Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0002669

Physical Location & Seq

Genomic Coordinates Forward (+)

60332173 .. 60337581

Gene Structure 5409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G039270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCGTTCTAAGCTCTCACTTTGTACTTTTCTTTTCTTCCTCAATTCCTCTCACGAAATGATATTGAATTTTAGTTTTGAACATCCAAAGAACACAACAATGGGTTTTGGCGGGACTACCTTACAAACCCTCAAGCTCGCCGCAATTCCTTCACCTTCTTCATCTTTCCGCTCCTTTTTCAAACCATTATCCAAAACCATCCTCTACCGCCACACACAAAGGCCTCAAGCTCCTCTCTTCTTCGTTAAGGGTTTCTCAGTCTCGGCCGTACAAGCCACTGCCCCCGCAGCACCAAAAGCAACAAGCCCAGATGAGAAAGGTGTGAAACCGCAATGGAAAGCTGCGATAGATTTCAAGTGGATAAGGGAGAACAAGGATGCTGTTGCTGCCAATATAAACAAGAGGAACTCCAATGCCAATTTGGAACTTGTGCTTCAGCTCTACAATAAAATGTTGAATCTTCAAAAGGAAGTTGAGCGGCTTCGTGCGGAAAGGAATGCAGTGGCAAACAAGATGAAAGGGAAGTTGGAACCCTCCGAGCGTCAAAAACTCATAGAGGAAGGTAAGAATCTGAAGGAAGGCCTTCTTACATTGGAAGAAGACTTGCTTAAGCTTACTGATGAGCTCCAACAGGAAGCACAATGTATACCAAATATGACTCATTCGGATGTCCCAATAGGCGGGGAGGACAGTTCAACTGTTAGAAAGACGGTAGGCAGCCCTCGCGAGTTTAACTTTCCTATCAAGGATCACCTTCAACTTGGAAAGGATCTAGATCTTTTTGATTTTGATGCTGCTGCAGAGGTCAGTGGCTCAAAATTCTACTATCTTAAGAATGAAGCAGTGATGCTAGAGATGGGTCTTATCAACTGGACGCTCTTGGAAGTCATGAAACGGGGCTTCACACCTTTAACAACCCCAGAGATTGTAAGGTCCTCTGTTGTTGAAAAATGTGGTTTCCAACCCCGTGGAGCAAATACCCAGGTTTATTCTATTGAGGGTAGCGATCAATGCCTCATCGGCACTGCAGAGATTCCTGTTGGGGGAATTCACATGGATTCTATTCTTTCTGCATCAGTGTTACCTTTGAAATATGTGGCAGTCTCCCATTGCTTCCGTACTGAGGCAGGTGCTGCAGGTTCAGCAACAAGGGGTCTGTATCGAGTCCACCAGTTCAGCAAGTTGGAGATGTTTATATTATGCCGACCAGAGGAGAGTGACTTTTACCATGAAGAGCTCATAAAAATTGAAGAAGATCTATTCTCATCACTAGGATTACATCATAAAACTCTGGACATGGCATCTGGGGATTTAGGTGCACCGGCTTATCGTAAATTTGATATTGAGGCATGGATGCCTGGTTTAGCACGGTTTGGTGAGATATCAAGCGCATCAAACTGTACAGACTACCAAAGTCGCCGTCTTGGGATCCGGTATCGTTCTTCAGAACCAGCATCTACAAATCCTAAAAAGGGTAAAGGCAACCTCTCTCCACCACAATTTGTTCATACATTAAATGCAACAGCATGTGCAGTACCACGAATGATCGTCTGCCTGCTGGAAAATAACCAGCAAGAAGATGGCTCTGTCGTTATTCCTGAGCCATTGAGGCCATTTATGGGTGGCATAGAGCTTATACAACCTAAATCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004828 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006434 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Seryl_tRNA_N tRNA-synt_2b

Protein Analysis

551

Amino Acids

61.36

