Rw3G006830

Solute carrier family 40 member 3

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
6383880 .. 6388076
4197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G006830.1

Sequence Viewer

Length: 1749 bp
ATGGCTTTGGCTTTTGGTTCAACGGTTACTCTCTCTCAGTATTCTCTCAATTTCAATTCCTCTAGATTTCGCCATCGGATTGCTTCTCGCCAGTGGTTGAATTTGAACCATGTTTCTGTTGGTTCTCATAGATTTATTAATGCAAGGTGTTCAATGACCAACACCGATGTACACTTCAACCATGTGGCTACTGAAAATGAGACGCAAGATGAATCATCAGACATAGGGATTGAGTGTTCGGTCCCAGTTGTTCATCTCACACCTGATATCCTTGAGACTGAATCTTTGAGTTTATTAACTGAAGACACTTATGTGGATAGTCTATTGATAACACTGCCTGTTTTGTCAAAAGAGGAGCAGCACACCCTTGCAGCTACTCCGGCCCATCCAATGGGATTATATGCTTTATATGCTAGTTGTCTAGCTGGAAATGTGGTGGAACAATTTTGGAATTTCGCTTGGCCCTCTGCTATTGCATTAATATATCCAAGCCTTTTGCCAGTGGCCCTCATGGGTTTTGTTAGTAAGCTTGCAATAATTGCTGGAGGTCCTATAGTGGGTACACTTATGGATCATTTCCCCAGAGTGCCTGCGTATAACTGTCTGAATATTATCCAGGCAGCTGCTCAGTTATTATCTGCAACAATGATAATTTGTGCTCATTCAGTTCCCCCTTCTGCATCGTCCCTCCTTCTCCGTCCCTGGTTCATTGTACTTGTATTGAGTGGAGCTGTAGAGAGGCTATCTGGTGTAGCAGTAGGAGTTGCTGCAGAGCGTGATTGGGTGGTGCAGTTGGCAGGAGTGAACAGGCCTATTGCACTTGCAGAAGCAAATGCCATTCTTAGTCGAATTGACCTACTCTGTGAGATAGCTGGGGCATCACTATTTGGCATTCTTATCTCGAAGTATGACCCAGTAACATGCTTGAAGTTTGCCACAGGTTTAATGGTGTGGTCGTTGCCTTTTGCAATTGTTCTCGCATGTTTAACCAACAAGCTTTCTAGCGGGGTTCTTGACCGCCCTAAATGTTCACAAACCTGTTGTAGGACATTTACTGAAGGACCTCTTCTTGATACCAACAATATAGTGGGTAAAGGTTTCGAAGCTATTAAACTTGGATGGAAGGAATACTTACAGCAGCCAGTTCTTCCTGCAAGCCTAGCCTATGTCCTGCTTTATTTTAATGTTGTACTAACTCCAGGCAGTTTGATGACAGCCTATCTAACACAGAGTGGTCTAAATCCATCTATCATTGGCGGTTTCAGTGGACTATGTGCCTTTATGGGTGTCGCAGCAACATTTGTCTCGGCTAGCCTGGTCAGGCGACTTGGCATCTTAAAGGCTGGAGCAGCTGGGTTGATAATTCAGGCTTCACTTCTCACCGTAGCTGTTGCTGTTTATTGTAGTAGATCTCCTTCCCAGCAAAGCCCCCTTCTTTTCTTCTTGTGCTTGATTGTATTATCAAGGTTAGGACACATGTCATACGATGTTGTGGCAGCCCAGATTCTTCAAACTGGGATACCGCCATCCAAAGTAAATATCATCGGGACTACAGAAGTAGCTGTTGCTAGTCTGGCAGAGTCTGCAATGTTGGGAGTTGCGATTATTGCCAACGATGTTTCACATTTTGGATTTCTATCGATTTTGTCACTCCTATCAGTAGTTGCGGCAGCATGGATGTTCTGCCGGTGGTTGTTGAATCCAACAGATGAACAAAGAAGTCTTTTCTCATTTGATGCCCGCTGTTAA

Protein Analysis

582

Amino Acids

62.44

Weight (kDa)

