v2.0.a1 Prupe.1G522400_v2.0.a1
pyrus_communis	pycom08g16120 pycom15g33480 pycom15g33490
rosa_chinensis	RchiOBHm_Chr7g0242571
rosa_laevigata	RLG00000000891
rosa_multiflora	Rmu_sc0000429.1_g000097
rosa_roxburghii	Rroxscaffold_3G00222620
rosa_rugosa	Rorug07G0315500 Rorug07G0315600 Rorug07G0315700 Rorug07G0315800
rosa_samantha	Rh7AG470900 Rh7BG441200 Rh7CG487800 Rh7DG456400
rosa_wichuraiana	Rw0G005480 Rw7G039270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1191
Acc36I	ACCTGC	2 cut(s)	519, 1034
AccBSI	CCGCTC	2 cut(s)	72, 385
AccI	GTMKAC	1 cut(s)	553
AccII	CGCG	1 cut(s)	1276
AciI	CCGC	9 cut(s)	12, 42, 70, 109, 192, 385, 395, 588, 1276
AclWI	GGATC	4 cut(s)	663, 684, 1330, 1343
AcoI	YGGCCR	2 cut(s)	39, 171
AcsI	RAATTY	3 cut(s)	725, 954, 1241
AcuI	CTGAAG	3 cut(s)	326, 500, 1335
AfaI	GTAC	4 cut(s)	177, 1027, 1309, 1443
AfiI	CCNNNNNNNGG	7 cut(s)	37, 587, 950, 1030, 1117, 1379, 1526
AflII	CTTAAG	1 cut(s)	515
AjnI	CCWGG	2 cut(s)	888, 1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	416, 448
AluBI	AGCT	9 cut(s)	37, 137, 248, 346, 520, 532, 1040, 1144, 1540
AluI	AGCT	9 cut(s)	37, 137, 248, 346, 520, 532, 1040, 1144, 1540
Alw21I	GWGCWC	2 cut(s)	534, 1146
Alw26I	GTCTC	2 cut(s)	172, 1015
AlwI	GGATC	4 cut(s)	663, 684, 1330, 1343
AlwNI	CAGNNNCTG	1 cut(s)	1040
AoxI	GGCC	4 cut(s)	39, 171, 487, 1517
ApeKI	GCWGC	7 cut(s)	194, 248, 293, 624, 701, 704, 1040
ApoI	RAATTY	3 cut(s)	725, 954, 1241
ArsI	GACNNNNNNTTYG	2 cut(s)	1312, 1344
Asp700I	GAANNNNTTC	1 cut(s)	489
AspLEI	GCGC	3 cut(s)	1228, 1276, 1298
AspS9I	GGNCC	1 cut(s)	840
AsuHPI	GGTGA	3 cut(s)	45, 650, 1295
AvaII	GGWCC	1 cut(s)	840
BamHI	GGATCC	1 cut(s)	1335
BanII	GRGCYC	2 cut(s)	534, 1146
BauI	CACGAG	1 cut(s)	630
BbsI	GAAGAC	1 cut(s)	513
Bbv12I	GWGCWC	2 cut(s)	534, 1146
BbvI	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BccI	CCATC	3 cut(s)	107, 757, 1481
BceAI	ACGGC	2 cut(s)	158, 1311
BciT130I	CCWGG	2 cut(s)	890, 1266
BclI	TGATCA	1 cut(s)	913
BcoDI	GTCTC	2 cut(s)	172, 1015
BfaI	CTAG	4 cut(s)	680, 758, 1178, 1557
BfmI	CTRYAG	3 cut(s)	705, 933, 1041
BfrI	CTTAAG	1 cut(s)	515
BfuAI	ACCTGC	2 cut(s)	519, 1034
BglI	GCCNNNNNGGC	2 cut(s)	927, 1516
BglII	AGATCT	2 cut(s)	682, 1162
BisI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
BlsI	GCNGC	9 cut(s)	43, 196, 250, 295, 387, 626, 703, 706, 1042
Bme1390I	CCNGG	2 cut(s)	890, 1266
Bme18I	GGWCC	1 cut(s)	840
BmgT120I	GGNCC	1 cut(s)	840
BmiI	GGNNCC	2 cut(s)	438, 1337
BmrFI	CCNGG	2 cut(s)	890, 1266
BmsI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