Weight (kDa)

8.23

Isoelectric Point (pI)

51.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seryl_tRNA_N	PF02403	116 - 219	5.4e-21	Seryl-tRNA synthetase N-terminal domain
tRNA-synt_2b	PF00587	335 - 523	6.5e-30	tRNA synthetase class II core domain (G, H, P, S and T)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870
fragaria_vesca	FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670
malus_domestica	MD08G1187900.v1.1 MD15G1373800.v1.1
prunus_persica	Prupe.1G522400_v2.0.a1 Prupe.1G522400_v2.0.a1
pyrus_communis	pycom08g16120 pycom15g33480 pycom15g33490
rosa_chinensis	RchiOBHm_Chr7g0242571
rosa_laevigata	RLG00000000891
rosa_multiflora	Rmu_sc0000429.1_g000097
rosa_roxburghii	Rroxscaffold_3G00222620
rosa_rugosa	Rorug07G0315500 Rorug07G0315600 Rorug07G0315700 Rorug07G0315800
rosa_samantha	Rh7AG470900 Rh7BG441200 Rh7CG487800 Rh7DG456400
rosa_wichuraiana	Rw0G005480 Rw7G039270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1118
Acc36I	ACCTGC	2 cut(s)	1118, 1127
AccBSI	CCGCTC	2 cut(s)	171, 478
AccI	GTMKAC	1 cut(s)	646
AccII	CGCG	1 cut(s)	726
AciI	CCGC	9 cut(s)	111, 141, 169, 208, 285, 329, 478, 488, 681
AclWI	GGATC	4 cut(s)	756, 777, 1423, 1436
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	4 cut(s)	67, 818, 1047, 1334
AcuI	CTGAAG	3 cut(s)	419, 593, 1428
AfaI	GTAC	5 cut(s)	25, 270, 1120, 1402, 1536
AfiI	CCNNNNNNNGG	6 cut(s)	680, 1043, 1123, 1210, 1472, 1619
AflII	CTTAAG	2 cut(s)	608, 830
AjnI	CCWGG	2 cut(s)	981, 1357
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
AluBI	AGCT	9 cut(s)	13, 136, 230, 341, 439, 613, 625, 1237, 1633
AluI	AGCT	9 cut(s)	13, 136, 230, 341, 439, 613, 625, 1237, 1633
Alw21I	GWGCWC	3 cut(s)	627, 1239, 1321
Alw26I	GTCTC	2 cut(s)	265, 1108
Alw44I	GTGCAC	1 cut(s)	1317
AlwI	GGATC	4 cut(s)	756, 777, 1423, 1436
AlwNI	CAGNNNCTG	1 cut(s)	1133
AoxI	GGCC	4 cut(s)	221, 264, 580, 1610
ApaLI	GTGCAC	1 cut(s)	1317
ApeKI	GCWGC	7 cut(s)	287, 341, 386, 717, 794, 797, 1133
ApoI	RAATTY	4 cut(s)	67, 818, 1047, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	1405, 1437
Asp700I	GAANNNNTTC	1 cut(s)	582
AspLEI	GCGC	1 cut(s)	1391
AspS9I	GGNCC	1 cut(s)	933
AsuHPI	GGTGA	3 cut(s)	144, 743, 1388
