MD12G1205200.v1.1

Solute carrier family 40 member 3

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
28575724 .. 28581010
5287 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1205200.v1.1.491

Sequence Viewer

Length: 1902 bp
ATGGCTTTGGGTTGCGGTTGCGGGGTTACTCTCTCACAGTATTATCTCTCCAATTCATCTACTAGCTTATTTTCTGCTTGCCGTGCTTCTGTTTTATCGAGGCAACCAAGGCCTTCCTCTCGAATTCGCTATCGAATCGATTCTCGCAGGTGGTTGGGTTTGAGGCACCTATCTGTGGGCTCTCAGAGATTCGACAGTTTTAGTTCAAGGTGCTCAATAACCAACACCGATGCACACTTCAGCCACGTGGCTACTGACAATGAGGTCCAGGAGGAATCATCCATTGCAGAGCCTGGTTGCTCTAGTTGCTCGGTCCCAATTGTTGATATGCTGGACACTGAATCTTTGAGTTTACTAACTGAAGATACTTATGTAGATTGTCTTTTGACGACACTGCCAGTTTTATCAAAAGAGGAGCAACATACACTTGCAGCTACTCCAGCCCATCCAATGGGATTATATGCTTTTTATGCTAGTTGTCTAGCTGGAAATTTAGTGGAGCAATTTTGGAATTTCGCTTGGCCCTCTGCTATCGCATTGATATATCCAAGCCTTCTACCGGTGGCGTTCATAGGTTTCTTTAGTAAGCTTGCGATAATTGCTGGAGGCCCCTTAGTTGGCACACTTATGGATCATTTCCCCAGAGTACCTGCGTGTAACTGTCTTAATATTATCCAGGCAGCTGCTCAGTTGTTATCTGCAGCGATGATAATCCATGCGCATTGTGTTCCTCCTTCTGCGTCATCCCTTCTTCACCGCCCTTGGTTCATTGTACTTGTACTAGCTGGGGCTGTAGAGAGGCTATCTGGTGTCGCATTGGGGGTCGCTATGGAGCGTGATTGGGTGGTGCTGTTGGCAGGAGTGAACAGGCCTATTGCGCTTGCCCAAGCAAATGCTGTTCTTTATCGAATTGATCTTCTTTGTGAGATTGCTGGTGCATCCCTATTTGGCATTCTTCTATCAAAGTATGACCCAGTAACATGCTTGAAATTTTCGGGAGGTTTGATGGTGTGGTCGTTGCCTTTTGCCATTGTTCTCACATGTTTGACCAACAAGCTTTCTAGCGGGGTTCTTGACCGCCCAAAATGTTCGCAAACTTGTTGTAGAACATCCACTGAAGTATCTCTGTTTGATACCAACGACATAGTGGATAAAGGTGTGGCAGCTATTAAACTTGGATGGAAGGAGTACATGCAGCAACCAGTTCTTCCTGCTAGCCTAGCATATGTGCTGCTCTATTTTAATGTTGTACTCACTCCAGGCAGTTTGATGACAGCATTTTTAACGCAAAGTGGTCTAAATCCATCTATTATTGGGGGTTTTAGTGGACTATGTGCTTTTATGGGTGTTGCAGCGACATTTGTGTCTGCAAGCCTCGTCAGGCGACTTGGCATCTTAAAGGCAGGAGCAGCTGGATTAATATTTCAAGCTTCACTTCTCACCGTTGCTGTTGCTGTTTATTGTAGTGGATCTTCCTCCCAGCAGAGGCCCCTTCTATTCTTCTTGTGTTTGATTGTATTATCAAGGCTGGGGCACATGTCATACGATGTTGTGGCAGCACAGATTCTTCAAACTGGGATTCCATCGTCCAAAGCAAATATTATCGGCACAACAGAAGTTGCTGTTGCTAGTCTGGCAGAGTTTACAATGTTGGGAATTGCAATAATCGCCAATGACGTGTCACATTTTGGCTTTCTAGCAGTTCTATCACTCCTATCAGTGGTTGGGGCGGCGTGGATGTTCTGCCGATGGTTGTTGAATCCAACAGATGAGCAAAGAAGTCTTTTCTCTTTCGATGCTCGGTTTTTACTTTCTGTGGCCCTGGTGCAAAGGCTGTTCTACGTTATTCAGAATCAAGATATAGCACTACCTTTTACAATGCCCATGTTTTTCTATCAATAG