6.31

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 133 - 554 3.4e-122 Ferroportin1 (FPN1)
MFS_1 PF07690 164 - 512 1.3e-08 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011217)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 391
AciI CCGC 6 cut(s) 1005, 1018, 1257, 1523, 1667, 1741
AclWI GGATC 1 cut(s) 579
AcsI RAATTY 2 cut(s) 100, 451
AcuI CTGAAG 2 cut(s) 321, 1077
AdeI CACNNNGTG 1 cut(s) 1232
AfaI GTAC 4 cut(s) 171, 562, 714, 1191
AfiI CCNNNNNNNGG 3 cut(s) 391, 557, 1044
AflIII ACRYGT 1 cut(s) 1476
AgsI TTSAA 9 cut(s) 21, 55, 100, 106, 153, 178, 928, 1511, 1699
AjnI CCWGG 4 cut(s) 615, 701, 1198, 1314
AleI CACNNNNGTG 1 cut(s) 311
AloI GAACNNNNNNTCC 2 cut(s) 220, 252
Alw21I GWGCWC 1 cut(s) 661
Alw26I GTCTC 3 cut(s) 194, 269, 1309
AlwI GGATC 1 cut(s) 579
AlwNI CAGNNNCTG 1 cut(s) 1583
AoxI GGCC 4 cut(s) 381, 461, 504, 809
ApoI RAATTY 2 cut(s) 100, 451
ArsI GACNNNNNNTTYG 2 cut(s) 268, 300
AseI ATTAAT 2 cut(s) 138, 479
AspS9I GGNCC 6 cut(s) 241, 382, 462, 505, 548, 1061
AsuHPI GGTGA 1 cut(s) 1372
AsuII TTCGAA 1 cut(s) 1101
AsuNHI GCTAGC 1 cut(s) 1310
AvaII GGWCC 3 cut(s) 241, 548, 1061
BarI GAAGNNNNNNTAC 2 cut(s) 1399, 1431
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 661
BccI CCATC 5 cut(s) 81, 393, 1113, 1252, 1534
BciT130I CCWGG 4 cut(s) 617, 703, 1200, 1316
BciVI GTATCC 1 cut(s) 1512
BcoDI GTCTC 3 cut(s) 194, 269, 1309
BfaI CTAG 7 cut(s) 63, 414, 422, 1002, 1160, 1311, 1569
BfmI CTRYAG 4 cut(s) 552, 732, 768, 1551
BfuI GTATCC 1 cut(s) 1512
BglII AGATCT 1 cut(s) 1409
Bme1390I CCNGG 4 cut(s) 617, 703, 1200, 1316
Bme18I GGWCC 3 cut(s) 241, 548, 1061
BmgT120I GGNCC 6 cut(s) 241, 382, 462, 505, 548, 1061
BmiI GGNNCC 1 cut(s) 243
BmrFI CCNGG 4 cut(s) 617, 703, 1200, 1316
BmrI ACTGGG 3 cut(s) 239, 908, 1524
BmsI GCATC 4 cut(s) 689, 887, 1341, 1726
BmtI GCTAGC 1 cut(s) 1314
BmuI ACTGGG 3 cut(s) 239, 908, 1524
BoxI GACNNNNGTC 1 cut(s) 1477
BpiI GAAGAC 1 cut(s) 309
BpmI CTGGAG 3 cut(s) 564, 1182, 1365
Bpu14I TTCGAA 1 cut(s) 1101
BpuEI CTTGAG 1 cut(s) 293
Bsa29I ATCGAT 1 cut(s) 1640
BsaBI GATNNNNATC 1 cut(s) 1636
BsaJI CCNNGG 1 cut(s) 701
Bsc4I CCNNNNNNNGG 3 cut(s) 391, 557, 1044
Bse118I RCCGGY 1 cut(s) 1686
Bse1I ACTGG 6 cut(s) 91, 245, 500, 914, 1142, 1519
Bse3DI GCAATG 1 cut(s) 1593
Bse8I GATNNNNATC 1 cut(s) 1636
BseBI CCWGG 4 cut(s) 617, 703, 1200, 1316
BseCI ATCGAT 1 cut(s) 1640
BseDI CCNNGG 1 cut(s) 701
BseGI GGATG 4 cut(s) 385, 1124, 1526, 1683
BseJI GATNNNNATC 1 cut(s) 1636
BseLI CCNNNNNNNGG 3 cut(s) 391, 557, 1044
BseMI GCAATG 1 cut(s) 1593
BseMII CTCAG 2 cut(s) 50, 641
