FvH4_6g07510

Solute carrier family 40 member 3

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
4512722 .. 4517763
5042 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07510.t1

Sequence Viewer

Length: 1755 bp
ATGGCGTTGGCTTTTGGTTCATCTGTCACTCTCTCTCAGTATTCTCTCAATTTCAGTTCCTCTAGATTTCGCCATCGCTTTGCTTCTCGCCAATGGTTGAATTCGAACCATGTTTCTGTTGGTTCGCATAGATTTGAGGGTATTAACTCGAGGTGTTCAATAACCAACACTGATGTACACTTCAACCATGTGGCGACTGAAAGTGAGACCCAGGAGGAATCATCAGCTGTAGGGCCGGAGTGTTCGGTCCCAATTGTTCATCTTACATCTAATATCTTGGAGACTGAATCTTTGAGTTTACTAACTGGAGACACTTATGTGGACAGTCTCTTGACAACACTGCCTGTTTTGTCGAAAGAGGAGCAGCATACTCTTGCTGCTACTCCGGCCCATCCTATGGGATTATACGCTTTGTATGCTAGTTGTCTAGCTGGAAATTTGGTGGAACAATTTTGGAATTTCGCTTGGCCCTCTGCTATTGCATTGATATATCCAAGCCTTTTGCCAGTGGCCCTCATGGGTTTTGTTAGTAAGCTTGCAATAATTGCTGGAGGTCCTATAGTGGGTACTCTTATGGATCATTTACCCAGAGTGCCTGCCTATAACTGTCTTAATATTATCCAGGCAGCTGCGCAGTTATTATCTGCAGCAATGATAATTCGTGCTCATTCAGTTCCACCTTCTGCATCGTCCCTCCTTATCCGTCCCTGGTTCATTGTACTTGTATTAAGTGGAGCTGTAGAGAGGCTATCTGGTGTTGCATTAGGAGTTGCAGCGGAGCGTGATTGGGTGGTGCAGTTGGCAGGAGTGAACAGGCCTATTGCACTAGCACAAGCAAATGCCATTCTTAGTCGAATTGATCTACTCTCTGAGATAGCTGGGGCATCACTATTTGGCATTCTTATCTCGAAGTATGATCCAGTAACATGCTTGAAGTTTGCTACATGTTTAATGGTGTGGTCGTTGCCGTTTGCGGTGTTTCTCACGTGTTTAACCAACAAGCTTTCTAGTGGGGTTCTTGACCGCCCTAAGTGTTCACAAACCTGTTGTAGGACATCTACTGAAGGACCTCTACTGGATACCAACAATATAGTGGATAAAGGTGTTGAAGTTATTAAACTTGGATGGAAGGAATACTTACAGCAGCCAGTTCTTCCTGCAAGCCTAGCCTATGTCCTGCTTTATTTTAATGTTGTACTAACTCCAGGCAGTTTGATGACGGCATATCTAACACAGAGTGGTCTAAATCCATCTATCATTGGCGGTTTCAGTGGACTATGTGCCTTTATGGGTGTTGCAGCAACATTTGTGTCGGCTAGCCTGGTCAGGCGGCTTGGCATCTTAAAGGCTGGAGCAGCTGGGTTGATAATTCAGGCTTCACTTCTCACCGTAGCTGTGGCTGTTTATTGTAGTAGATCTGCTTCACAGCAAAGCCCCCTTCTTTTCTTCTTGTGCTTGATCGTATTGTCAAGGTTAGGACACATGTCATACGATGTGGTGGCTGCCCAGATTCTTCAAACTGGGATACCGCCATCTAAAGTAAATATCATTGGGACAACAGAAGTTGCTGTTGCTAGTCTGGCAGAGTCAGCAATGTTGGGAGTTGCGATTATTGCCAACGATGTTTCACATTTCGGATTTTTAGCAATGTTGTCACTGCTATCAGTAATTGCAGCAGCATGGATGTTCTGCCGGTGGTTGTTGAATCCAACAGATGAACAAAGAAGTCTTTTCTCATTTGATGCTCGCTGTTAA