Protein Analysis

634

Amino Acids

68.3

Weight (kDa)

7.09

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FPN1 PF06963 153 - 574 1.9e-122 Ferroportin1 (FPN1)
MFS_1 PF07690 188 - 531 6.9e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011217)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 138
AasI GACNNNNNNGTC 2 cut(s) 263, 1363
Acc16I TGCGCA 1 cut(s) 720
Acc36I ACCTGC 2 cut(s) 138, 658
AccB1I GGYRCC 1 cut(s) 165
AccB7I CCANNNNNTGG 1 cut(s) 451
AciI CCGC 6 cut(s) 15, 21, 757, 1065, 1078, 1730
AclWI GGATC 2 cut(s) 639, 1477
AcsI RAATTY 4 cut(s) 123, 490, 511, 989
AcuI CTGAAG 3 cut(s) 223, 381, 1137
AcvI CACGTG 1 cut(s) 247
AfaI GTAC 5 cut(s) 648, 774, 780, 1190, 1251
AfiI CCNNNNNNNGG 6 cut(s) 175, 451, 559, 617, 1485, 1720
AflIII ACRYGT 3 cut(s) 1040, 1536, 1677
AgeI ACCGGT 1 cut(s) 559
AgsI TTSAA 5 cut(s) 207, 988, 1427, 1571, 1759
AjiI CACGTC 1 cut(s) 1678
AjnI CCWGG 5 cut(s) 267, 292, 675, 1258, 1821
Alw21I GWGCWC 1 cut(s) 215
AlwI GGATC 2 cut(s) 639, 1477
AlwNI CAGNNNCTG 1 cut(s) 293
AoxI GGCC 6 cut(s) 110, 521, 607, 869, 1487, 1818
ApoI RAATTY 4 cut(s) 123, 490, 511, 989
AseI ATTAAT 1 cut(s) 1418
AsiGI ACCGGT 1 cut(s) 559
Asp700I GAANNNNTTC 1 cut(s) 139
AspLEI GCGC 2 cut(s) 721, 880
AspS9I GGNCC 6 cut(s) 265, 313, 522, 608, 1488, 1819
AsuHPI GGTGA 2 cut(s) 746, 1432
AsuNHI GCTAGC 1 cut(s) 1214
AvaII GGWCC 2 cut(s) 265, 313
BaeGI GKGCMC 1 cut(s) 1536
BaeI ACNNNNGTAYC 4 cut(s) 357, 390, 1104, 1137
BanI GGYRCC 1 cut(s) 165
BanII GRGCYC 1 cut(s) 182
BarI GAAGNNNNNNTAC 2 cut(s) 1456, 1488
BbrPI CACGTG 1 cut(s) 247
Bbv12I GWGCWC 1 cut(s) 215
BccI CCATC 6 cut(s) 453, 1000, 1173, 1312, 1591, 1743
BceAI ACGGC 1 cut(s) 66
BciT130I CCWGG 5 cut(s) 269, 294, 677, 1260, 1823
BfmI CTRYAG 2 cut(s) 699, 792
BfuAI ACCTGC 2 cut(s) 138, 658
Bme1390I CCNGG 5 cut(s) 269, 294, 677, 1260, 1823
Bme18I GGWCC 2 cut(s) 265, 313
BmgBI CACGTC 1 cut(s) 1678
BmgT120I GGNCC 6 cut(s) 265, 313, 522, 608, 1488, 1819
BmiI GGNNCC 4 cut(s) 167, 315, 610, 1490
BmrFI CCNGG 5 cut(s) 269, 294, 677, 1260, 1823
BmrI ACTGGG 2 cut(s) 968, 1584
BmsI GCATC 4 cut(s) 220, 947, 1401, 1786
BmtI GCTAGC 1 cut(s) 1218
BmuI ACTGGG 2 cut(s) 968, 1584