BpiI	GAAGAC	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	1506
BpuEI	CTTGAG	1 cut(s)	17
BsaBI	GATNNNNATC	1 cut(s)	681
BsaJI	CCNNGG	2 cut(s)	874, 888
BsaWI	WCCGGW	1 cut(s)	1338
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 587, 950, 1030, 1117, 1379, 1526
Bse118I	RCCGGY	1 cut(s)	1228
Bse1I	ACTGG	2 cut(s)	782, 1078
Bse3DI	GCAATG	2 cut(s)	245, 1015
Bse8I	GATNNNNATC	1 cut(s)	681
BseBI	CCWGG	2 cut(s)	890, 1266
BseDI	CCNNGG	2 cut(s)	874, 888
BseGI	GGATG	4 cut(s)	99, 289, 568, 1266
BseJI	GATNNNNATC	1 cut(s)	681
BseLI	CCNNNNNNNGG	7 cut(s)	37, 587, 950, 1030, 1117, 1379, 1526
BseMI	GCAATG	2 cut(s)	245, 1015
BseMII	CTCAG	4 cut(s)	177, 435, 1020, 1497
BseNI	ACTGG	2 cut(s)	782, 1078
BseRI	GAGGAG	2 cut(s)	129, 1133
BseX3I	CGGCCG	1 cut(s)	171
BseXI	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BsgI	GTGCAG	1 cut(s)	1458
Bsh1236I	CGCG	1 cut(s)	1276
Bsh1285I	CGRYCG	1 cut(s)	174
BshFI	GGCC	4 cut(s)	41, 173, 489, 1519
BsiEI	CGRYCG	1 cut(s)	174
BsiHKAI	GWGCWC	2 cut(s)	534, 1146
BsiSI	CCGG	2 cut(s)	1229, 1339
BslFI	GGGAC	2 cut(s)	28, 563
BslI	CCNNNNNNNGG	7 cut(s)	37, 587, 950, 1030, 1117, 1379, 1526
BsmAI	GTCTC	2 cut(s)	172, 1015
BsmFI	GGGAC	2 cut(s)	28, 563
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	4 cut(s)	41, 173, 489, 1519
Bsp1286I	GDGCHC	2 cut(s)	534, 1146
Bsp1407I	TGTACA	1 cut(s)	1307
Bsp143I	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BspACI	CCGC	9 cut(s)	12, 42, 70, 109, 192, 385, 395, 588, 1276
BspANI	GGCC	4 cut(s)	41, 173, 489, 1519
BspCNI	CTCAG	4 cut(s)	176, 436, 1021, 1498
BspFNI	CGCG	1 cut(s)	1276
BspHI	TCATGA	1 cut(s)	795
BspLI	GGNNCC	2 cut(s)	438, 1337
BspMAI	CTGCAG	3 cut(s)	709, 937, 1045
BspMI	ACCTGC	2 cut(s)	519, 1034
BspPI	GGATC	4 cut(s)	663, 684, 1330, 1343
BspQI	GCTCTTC	1 cut(s)	1134
BspTI	CTTAAG	1 cut(s)	515
BsrBI	CCGCTC	2 cut(s)	72, 385
BsrDI	GCAATG	2 cut(s)	245, 1015
BsrFI	RCCGGY	1 cut(s)	1228
BsrGI	TGTACA	1 cut(s)	1307
BsrI	ACTGG	2 cut(s)	782, 1078
BssAI	RCCGGY	1 cut(s)	1228
BssECI	CCNNGG	2 cut(s)	874, 888
BssMI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BssNAI	GTATAC	1 cut(s)	554
BssSI	CACGAG	1 cut(s)	630
Bst1107I	GTATAC	1 cut(s)	554
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	2 cut(s)	890, 1266
Bst4CI	ACNGT	4 cut(s)	599, 607, 619, 1307
Bst6I	CTCTTC	2 cut(s)	149, 1134
BstAFI	CTTAAG	1 cut(s)	515
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstAUI	TGTACA	1 cut(s)	1307
BstC8I	GCNNGC	3 cut(s)	39, 1230, 1463
BstDEI	CTNAG	4 cut(s)	163, 444, 1029, 1506
BstDSI	CCRYGG	1 cut(s)	874
BstF5I	GGATG	4 cut(s)	99, 289, 568, 1266
BstFNI	CGCG	1 cut(s)	1276