Protein Analysis

585

Amino Acids

62.5

Weight (kDa)

6.85

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 135 - 556 1e-123 Ferroportin1 (FPN1)
MFS_1 PF07690 166 - 514 1.2e-08 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011217)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 633
AccB7I CCANNNNNTGG 1 cut(s) 397
AciI CCGC 6 cut(s) 776, 974, 1024, 1263, 1330, 1529
AclWI GGATC 2 cut(s) 585, 911
AcsI RAATTY 3 cut(s) 100, 436, 457
AcuI CTGAAG 1 cut(s) 1083
AcvI CACGTG 1 cut(s) 987
AdeI CACNNNGTG 1 cut(s) 1238
AfaI GTAC 4 cut(s) 177, 568, 720, 1197
AfiI CCNNNNNNNGG 3 cut(s) 397, 563, 1050
AflIII ACRYGT 3 cut(s) 944, 986, 1482
AgsI TTSAA 7 cut(s) 100, 159, 184, 934, 1109, 1517, 1705
AjnI CCWGG 5 cut(s) 210, 621, 707, 1204, 1320
AleI CACNNNNGTG 1 cut(s) 317
AluBI AGCT 9 cut(s) 227, 431, 535, 629, 737, 878, 1003, 1358, 1394
AluI AGCT 9 cut(s) 227, 431, 535, 629, 737, 878, 1003, 1358, 1394
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 4 cut(s) 200, 275, 303, 332
AlwI GGATC 2 cut(s) 585, 911
Ama87I CYCGRG 1 cut(s) 148
AoxI GGCC 5 cut(s) 233, 387, 467, 510, 815
ApoI RAATTY 3 cut(s) 100, 436, 457
ArsI GACNNNNNNTTYG 2 cut(s) 274, 306
AspLEI GCGC 1 cut(s) 634
AspS9I GGNCC 7 cut(s) 233, 247, 388, 468, 511, 554, 1067
AsuHPI GGTGA 1 cut(s) 1378
AsuII TTCGAA 1 cut(s) 104
AsuNHI GCTAGC 1 cut(s) 1316
AvaI CYCGRG 1 cut(s) 148
AvaII GGWCC 3 cut(s) 247, 554, 1067
BarI GAAGNNNNNNTAC 4 cut(s) 1056, 1088, 1405, 1437
BbrPI CACGTG 1 cut(s) 987
Bbv12I GWGCWC 1 cut(s) 667
BccI CCATC 5 cut(s) 81, 399, 1119, 1258, 1540
BceAI ACGGC 2 cut(s) 952, 1236
BciT130I CCWGG 5 cut(s) 212, 623, 709, 1206, 1322
BciVI GTATCC 2 cut(s) 1072, 1518
BcoDI GTCTC 4 cut(s) 200, 275, 303, 332
BfaI CTAG 8 cut(s) 63, 420, 428, 827, 1008, 1166, 1317, 1575
BfmI CTRYAG 4 cut(s) 228, 558, 645, 738
BfuI GTATCC 2 cut(s) 1072, 1518
BglII AGATCT 1 cut(s) 1415
Bme1390I CCNGG 5 cut(s) 212, 623, 709, 1206, 1322
Bme18I GGWCC 3 cut(s) 247, 554, 1067
BmeT110I CYCGRG 1 cut(s) 148
BmgT120I GGNCC 7 cut(s) 233, 247, 388, 468, 511, 554, 1067
BmiI GGNNCC 1 cut(s) 249
BmrFI CCNGG 5 cut(s) 212, 623, 709, 1206, 1322
BmrI ACTGGG 1 cut(s) 1530
BmsI GCATC 4 cut(s) 695, 893, 1347, 1732
BmtI GCTAGC 1 cut(s) 1320
BmuI ACTGGG 1 cut(s) 1530