AvaII	GGWCC	1 cut(s)	933
BaeGI	GKGCMC	1 cut(s)	1321
BamHI	GGATCC	1 cut(s)	1428
BanII	GRGCYC	2 cut(s)	627, 1239
BbsI	GAAGAC	1 cut(s)	606
Bbv12I	GWGCWC	3 cut(s)	627, 1239, 1321
BbvI	GCAGC	7 cut(s)	299, 328, 373, 729, 781, 784, 1120
BccI	CCATC	3 cut(s)	206, 850, 1574
BceAI	ACGGC	2 cut(s)	251, 1404
BciT130I	CCWGG	2 cut(s)	983, 1359
BcoDI	GTCTC	2 cut(s)	265, 1108
BfaI	CTAG	4 cut(s)	773, 851, 1271, 1650
BfmI	CTRYAG	3 cut(s)	798, 1026, 1134
BfrI	CTTAAG	2 cut(s)	608, 830
BfuAI	ACCTGC	2 cut(s)	1118, 1127
BglI	GCCNNNNNGGC	2 cut(s)	1020, 1609
BglII	AGATCT	2 cut(s)	775, 1255
BisI	GCNGC	9 cut(s)	141, 288, 342, 387, 479, 718, 795, 798, 1134
BlsI	GCNGC	9 cut(s)	142, 289, 343, 388, 480, 719, 796, 799, 1135
Bme1390I	CCNGG	2 cut(s)	983, 1359
Bme18I	GGWCC	1 cut(s)	933
BmgT120I	GGNCC	1 cut(s)	933
BmiI	GGNNCC	2 cut(s)	531, 1430
BmrFI	CCNGG	2 cut(s)	983, 1359
BmsI	GCATC	8 cut(s)	367, 781, 837, 1082, 1310, 1344, 1400, 1463
BpiI	GAAGAC	1 cut(s)	606
Bpu10I	CCTNAGC	1 cut(s)	1599
BpuEI	CTTGAG	2 cut(s)	116, 210
BsaBI	GATNNNNATC	1 cut(s)	774
BsaJI	CCNNGG	2 cut(s)	967, 981
BsaWI	WCCGGW	1 cut(s)	1431
Bsc4I	CCNNNNNNNGG	6 cut(s)	680, 1043, 1123, 1210, 1472, 1619
Bse118I	RCCGGY	1 cut(s)	1321
Bse1I	ACTGG	2 cut(s)	875, 1171
Bse3DI	GCAATG	2 cut(s)	338, 1108
Bse8I	GATNNNNATC	1 cut(s)	774
BseBI	CCWGG	2 cut(s)	983, 1359
BseDI	CCNNGG	2 cut(s)	967, 981
BseGI	GGATG	5 cut(s)	82, 198, 382, 673, 1359
BseJI	GATNNNNATC	1 cut(s)	774
BseLI	CCNNNNNNNGG	6 cut(s)	680, 1043, 1123, 1210, 1472, 1619
BseMI	GCAATG	2 cut(s)	338, 1108
BseMII	CTCAG	3 cut(s)	270, 1113, 1590
BseNI	ACTGG	2 cut(s)	875, 1171
BseRI	GAGGAG	2 cut(s)	222, 1226
BseSI	GKGCMC	1 cut(s)	1321
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	7 cut(s)	299, 328, 373, 729, 781, 784, 1120
BsgI	GTGCAG	1 cut(s)	1551
Bsh1236I	CGCG	1 cut(s)	726
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	4 cut(s)	223, 266, 582, 1612
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	3 cut(s)	627, 1239, 1321
BsiSI	CCGG	2 cut(s)	1322, 1432
BslFI	GGGAC	2 cut(s)	127, 656
BslI	CCNNNNNNNGG	6 cut(s)	680, 1043, 1123, 1210, 1472, 1619
BsmAI	GTCTC	2 cut(s)	265, 1108
BsmFI	GGGAC	2 cut(s)	127, 656
BsmI	GAATGC	1 cut(s)	502