BstHHI	GCGC	3 cut(s)	1228, 1276, 1298
BstKTI	GATC	7 cut(s)	658, 679, 685, 916, 1165, 1338, 1455
BstMAI	GTCTC	2 cut(s)	172, 1015
BstMBI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BstMCI	CGRYCG	1 cut(s)	174
BstMWI	GCNNNNNNNGC	8 cut(s)	179, 194, 203, 293, 927, 1040, 1049, 1516
BstNI	CCWGG	2 cut(s)	890, 1266
BstNSI	RCATGY	1 cut(s)	1437
BstSCI	CCNGG	2 cut(s)	888, 1264
BstSFI	CTRYAG	3 cut(s)	705, 933, 1041
BstUI	CGCG	1 cut(s)	1276
BstV1I	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BstV2I	GAAGAC	1 cut(s)	513
BstX2I	RGATCY	4 cut(s)	676, 682, 1162, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	875
BstYI	RGATCY	4 cut(s)	676, 682, 1162, 1335
BstZ17I	GTATAC	1 cut(s)	554
BstZI	CGGCCG	1 cut(s)	171
BsuRI	GGCC	4 cut(s)	41, 173, 489, 1519
BtgI	CCRYGG	1 cut(s)	874
BtsCI	GGATG	4 cut(s)	99, 289, 568, 1266
BtsI	GCAGTG	4 cut(s)	183, 414, 756, 930
BtsIMutI	CAGTG	6 cut(s)	183, 414, 721, 756, 930, 990
BveI	ACCTGC	2 cut(s)	519, 1034
Cac8I	GCNNGC	3 cut(s)	39, 1230, 1463
CaiI	CAGNNNCTG	1 cut(s)	1040
CciI	TCATGA	1 cut(s)	795
CfoI	GCGC	3 cut(s)	1228, 1276, 1298
Cfr10I	RCCGGY	1 cut(s)	1228
Cfr13I	GGNCC	1 cut(s)	840
CseI	GACGC	2 cut(s)	437, 790
Csp6I	GTAC	4 cut(s)	176, 1026, 1308, 1442
CviAII	CATG	6 cut(s)	796, 961, 1136, 1204, 1257, 1434
CviQI	GTAC	4 cut(s)	176, 1026, 1308, 1442
DdeI	CTNAG	4 cut(s)	163, 444, 1029, 1506
DpnI	GATC	7 cut(s)	657, 678, 684, 915, 1164, 1337, 1454
DpnII	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
EaeI	YGGCCR	2 cut(s)	39, 171
EagI	CGGCCG	1 cut(s)	171
Eam1104I	CTCTTC	2 cut(s)	149, 1134
EarI	CTCTTC	2 cut(s)	149, 1134
Ecl136II	GAGCTC	2 cut(s)	532, 1144
EclXI	CGGCCG	1 cut(s)	171
Eco147I	AGGCCT	1 cut(s)	489
Eco24I	GRGCYC	2 cut(s)	534, 1146
Eco32I	GATATC	1 cut(s)	1290
Eco47I	GGWCC	1 cut(s)	840
Eco52I	CGGCCG	1 cut(s)	171
Eco53kI	GAGCTC	2 cut(s)	532, 1144
Eco57I	CTGAAG	3 cut(s)	326, 500, 1335
EcoICRI	GAGCTC	2 cut(s)	532, 1144
EcoO109I	RGGNCCY	1 cut(s)	840
EcoRI	GAATTC	1 cut(s)	954
EcoRII	CCWGG	2 cut(s)	888, 1264
EcoRV	GATATC	1 cut(s)	1290
EcoT38I	GRGCYC	2 cut(s)	534, 1146
FaeI	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
FalI	AAGNNNNNCTT	4 cut(s)	477, 509, 498, 530
FaqI	GGGAC	2 cut(s)	28, 563
FatI	CATG	6 cut(s)	795, 960, 1135, 1203, 1256, 1433
FauI	CCCGC	3 cut(s)	5, 199, 581
FbaI	TGATCA	1 cut(s)	913
FblI	GTMKAC	1 cut(s)	553
Fnu4HI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
FokI	GGATG	4 cut(s)	86, 296, 555, 1273
FriOI	GRGCYC	2 cut(s)	534, 1146
Fsp4HI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
FspBI	CTAG	4 cut(s)	680, 758, 1178, 1557