BoxI GACNNNNGTC 1 cut(s) 1483
BpmI CTGGAG 4 cut(s) 327, 570, 1188, 1371
Bpu14I TTCGAA 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 987
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 210, 707
Bsc4I CCNNNNNNNGG 3 cut(s) 397, 563, 1050
Bse118I RCCGGY 1 cut(s) 1692
Bse1I ACTGG 6 cut(s) 310, 506, 920, 1080, 1148, 1525
Bse3DI GCAATG 3 cut(s) 657, 1599, 1653
BseBI CCWGG 5 cut(s) 212, 623, 709, 1206, 1322
BseDI CCNNGG 2 cut(s) 210, 707
BseGI GGATG 3 cut(s) 391, 1130, 1689
BseLI CCNNNNNNNGG 3 cut(s) 397, 563, 1050
BseMI GCAATG 3 cut(s) 657, 1599, 1653
BseMII CTCAG 2 cut(s) 50, 861
BseNI ACTGG 6 cut(s) 310, 506, 920, 1080, 1148, 1525
BseRI GAGGAG 1 cut(s) 374
BseYI CCCAGC 2 cut(s) 878, 1358
BsgI GTGCAG 1 cut(s) 815
BshFI GGCC 5 cut(s) 235, 389, 469, 512, 817
BsiHKAI GWGCWC 1 cut(s) 667
BsiHKCI CYCGRG 1 cut(s) 148
BsiSI CCGG 3 cut(s) 236, 386, 1693
BslFI GGGAC 4 cut(s) 233, 676, 690, 1567
BslI CCNNNNNNNGG 3 cut(s) 397, 563, 1050
BsmAI GTCTC 4 cut(s) 200, 275, 303, 332
BsmFI GGGAC 4 cut(s) 233, 676, 690, 1567
BsmI GAATGC 1 cut(s) 897
BsnI GGCC 5 cut(s) 235, 389, 469, 512, 817
Bso31I GGTCTC 1 cut(s) 200
BsoBI CYCGRG 1 cut(s) 148
Bsp119I TTCGAA 1 cut(s) 104
Bsp1286I GDGCHC 1 cut(s) 667
Bsp1407I TGTACA 1 cut(s) 175
Bsp143I GATC 5 cut(s) 577, 859, 916, 1415, 1458
BspACI CCGC 6 cut(s) 776, 974, 1024, 1263, 1330, 1529
BspANI GGCC 5 cut(s) 235, 389, 469, 512, 817
BspCNI CTCAG 2 cut(s) 49, 862
BspLI GGNNCC 1 cut(s) 249
BspMAI CTGCAG 1 cut(s) 649
BspOI GCTAGC 1 cut(s) 1320
BspPI GGATC 2 cut(s) 585, 911
BspT104I TTCGAA 1 cut(s) 104
BspTNI GGTCTC 1 cut(s) 200
BsrDI GCAATG 3 cut(s) 657, 1599, 1653
BsrFI RCCGGY 1 cut(s) 1692
BsrGI TGTACA 1 cut(s) 175
BsrI ACTGG 6 cut(s) 310, 506, 920, 1080, 1148, 1525
BssAI RCCGGY 1 cut(s) 1692
BssECI CCNNGG 2 cut(s) 210, 707
BssMI GATC 5 cut(s) 577, 859, 916, 1415, 1458
Bst2UI CCWGG 5 cut(s) 212, 623, 709, 1206, 1322
Bst4CI ACNGT 3 cut(s) 326, 608, 1390
BstAPI GCANNNNNTGC 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 175
BstBAI YACGTR 1 cut(s) 987
BstBI TTCGAA 1 cut(s) 104
BstC8I GCNNGC 5 cut(s) 537, 597, 1162, 1318, 1747
BstDEI CTNAG 4 cut(s) 36, 848, 870, 1029
BstENI CCTNNNNNAGG 1 cut(s) 1048
BstF5I GGATG 3 cut(s) 391, 1130, 1689