BpmI CTGGAG 3 cut(s) 423, 624, 1242
Bsa29I ATCGAT 1 cut(s) 138
BsaAI YACGTR 1 cut(s) 247
BsaBI GATNNNNATC 1 cut(s) 710
BsaJI CCNNGG 3 cut(s) 107, 761, 1821
BsaWI WCCGGW 1 cut(s) 559
Bsc4I CCNNNNNNNGG 6 cut(s) 175, 451, 559, 617, 1485, 1720
Bse118I RCCGGY 1 cut(s) 559
Bse1I ACTGG 4 cut(s) 398, 974, 1202, 1579
Bse3DI GCAATG 1 cut(s) 282
Bse8I GATNNNNATC 1 cut(s) 710
BseBI CCWGG 5 cut(s) 269, 294, 677, 1260, 1823
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 3 cut(s) 107, 761, 1821
BseGI GGATG 7 cut(s) 278, 445, 743, 938, 1109, 1184, 1743
BseJI GATNNNNATC 1 cut(s) 710
BseLI CCNNNNNNNGG 6 cut(s) 175, 451, 559, 617, 1485, 1720
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 2 cut(s) 197, 701
BseNI ACTGG 4 cut(s) 398, 974, 1202, 1579
BseRI GAGGAG 1 cut(s) 428
BseSI GKGCMC 1 cut(s) 1536
BseYI CCCAGC 3 cut(s) 785, 1479, 1528
BshFI GGCC 6 cut(s) 112, 523, 609, 871, 1489, 1820
BshNI GGYRCC 1 cut(s) 165
BshTI ACCGGT 1 cut(s) 559
BshVI ATCGAT 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 215
BsiSI CCGG 1 cut(s) 560
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 6 cut(s) 175, 451, 559, 617, 1485, 1720
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 1 cut(s) 951
BsnI GGCC 6 cut(s) 112, 523, 609, 871, 1489, 1820
Bsp1286I GDGCHC 3 cut(s) 182, 215, 1536
Bsp143I GATC 3 cut(s) 631, 913, 1469
BspACI CCGC 6 cut(s) 15, 21, 757, 1065, 1078, 1730
BspANI GGCC 6 cut(s) 112, 523, 609, 871, 1489, 1820
BspCNI CTCAG 2 cut(s) 196, 700
BspDI ATCGAT 1 cut(s) 138
BspLI GGNNCC 4 cut(s) 167, 315, 610, 1490
BspMAI CTGCAG 1 cut(s) 703
BspMI ACCTGC 2 cut(s) 138, 658
BspOI GCTAGC 1 cut(s) 1218
BspPI GGATC 2 cut(s) 639, 1477
BspT107I GGYRCC 1 cut(s) 165
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 1 cut(s) 559
BsrI ACTGG 4 cut(s) 398, 974, 1202, 1579
BssAI RCCGGY 1 cut(s) 559
BssECI CCNNGG 3 cut(s) 107, 761, 1821
BssMI GATC 3 cut(s) 631, 913, 1469
BssT1I CCWWGG 2 cut(s) 107, 761
Bst2UI CCWGG 5 cut(s) 269, 294, 677, 1260, 1823
Bst4CI ACNGT 4 cut(s) 39, 197, 662, 1444
BstBAI YACGTR 1 cut(s) 247
BstC8I GCNNGC 5 cut(s) 79, 591, 882, 1216, 1372
BstDEI CTNAG 3 cut(s) 183, 613, 687
BstF5I GGATG 7 cut(s) 278, 445, 743, 938, 1109, 1184, 1743
