Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002669

Physical Location & Seq

Genomic Coordinates Forward (+)

5640019 .. 5645046

Gene Structure 5028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00222620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGGTTTTGGCGGGACTACCTTACAAACCCTCAAGCTCGCCGCAATTCCTTCACCTTCTTCTTCTTTCCGCTCCGTTTTCAAACCATTATCCAAAACCATCCTCTACCGCCATAGCCACACACAAAGGCCTCAAGCTCCTCTCTTCTTCGTTAAGGGTTTCTCAGTCTCGGCCGTACAAGCCACTGCCCCCGCAGCACCAAAAGCAACAAGCCCAGATGAGAAAGGTGTGAAACCGCAATGGAAAGCTGCGATAGATTTCAAGTGGATAAGGGAGAACAAGGATGCTGTTGCTGCCAATATAAAGAAGAGGAACTCCAATGCCAATTTGGAACTTGTGCTTCAGCTCTACAATAAAATGTTGAATCTTCAAAAGGAAGTTGAGCGGCTTCGTGCGGAAAGGAATGCAGTGGCAAACAAGATGAAAGGGAAGTTGGAACCCTCAGAGCGTCAAAAACTCATAGAGGAAGGTAAGAATCTGAAGGAAGGCCTTCTTACATTGGAAGAAGACCTGCTTAAGCTTATTGATGAGCTCCAACAGGAAGCACAATGTATACCAAATATGACTCATCCGGATGTCCCAATAGGCGGGGATGACAGTTCAACTGTTAGAAAGACGGTAGGCAGCCCTTGCGAGTTTAACTTTCCTATCAAGGATCACCTTCAACTTGGAAAGGATCTAGATCTTTTTGATTTTGATGCTGCTGCAGAGGTCAGTGGCTCAAAATTCTACTATCTTAAGAATGAAGCAGTGATGCTAGAGATGGGTCTTATCAACTGGACGCTCTTGGAAGTCATGAAACGGGGCTTCACACCTTTAACAACCCCAGAGATTGTAAGGTCCTCTGTTGTTGAAAAATGTGGTTTCCAACCCCGTGGAGCAAATACCCAGGTTTATTCTATTGAGGGTAGTGATCAATGCCTCATCGGCACTGCAGAGATTCCTGTTGGGGGAATTCACATGGATTCTATTCTTTCTGCATCAGTGTTACCTTTGAAATATGTGGCAGTCTCCCATTGCTTCCGTACTGAGGCAGGTGCTGCTGGTTCAGCAACAAGGGGTCTATATCGAGTCCACCAGTTCAGCAAGTTGGAGATGTTTATATTATGCCGACCAGAGGAGAGTGACTTTTACCATGAAGAGCTCATAAAAATTGAAGAAGATCTGTTCTCATCACTAGGATTACATTATAAAACTCTGGACATGGCATCTGGGGATTTAGGTGCACCGGCTTATCGTAAATTTGATATTGAGGCATGGATGCCTGGTTTAGCGCGGTTTGGTGAGATATCAAGCGCATCAAACTGTACAGACTACCAAAGTCGCCGTCTTGGGATCCGGTATCGTTCTTCAGAACCAGCATCTACAAATCCTAAAAAGGGTAAAGGCAACCTCTCTCCACTACAATTTGTTCATACATTAAATGCAACAGCATGTGCAGTACCACGAATGATCGTCTGCCTGCTGGAAAATAACCAGCAAGAAGATGGCTCTGTCGTTATTCCTGAGCCATTGAGGCCATTTATGGGTGGCATAGAGCATATACAACCTAAATCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004828 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006434 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Seryl_tRNA_N tRNA-synt_2b

Protein Analysis

520

Amino Acids

57.66

Weight (kDa)

7.97

Isoelectric Point (pI)

