Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002669

Physical Location & Seq

Genomic Coordinates Forward (+)

45651389 .. 45663718

Gene Structure 12330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1373800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGGTTTGGGCGGGACGACCTTGCAAACTCTGAAGCTCGCCCCAATTCCTCCACCTTCCTTTTCTTCTTCTTTCCGCTCCGTTTTCAAACCGTTTTCCCAAACCTTTCTCTGCCGCCATAGCCGCAGACAAAGACTTCCACTTCCTCCGCCCTTCTTCGTCAGAGGCCTTTCAGCCCCGGCTGCACAGGCAACTGCCACCGCAGCCCCAAAAGAAACAAGCCCAGATGAAAAGGGTGTGAAGCAGCAATGGAAAGCAGCGATAGACTTCAAGTGGATAAGGGACAACAAGGATGCTGTTGCGGCCAACATAGAGAAGAGGAACTCCAATGCCAATTTGGAACTTGTGCTTGAGCTCTACCACAAAATGCTCAATCTTCAAAAGGAAGTTGAACGGCTTCGCGGGGAAAGGAATGTGGTTGCAAACAAGATGAAAGGAAAGTTGGAGCCATCCGAGCGTCAAAAACTTATAGATGAAGGAAAGAATTTGAAGGAAGGGCTTCTTTCTTTGGAAGAAGACCTGCTTAAACTTACTGATGAGCTTCAGCAGGAAGCACAACGTATACCAAATATGACTCATCCTGATGTCCCGATAGGCGGAGAGGATTTTTCAACCATAATAAAGATGGTAGGTAGCCCACGTGAGTTTAGCTTTCCTGTCAAGGATCACCTTCAACTTGGAAAGGAACTAGATCTTTTTGATTTTGATGCTGCTTCAGAGGTCAGTGGCTCAAAGTTTTACTATCTGAAGAATGAAGCAGTGCTCCTAGAGATGGCCCTTATTAACTGGACGCTAGTGGAAGTAATGAAAAGGGGCTTCACACCTTTAACAACCCCGGAAATTGTAAGATCCTCCATTGTTGAAAAATGTGGTTTCCAACCCCGAGGAGCAAATACCCAGGTTTATTCTATCGAGGATAGTGATCAATGCCTCATCGGCACTGCAGAGATTCCTGTTGGTGGAATTCATATGGATTCTATTCTTGCTGCATCATTGTTACCTTTGAAATATGTGGCAGTTTCCCATTGCTTCCGTACCGAGGCAGGCGCTGCAGGTACAGCATCAAGGGGTCTGTATCGAGTCCACCAATTCAGCAAGCTGGAGATGTTTATATTATGCCGACCAGAGGAAAGTGATTTCTACCATGAAGAACTCATAAGAATTGAAGAAGACCTATTCTCATCACTAGGATTACACTACAAAACTTTGGACATGGCATCTGGGGATTTAGGTGCACCTGCTTATCGTAAATTTGATATTGAGGCATGGATGCCTGGCTTAGCAAGATATGGGGAGATATCAAGTGCATCAAACTGTACAGACTATCAAAGTCGTCGTCTTGGGATCCGGTTTCGTTCTACAGAACCAGCATTAACAAATCCTAAGAAGGGTAAAAGCAACCTCGCTCCACCACAGTTTGTTCACACACTGAATGCAACGGCCTGTGCGGTACCACGAATGATCGTATGCATACTTGAGAACAACCAGCAAGAAGACGGCTCTGTCATTATCCCTGAGCCATTGAGGCCCCTTATGGGCGGACTTGAGTCCATATATCCCAAACCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004828 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006434 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Seryl_tRNA_N tRNA-synt_2b

Protein Analysis

524

Amino Acids

58.38

Weight (kDa)

6.82

Isoelectric Point (pI)