GlaI	GCGC	3 cut(s)	1227, 1275, 1297
GluI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
HaeIII	GGCC	4 cut(s)	41, 173, 489, 1519
HapII	CCGG	2 cut(s)	1229, 1339
HgaI	GACGC	2 cut(s)	437, 790
HhaI	GCGC	3 cut(s)	1228, 1276, 1298
Hin1II	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
Hin6I	GCGC	3 cut(s)	1226, 1274, 1296
HinP1I	GCGC	3 cut(s)	1226, 1274, 1296
HindIII	AAGCTT	1 cut(s)	518
HinfI	GANTC	6 cut(s)	364, 475, 565, 940, 965, 1071
HpaII	CCGG	2 cut(s)	1229, 1339
HphI	GGTGA	3 cut(s)	45, 650, 1295
Hpy166II	GTNNAC	2 cut(s)	554, 1075
Hpy188I	TCNGA	3 cut(s)	445, 480, 1354
Hpy188III	TCNNGA	7 cut(s)	572, 632, 680, 796, 1199, 1505, 1557
Hpy8I	GTNNAC	2 cut(s)	554, 1075
HpyAV	CCTTC	8 cut(s)	60, 66, 418, 461, 475, 479, 500, 671
HpyCH4III	ACNGT	4 cut(s)	599, 607, 619, 1307
HpyCH4V	TGCA	7 cut(s)	407, 707, 935, 980, 1043, 1427, 1439
HpyF10VI	GCNNNNNNNGC	8 cut(s)	179, 194, 203, 293, 927, 1040, 1049, 1516
HpyF3I	CTNAG	4 cut(s)	163, 444, 1029, 1506
Hsp92II	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
HspAI	GCGC	3 cut(s)	1226, 1274, 1296
KroI	GCCGGC	1 cut(s)	1228
KroNI	GCCGGC	1 cut(s)	1230
Ksp22I	TGATCA	1 cut(s)	913
Kzo9I	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
LguI	GCTCTTC	1 cut(s)	1134
LmnI	GCTCC	5 cut(s)	77, 142, 537, 878, 1037
Lsp1109I	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
LweI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
MaeI	CTAG	4 cut(s)	680, 758, 1178, 1557
MaeIII	GTNAC	2 cut(s)	987, 1124
MalI	GATC	7 cut(s)	657, 678, 684, 915, 1164, 1337, 1454
MbiI	CCGCTC	2 cut(s)	72, 385
MboI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
MflI	RGATCY	4 cut(s)	676, 682, 1162, 1335
MhlI	GDGCHC	2 cut(s)	534, 1146
MluCI	AATT	8 cut(s)	45, 325, 725, 954, 1152, 1241, 1406, 1500
MlyI	GAGTC	2 cut(s)	559, 1080
MmeI	TCCRAC	4 cut(s)	414, 559, 892, 1071
MroNI	GCCGGC	1 cut(s)	1228
MroXI	GAANNNNTTC	1 cut(s)	489
MseI	TTAA	5 cut(s)	153, 516, 639, 818, 1421
MslI	CAYNNNNRTG	1 cut(s)	573
MspCI	CTTAAG	1 cut(s)	515
MspI	CCGG	2 cut(s)	1229, 1339
MspR9I	CCNGG	2 cut(s)	890, 1266
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	2 cut(s)	890, 1266
MvnI	CGCG	1 cut(s)	1276
MwoI	GCNNNNNNNGC	8 cut(s)	179, 194, 203, 293, 927, 1040, 1049, 1516
NaeI	GCCGGC	1 cut(s)	1230
NdeII	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
NgoMIV	GCCGGC	1 cut(s)	1228
NlaIII	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
NlaIV	GGNNCC	2 cut(s)	438, 1337
NmeAIII	GCCGAG	1 cut(s)	149
NmuCI	GTSAC	1 cut(s)	1124
NspI	RCATGY	1 cut(s)	1437
PagI	TCATGA	1 cut(s)	795