BstHHI GCGC 1 cut(s) 634
BstKTI GATC 5 cut(s) 580, 862, 919, 1418, 1461
BstMAI GTCTC 4 cut(s) 200, 275, 303, 332
BstMBI GATC 5 cut(s) 577, 859, 916, 1415, 1458
BstMWI GCNNNNNNNGC 8 cut(s) 386, 416, 545, 1166, 1355, 1580, 1589, 1613
BstNI CCWGG 5 cut(s) 212, 623, 709, 1206, 1322
BstNSI RCATGY 3 cut(s) 930, 948, 1486
BstPAI GACNNNNGTC 1 cut(s) 1483
BstSCI CCNGG 5 cut(s) 210, 621, 707, 1204, 1320
BstSFI CTRYAG 4 cut(s) 228, 558, 645, 738
BstX2I RGATCY 1 cut(s) 1415
BstYI RGATCY 1 cut(s) 1415
BsuI GTATCC 2 cut(s) 1072, 1518
BsuRI GGCC 5 cut(s) 235, 389, 469, 512, 817
BtgZI GCGATG 1 cut(s) 59
BtsCI GGATG 3 cut(s) 391, 1130, 1689
BtsI GCAGTG 2 cut(s) 338, 1655
BtsIMutI CAGTG 5 cut(s) 168, 338, 513, 1276, 1655
Cac8I GCNNGC 5 cut(s) 537, 597, 1162, 1318, 1747
CfoI GCGC 1 cut(s) 634
Cfr10I RCCGGY 1 cut(s) 1692
Cfr13I GGNCC 7 cut(s) 233, 247, 388, 468, 511, 554, 1067
Csp6I GTAC 4 cut(s) 176, 567, 719, 1196
CviAII CATG 7 cut(s) 110, 188, 517, 927, 945, 1483, 1680
CviQI GTAC 4 cut(s) 176, 567, 719, 1196
DdeI CTNAG 4 cut(s) 36, 848, 870, 1029
DpnI GATC 5 cut(s) 579, 861, 918, 1417, 1460
DpnII GATC 5 cut(s) 577, 859, 916, 1415, 1458
DraIII CACNNNGTG 1 cut(s) 1238
Eco147I AGGCCT 1 cut(s) 817
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 3 cut(s) 247, 554, 1067
Eco57I CTGAAG 1 cut(s) 1083
Eco72I CACGTG 1 cut(s) 987
Eco88I CYCGRG 1 cut(s) 148
EcoNI CCTNNNNNAGG 1 cut(s) 1048
EcoO109I RGGNCCY 2 cut(s) 554, 1067
EcoRI GAATTC 1 cut(s) 100
EcoRII CCWGG 5 cut(s) 210, 621, 707, 1204, 1320
FaeI CATG 7 cut(s) 113, 191, 520, 930, 948, 1486, 1683
FalI AAGNNNNNCTT 2 cut(s) 1121, 1153
FaqI GGGAC 4 cut(s) 233, 676, 690, 1567
FatI CATG 7 cut(s) 109, 187, 516, 926, 944, 1482, 1679
FokI GGATG 3 cut(s) 378, 1137, 1696
FspBI CTAG 8 cut(s) 63, 420, 428, 827, 1008, 1166, 1317, 1575
FspI TGCGCA 1 cut(s) 633
GlaI GCGC 1 cut(s) 633
GsaI CCCAGC 2 cut(s) 882, 1362
GsuI CTGGAG 4 cut(s) 327, 570, 1188, 1371
HaeIII GGCC 5 cut(s) 235, 389, 469, 512, 817
HapII CCGG 3 cut(s) 236, 386, 1693
HhaI GCGC 1 cut(s) 634
Hin1II CATG 7 cut(s) 113, 191, 520, 930, 948, 1486, 1683
Hin6I GCGC 1 cut(s) 632
HinP1I GCGC 1 cut(s) 632
HindIII AAGCTT 2 cut(s) 533, 1001
HinfI GANTC 5 cut(s) 218, 287, 1510, 1586, 1705
HpaII CCGG 3 cut(s) 236, 386, 1693