55.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seryl_tRNA_N	PF02403	88 - 191	9.9e-20	Seryl-tRNA synthetase N-terminal domain
tRNA-synt_2b	PF00587	306 - 495	4.3e-30	tRNA synthetase class II core domain (G, H, P, S and T)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870
fragaria_vesca	FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670
malus_domestica	MD08G1187900.v1.1 MD15G1373800.v1.1
prunus_persica	Prupe.1G522400_v2.0.a1 Prupe.1G522400_v2.0.a1
pyrus_communis	pycom08g16120 pycom15g33480 pycom15g33490
rosa_chinensis	RchiOBHm_Chr7g0242571
rosa_laevigata	RLG00000000891
rosa_multiflora	Rmu_sc0000429.1_g000097
rosa_roxburghii	Rroxscaffold_3G00222620
rosa_rugosa	Rorug07G0315500 Rorug07G0315600 Rorug07G0315700 Rorug07G0315800
rosa_samantha	Rh7AG470900 Rh7BG441200 Rh7CG487800 Rh7DG456400
rosa_wichuraiana	Rw0G005480 Rw7G039270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1246
AasI	GACNNNNNNGTC	1 cut(s)	1502
Acc36I	ACCTGC	3 cut(s)	528, 1043, 1246
Acc65I	GGTACC	1 cut(s)	1450
AccB1I	GGYRCC	1 cut(s)	1450
AccBSI	CCGCTC	1 cut(s)	78
AccI	GTMKAC	1 cut(s)	562
AccII	CGCG	1 cut(s)	402
AclWI	GGATC	4 cut(s)	672, 843, 1339, 1352
AcoI	YGGCCR	1 cut(s)	303
AcsI	RAATTY	3 cut(s)	484, 963, 1250
AcuI	CTGAAG	4 cut(s)	53, 527, 699, 767
AcvI	CACGTG	1 cut(s)	641
AfaI	GTAC	4 cut(s)	1036, 1057, 1318, 1452
AfiI	CCNNNNNNNGG	7 cut(s)	596, 772, 959, 1039, 1126, 1388, 1535
AjnI	CCWGG	2 cut(s)	897, 1273
AjuI	GAANNNNNNNTTGG	2 cut(s)	425, 457
AluBI	AGCT	5 cut(s)	37, 355, 541, 651, 1099
AluI	AGCT	5 cut(s)	37, 355, 541, 651, 1099
Alw21I	GWGCWC	3 cut(s)	357, 765, 1237
Alw44I	GTGCAC	1 cut(s)	1233
AlwI	GGATC	4 cut(s)	672, 843, 1339, 1352
AlwNI	CAGNNNCTG	1 cut(s)	1049
Ama87I	CYCGRG	1 cut(s)	882
AoxI	GGCC	5 cut(s)	166, 303, 774, 1440, 1526
ApaLI	GTGCAC	1 cut(s)	1233
ApeKI	GCWGC	7 cut(s)	182, 203, 244, 257, 710, 986, 1049
ApoI	RAATTY	3 cut(s)	484, 963, 1250
ArsI	GACNNNNNNTTYG	2 cut(s)	1321, 1353
Asp700I	GAANNNNTTC	2 cut(s)	396, 498
Asp718I	GGTACC	1 cut(s)	1450
AspLEI	GCGC	1 cut(s)	1049
AspS9I	GGNCC	2 cut(s)	775, 1527
AsuC2I	CCSGG	2 cut(s)	179, 836
AsuHPI	GGTGA	1 cut(s)	659
AvaI	CYCGRG	1 cut(s)	882
BaeGI	GKGCMC	1 cut(s)	1237
BamHI	GGATCC	1 cut(s)	1344
BanI	GGYRCC	1 cut(s)	1450
BanII	GRGCYC	1 cut(s)	357
BbrPI	CACGTG	1 cut(s)	641
BbsI	GAAGAC	3 cut(s)	522, 1176, 1500
Bbv12I	GWGCWC	3 cut(s)	357, 765, 1237
BbvI	GCAGC	7 cut(s)	169, 215, 256, 269, 697, 973, 1036
BccI	CCATC	3 cut(s)	457, 619, 766