BstHHI GCGC 2 cut(s) 721, 880
BstKTI GATC 3 cut(s) 634, 916, 1472
BstMBI GATC 3 cut(s) 631, 913, 1469
BstNI CCWGG 5 cut(s) 269, 294, 677, 1260, 1823
BstNSI RCATGY 4 cut(s) 984, 1044, 1195, 1540
BstSCI CCNGG 5 cut(s) 267, 292, 675, 1258, 1821
BstSFI CTRYAG 2 cut(s) 699, 792
BstSLI GKGCMC 1 cut(s) 1536
BstX2I RGATCY 1 cut(s) 1469
BstYI RGATCY 1 cut(s) 1469
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 6 cut(s) 112, 523, 609, 871, 1489, 1820
BsuTUI ATCGAT 1 cut(s) 138
BtgZI GCGATG 1 cut(s) 719
BtrI CACGTC 1 cut(s) 1678
BtsCI GGATG 7 cut(s) 278, 445, 743, 938, 1109, 1184, 1743
BtsI GCAGTG 1 cut(s) 392
BtsIMutI CAGTG 4 cut(s) 336, 392, 1113, 1725
BveI ACCTGC 2 cut(s) 138, 658
Cac8I GCNNGC 5 cut(s) 79, 591, 882, 1216, 1372
CaiI CAGNNNCTG 1 cut(s) 293
CfoI GCGC 2 cut(s) 721, 880
Cfr10I RCCGGY 1 cut(s) 559
Cfr13I GGNCC 6 cut(s) 265, 313, 522, 608, 1488, 1819
ClaI ATCGAT 1 cut(s) 138
CseI GACGC 1 cut(s) 729
Csp6I GTAC 5 cut(s) 647, 773, 779, 1189, 1250
CspAI ACCGGT 1 cut(s) 559
CviAII CATG 6 cut(s) 716, 981, 1041, 1192, 1537, 1885
CviQI GTAC 5 cut(s) 647, 773, 779, 1189, 1250
DdeI CTNAG 3 cut(s) 183, 613, 687
DpnI GATC 3 cut(s) 633, 915, 1471
DpnII GATC 3 cut(s) 631, 913, 1469
DrdI GACNNNNNNGTC 2 cut(s) 263, 1363
DseDI GACNNNNNNGTC 2 cut(s) 263, 1363
Eco130I CCWWGG 2 cut(s) 107, 761
Eco147I AGGCCT 2 cut(s) 112, 871
Eco24I GRGCYC 1 cut(s) 182
Eco47I GGWCC 2 cut(s) 265, 313
Eco57I CTGAAG 3 cut(s) 223, 381, 1137
Eco72I CACGTG 1 cut(s) 247
EcoO109I RGGNCCY 2 cut(s) 608, 1488
EcoRI GAATTC 1 cut(s) 123
EcoRII CCWGG 5 cut(s) 267, 292, 675, 1258, 1821
EcoT14I CCWWGG 2 cut(s) 107, 761
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 2 cut(s) 107, 761
FaeI CATG 6 cut(s) 719, 984, 1044, 1195, 1540, 1888
FalI AAGNNNNNCTT 2 cut(s) 1419, 1451
FaqI GGGAC 1 cut(s) 299
FatI CATG 6 cut(s) 715, 980, 1040, 1191, 1536, 1884
FauI CCCGC 2 cut(s) 14, 1058
FauNDI CATATG 1 cut(s) 1225
FokI GGATG 7 cut(s) 265, 432, 730, 925, 1096, 1191, 1750
FriOI GRGCYC 1 cut(s) 182
FspAI RTGCGCAY 1 cut(s) 720
FspI TGCGCA 1 cut(s) 720
GlaI GCGC 2 cut(s) 720, 879
GsaI CCCAGC 3 cut(s) 789, 1483, 1532
GsuI CTGGAG 3 cut(s) 423, 624, 1242