BsnI	GGCC	4 cut(s)	223, 266, 582, 1612
Bsp1286I	GDGCHC	3 cut(s)	627, 1239, 1321
Bsp1407I	TGTACA	1 cut(s)	1400
Bsp143I	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
Bsp68I	TCGCGA	1 cut(s)	726
BspACI	CCGC	9 cut(s)	111, 141, 169, 208, 285, 329, 478, 488, 681
BspANI	GGCC	4 cut(s)	223, 266, 582, 1612
BspCNI	CTCAG	3 cut(s)	269, 1114, 1591
BspFNI	CGCG	1 cut(s)	726
BspHI	TCATGA	1 cut(s)	888
BspLI	GGNNCC	2 cut(s)	531, 1430
BspMAI	CTGCAG	3 cut(s)	802, 1030, 1138
BspMI	ACCTGC	2 cut(s)	1118, 1127
BspPI	GGATC	4 cut(s)	756, 777, 1423, 1436
BspQI	GCTCTTC	1 cut(s)	1227
BspTI	CTTAAG	2 cut(s)	608, 830
BsrBI	CCGCTC	2 cut(s)	171, 478
BsrDI	GCAATG	2 cut(s)	338, 1108
BsrFI	RCCGGY	1 cut(s)	1321
BsrGI	TGTACA	1 cut(s)	1400
BsrI	ACTGG	2 cut(s)	875, 1171
BssAI	RCCGGY	1 cut(s)	1321
BssECI	CCNNGG	2 cut(s)	967, 981
BssMI	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
BssNAI	GTATAC	1 cut(s)	647
Bst1107I	GTATAC	1 cut(s)	647
Bst2UI	CCWGG	2 cut(s)	983, 1359
Bst4CI	ACNGT	5 cut(s)	692, 700, 712, 1371, 1400
Bst6I	CTCTTC	2 cut(s)	242, 1227
BstAFI	CTTAAG	2 cut(s)	608, 830
BstAPI	GCANNNNNTGC	1 cut(s)	1133
BstAUI	TGTACA	1 cut(s)	1400
BstC8I	GCNNGC	2 cut(s)	138, 1556
BstDEI	CTNAG	4 cut(s)	9, 256, 1122, 1599
BstDSI	CCRYGG	1 cut(s)	967
BstF5I	GGATG	5 cut(s)	82, 198, 382, 673, 1359
BstFNI	CGCG	1 cut(s)	726
BstHHI	GCGC	1 cut(s)	1391
BstKTI	GATC	7 cut(s)	751, 772, 778, 1009, 1258, 1431, 1548
BstMAI	GTCTC	2 cut(s)	265, 1108
BstMBI	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
BstMCI	CGRYCG	1 cut(s)	267
BstNI	CCWGG	2 cut(s)	983, 1359
BstNSI	RCATGY	1 cut(s)	1530
BstSCI	CCNGG	2 cut(s)	981, 1357
BstSFI	CTRYAG	3 cut(s)	798, 1026, 1134
BstSLI	GKGCMC	1 cut(s)	1321
BstUI	CGCG	1 cut(s)	726
BstV1I	GCAGC	7 cut(s)	299, 328, 373, 729, 781, 784, 1120
BstV2I	GAAGAC	1 cut(s)	606
BstX2I	RGATCY	4 cut(s)	769, 775, 1255, 1428
BstXI	CCANNNNNNTGG	1 cut(s)	968
BstYI	RGATCY	4 cut(s)	769, 775, 1255, 1428
BstZ17I	GTATAC	1 cut(s)	647
BstZI	CGGCCG	1 cut(s)	264
BsuRI	GGCC	4 cut(s)	223, 266, 582, 1612
BtgI	CCRYGG	1 cut(s)	967
BtsCI	GGATG	5 cut(s)	82, 198, 382, 673, 1359
BtsI	GCAGTG	4 cut(s)	276, 507, 849, 1023
BtsIMutI	CAGTG	6 cut(s)	276, 507, 814, 849, 1023, 1083
BtuMI	TCGCGA	1 cut(s)	726