BceAI	ACGGC	3 cut(s)	410, 1455, 1513
BciT130I	CCWGG	2 cut(s)	899, 1275
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	2 cut(s)	179, 836
BfaI	CTAG	5 cut(s)	689, 767, 794, 1187, 1566
BfmI	CTRYAG	3 cut(s)	942, 1050, 1359
BfoI	RGCGCY	1 cut(s)	1050
BfuAI	ACCTGC	3 cut(s)	528, 1043, 1246
BglI	GCCNNNNNGGC	2 cut(s)	936, 1525
BglII	AGATCT	1 cut(s)	691
BlpI	GCTNAGC	1 cut(s)	1279
Bme1390I	CCNGG	4 cut(s)	179, 836, 899, 1275
BmeT110I	CYCGRG	1 cut(s)	882
BmgT120I	GGNCC	2 cut(s)	775, 1527
BmiI	GGNNCC	4 cut(s)	447, 1346, 1452, 1529
BmrFI	CCNGG	4 cut(s)	179, 836, 899, 1275
BmsI	GCATC	7 cut(s)	283, 697, 998, 1070, 1226, 1260, 1316
BoxI	GACNNNNGTC	1 cut(s)	1546
BpiI	GAAGAC	3 cut(s)	522, 1176, 1500
BpmI	CTGGAG	1 cut(s)	1121
Bpu10I	CCTNAGC	1 cut(s)	1515
Bpu1102I	GCTNAGC	1 cut(s)	1279
BpuEI	CTTGAG	3 cut(s)	371, 1496, 1565
BpuMI	CCSGG	2 cut(s)	179, 836
BsaAI	YACGTR	1 cut(s)	641
BsaBI	GATNNNNATC	1 cut(s)	921
BsaJI	CCNNGG	5 cut(s)	177, 834, 883, 897, 1038
BsaWI	WCCGGW	1 cut(s)	1347
Bsc4I	CCNNNNNNNGG	7 cut(s)	596, 772, 959, 1039, 1126, 1388, 1535
Bse1I	ACTGG	1 cut(s)	791
Bse3DI	GCAATG	2 cut(s)	254, 1024
Bse8I	GATNNNNATC	1 cut(s)	921
BseBI	CCWGG	2 cut(s)	899, 1275
BseDI	CCNNGG	5 cut(s)	177, 834, 883, 897, 1038
BseGI	GGATG	4 cut(s)	298, 449, 577, 1275
BseJI	GATNNNNATC	1 cut(s)	921
BseLI	CCNNNNNNNGG	7 cut(s)	596, 772, 959, 1039, 1126, 1388, 1535
BseMI	GCAATG	2 cut(s)	254, 1024
BseMII	CTCAG	1 cut(s)	1506
BseNI	ACTGG	1 cut(s)	791
BseRI	GAGGAG	1 cut(s)	900
BseSI	GKGCMC	1 cut(s)	1237
BseXI	GCAGC	7 cut(s)	169, 215, 256, 269, 697, 973, 1036
BsgI	GTGCAG	1 cut(s)	168
Bsh1236I	CGCG	1 cut(s)	402
BshFI	GGCC	5 cut(s)	168, 305, 776, 1442, 1528
BshNI	GGYRCC	1 cut(s)	1450
BsiHKAI	GWGCWC	3 cut(s)	357, 765, 1237
BsiHKCI	CYCGRG	1 cut(s)	882
BsiSI	CCGG	3 cut(s)	179, 836, 1348
BslFI	GGGAC	3 cut(s)	28, 296, 572
BslI	CCNNNNNNNGG	7 cut(s)	596, 772, 959, 1039, 1126, 1388, 1535
BsmFI	GGGAC	3 cut(s)	28, 296, 572
BsmI	GAATGC	1 cut(s)	1438
BsnI	GGCC	5 cut(s)	168, 305, 776, 1442, 1528
BsoBI	CYCGRG	1 cut(s)	882
Bsp1286I	GDGCHC	3 cut(s)	357, 765, 1237
Bsp1407I	TGTACA	1 cut(s)	1316
Bsp143I	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
Bsp1720I	GCTNAGC	1 cut(s)	1279
BspANI	GGCC	5 cut(s)	168, 305, 776, 1442, 1528
BspCNI	CTCAG	1 cut(s)	1507
BspFNI	CGCG	1 cut(s)	402
BspLI	GGNNCC	4 cut(s)	447, 1346, 1452, 1529
BspMAI	CTGCAG	2 cut(s)	946, 1054
BspMI	ACCTGC	3 cut(s)	528, 1043, 1246