BseNI ACTGG 6 cut(s) 91, 245, 500, 914, 1142, 1519
BseRI GAGGAG 1 cut(s) 368
BseYI CCCAGC 3 cut(s) 872, 1352, 1419
BsgI GTGCAG 1 cut(s) 809
BshFI GGCC 4 cut(s) 383, 463, 506, 811
BshVI ATCGAT 1 cut(s) 1640
BsiHKAI GWGCWC 1 cut(s) 661
BsiSI CCGG 2 cut(s) 380, 1687
BslFI GGGAC 4 cut(s) 227, 670, 684, 1561
BslI CCNNNNNNNGG 3 cut(s) 391, 557, 1044
BsmAI GTCTC 3 cut(s) 194, 269, 1309
BsmBI CGTCTC 1 cut(s) 194
BsmFI GGGAC 4 cut(s) 227, 670, 684, 1561
BsmI GAATGC 1 cut(s) 891
BsnI GGCC 4 cut(s) 383, 463, 506, 811
Bsp119I TTCGAA 1 cut(s) 1101
Bsp1286I GDGCHC 1 cut(s) 661
Bsp1407I TGTACA 1 cut(s) 169
Bsp143I GATC 2 cut(s) 571, 1409
BspACI CCGC 6 cut(s) 1005, 1018, 1257, 1523, 1667, 1741
BspANI GGCC 4 cut(s) 383, 463, 506, 811
BspCNI CTCAG 2 cut(s) 49, 640
BspDI ATCGAT 1 cut(s) 1640
BspLI GGNNCC 1 cut(s) 243
BspMAI CTGCAG 1 cut(s) 772
BspOI GCTAGC 1 cut(s) 1314
BspPI GGATC 1 cut(s) 579
BspT104I TTCGAA 1 cut(s) 1101
BsrDI GCAATG 1 cut(s) 1593
BsrFI RCCGGY 1 cut(s) 1686
BsrGI TGTACA 1 cut(s) 169
BsrI ACTGG 6 cut(s) 91, 245, 500, 914, 1142, 1519
BssAI RCCGGY 1 cut(s) 1686
BssECI CCNNGG 1 cut(s) 701
BssMI GATC 2 cut(s) 571, 1409
Bst2UI CCWGG 4 cut(s) 617, 703, 1200, 1316
Bst4CI ACNGT 3 cut(s) 25, 602, 1384
Bst6I CTCTTC 1 cut(s) 1071
BstAPI GCANNNNNTGC 2 cut(s) 539, 1583
BstAUI TGTACA 1 cut(s) 169
BstBI TTCGAA 1 cut(s) 1101
BstC8I GCNNGC 5 cut(s) 531, 591, 1156, 1312, 1741
BstDEI CTNAG 3 cut(s) 36, 627, 842
BstENI CCTNNNNNAGG 1 cut(s) 1042
BstF5I GGATG 4 cut(s) 385, 1124, 1526, 1683
BstKTI GATC 2 cut(s) 574, 1412
BstMAI GTCTC 3 cut(s) 194, 269, 1309
BstMBI GATC 2 cut(s) 571, 1409
BstMWI GCNNNNNNNGC 8 cut(s) 380, 410, 539, 1160, 1349, 1574, 1583, 1607
BstNI CCWGG 4 cut(s) 617, 703, 1200, 1316
BstNSI RCATGY 3 cut(s) 924, 984, 1480
BstPAI GACNNNNGTC 1 cut(s) 1477
BstSCI CCNGG 4 cut(s) 615, 701, 1198, 1314
BstSFI CTRYAG 4 cut(s) 552, 732, 768, 1551
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 1409
BstYI RGATCY 1 cut(s) 1409
Bsu15I ATCGAT 1 cut(s) 1640
BsuI GTATCC 1 cut(s) 1512
BsuRI GGCC 4 cut(s) 383, 463, 506, 811
BsuTUI ATCGAT 1 cut(s) 1640
BtsCI GGATG 4 cut(s) 385, 1124, 1526, 1683
BtsI GCAGTG 1 cut(s) 332
BtsIMutI CAGTG 4 cut(s) 98, 332, 507, 1270
Cac8I GCNNGC 5 cut(s) 531, 591, 1156, 1312, 1741
CaiI CAGNNNCTG 1 cut(s) 1583
Cfr10I RCCGGY 1 cut(s) 1686
Cfr13I GGNCC 6 cut(s) 241, 382, 462, 505, 548, 1061
ClaI ATCGAT 1 cut(s) 1640
CseI GACGC 1 cut(s) 211
Csp6I GTAC 4 cut(s) 170, 561, 713, 1190
CviAII CATG 7 cut(s) 110, 182, 511, 921, 981, 1477, 1674
CviQI GTAC 4 cut(s) 170, 561, 713, 1190
DdeI CTNAG 3 cut(s) 36, 627, 842
DpnI GATC 2 cut(s) 573, 1411