HphI GGTGA 1 cut(s) 1378
Hpy166II GTNNAC 6 cut(s) 178, 299, 322, 811, 1037, 1274
Hpy188I TCNGA 2 cut(s) 871, 1637
Hpy188III TCNNGA 4 cut(s) 63, 331, 907, 1019
Hpy8I GTNNAC 6 cut(s) 178, 299, 322, 811, 1037, 1274
HpyAV CCTTC 4 cut(s) 690, 1058, 1123, 1448
HpyCH4III ACNGT 3 cut(s) 326, 608, 1390
HpyCH4IV ACGT 1 cut(s) 986
HpyF10VI GCNNNNNNNGC 8 cut(s) 386, 416, 545, 1166, 1355, 1580, 1589, 1613
HpyF3I CTNAG 4 cut(s) 36, 848, 870, 1029
HpySE526I ACGT 1 cut(s) 986
Hsp92II CATG 7 cut(s) 113, 191, 520, 930, 948, 1486, 1683
HspAI GCGC 1 cut(s) 632
Kzo9I GATC 5 cut(s) 577, 859, 916, 1415, 1458
LmnI GCTCC 4 cut(s) 361, 734, 778, 1352
LweI GCATC 4 cut(s) 695, 893, 1347, 1732
MaeI CTAG 8 cut(s) 63, 420, 428, 827, 1008, 1166, 1317, 1575
MaeII ACGT 1 cut(s) 986
MaeIII GTNAC 3 cut(s) 25, 922, 1653
MalI GATC 5 cut(s) 579, 861, 918, 1417, 1460
MboI GATC 5 cut(s) 577, 859, 916, 1415, 1458
MboII GAAGA 3 cut(s) 1145, 1438, 1505
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 1415
MhlI GDGCHC 1 cut(s) 667
MlyI GAGTC 1 cut(s) 1595
MmeI TCCRAC 1 cut(s) 1733
MseI TTAA 9 cut(s) 144, 612, 728, 950, 992, 1116, 1188, 1343, 1753
MslI CAYNNNNRTG 1 cut(s) 317
MspA1I CMGCKG 4 cut(s) 227, 629, 776, 1358
MspI CCGG 3 cut(s) 236, 386, 1693
MspR9I CCNGG 5 cut(s) 212, 623, 709, 1206, 1322
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 897
MvaI CCWGG 5 cut(s) 212, 623, 709, 1206, 1322
MwoI GCNNNNNNNGC 8 cut(s) 386, 416, 545, 1166, 1355, 1580, 1589, 1613
NdeII GATC 5 cut(s) 577, 859, 916, 1415, 1458
NheI GCTAGC 1 cut(s) 1316
NlaIII CATG 7 cut(s) 113, 191, 520, 930, 948, 1486, 1683
NlaIV GGNNCC 1 cut(s) 249
NmuCI GTSAC 2 cut(s) 25, 1653
NsbI TGCGCA 1 cut(s) 633
NspI RCATGY 3 cut(s) 930, 948, 1486
NspV TTCGAA 1 cut(s) 104
OliI CACNNNNGTG 1 cut(s) 317
PaeR7I CTCGAG 1 cut(s) 148
PceI AGGCCT 1 cut(s) 817
PciI ACATGT 2 cut(s) 944, 1482
PctI GAATGC 1 cut(s) 897
PfeI GAWTC 4 cut(s) 218, 287, 1510, 1705
PflMI CCANNNNNTGG 1 cut(s) 397
PleI GAGTC 1 cut(s) 1594
PmaCI CACGTG 1 cut(s) 987
PmlI CACGTG 1 cut(s) 987
PpsI GAGTC 1 cut(s) 1594
Ppu21I YACGTR 1 cut(s) 987
PpuMI RGGWCCY 2 cut(s) 554, 1067
PscI ACATGT 2 cut(s) 944, 1482
PshAI GACNNNNGTC 1 cut(s) 1483
Psp5II RGGWCCY 2 cut(s) 554, 1067
Psp6I CCWGG 5 cut(s) 210, 621, 707, 1204, 1320