BspPI	GGATC	4 cut(s)	672, 843, 1339, 1352
BspT107I	GGYRCC	1 cut(s)	1450
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	2 cut(s)	254, 1024
BsrGI	TGTACA	1 cut(s)	1316
BsrI	ACTGG	1 cut(s)	791
BssECI	CCNNGG	5 cut(s)	177, 834, 883, 897, 1038
BssMI	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
BssNAI	GTATAC	1 cut(s)	563
Bst1107I	GTATAC	1 cut(s)	563
Bst2UI	CCWGG	2 cut(s)	899, 1275
Bst4CI	ACNGT	3 cut(s)	93, 1316, 1416
Bst6I	CTCTTC	1 cut(s)	311
BstAPI	GCANNNNNTGC	1 cut(s)	1049
BstAUI	TGTACA	1 cut(s)	1316
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	3 cut(s)	39, 1045, 1097
BstDEI	CTNAG	3 cut(s)	1279, 1383, 1515
BstF5I	GGATG	4 cut(s)	298, 449, 577, 1275
BstFNI	CGCG	1 cut(s)	402
BstH2I	RGCGCY	1 cut(s)	1050
BstHHI	GCGC	1 cut(s)	1049
BstKTI	GATC	6 cut(s)	667, 694, 851, 925, 1347, 1464
BstMBI	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
BstNI	CCWGG	2 cut(s)	899, 1275
BstPAI	GACNNNNGTC	1 cut(s)	1546
BstSCI	CCNGG	4 cut(s)	177, 834, 897, 1273
BstSFI	CTRYAG	3 cut(s)	942, 1050, 1359
BstSLI	GKGCMC	1 cut(s)	1237
BstUI	CGCG	1 cut(s)	402
BstV1I	GCAGC	7 cut(s)	169, 215, 256, 269, 697, 973, 1036
BstV2I	GAAGAC	3 cut(s)	522, 1176, 1500
BstX2I	RGATCY	3 cut(s)	691, 848, 1344
BstYI	RGATCY	3 cut(s)	691, 848, 1344
BstZ17I	GTATAC	1 cut(s)	563
BsuRI	GGCC	5 cut(s)	168, 305, 776, 1442, 1528
BtsCI	GGATG	4 cut(s)	298, 449, 577, 1275
BtsI	GCAGTG	2 cut(s)	765, 939
BtsIMutI	CAGTG	4 cut(s)	730, 765, 939, 1427
BveI	ACCTGC	3 cut(s)	528, 1043, 1246
Cac8I	GCNNGC	3 cut(s)	39, 1045, 1097
CaiI	CAGNNNCTG	1 cut(s)	1049
CfoI	GCGC	1 cut(s)	1049
Cfr13I	GGNCC	2 cut(s)	775, 1527
CseI	GACGC	2 cut(s)	446, 799
Csp6I	GTAC	4 cut(s)	1035, 1056, 1317, 1451
CviAII	CATG	3 cut(s)	1145, 1213, 1266
CviQI	GTAC	4 cut(s)	1035, 1056, 1317, 1451
DdeI	CTNAG	3 cut(s)	1279, 1383, 1515
DpnI	GATC	6 cut(s)	666, 693, 850, 924, 1346, 1463
DpnII	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
DrdI	GACNNNNNNGTC	1 cut(s)	1502
DseDI	GACNNNNNNGTC	1 cut(s)	1502
EaeI	YGGCCR	1 cut(s)	303
Eam1104I	CTCTTC	1 cut(s)	311
EarI	CTCTTC	1 cut(s)	311
EciI	GGCGGA	3 cut(s)	138, 612, 1554
Ecl136II	GAGCTC	1 cut(s)	355
Eco147I	AGGCCT	1 cut(s)	168
Eco24I	GRGCYC	1 cut(s)	357
Eco32I	GATATC	1 cut(s)	1299
Eco53kI	GAGCTC	1 cut(s)	355
Eco57I	CTGAAG	4 cut(s)	53, 527, 699, 767
Eco72I	CACGTG	1 cut(s)	641
Eco88I	CYCGRG	1 cut(s)	882
EcoICRI	GAGCTC	1 cut(s)	355
EcoO109I	RGGNCCY	1 cut(s)	1527
EcoRI	GAATTC	1 cut(s)	963
EcoRII	CCWGG	2 cut(s)	897, 1273