DpnII GATC 2 cut(s) 571, 1409
DraIII CACNNNGTG 1 cut(s) 1232
Eam1104I CTCTTC 1 cut(s) 1071
EarI CTCTTC 1 cut(s) 1071
Eco147I AGGCCT 1 cut(s) 811
Eco32I GATATC 1 cut(s) 268
Eco47I GGWCC 3 cut(s) 241, 548, 1061
Eco57I CTGAAG 2 cut(s) 321, 1077
EcoNI CCTNNNNNAGG 1 cut(s) 1042
EcoO109I RGGNCCY 2 cut(s) 548, 1061
EcoRII CCWGG 4 cut(s) 615, 701, 1198, 1314
EcoRV GATATC 1 cut(s) 268
Esp3I CGTCTC 1 cut(s) 194
FaeI CATG 7 cut(s) 113, 185, 514, 924, 984, 1480, 1677
FalI AAGNNNNNCTT 4 cut(s) 1050, 1082, 1115, 1147
FaqI GGGAC 4 cut(s) 227, 670, 684, 1561
FatI CATG 7 cut(s) 109, 181, 510, 920, 980, 1476, 1673
FauI CCCGC 1 cut(s) 998
FokI GGATG 4 cut(s) 372, 1131, 1513, 1690
FspBI CTAG 7 cut(s) 63, 414, 422, 1002, 1160, 1311, 1569
GsaI CCCAGC 3 cut(s) 876, 1356, 1423
GsuI CTGGAG 3 cut(s) 564, 1182, 1365
HaeIII GGCC 4 cut(s) 383, 463, 506, 811
HapII CCGG 2 cut(s) 380, 1687
HgaI GACGC 1 cut(s) 211
Hin1II CATG 7 cut(s) 113, 185, 514, 924, 984, 1480, 1677
HindIII AAGCTT 2 cut(s) 527, 995
HinfI GANTC 5 cut(s) 212, 281, 1504, 1580, 1699
HpaII CCGG 2 cut(s) 380, 1687
HphI GGTGA 1 cut(s) 1372
Hpy166II GTNNAC 5 cut(s) 172, 563, 805, 1031, 1268
Hpy188I TCNGA 3 cut(s) 78, 220, 606
Hpy188III TCNNGA 5 cut(s) 63, 901, 1013, 1070, 1546
Hpy8I GTNNAC 5 cut(s) 172, 563, 805, 1031, 1268
HpyAV CCTTC 6 cut(s) 684, 701, 1052, 1117, 1425, 1442
HpyCH4III ACNGT 3 cut(s) 25, 602, 1384
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 410, 539, 1160, 1349, 1574, 1583, 1607
HpyF3I CTNAG 3 cut(s) 36, 627, 842
Hsp92II CATG 7 cut(s) 113, 185, 514, 924, 984, 1480, 1677
Kzo9I GATC 2 cut(s) 571, 1409
LmnI GCTCC 3 cut(s) 355, 728, 1346
LweI GCATC 4 cut(s) 689, 887, 1341, 1726
MaeI CTAG 7 cut(s) 63, 414, 422, 1002, 1160, 1311, 1569
MaeIII GTNAC 3 cut(s) 25, 916, 1647
MalI GATC 2 cut(s) 573, 1411
MboI GATC 2 cut(s) 571, 1409
MboII GAAGA 5 cut(s) 314, 1058, 1139, 1432, 1499
MfeI CAATTG 1 cut(s) 969
MflI RGATCY 1 cut(s) 1409
MhlI GDGCHC 1 cut(s) 661
MlyI GAGTC 1 cut(s) 1589
MmeI TCCRAC 1 cut(s) 1727
MnlI CCTC 8 cut(s) 70, 346, 475, 518, 539, 698, 732, 1074
MseI TTAA 9 cut(s) 138, 296, 479, 944, 986, 1110, 1182, 1337, 1747
MslI CAYNNNNRTG 1 cut(s) 311
MspA1I CMGCKG 3 cut(s) 623, 1352, 1743
MspI CCGG 2 cut(s) 380, 1687
MspR9I CCNGG 4 cut(s) 617, 703, 1200, 1316
MunI CAATTG 1 cut(s) 969
Mva1269I GAATGC 1 cut(s) 891
MvaI CCWGG 4 cut(s) 617, 703, 1200, 1316
MwoI GCNNNNNNNGC 8 cut(s) 380, 410, 539, 1160, 1349, 1574, 1583, 1607
NdeII GATC 2 cut(s) 571, 1409
NheI GCTAGC 1 cut(s) 1310
NlaIII CATG 7 cut(s) 113, 185, 514, 924, 984, 1480, 1677
NlaIV GGNNCC 1 cut(s) 243