52.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seryl_tRNA_N	PF02403	85 - 188	2.3e-20	Seryl-tRNA synthetase N-terminal domain
tRNA-synt_2b	PF00587	304 - 492	3.3e-30	tRNA synthetase class II core domain (G, H, P, S and T)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002669)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870 AT1G11870
fragaria_vesca	FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670 FvH4_5g36670
malus_domestica	MD08G1187900.v1.1 MD15G1373800.v1.1
prunus_persica	Prupe.1G522400_v2.0.a1 Prupe.1G522400_v2.0.a1
pyrus_communis	pycom08g16120 pycom15g33480 pycom15g33490
rosa_chinensis	RchiOBHm_Chr7g0242571
rosa_laevigata	RLG00000000891
rosa_multiflora	Rmu_sc0000429.1_g000097
rosa_roxburghii	Rroxscaffold_3G00222620
rosa_rugosa	Rorug07G0315500 Rorug07G0315600 Rorug07G0315700 Rorug07G0315800
rosa_samantha	Rh7AG470900 Rh7BG441200 Rh7CG487800 Rh7DG456400
rosa_wichuraiana	Rw0G005480 Rw7G039270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1191
AarI	CACCTGC	1 cut(s)	1025
Acc36I	ACCTGC	2 cut(s)	519, 1025
AccBSI	CCGCTC	2 cut(s)	72, 385
AccI	GTMKAC	1 cut(s)	553
AccII	CGCG	1 cut(s)	1276
AccIII	TCCGGA	1 cut(s)	571
AclWI	GGATC	4 cut(s)	663, 684, 1330, 1343
AcoI	YGGCCR	1 cut(s)	171
AcsI	RAATTY	3 cut(s)	725, 954, 1241
AcuI	CTGAAG	3 cut(s)	326, 500, 1335
AfaI	GTAC	4 cut(s)	177, 1027, 1309, 1443
AfiI	CCNNNNNNNGG	6 cut(s)	587, 950, 1030, 1117, 1379, 1526
AflII	CTTAAG	2 cut(s)	515, 737
AgsI	TTSAA	9 cut(s)	82, 262, 364, 371, 603, 665, 854, 997, 1157
AjnI	CCWGG	2 cut(s)	888, 1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	416, 448
AluBI	AGCT	7 cut(s)	37, 137, 248, 346, 520, 532, 1144
AluI	AGCT	7 cut(s)	37, 137, 248, 346, 520, 532, 1144
Alw21I	GWGCWC	3 cut(s)	534, 1146, 1228
Alw26I	GTCTC	2 cut(s)	172, 1015
Alw44I	GTGCAC	1 cut(s)	1224
AlwI	GGATC	4 cut(s)	663, 684, 1330, 1343
AlwNI	CAGNNNCTG	1 cut(s)	1040
Aor13HI	TCCGGA	1 cut(s)	571
AoxI	GGCC	4 cut(s)	128, 171, 487, 1517
ApaLI	GTGCAC	1 cut(s)	1224
ApeKI	GCWGC	7 cut(s)	194, 248, 293, 624, 701, 704, 1040
ApoI	RAATTY	3 cut(s)	725, 954, 1241
ArsI	GACNNNNNNTTYG	2 cut(s)	1312, 1344
Asp700I	GAANNNNTTC	1 cut(s)	489
AspLEI	GCGC	2 cut(s)	1276, 1298
AspS9I	GGNCC	1 cut(s)	840
AsuHPI	GGTGA	3 cut(s)	45, 650, 1295
AvaII	GGWCC	1 cut(s)	840
BaeGI	GKGCMC	1 cut(s)	1228
BamHI	GGATCC	1 cut(s)	1335
BanII	GRGCYC	2 cut(s)	534, 1146
BbsI	GAAGAC	1 cut(s)	513
Bbv12I	GWGCWC	3 cut(s)	534, 1146, 1228
BbvI	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BccI	CCATC	3 cut(s)	107, 757, 1481
BceAI	ACGGC	2 cut(s)	158, 1311
BciT130I	CCWGG	2 cut(s)	890, 1266
BclI	TGATCA	1 cut(s)	913
BcoDI	GTCTC	2 cut(s)	172, 1015
BfaI	CTAG	4 cut(s)	680, 758, 1178, 1557