BveI	ACCTGC	2 cut(s)	1118, 1127
Cac8I	GCNNGC	2 cut(s)	138, 1556
CaiI	CAGNNNCTG	1 cut(s)	1133
CciI	TCATGA	1 cut(s)	888
CfoI	GCGC	1 cut(s)	1391
Cfr10I	RCCGGY	1 cut(s)	1321
Cfr13I	GGNCC	1 cut(s)	933
CseI	GACGC	2 cut(s)	530, 883
Csp6I	GTAC	5 cut(s)	24, 269, 1119, 1401, 1535
CviAII	CATG	6 cut(s)	889, 1054, 1229, 1297, 1350, 1527
CviQI	GTAC	5 cut(s)	24, 269, 1119, 1401, 1535
DdeI	CTNAG	4 cut(s)	9, 256, 1122, 1599
DpnI	GATC	7 cut(s)	750, 771, 777, 1008, 1257, 1430, 1547
DpnII	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
EaeI	YGGCCR	1 cut(s)	264
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	2 cut(s)	242, 1227
EarI	CTCTTC	2 cut(s)	242, 1227
Ecl136II	GAGCTC	2 cut(s)	625, 1237
EclXI	CGGCCG	1 cut(s)	264
Eco147I	AGGCCT	2 cut(s)	223, 582
Eco24I	GRGCYC	2 cut(s)	627, 1239
Eco32I	GATATC	1 cut(s)	1383
Eco47I	GGWCC	1 cut(s)	933
Eco52I	CGGCCG	1 cut(s)	264
Eco53kI	GAGCTC	2 cut(s)	625, 1237
Eco57I	CTGAAG	3 cut(s)	419, 593, 1428
EcoICRI	GAGCTC	2 cut(s)	625, 1237
EcoO109I	RGGNCCY	1 cut(s)	933
EcoRI	GAATTC	1 cut(s)	1047
EcoRII	CCWGG	2 cut(s)	981, 1357
EcoRV	GATATC	1 cut(s)	1383
EcoT38I	GRGCYC	2 cut(s)	627, 1239
FaeI	CATG	6 cut(s)	892, 1057, 1232, 1300, 1353, 1530
FalI	AAGNNNNNCTT	4 cut(s)	570, 602, 591, 623
FaqI	GGGAC	2 cut(s)	127, 656
FatI	CATG	6 cut(s)	888, 1053, 1228, 1296, 1349, 1526
FauI	CCCGC	3 cut(s)	104, 292, 674
FblI	GTMKAC	1 cut(s)	646
Fnu4HI	GCNGC	9 cut(s)	141, 288, 342, 387, 479, 718, 795, 798, 1134
FokI	GGATG	5 cut(s)	69, 185, 389, 680, 1366
FriOI	GRGCYC	2 cut(s)	627, 1239
Fsp4HI	GCNGC	9 cut(s)	141, 288, 342, 387, 479, 718, 795, 798, 1134
FspBI	CTAG	4 cut(s)	773, 851, 1271, 1650
GlaI	GCGC	1 cut(s)	1390
GluI	GCNGC	9 cut(s)	141, 288, 342, 387, 479, 718, 795, 798, 1134
HaeIII	GGCC	4 cut(s)	223, 266, 582, 1612
HapII	CCGG	2 cut(s)	1322, 1432
HgaI	GACGC	2 cut(s)	530, 883
HhaI	GCGC	1 cut(s)	1391
Hin1II	CATG	6 cut(s)	892, 1057, 1232, 1300, 1353, 1530
Hin6I	GCGC	1 cut(s)	1389
HinP1I	GCGC	1 cut(s)	1389
HindIII	AAGCTT	1 cut(s)	611
HinfI	GANTC	6 cut(s)	457, 568, 658, 1033, 1058, 1164
HpaII	CCGG	2 cut(s)	1322, 1432
HphI	GGTGA	3 cut(s)	144, 743, 1388
Hpy166II	GTNNAC	3 cut(s)	647, 1168, 1319
Hpy188I	TCNGA	4 cut(s)	538, 573, 667, 1447