NmeAIII GCCGAG 1 cut(s) 1286
NmuCI GTSAC 1 cut(s) 1647
NspI RCATGY 3 cut(s) 924, 984, 1480
NspV TTCGAA 1 cut(s) 1101
OliI CACNNNNGTG 1 cut(s) 311
PceI AGGCCT 1 cut(s) 811
PciI ACATGT 1 cut(s) 1476
PctI GAATGC 1 cut(s) 891
PfeI GAWTC 4 cut(s) 212, 281, 1504, 1699
PflMI CCANNNNNTGG 1 cut(s) 391
PleI GAGTC 1 cut(s) 1588
PpsI GAGTC 1 cut(s) 1588
PpuMI RGGWCCY 2 cut(s) 548, 1061
PscI ACATGT 1 cut(s) 1476
PshAI GACNNNNGTC 1 cut(s) 1477
PshBI ATTAAT 2 cut(s) 138, 479
Psp5II RGGWCCY 2 cut(s) 548, 1061
Psp6I CCWGG 4 cut(s) 615, 701, 1198, 1314
PspFI CCCAGC 3 cut(s) 872, 1352, 1419
PspGI CCWGG 4 cut(s) 615, 701, 1198, 1314
PspN4I GGNNCC 1 cut(s) 243
PspPI GGNCC 6 cut(s) 241, 382, 462, 505, 548, 1061
PspPPI RGGWCCY 2 cut(s) 548, 1061
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 1 cut(s) 1583
PsuI RGATCY 1 cut(s) 1409
PvuII CAGCTG 2 cut(s) 623, 1352
RsaI GTAC 4 cut(s) 171, 562, 714, 1191
RsaNI GTAC 4 cut(s) 170, 561, 713, 1190
RseI CAYNNNNRTG 1 cut(s) 311
SaqAI TTAA 9 cut(s) 138, 296, 479, 944, 986, 1110, 1182, 1337, 1747
Sau3AI GATC 2 cut(s) 571, 1409
Sau96I GGNCC 6 cut(s) 241, 382, 462, 505, 548, 1061
SchI GAGTC 1 cut(s) 1589
ScrFI CCNGG 4 cut(s) 617, 703, 1200, 1316
SduI GDGCHC 1 cut(s) 661
SfaNI GCATC 4 cut(s) 689, 887, 1341, 1726
SfcI CTRYAG 4 cut(s) 552, 732, 768, 1551
SfuI TTCGAA 1 cut(s) 1101
SinI GGWCC 3 cut(s) 241, 548, 1061
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
SseBI AGGCCT 1 cut(s) 811
SsiI CCGC 6 cut(s) 1005, 1018, 1257, 1523, 1667, 1741
SspI AATATT 1 cut(s) 610
SspMI CTAG 7 cut(s) 63, 414, 422, 1002, 1160, 1311, 1569
StuI AGGCCT 1 cut(s) 811
StyD4I CCNGG 4 cut(s) 615, 701, 1198, 1314
TaaI ACNGT 3 cut(s) 25, 602, 1384
TaqI TCGA 4 cut(s) 847, 902, 1101, 1640
TaqII GACCGA 1 cut(s) 229
TatI WGTACW 3 cut(s) 169, 712, 1189
TauI GCSGC 1 cut(s) 1670
TfiI GAWTC 4 cut(s) 212, 281, 1504, 1699
Tru1I TTAA 9 cut(s) 138, 296, 479, 944, 986, 1110, 1182, 1337, 1747
Tru9I TTAA 9 cut(s) 138, 296, 479, 944, 986, 1110, 1182, 1337, 1747
TscAI CASTG 4 cut(s) 98, 339, 507, 1270
TseFI GTSAC 1 cut(s) 1647
Tsp45I GTSAC 1 cut(s) 1647
TspDTI ATGAA 4 cut(s) 225, 242, 697, 1725
TspGWI ACGGA 1 cut(s) 686
TspRI CASTG 4 cut(s) 98, 339, 507, 1270
Van91I CCANNNNNTGG 1 cut(s) 391
VpaK11BI GGWCC 3 cut(s) 241, 548, 1061
VspI ATTAAT 2 cut(s) 138, 479
XagI CCTNNNNNAGG 1 cut(s) 1042
XapI RAATTY 2 cut(s) 100, 451
XbaI TCTAGA 1 cut(s) 62
XceI RCATGY 3 cut(s) 924, 984, 1480
XcmI CCANNNNNNNNNTGG 3 cut(s) 116, 943, 1084
XspI CTAG 7 cut(s) 63, 414, 422, 1002, 1160, 1311, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.