BfmI	CTRYAG	2 cut(s)	705, 933
BfrI	CTTAAG	2 cut(s)	515, 737
BfuAI	ACCTGC	2 cut(s)	519, 1025
BglI	GCCNNNNNGGC	2 cut(s)	927, 1516
BglII	AGATCT	2 cut(s)	682, 1162
BisI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
BlsI	GCNGC	9 cut(s)	43, 196, 250, 295, 387, 626, 703, 706, 1042
Bme1390I	CCNGG	2 cut(s)	890, 1266
Bme18I	GGWCC	1 cut(s)	840
BmgT120I	GGNCC	1 cut(s)	840
BmiI	GGNNCC	2 cut(s)	438, 1337
BmrFI	CCNGG	2 cut(s)	890, 1266
BmsI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
BpiI	GAAGAC	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	1506
BpuEI	CTTGAG	2 cut(s)	17, 117
BsaBI	GATNNNNATC	1 cut(s)	681
BsaJI	CCNNGG	2 cut(s)	874, 888
BsaWI	WCCGGW	2 cut(s)	571, 1338
Bsc4I	CCNNNNNNNGG	6 cut(s)	587, 950, 1030, 1117, 1379, 1526
Bse118I	RCCGGY	1 cut(s)	1228
Bse1I	ACTGG	2 cut(s)	782, 1078
Bse3DI	GCAATG	2 cut(s)	245, 1015
Bse8I	GATNNNNATC	1 cut(s)	681
BseAI	TCCGGA	1 cut(s)	571
BseBI	CCWGG	2 cut(s)	890, 1266
BseDI	CCNNGG	2 cut(s)	874, 888
BseGI	GGATG	6 cut(s)	99, 289, 568, 580, 598, 1266
BseJI	GATNNNNATC	1 cut(s)	681
BseLI	CCNNNNNNNGG	6 cut(s)	587, 950, 1030, 1117, 1379, 1526
BseMI	GCAATG	2 cut(s)	245, 1015
BseMII	CTCAG	4 cut(s)	177, 456, 1020, 1497
BseNI	ACTGG	2 cut(s)	782, 1078
BseRI	GAGGAG	2 cut(s)	129, 1133
BseSI	GKGCMC	1 cut(s)	1228
BseX3I	CGGCCG	1 cut(s)	171
BseXI	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BsgI	GTGCAG	1 cut(s)	1458
Bsh1236I	CGCG	1 cut(s)	1276
Bsh1285I	CGRYCG	1 cut(s)	174
BshFI	GGCC	4 cut(s)	130, 173, 489, 1519
BsiEI	CGRYCG	1 cut(s)	174
BsiHKAI	GWGCWC	3 cut(s)	534, 1146, 1228
BsiSI	CCGG	3 cut(s)	572, 1229, 1339
BslFI	GGGAC	2 cut(s)	28, 563
BslI	CCNNNNNNNGG	6 cut(s)	587, 950, 1030, 1117, 1379, 1526
BsmAI	GTCTC	2 cut(s)	172, 1015
BsmFI	GGGAC	2 cut(s)	28, 563
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	4 cut(s)	130, 173, 489, 1519
Bsp1286I	GDGCHC	3 cut(s)	534, 1146, 1228
Bsp13I	TCCGGA	1 cut(s)	571
Bsp1407I	TGTACA	1 cut(s)	1307
Bsp143I	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BspANI	GGCC	4 cut(s)	130, 173, 489, 1519
BspCNI	CTCAG	4 cut(s)	176, 455, 1021, 1498
BspEI	TCCGGA	1 cut(s)	571
BspFNI	CGCG	1 cut(s)	1276
BspHI	TCATGA	1 cut(s)	795
BspLI	GGNNCC	2 cut(s)	438, 1337
BspMAI	CTGCAG	2 cut(s)	709, 937
BspMI	ACCTGC	2 cut(s)	519, 1025
BspPI	GGATC	4 cut(s)	663, 684, 1330, 1343
BspQI	GCTCTTC	1 cut(s)	1134
BspTI	CTTAAG	2 cut(s)	515, 737
BsrBI	CCGCTC	2 cut(s)	72, 385
BsrDI	GCAATG	2 cut(s)	245, 1015
BsrFI	RCCGGY	1 cut(s)	1228
BsrGI	TGTACA	1 cut(s)	1307
BsrI	ACTGG	2 cut(s)	782, 1078
BssAI	RCCGGY	1 cut(s)	1228
BssECI	CCNNGG	2 cut(s)	874, 888
BssMI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BssNAI	GTATAC	1 cut(s)	554
Bst1107I	GTATAC	1 cut(s)	554