EcoRV	GATATC	1 cut(s)	1299
EcoT22I	ATGCAT	1 cut(s)	1472
EcoT38I	GRGCYC	1 cut(s)	357
FaeI	CATG	3 cut(s)	1148, 1216, 1269
FalI	AAGNNNNNCTT	4 cut(s)	486, 518, 507, 539
FaqI	GGGAC	3 cut(s)	28, 296, 572
FatI	CATG	3 cut(s)	1144, 1212, 1265
FauI	CCCGC	2 cut(s)	5, 395
FauNDI	CATATG	1 cut(s)	969
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	1 cut(s)	562
FokI	GGATG	4 cut(s)	305, 436, 564, 1282
FriOI	GRGCYC	1 cut(s)	357
FspBI	CTAG	5 cut(s)	689, 767, 794, 1187, 1566
GlaI	GCGC	1 cut(s)	1048
GsuI	CTGGAG	1 cut(s)	1121
HaeII	RGCGCY	1 cut(s)	1050
HaeIII	GGCC	5 cut(s)	168, 305, 776, 1442, 1528
HapII	CCGG	3 cut(s)	179, 836, 1348
HgaI	GACGC	2 cut(s)	446, 799
HhaI	GCGC	1 cut(s)	1049
Hin1II	CATG	3 cut(s)	1148, 1216, 1269
Hin6I	GCGC	1 cut(s)	1047
HinP1I	GCGC	1 cut(s)	1047
HinfI	GANTC	5 cut(s)	574, 949, 974, 1080, 1547
HpaII	CCGG	3 cut(s)	179, 836, 1348
HphI	GGTGA	1 cut(s)	659
Hpy166II	GTNNAC	4 cut(s)	563, 1084, 1235, 1423
Hpy188I	TCNGA	5 cut(s)	33, 164, 454, 718, 747
Hpy188III	TCNNGA	2 cut(s)	581, 589
Hpy8I	GTNNAC	4 cut(s)	563, 1084, 1235, 1423
Hpy99I	CGWCG	1 cut(s)	1338
HpyAV	CCTTC	7 cut(s)	66, 163, 470, 484, 488, 680, 1381
HpyCH4III	ACNGT	3 cut(s)	93, 1316, 1416
HpyCH4IV	ACGT	2 cut(s)	559, 640
HpyF3I	CTNAG	3 cut(s)	1279, 1383, 1515
HpySE526I	ACGT	2 cut(s)	559, 640
Hsp92II	CATG	3 cut(s)	1148, 1216, 1269
HspAI	GCGC	1 cut(s)	1047
KpnI	GGTACC	1 cut(s)	1454
Ksp22I	TGATCA	1 cut(s)	922
Kzo9I	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
LmnI	GCTCC	5 cut(s)	83, 445, 768, 887, 1411
Lsp1109I	GCAGC	7 cut(s)	169, 215, 256, 269, 697, 973, 1036
LweI	GCATC	7 cut(s)	283, 697, 998, 1070, 1226, 1260, 1316
MaeI	CTAG	5 cut(s)	689, 767, 794, 1187, 1566
MaeII	ACGT	2 cut(s)	559, 640
MaeIII	GTNAC	1 cut(s)	996
MalI	GATC	6 cut(s)	666, 693, 850, 924, 1346, 1463
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
MflI	RGATCY	3 cut(s)	691, 848, 1344
MhlI	GDGCHC	3 cut(s)	357, 765, 1237
MluCI	AATT	8 cut(s)	45, 334, 484, 840, 963, 1088, 1161, 1250
MlyI	GAGTC	3 cut(s)	568, 1089, 1556
MmeI	TCCRAC	2 cut(s)	423, 901
Mph1103I	ATGCAT	1 cut(s)	1472
MroXI	GAANNNNTTC	2 cut(s)	396, 498
MseI	TTAA	4 cut(s)	525, 783, 827, 1373
MslI	CAYNNNNRTG	1 cut(s)	582
MspI	CCGG	3 cut(s)	179, 836, 1348
MspR9I	CCNGG	4 cut(s)	179, 836, 899, 1275
Mva1269I	GAATGC	1 cut(s)	1438
MvaI	CCWGG	2 cut(s)	899, 1275
MvnI	CGCG	1 cut(s)	402
NciI	CCSGG	2 cut(s)	179, 836
NdeI	CATATG	1 cut(s)	969