Hpy188III	TCNNGA	7 cut(s)	53, 725, 773, 889, 1292, 1598, 1650
Hpy8I	GTNNAC	3 cut(s)	647, 1168, 1319
HpyAV	CCTTC	7 cut(s)	159, 165, 554, 568, 572, 593, 764
HpyCH4III	ACNGT	5 cut(s)	692, 700, 712, 1371, 1400
HpyCH4V	TGCA	8 cut(s)	500, 800, 1028, 1073, 1136, 1319, 1520, 1532
HpyF3I	CTNAG	4 cut(s)	9, 256, 1122, 1599
Hsp92II	CATG	6 cut(s)	892, 1057, 1232, 1300, 1353, 1530
HspAI	GCGC	1 cut(s)	1389
Kzo9I	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
LguI	GCTCTTC	1 cut(s)	1227
LmnI	GCTCC	4 cut(s)	176, 235, 630, 971
Lsp1109I	GCAGC	7 cut(s)	299, 328, 373, 729, 781, 784, 1120
LweI	GCATC	8 cut(s)	367, 781, 837, 1082, 1310, 1344, 1400, 1463
MaeI	CTAG	4 cut(s)	773, 851, 1271, 1650
MaeIII	GTNAC	2 cut(s)	1080, 1217
MalI	GATC	7 cut(s)	750, 771, 777, 1008, 1257, 1430, 1547
MbiI	CCGCTC	2 cut(s)	171, 478
MboI	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
MflI	RGATCY	4 cut(s)	769, 775, 1255, 1428
MhlI	GDGCHC	3 cut(s)	627, 1239, 1321
MluCI	AATT	9 cut(s)	43, 67, 144, 418, 818, 1047, 1245, 1334, 1499
MlyI	GAGTC	2 cut(s)	652, 1173
MmeI	TCCRAC	4 cut(s)	507, 652, 985, 1164
MroXI	GAANNNNTTC	1 cut(s)	582
MseI	TTAA	6 cut(s)	246, 609, 732, 831, 911, 1514
MslI	CAYNNNNRTG	2 cut(s)	98, 666
MspCI	CTTAAG	2 cut(s)	608, 830
MspI	CCGG	2 cut(s)	1322, 1432
MspR9I	CCNGG	2 cut(s)	983, 1359
Mva1269I	GAATGC	1 cut(s)	502
MvaI	CCWGG	2 cut(s)	983, 1359
MvnI	CGCG	1 cut(s)	726
NdeII	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
NlaIII	CATG	6 cut(s)	892, 1057, 1232, 1300, 1353, 1530
NlaIV	GGNNCC	2 cut(s)	531, 1430
NmeAIII	GCCGAG	1 cut(s)	242
NmuCI	GTSAC	1 cut(s)	1217
NruI	TCGCGA	1 cut(s)	726
NspI	RCATGY	1 cut(s)	1530
PagI	TCATGA	1 cut(s)	888
PaqCI	CACCTGC	1 cut(s)	1118
PceI	AGGCCT	2 cut(s)	223, 582
PciSI	GCTCTTC	1 cut(s)	1227
PctI	GAATGC	1 cut(s)	502
PdmI	GAANNNNTTC	1 cut(s)	582
PfeI	GAWTC	4 cut(s)	457, 568, 1033, 1058
PkrI	GCNGC	9 cut(s)	142, 289, 343, 388, 480, 719, 796, 799, 1135
PleI	GAGTC	2 cut(s)	652, 1172
PpsI	GAGTC	2 cut(s)	652, 1172
PpuMI	RGGWCCY	1 cut(s)	933
Psp124BI	GAGCTC	2 cut(s)	627, 1239
Psp5II	RGGWCCY	1 cut(s)	933
Psp6I	CCWGG	2 cut(s)	981, 1357
PspGI	CCWGG	2 cut(s)	981, 1357
PspN4I	GGNNCC	2 cut(s)	531, 1430
PspPI	GGNCC	1 cut(s)	933