Bst2UI	CCWGG	2 cut(s)	890, 1266
Bst4CI	ACNGT	4 cut(s)	599, 607, 619, 1307
Bst6I	CTCTTC	3 cut(s)	149, 302, 1134
BstAFI	CTTAAG	2 cut(s)	515, 737
BstAPI	GCANNNNNTGC	2 cut(s)	630, 1040
BstAUI	TGTACA	1 cut(s)	1307
BstC8I	GCNNGC	2 cut(s)	39, 1463
BstDEI	CTNAG	4 cut(s)	163, 442, 1029, 1506
BstDSI	CCRYGG	1 cut(s)	874
BstF5I	GGATG	6 cut(s)	99, 289, 568, 580, 598, 1266
BstFNI	CGCG	1 cut(s)	1276
BstHHI	GCGC	2 cut(s)	1276, 1298
BstKTI	GATC	7 cut(s)	658, 679, 685, 916, 1165, 1338, 1455
BstMAI	GTCTC	2 cut(s)	172, 1015
BstMBI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
BstMCI	CGRYCG	1 cut(s)	174
BstMWI	GCNNNNNNNGC	9 cut(s)	179, 194, 203, 293, 630, 927, 1040, 1049, 1516
BstNI	CCWGG	2 cut(s)	890, 1266
BstNSI	RCATGY	1 cut(s)	1437
BstSCI	CCNGG	2 cut(s)	888, 1264
BstSFI	CTRYAG	2 cut(s)	705, 933
BstSLI	GKGCMC	1 cut(s)	1228
BstUI	CGCG	1 cut(s)	1276
BstV1I	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
BstV2I	GAAGAC	1 cut(s)	513
BstX2I	RGATCY	4 cut(s)	676, 682, 1162, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	875
BstYI	RGATCY	4 cut(s)	676, 682, 1162, 1335
BstZ17I	GTATAC	1 cut(s)	554
BstZI	CGGCCG	1 cut(s)	171
BsuRI	GGCC	4 cut(s)	130, 173, 489, 1519
BtgI	CCRYGG	1 cut(s)	874
BtsCI	GGATG	6 cut(s)	99, 289, 568, 580, 598, 1266
BtsI	GCAGTG	4 cut(s)	183, 414, 756, 930
BtsIMutI	CAGTG	6 cut(s)	183, 414, 721, 756, 930, 990
BveI	ACCTGC	2 cut(s)	519, 1025
Cac8I	GCNNGC	2 cut(s)	39, 1463
CaiI	CAGNNNCTG	1 cut(s)	1040
CciI	TCATGA	1 cut(s)	795
CfoI	GCGC	2 cut(s)	1276, 1298
Cfr10I	RCCGGY	1 cut(s)	1228
Cfr13I	GGNCC	1 cut(s)	840
CseI	GACGC	2 cut(s)	437, 790
Csp6I	GTAC	4 cut(s)	176, 1026, 1308, 1442
CviAII	CATG	6 cut(s)	796, 961, 1136, 1204, 1257, 1434
CviQI	GTAC	4 cut(s)	176, 1026, 1308, 1442
DdeI	CTNAG	4 cut(s)	163, 442, 1029, 1506
DpnI	GATC	7 cut(s)	657, 678, 684, 915, 1164, 1337, 1454
DpnII	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
EaeI	YGGCCR	1 cut(s)	171
EagI	CGGCCG	1 cut(s)	171
Eam1104I	CTCTTC	3 cut(s)	149, 302, 1134
EarI	CTCTTC	3 cut(s)	149, 302, 1134
Ecl136II	GAGCTC	2 cut(s)	532, 1144
EclXI	CGGCCG	1 cut(s)	171
Eco147I	AGGCCT	2 cut(s)	130, 489
Eco24I	GRGCYC	2 cut(s)	534, 1146
Eco32I	GATATC	1 cut(s)	1290
Eco47I	GGWCC	1 cut(s)	840
Eco52I	CGGCCG	1 cut(s)	171
Eco53kI	GAGCTC	2 cut(s)	532, 1144
Eco57I	CTGAAG	3 cut(s)	326, 500, 1335
EcoICRI	GAGCTC	2 cut(s)	532, 1144
EcoO109I	RGGNCCY	1 cut(s)	840
EcoRI	GAATTC	1 cut(s)	954
EcoRII	CCWGG	2 cut(s)	888, 1264
EcoRV	GATATC	1 cut(s)	1290
EcoT38I	GRGCYC	2 cut(s)	534, 1146
FaeI	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
FalI	AAGNNNNNCTT	4 cut(s)	477, 509, 498, 530
FaqI	GGGAC	2 cut(s)	28, 563
FatI	CATG	6 cut(s)	795, 960, 1135, 1203, 1256, 1433