PspCI CACGTG 1 cut(s) 987
PspFI CCCAGC 2 cut(s) 878, 1358
PspGI CCWGG 5 cut(s) 210, 621, 707, 1204, 1320
PspN4I GGNNCC 1 cut(s) 249
PspPI GGNCC 7 cut(s) 233, 247, 388, 468, 511, 554, 1067
PspPPI RGGWCCY 2 cut(s) 554, 1067
PspXI VCTCGAGB 1 cut(s) 148
PstI CTGCAG 1 cut(s) 649
PsuI RGATCY 1 cut(s) 1415
PvuII CAGCTG 3 cut(s) 227, 629, 1358
RsaI GTAC 4 cut(s) 177, 568, 720, 1197
RsaNI GTAC 4 cut(s) 176, 567, 719, 1196
RseI CAYNNNNRTG 1 cut(s) 317
SaqAI TTAA 9 cut(s) 144, 612, 728, 950, 992, 1116, 1188, 1343, 1753
Sau3AI GATC 5 cut(s) 577, 859, 916, 1415, 1458
Sau96I GGNCC 7 cut(s) 233, 247, 388, 468, 511, 554, 1067
SchI GAGTC 1 cut(s) 1595
ScrFI CCNGG 5 cut(s) 212, 623, 709, 1206, 1322
SduI GDGCHC 1 cut(s) 667
SfaNI GCATC 4 cut(s) 695, 893, 1347, 1732
SfcI CTRYAG 4 cut(s) 228, 558, 645, 738
Sfr274I CTCGAG 1 cut(s) 148
SfuI TTCGAA 1 cut(s) 104
SinI GGWCC 3 cut(s) 247, 554, 1067
SlaI CTCGAG 1 cut(s) 148
SmiMI CAYNNNNRTG 1 cut(s) 317
SmlI CTYRAG 1 cut(s) 148
SmoI CTYRAG 1 cut(s) 148
SseBI AGGCCT 1 cut(s) 817
SsiI CCGC 6 cut(s) 776, 974, 1024, 1263, 1330, 1529
SspI AATATT 1 cut(s) 616
SspMI CTAG 8 cut(s) 63, 420, 428, 827, 1008, 1166, 1317, 1575
StuI AGGCCT 1 cut(s) 817
StyD4I CCNGG 5 cut(s) 210, 621, 707, 1204, 1320
TaaI ACNGT 3 cut(s) 326, 608, 1390
TaiI ACGT 1 cut(s) 989
TaqI TCGA 5 cut(s) 104, 149, 353, 853, 908
TaqII GACCGA 1 cut(s) 235
TatI WGTACW 3 cut(s) 175, 718, 1195
TauI GCSGC 1 cut(s) 1333
TfiI GAWTC 4 cut(s) 218, 287, 1510, 1705
Tru1I TTAA 9 cut(s) 144, 612, 728, 950, 992, 1116, 1188, 1343, 1753
Tru9I TTAA 9 cut(s) 144, 612, 728, 950, 992, 1116, 1188, 1343, 1753
TscAI CASTG 5 cut(s) 175, 345, 513, 1276, 1662
TseFI GTSAC 2 cut(s) 25, 1653
Tsp45I GTSAC 2 cut(s) 25, 1653
TspDTI ATGAA 4 cut(s) 9, 248, 703, 1731
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 5 cut(s) 175, 345, 513, 1276, 1662
Van91I CCANNNNNTGG 1 cut(s) 397
VpaK11BI GGWCC 3 cut(s) 247, 554, 1067
XagI CCTNNNNNAGG 1 cut(s) 1048
XapI RAATTY 3 cut(s) 100, 436, 457
XbaI TCTAGA 1 cut(s) 62
XceI RCATGY 3 cut(s) 930, 948, 1486
XcmI CCANNNNNNNNNTGG 2 cut(s) 116, 1090
XhoI CTCGAG 1 cut(s) 148
XspI CTAG 8 cut(s) 63, 420, 428, 827, 1008, 1166, 1317, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.