NdeII	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
NlaIII	CATG	3 cut(s)	1148, 1216, 1269
NlaIV	GGNNCC	4 cut(s)	447, 1346, 1452, 1529
NsiI	ATGCAT	1 cut(s)	1472
PaqCI	CACCTGC	1 cut(s)	1246
PceI	AGGCCT	1 cut(s)	168
PctI	GAATGC	1 cut(s)	1438
PdmI	GAANNNNTTC	2 cut(s)	396, 498
PfeI	GAWTC	2 cut(s)	949, 974
PleI	GAGTC	3 cut(s)	568, 1088, 1555
PmaCI	CACGTG	1 cut(s)	641
PmlI	CACGTG	1 cut(s)	641
PpsI	GAGTC	3 cut(s)	568, 1088, 1555
Ppu21I	YACGTR	1 cut(s)	641
PshAI	GACNNNNGTC	1 cut(s)	1546
Psp124BI	GAGCTC	1 cut(s)	357
Psp6I	CCWGG	2 cut(s)	897, 1273
PspCI	CACGTG	1 cut(s)	641
PspGI	CCWGG	2 cut(s)	897, 1273
PspN4I	GGNNCC	4 cut(s)	447, 1346, 1452, 1529
PspPI	GGNCC	2 cut(s)	775, 1527
PstI	CTGCAG	2 cut(s)	946, 1054
PstNI	CAGNNNCTG	1 cut(s)	1049
PsuI	RGATCY	3 cut(s)	691, 848, 1344
RsaI	GTAC	4 cut(s)	1036, 1057, 1318, 1452
RsaNI	GTAC	4 cut(s)	1035, 1056, 1317, 1451
RseI	CAYNNNNRTG	1 cut(s)	582
SacI	GAGCTC	1 cut(s)	357
SaqAI	TTAA	4 cut(s)	525, 783, 827, 1373
Sau3AI	GATC	6 cut(s)	664, 691, 848, 922, 1344, 1461
Sau96I	GGNCC	2 cut(s)	775, 1527
SchI	GAGTC	3 cut(s)	568, 1089, 1556
ScrFI	CCNGG	4 cut(s)	179, 836, 899, 1275
SduI	GDGCHC	3 cut(s)	357, 765, 1237
SfaNI	GCATC	7 cut(s)	283, 697, 998, 1070, 1226, 1260, 1316
SfcI	CTRYAG	3 cut(s)	942, 1050, 1359
SmiMI	CAYNNNNRTG	1 cut(s)	582
SmlI	CTYRAG	3 cut(s)	350, 1475, 1544
SmoI	CTYRAG	3 cut(s)	350, 1475, 1544
Sse9I	AATT	8 cut(s)	45, 334, 484, 840, 963, 1088, 1161, 1250
SseBI	AGGCCT	1 cut(s)	168
SspMI	CTAG	5 cut(s)	689, 767, 794, 1187, 1566
SstI	GAGCTC	1 cut(s)	357
StuI	AGGCCT	1 cut(s)	168
StyD4I	CCNGG	4 cut(s)	177, 834, 897, 1273
TaaI	ACNGT	3 cut(s)	93, 1316, 1416
TaiI	ACGT	2 cut(s)	562, 643
TaqI	TCGA	2 cut(s)	912, 1078
TasI	AATT	8 cut(s)	45, 334, 484, 840, 963, 1088, 1161, 1250
TatI	WGTACW	1 cut(s)	1316
TauI	GCSGC	3 cut(s)	117, 126, 305
TfiI	GAWTC	2 cut(s)	949, 974
Tru1I	TTAA	4 cut(s)	525, 783, 827, 1373
Tru9I	TTAA	4 cut(s)	525, 783, 827, 1373
TscAI	CASTG	4 cut(s)	730, 765, 946, 1434
TseI	GCWGC	7 cut(s)	182, 203, 244, 257, 710, 986, 1049
TspDTI	ATGAA	7 cut(s)	243, 446, 489, 768, 821, 956, 1161
TspGWI	ACGGA	2 cut(s)	70, 1022
TspRI	CASTG	4 cut(s)	730, 765, 946, 1434
VneI	GTGCAC	1 cut(s)	1233
XapI	RAATTY	3 cut(s)	484, 963, 1250
XcmI	CCANNNNNNNNNTGG	2 cut(s)	334, 622
XmiI	GTMKAC	1 cut(s)	562
XmnI	GAANNNNTTC	2 cut(s)	396, 498
XspI	CTAG	5 cut(s)	689, 767, 794, 1187, 1566
Zsp2I	ATGCAT	1 cut(s)	1472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.