HaeIII GGCC 6 cut(s) 112, 523, 609, 871, 1489, 1820
HapII CCGG 1 cut(s) 560
HgaI GACGC 1 cut(s) 729
HhaI GCGC 2 cut(s) 721, 880
Hin1II CATG 6 cut(s) 719, 984, 1044, 1195, 1540, 1888
Hin6I GCGC 2 cut(s) 719, 878
HinP1I GCGC 2 cut(s) 719, 878
HindIII AAGCTT 3 cut(s) 587, 1055, 1428
HinfI GANTC 9 cut(s) 135, 140, 189, 275, 341, 1564, 1579, 1759, 1852
HpaII CCGG 1 cut(s) 560
HphI GGTGA 2 cut(s) 746, 1432
Hpy166II GTNNAC 4 cut(s) 353, 865, 1328, 1644
Hpy188I TCNGA 2 cut(s) 186, 1851
Hpy188III TCNNGA 4 cut(s) 120, 996, 1073, 1856
Hpy8I GTNNAC 4 cut(s) 353, 865, 1328, 1644
HpyAV CCTTC 6 cut(s) 123, 563, 744, 758, 1177, 1502
HpyCH4III ACNGT 4 cut(s) 39, 197, 662, 1444
HpyCH4IV ACGT 3 cut(s) 246, 1677, 1842
HpyF3I CTNAG 3 cut(s) 183, 613, 687
HpySE526I ACGT 3 cut(s) 246, 1677, 1842
Hsp92II CATG 6 cut(s) 719, 984, 1044, 1195, 1540, 1888
HspAI GCGC 2 cut(s) 719, 878
Kzo9I GATC 3 cut(s) 631, 913, 1469
LmnI GCTCC 4 cut(s) 415, 499, 832, 1406
LweI GCATC 4 cut(s) 220, 947, 1401, 1786
MaeII ACGT 3 cut(s) 246, 1677, 1842
MaeIII GTNAC 4 cut(s) 25, 656, 976, 1680
MalI GATC 3 cut(s) 633, 915, 1471
MboI GATC 3 cut(s) 631, 913, 1469
MboII GAAGA 8 cut(s) 374, 743, 908, 947, 1199, 1464, 1492, 1559
MfeI CAATTG 1 cut(s) 318
MflI RGATCY 1 cut(s) 1469
MhlI GDGCHC 3 cut(s) 182, 215, 1536
MmeI TCCRAC 1 cut(s) 1787
MroXI GAANNNNTTC 1 cut(s) 139
MseI TTAA 6 cut(s) 666, 1170, 1242, 1283, 1397, 1418
MslI CAYNNNNRTG 1 cut(s) 626
MspA1I CMGCKG 2 cut(s) 683, 1412
MspI CCGG 1 cut(s) 560
MspR9I CCNGG 5 cut(s) 269, 294, 677, 1260, 1823
MunI CAATTG 1 cut(s) 318
Mva1269I GAATGC 1 cut(s) 951
MvaI CCWGG 5 cut(s) 269, 294, 677, 1260, 1823
NdeI CATATG 1 cut(s) 1225
NdeII GATC 3 cut(s) 631, 913, 1469
NheI GCTAGC 1 cut(s) 1214
NlaIII CATG 6 cut(s) 719, 984, 1044, 1195, 1540, 1888
NlaIV GGNNCC 4 cut(s) 167, 315, 610, 1490
NmuCI GTSAC 1 cut(s) 1680
NsbI TGCGCA 1 cut(s) 720
NspI RCATGY 4 cut(s) 984, 1044, 1195, 1540
PaqCI CACCTGC 1 cut(s) 138
PceI AGGCCT 2 cut(s) 112, 871
PciI ACATGT 2 cut(s) 1040, 1536
PcsI WCGNNNNNNNCGW 1 cut(s) 1674
PctI GAATGC 1 cut(s) 951
PdmI GAANNNNTTC 1 cut(s) 139
PfeI GAWTC 9 cut(s) 135, 140, 189, 275, 341, 1564, 1579, 1759, 1852