PceI	AGGCCT	1 cut(s)	489
PciSI	GCTCTTC	1 cut(s)	1134
PctI	GAATGC	1 cut(s)	409
PdiI	GCCGGC	1 cut(s)	1230
PdmI	GAANNNNTTC	1 cut(s)	489
PfeI	GAWTC	4 cut(s)	364, 475, 940, 965
PkrI	GCNGC	9 cut(s)	43, 196, 250, 295, 387, 626, 703, 706, 1042
PleI	GAGTC	2 cut(s)	559, 1079
PpsI	GAGTC	2 cut(s)	559, 1079
PpuMI	RGGWCCY	1 cut(s)	840
PsiI	TTATAA	1 cut(s)	1191
Psp124BI	GAGCTC	2 cut(s)	534, 1146
Psp5II	RGGWCCY	1 cut(s)	840
Psp6I	CCWGG	2 cut(s)	888, 1264
PspGI	CCWGG	2 cut(s)	888, 1264
PspN4I	GGNNCC	2 cut(s)	438, 1337
PspPI	GGNCC	1 cut(s)	840
PspPPI	RGGWCCY	1 cut(s)	840
PstI	CTGCAG	3 cut(s)	709, 937, 1045
PstNI	CAGNNNCTG	1 cut(s)	1040
PsuI	RGATCY	4 cut(s)	676, 682, 1162, 1335
RsaI	GTAC	4 cut(s)	177, 1027, 1309, 1443
RsaNI	GTAC	4 cut(s)	176, 1026, 1308, 1442
RseI	CAYNNNNRTG	1 cut(s)	573
SacI	GAGCTC	2 cut(s)	534, 1146
SapI	GCTCTTC	1 cut(s)	1134
SaqAI	TTAA	5 cut(s)	153, 516, 639, 818, 1421
SatI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
Sau3AI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
Sau96I	GGNCC	1 cut(s)	840
SchI	GAGTC	2 cut(s)	559, 1080
ScrFI	CCNGG	2 cut(s)	890, 1266
SduI	GDGCHC	2 cut(s)	534, 1146
SfaNI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
SfcI	CTRYAG	3 cut(s)	705, 933, 1041
SinI	GGWCC	1 cut(s)	840
SmiMI	CAYNNNNRTG	1 cut(s)	573
SmlI	CTYRAG	2 cut(s)	32, 515
SmoI	CTYRAG	2 cut(s)	32, 515
Sse9I	AATT	8 cut(s)	45, 325, 725, 954, 1152, 1241, 1406, 1500
SseBI	AGGCCT	1 cut(s)	489
SsiI	CCGC	9 cut(s)	12, 42, 70, 109, 192, 385, 395, 588, 1276
SspMI	CTAG	4 cut(s)	680, 758, 1178, 1557
SstI	GAGCTC	2 cut(s)	534, 1146
StuI	AGGCCT	1 cut(s)	489
StyD4I	CCNGG	2 cut(s)	888, 1264
TaaI	ACNGT	4 cut(s)	599, 607, 619, 1307
TaqI	TCGA	1 cut(s)	1069
TasI	AATT	8 cut(s)	45, 325, 725, 954, 1152, 1241, 1406, 1500
TatI	WGTACW	1 cut(s)	1307
TauI	GCSGC	2 cut(s)	44, 388
TfiI	GAWTC	4 cut(s)	364, 475, 940, 965
Tru1I	TTAA	5 cut(s)	153, 516, 639, 818, 1421
Tru9I	TTAA	5 cut(s)	153, 516, 639, 818, 1421
TscAI	CASTG	6 cut(s)	190, 414, 721, 756, 937, 990
TseFI	GTSAC	1 cut(s)	1124
TseI	GCWGC	7 cut(s)	194, 248, 293, 624, 701, 704, 1040
Tsp45I	GTSAC	1 cut(s)	1124
TspDTI	ATGAA	5 cut(s)	437, 759, 812, 1152, 1403
TspGWI	ACGGA	2 cut(s)	64, 1013
TspRI	CASTG	6 cut(s)	190, 414, 721, 756, 937, 990
Vha464I	CTTAAG	1 cut(s)	515
VpaK11BI	GGWCC	1 cut(s)	840
XapI	RAATTY	3 cut(s)	725, 954, 1241
XbaI	TCTAGA	2 cut(s)	679, 1556
XceI	RCATGY	1 cut(s)	1437
XcmI	CCANNNNNNNNNTGG	2 cut(s)	325, 1484
XmiI	GTMKAC	1 cut(s)	553
XmnI	GAANNNNTTC	1 cut(s)	489
XspI	CTAG	4 cut(s)	680, 758, 1178, 1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.