FauI	CCCGC	3 cut(s)	5, 199, 581
FbaI	TGATCA	1 cut(s)	913
FblI	GTMKAC	1 cut(s)	553
Fnu4HI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
FokI	GGATG	6 cut(s)	86, 296, 555, 587, 605, 1273
FriOI	GRGCYC	2 cut(s)	534, 1146
Fsp4HI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
FspBI	CTAG	4 cut(s)	680, 758, 1178, 1557
GlaI	GCGC	2 cut(s)	1275, 1297
GluI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
HaeIII	GGCC	4 cut(s)	130, 173, 489, 1519
HapII	CCGG	3 cut(s)	572, 1229, 1339
HgaI	GACGC	2 cut(s)	437, 790
HhaI	GCGC	2 cut(s)	1276, 1298
Hin1II	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
Hin6I	GCGC	2 cut(s)	1274, 1296
HinP1I	GCGC	2 cut(s)	1274, 1296
HindIII	AAGCTT	1 cut(s)	518
HinfI	GANTC	6 cut(s)	364, 475, 565, 940, 965, 1071
HpaII	CCGG	3 cut(s)	572, 1229, 1339
HphI	GGTGA	3 cut(s)	45, 650, 1295
Hpy166II	GTNNAC	3 cut(s)	554, 1075, 1226
Hpy188I	TCNGA	3 cut(s)	445, 480, 1354
Hpy188III	TCNNGA	6 cut(s)	572, 680, 796, 1199, 1505, 1557
Hpy8I	GTNNAC	3 cut(s)	554, 1075, 1226
HpyAV	CCTTC	7 cut(s)	60, 66, 461, 475, 479, 500, 671
HpyCH4III	ACNGT	4 cut(s)	599, 607, 619, 1307
HpyCH4V	TGCA	7 cut(s)	407, 707, 935, 980, 1226, 1427, 1439
HpyF10VI	GCNNNNNNNGC	9 cut(s)	179, 194, 203, 293, 630, 927, 1040, 1049, 1516
HpyF3I	CTNAG	4 cut(s)	163, 442, 1029, 1506
Hsp92II	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
HspAI	GCGC	2 cut(s)	1274, 1296
Kpn2I	TCCGGA	1 cut(s)	571
Ksp22I	TGATCA	1 cut(s)	913
Kzo9I	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
LguI	GCTCTTC	1 cut(s)	1134
LmnI	GCTCC	4 cut(s)	77, 142, 537, 878
Lsp1109I	GCAGC	7 cut(s)	206, 235, 280, 636, 688, 691, 1027
LweI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
MaeI	CTAG	4 cut(s)	680, 758, 1178, 1557
MaeIII	GTNAC	2 cut(s)	987, 1124
MalI	GATC	7 cut(s)	657, 678, 684, 915, 1164, 1337, 1454
MbiI	CCGCTC	2 cut(s)	72, 385
MboI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
MflI	RGATCY	4 cut(s)	676, 682, 1162, 1335
MhlI	GDGCHC	3 cut(s)	534, 1146, 1228
MluCI	AATT	7 cut(s)	45, 325, 725, 954, 1152, 1241, 1406
MlyI	GAGTC	2 cut(s)	559, 1080
MmeI	TCCRAC	4 cut(s)	414, 559, 892, 1071
MroI	TCCGGA	1 cut(s)	571
MroXI	GAANNNNTTC	1 cut(s)	489
MseI	TTAA	6 cut(s)	153, 516, 639, 738, 818, 1421
MslI	CAYNNNNRTG	1 cut(s)	573
MspCI	CTTAAG	2 cut(s)	515, 737
MspI	CCGG	3 cut(s)	572, 1229, 1339
MspR9I	CCNGG	2 cut(s)	890, 1266
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	2 cut(s)	890, 1266
MvnI	CGCG	1 cut(s)	1276
MwoI	GCNNNNNNNGC	9 cut(s)	179, 194, 203, 293, 630, 927, 1040, 1049, 1516
NdeII	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
NlaIII	CATG	6 cut(s)	799, 964, 1139, 1207, 1260, 1437
NlaIV	GGNNCC	2 cut(s)	438, 1337