PflMI CCANNNNNTGG 1 cut(s) 451
PfoI TCCNGGA 1 cut(s) 267
PinAI ACCGGT 1 cut(s) 559
PmaCI CACGTG 1 cut(s) 247
PmlI CACGTG 1 cut(s) 247
Ppu21I YACGTR 1 cut(s) 247
PscI ACATGT 2 cut(s) 1040, 1536
PshBI ATTAAT 1 cut(s) 1418
Psp6I CCWGG 5 cut(s) 267, 292, 675, 1258, 1821
PspCI CACGTG 1 cut(s) 247
PspFI CCCAGC 3 cut(s) 785, 1479, 1528
PspGI CCWGG 5 cut(s) 267, 292, 675, 1258, 1821
PspN4I GGNNCC 4 cut(s) 167, 315, 610, 1490
PspPI GGNCC 6 cut(s) 265, 313, 522, 608, 1488, 1819
PstI CTGCAG 1 cut(s) 703
PstNI CAGNNNCTG 1 cut(s) 293
PsuI RGATCY 1 cut(s) 1469
PvuII CAGCTG 2 cut(s) 683, 1412
RsaI GTAC 5 cut(s) 648, 774, 780, 1190, 1251
RsaNI GTAC 5 cut(s) 647, 773, 779, 1189, 1250
RseI CAYNNNNRTG 1 cut(s) 626
SaqAI TTAA 6 cut(s) 666, 1170, 1242, 1283, 1397, 1418
Sau3AI GATC 3 cut(s) 631, 913, 1469
Sau96I GGNCC 6 cut(s) 265, 313, 522, 608, 1488, 1819
ScrFI CCNGG 5 cut(s) 269, 294, 677, 1260, 1823
SduI GDGCHC 3 cut(s) 182, 215, 1536
SfaNI GCATC 4 cut(s) 220, 947, 1401, 1786
SfcI CTRYAG 2 cut(s) 699, 792
SinI GGWCC 2 cut(s) 265, 313
SmiMI CAYNNNNRTG 1 cut(s) 626
SseBI AGGCCT 2 cut(s) 112, 871
SsiI CCGC 6 cut(s) 15, 21, 757, 1065, 1078, 1730
SspI AATATT 3 cut(s) 670, 1422, 1600
StuI AGGCCT 2 cut(s) 112, 871
StyD4I CCNGG 5 cut(s) 267, 292, 675, 1258, 1821
StyI CCWWGG 2 cut(s) 107, 761
TaaI ACNGT 4 cut(s) 39, 197, 662, 1444
TaiI ACGT 3 cut(s) 249, 1680, 1845
TaqI TCGA 7 cut(s) 98, 121, 133, 138, 192, 907, 1794
TaqII GACCGA 1 cut(s) 301
TatI WGTACW 4 cut(s) 772, 778, 1188, 1249
TauI GCSGC 1 cut(s) 1733
TfiI GAWTC 9 cut(s) 135, 140, 189, 275, 341, 1564, 1579, 1759, 1852
Tru1I TTAA 6 cut(s) 666, 1170, 1242, 1283, 1397, 1418
Tru9I TTAA 6 cut(s) 666, 1170, 1242, 1283, 1397, 1418
TscAI CASTG 4 cut(s) 343, 399, 1120, 1725
TseFI GTSAC 1 cut(s) 1680
Tsp45I GTSAC 1 cut(s) 1680
TspDTI ATGAA 3 cut(s) 45, 559, 757
TspRI CASTG 4 cut(s) 343, 399, 1120, 1725
Van91I CCANNNNNTGG 1 cut(s) 451
VpaK11BI GGWCC 2 cut(s) 265, 313
VspI ATTAAT 1 cut(s) 1418
XapI RAATTY 4 cut(s) 123, 490, 511, 989
XceI RCATGY 4 cut(s) 984, 1044, 1195, 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 1144
XmnI GAANNNNTTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.