PspPPI	RGGWCCY	1 cut(s)	933
PstI	CTGCAG	3 cut(s)	802, 1030, 1138
PstNI	CAGNNNCTG	1 cut(s)	1133
PsuI	RGATCY	4 cut(s)	769, 775, 1255, 1428
RruI	TCGCGA	1 cut(s)	726
RsaI	GTAC	5 cut(s)	25, 270, 1120, 1402, 1536
RsaNI	GTAC	5 cut(s)	24, 269, 1119, 1401, 1535
RseI	CAYNNNNRTG	2 cut(s)	98, 666
SacI	GAGCTC	2 cut(s)	627, 1239
SapI	GCTCTTC	1 cut(s)	1227
SaqAI	TTAA	6 cut(s)	246, 609, 732, 831, 911, 1514
SatI	GCNGC	9 cut(s)	141, 288, 342, 387, 479, 718, 795, 798, 1134
Sau3AI	GATC	7 cut(s)	748, 769, 775, 1006, 1255, 1428, 1545
Sau96I	GGNCC	1 cut(s)	933
SchI	GAGTC	2 cut(s)	652, 1173
ScrFI	CCNGG	2 cut(s)	983, 1359
SduI	GDGCHC	3 cut(s)	627, 1239, 1321
SfaNI	GCATC	8 cut(s)	367, 781, 837, 1082, 1310, 1344, 1400, 1463
SfcI	CTRYAG	3 cut(s)	798, 1026, 1134
SinI	GGWCC	1 cut(s)	933
SmiMI	CAYNNNNRTG	2 cut(s)	98, 666
SmlI	CTYRAG	4 cut(s)	131, 225, 608, 830
SmoI	CTYRAG	4 cut(s)	131, 225, 608, 830
Sse9I	AATT	9 cut(s)	43, 67, 144, 418, 818, 1047, 1245, 1334, 1499
SseBI	AGGCCT	2 cut(s)	223, 582
SsiI	CCGC	9 cut(s)	111, 141, 169, 208, 285, 329, 478, 488, 681
SspMI	CTAG	4 cut(s)	773, 851, 1271, 1650
SstI	GAGCTC	2 cut(s)	627, 1239
StuI	AGGCCT	2 cut(s)	223, 582
StyD4I	CCNGG	2 cut(s)	981, 1357
TaaI	ACNGT	5 cut(s)	692, 700, 712, 1371, 1400
TaqI	TCGA	1 cut(s)	1162
TasI	AATT	9 cut(s)	43, 67, 144, 418, 818, 1047, 1245, 1334, 1499
TatI	WGTACW	2 cut(s)	23, 1400
TauI	GCSGC	2 cut(s)	143, 481
TfiI	GAWTC	4 cut(s)	457, 568, 1033, 1058
Tru1I	TTAA	6 cut(s)	246, 609, 732, 831, 911, 1514
Tru9I	TTAA	6 cut(s)	246, 609, 732, 831, 911, 1514
TscAI	CASTG	6 cut(s)	283, 507, 814, 849, 1030, 1083
TseFI	GTSAC	1 cut(s)	1217
TseI	GCWGC	7 cut(s)	287, 341, 386, 717, 794, 797, 1133
Tsp45I	GTSAC	1 cut(s)	1217
TspDTI	ATGAA	6 cut(s)	150, 530, 852, 905, 1245, 1496
TspGWI	ACGGA	1 cut(s)	1106
TspRI	CASTG	6 cut(s)	283, 507, 814, 849, 1030, 1083
Vha464I	CTTAAG	2 cut(s)	608, 830
VneI	GTGCAC	1 cut(s)	1317
VpaK11BI	GGWCC	1 cut(s)	933
XapI	RAATTY	4 cut(s)	67, 818, 1047, 1334
XbaI	TCTAGA	2 cut(s)	772, 1649
XceI	RCATGY	1 cut(s)	1530
XcmI	CCANNNNNNNNNTGG	2 cut(s)	418, 1577
XmiI	GTMKAC	1 cut(s)	646
XmnI	GAANNNNTTC	1 cut(s)	582
XspI	CTAG	4 cut(s)	773, 851, 1271, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.