NmeAIII	GCCGAG	1 cut(s)	149
NmuCI	GTSAC	1 cut(s)	1124
NspI	RCATGY	1 cut(s)	1437
PagI	TCATGA	1 cut(s)	795
PaqCI	CACCTGC	1 cut(s)	1025
PceI	AGGCCT	2 cut(s)	130, 489
PciSI	GCTCTTC	1 cut(s)	1134
PctI	GAATGC	1 cut(s)	409
PdmI	GAANNNNTTC	1 cut(s)	489
PfeI	GAWTC	4 cut(s)	364, 475, 940, 965
PkrI	GCNGC	9 cut(s)	43, 196, 250, 295, 387, 626, 703, 706, 1042
PleI	GAGTC	2 cut(s)	559, 1079
PpsI	GAGTC	2 cut(s)	559, 1079
PpuMI	RGGWCCY	1 cut(s)	840
PsiI	TTATAA	1 cut(s)	1191
Psp124BI	GAGCTC	2 cut(s)	534, 1146
Psp5II	RGGWCCY	1 cut(s)	840
Psp6I	CCWGG	2 cut(s)	888, 1264
PspGI	CCWGG	2 cut(s)	888, 1264
PspN4I	GGNNCC	2 cut(s)	438, 1337
PspPI	GGNCC	1 cut(s)	840
PspPPI	RGGWCCY	1 cut(s)	840
PstI	CTGCAG	2 cut(s)	709, 937
PstNI	CAGNNNCTG	1 cut(s)	1040
PsuI	RGATCY	4 cut(s)	676, 682, 1162, 1335
RsaI	GTAC	4 cut(s)	177, 1027, 1309, 1443
RsaNI	GTAC	4 cut(s)	176, 1026, 1308, 1442
RseI	CAYNNNNRTG	1 cut(s)	573
SacI	GAGCTC	2 cut(s)	534, 1146
SapI	GCTCTTC	1 cut(s)	1134
SaqAI	TTAA	6 cut(s)	153, 516, 639, 738, 818, 1421
SatI	GCNGC	9 cut(s)	42, 195, 249, 294, 386, 625, 702, 705, 1041
Sau3AI	GATC	7 cut(s)	655, 676, 682, 913, 1162, 1335, 1452
Sau96I	GGNCC	1 cut(s)	840
SchI	GAGTC	2 cut(s)	559, 1080
ScrFI	CCNGG	2 cut(s)	890, 1266
SduI	GDGCHC	3 cut(s)	534, 1146, 1228
SfaNI	GCATC	8 cut(s)	274, 688, 744, 989, 1217, 1251, 1307, 1370
SfcI	CTRYAG	2 cut(s)	705, 933
SinI	GGWCC	1 cut(s)	840
SmiMI	CAYNNNNRTG	1 cut(s)	573
SmlI	CTYRAG	4 cut(s)	32, 132, 515, 737
SmoI	CTYRAG	4 cut(s)	32, 132, 515, 737
Sse9I	AATT	7 cut(s)	45, 325, 725, 954, 1152, 1241, 1406
SseBI	AGGCCT	2 cut(s)	130, 489
SspMI	CTAG	4 cut(s)	680, 758, 1178, 1557
SstI	GAGCTC	2 cut(s)	534, 1146
StuI	AGGCCT	2 cut(s)	130, 489
StyD4I	CCNGG	2 cut(s)	888, 1264
TaaI	ACNGT	4 cut(s)	599, 607, 619, 1307
TaqI	TCGA	1 cut(s)	1069
TasI	AATT	7 cut(s)	45, 325, 725, 954, 1152, 1241, 1406
TatI	WGTACW	1 cut(s)	1307
TauI	GCSGC	2 cut(s)	44, 388
TfiI	GAWTC	4 cut(s)	364, 475, 940, 965
Tru1I	TTAA	6 cut(s)	153, 516, 639, 738, 818, 1421
Tru9I	TTAA	6 cut(s)	153, 516, 639, 738, 818, 1421
TscAI	CASTG	6 cut(s)	190, 414, 721, 756, 937, 990
TseFI	GTSAC	1 cut(s)	1124
TseI	GCWGC	7 cut(s)	194, 248, 293, 624, 701, 704, 1040
Tsp45I	GTSAC	1 cut(s)	1124
TspDTI	ATGAA	5 cut(s)	437, 759, 812, 1152, 1403
TspGWI	ACGGA	2 cut(s)	64, 1013
TspRI	CASTG	6 cut(s)	190, 414, 721, 756, 937, 990
Vha464I	CTTAAG	2 cut(s)	515, 737
VneI	GTGCAC	1 cut(s)	1224
VpaK11BI	GGWCC	1 cut(s)	840
XapI	RAATTY	3 cut(s)	725, 954, 1241
XbaI	TCTAGA	2 cut(s)	679, 1556
XceI	RCATGY	1 cut(s)	1437
XcmI	CCANNNNNNNNNTGG	2 cut(s)	325, 1484
XmiI	GTMKAC	1 cut(s)	553
XmnI	GAANNNNTTC	1 cut(s)	489
XspI	CTAG	4 cut(s)	680, 758, 1178, 1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.